BLASTX nr result

ID: Papaver27_contig00041917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00041917
         (395 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB41122.1| putative proteasome regulatory subunit [Arabidop...    56   6e-06
ref|XP_006366835.1| PREDICTED: 26S proteasome non-ATPase regulat...    55   8e-06
gb|ACU19140.1| unknown [Glycine max]                                   55   8e-06
ref|XP_002262921.1| PREDICTED: 26S proteasome non-ATPase regulat...    55   8e-06

>emb|CAB41122.1| putative proteasome regulatory subunit [Arabidopsis thaliana]
           gi|7269333|emb|CAB79392.1| putative proteasome
           regulatory subunit [Arabidopsis thaliana]
          Length = 406

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = +1

Query: 1   QVLLAPKILAVQGKMLYLSEFMNSLYHCRYKAFFRALGNFL 123
           +V+ AP+IL V GK+ +LSEF+NSLY C+YKAFF A G F+
Sbjct: 237 KVVDAPEILTVLGKIPFLSEFLNSLYECQYKAFFSAFGKFI 277


>ref|XP_006366835.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 homolog
           [Solanum tuberosum]
          Length = 386

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = +1

Query: 1   QVLLAPKILAVQGKMLYLSEFMNSLYHCRYKAFFRALGNFLVLLEQGSYHLKGPPSMLYR 180
           +V+ AP+IL V GK+ YLSEFMNSLY C+YK+FF A    +  ++   Y     P   Y 
Sbjct: 236 KVVDAPEILTVIGKIPYLSEFMNSLYECQYKSFFSAFAGLMEHIKLDRYL---QPHFRYY 292

Query: 181 IQKLSRVIY 207
           ++++  V+Y
Sbjct: 293 MREVRTVVY 301


>gb|ACU19140.1| unknown [Glycine max]
          Length = 384

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = +1

Query: 1   QVLLAPKILAVQGKMLYLSEFMNSLYHCRYKAFFRALGNFLVLLEQGSYHLKGPPSMLYR 180
           +V+ AP+ILAV GK+ YLSEF+NSLY C+YK+FF A   F  L EQ        P   Y 
Sbjct: 234 KVVDAPEILAVIGKIPYLSEFLNSLYDCQYKSFFSA---FAGLTEQIKLDRYLHPHFRYY 290

Query: 181 IQKLSRVIY 207
           ++++  V+Y
Sbjct: 291 MREVRTVVY 299


>ref|XP_002262921.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 6 [Vitis
           vinifera] gi|297733617|emb|CBI14864.3| unnamed protein
           product [Vitis vinifera]
          Length = 386

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = +1

Query: 1   QVLLAPKILAVQGKMLYLSEFMNSLYHCRYKAFFRALGNFLVLLEQGSYHLKGPPSMLYR 180
           +V+ AP+ILAV GK+ YLSEF+NSLY C+YK+FF A   F  L EQ        P   Y 
Sbjct: 236 KVVDAPEILAVIGKIPYLSEFLNSLYDCQYKSFFSA---FAGLAEQIKLDRYLHPHFRYY 292

Query: 181 IQKLSRVIY 207
           ++++  V+Y
Sbjct: 293 MREVRTVVY 301


Top