BLASTX nr result
ID: Papaver27_contig00041833
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00041833
(920 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 67 2e-24
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 80 2e-24
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 80 3e-24
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 67 2e-22
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 65 3e-22
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 70 4e-22
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali... 77 2e-21
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 64 2e-21
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 65 5e-21
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 70 1e-19
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 59 2e-19
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 62 2e-19
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 60 6e-19
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 54 3e-18
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 57 4e-18
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 74 1e-17
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 59 1e-17
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali... 59 2e-17
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 66 3e-17
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 66 3e-17
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 67.0 bits (162), Expect(3) = 2e-24
Identities = 33/110 (30%), Positives = 62/110 (56%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD+L+F GD S +L+ + + L + ++ +F + V+ + +++ + +
Sbjct: 527 DDLLMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSL 586
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G PV+Y ++DC PL+D++ +RI+SW++K LS+AGRL LI
Sbjct: 587 GTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLI 636
Score = 53.9 bits (128), Expect(3) = 2e-24
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWSMKCP 2
GL ++D+ NKA + H+W+LV+ ++ WTDW+K ++K +FW+ P
Sbjct: 695 GLGIKDLHCWNKALMISHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLP 744
Score = 38.9 bits (89), Expect(3) = 2e-24
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = -3
Query: 300 YWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
YW S ILPK V+K + + F+W G + +A ++WS+IC EG
Sbjct: 646 YWASHLILPKKVLKDIEKRLRCFLWAG-NCSGRAATKVAWSEICLPKCEG 694
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 80.1 bits (196), Expect(3) = 2e-24
Identities = 40/110 (36%), Positives = 64/110 (58%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD++VF G +S + + ++ + + L +S EK++L+ + V+E+N NI+S
Sbjct: 278 DDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFAS 337
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G++PV+Y D PL+DKV S+I SW ++ LSYAGRL LI
Sbjct: 338 GQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALI 387
Score = 40.0 bits (92), Expect(3) = 2e-24
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -3
Query: 300 YWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
+W+S + LP IK + + F+W G +L+ K I+W+ +C EG
Sbjct: 397 FWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPK-KAKITWTSLCKLKQEG 445
Score = 39.7 bits (91), Expect(3) = 2e-24
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWS 14
GL ++ + NK + ++ +W LV+ +S+W +W+ II+ +FWS
Sbjct: 446 GLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWS 491
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 79.7 bits (195), Expect(3) = 3e-24
Identities = 40/110 (36%), Positives = 63/110 (57%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD++VF G +S + + + + + L +S EK++L+ + V+E+N NI+S
Sbjct: 847 DDLMVFIDGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFAS 906
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G++PV+Y D PL+DKV S+I SW ++ LSYAGRL LI
Sbjct: 907 GQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALI 956
Score = 40.0 bits (92), Expect(3) = 3e-24
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -3
Query: 300 YWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
+W+S + LP IK + + F+W G +L+ K I+W+ +C EG
Sbjct: 966 FWMSAYRLPAGCIKEIEKLCSAFLWSGPELNPK-KAKITWTSLCKLKQEG 1014
Score = 39.7 bits (91), Expect(3) = 3e-24
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWS 14
GL ++ + NK + ++ +W LV+ +S+W +W+ II+ +FWS
Sbjct: 1015 GLGIKSLLEANKVSCLKLIWRLVSRQSSLWVNWVWTYIIRKGSFWS 1060
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 67.4 bits (163), Expect(3) = 2e-22
Identities = 34/110 (30%), Positives = 64/110 (58%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD+++ G ++S + V+ + + L ++ EKT+L+ + V++ N +IS G+
Sbjct: 110 DDLMILTDGKVRSVDGIVEVMNLFAKRSGLQINMEKTTLYTAGVSDHNRYMMISRYPFGL 169
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G++PV+Y +D PL +++ +RI +W S++LS+AGRL LI
Sbjct: 170 GQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLI 219
Score = 45.4 bits (106), Expect(3) = 2e-22
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = -3
Query: 315 WHGFFYWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
W +W+S F LP +K +NSI F+W G +L ++ +SW IC EG
Sbjct: 224 WSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELHRR-KAKVSWDDICKPKQEG 277
Score = 40.4 bits (93), Expect(3) = 2e-22
Identities = 14/47 (29%), Positives = 29/47 (61%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWSM 11
GL +R + N + ++ +W + ++ +S+W W K N++K +FWS+
Sbjct: 278 GLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSL 324
>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1115
Score = 65.5 bits (158), Expect(3) = 3e-22
Identities = 33/110 (30%), Positives = 63/110 (57%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD+++ G ++S + V+ + + L ++ EKT+L+ + V++ N +IS G+
Sbjct: 622 DDLMILTDGKVRSVDGIVEVMNLFAKRSGLKINMEKTTLYTAGVSDHNRHMMISRYPFGL 681
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
++PV+Y +D PL +++ +RI +W S++LS+AGRL LI
Sbjct: 682 AQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLI 731
Score = 44.7 bits (104), Expect(3) = 3e-22
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = -3
Query: 315 WHGFFYWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQIC 169
W +W+S F LP +K +NSI F+W G +L+++ +SW IC
Sbjct: 736 WSTMNFWMSAFRLPSACLKEINSICSAFLWSGPELNRR-KAKVSWDDIC 783
Score = 42.4 bits (98), Expect(3) = 3e-22
Identities = 15/48 (31%), Positives = 30/48 (62%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWSMK 8
GL +R + N + ++ +W + ++ +S+W W K N++K +FWS+K
Sbjct: 789 GLGLRSLTEANVVSVLKLIWRVTSNDDSLWVKWSKMNLLKQESFWSLK 836
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 69.7 bits (169), Expect(3) = 4e-22
Identities = 37/110 (33%), Positives = 62/110 (56%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD+++ G ++S + V+ Q +A L + EKT+L+ + V++ + + + S GV
Sbjct: 426 DDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGV 485
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G++PV+Y D PLID++ RI W S++LS+AGRL LI
Sbjct: 486 GKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLSFAGRLSLI 535
Score = 42.0 bits (97), Expect(3) = 4e-22
Identities = 14/47 (29%), Positives = 31/47 (65%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWSM 11
GL ++ ++ NK + ++ +W L++ +S+W W + N++K +FWS+
Sbjct: 594 GLGLQSLREANKVSSLKLIWRLLSCQDSLWVKWTRMNLLKKESFWSI 640
Score = 40.4 bits (93), Expect(3) = 4e-22
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -3
Query: 315 WHGFFYWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
W +W++ F LP+ I +N I +W G +L+ K +SW +IC EG
Sbjct: 540 WSITNFWMNAFRLPRECINEINRISSALLWSGPELNPK-KAKVSWDEICKPKKEG 593
>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197043|gb|AAM14892.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 1412
Score = 76.6 bits (187), Expect(3) = 2e-21
Identities = 39/120 (32%), Positives = 67/120 (55%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD++VF G S + + + +A + L++S EK++LF + ++ +I++
Sbjct: 960 DDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDS 1019
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLIIFFVNGMVFF 300
G +PV+Y L DC PL++K+ SRI SWK++ LSYAGRL L+ ++ + F
Sbjct: 1020 GSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKF 1079
Score = 38.5 bits (88), Expect(3) = 2e-21
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -3
Query: 300 YWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
+W+S F LP+ I+ + I F+W G DL+ ++W +C +EG
Sbjct: 1079 FWISAFRLPRACIREIEQISAAFLWSGTDLNPH-KAKVAWHDVCKPKSEG 1127
Score = 35.0 bits (79), Expect(3) = 2e-21
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIK 32
GL +R + NK + +W LV+ +S+W +WI+ N+I+
Sbjct: 1128 GLGLRSLVDANKICCFKLIWRLVSAKHSLWVNWIQNNLIR 1167
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 64.3 bits (155), Expect(3) = 2e-21
Identities = 34/110 (30%), Positives = 60/110 (54%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD++VF G +S + ++ +A + L +S EK+++F + ++ +I+ +
Sbjct: 852 DDIMVFSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFEL 911
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G +PVKY D PL++K+ +RI SW ++ LS+AGRL LI
Sbjct: 912 GTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLI 961
Score = 47.4 bits (111), Expect(3) = 2e-21
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = -3
Query: 300 YWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
+WLS F LPK ++ + +F F+W G DL+ K I+WS++C EG
Sbjct: 971 FWLSVFRLPKACLQEIEKMFSAFLWSGPDLNTK-KAKIAWSEVCKLKEEG 1019
Score = 38.5 bits (88), Expect(3) = 2e-21
Identities = 12/48 (25%), Positives = 31/48 (64%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWSMK 8
GL ++ ++ N+ + ++ +W +++ +S+W W+ ++I+ FWS+K
Sbjct: 1020 GLGLKPLKEANEVSLLKLIWRILSARDSLWVKWVNKHLIRKETFWSVK 1067
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 64.7 bits (156), Expect(3) = 5e-21
Identities = 37/110 (33%), Positives = 56/110 (50%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD+L+F RGD S + + S +T L V+ +K SL + ++ V R I+
Sbjct: 76 DDLLLFSRGDKISVGMMMRAYESFSKATGLLVNPQKCSLLCAGIDAVTKREILEVSGFQE 135
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G++P KY PLIDK+ +I+ W ++ LSYAGRL L+
Sbjct: 136 GQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQLV 185
Score = 45.4 bits (106), Expect(3) = 5e-21
Identities = 17/45 (37%), Positives = 29/45 (64%)
Frame = -3
Query: 300 YWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICA 166
YWL+CF PK+V++ + +I + F+W G + P++W QIC+
Sbjct: 195 YWLNCFPFPKSVLQKIEAICRIFLWTGG-FEGSRKSPVAWKQICS 238
Score = 38.5 bits (88), Expect(3) = 5e-21
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIK 32
GL + DI I NKA M+ +W+L + +S+W WI+A +K
Sbjct: 244 GLNIIDIDIWNKANLMKLLWNLSSKEDSLWVKWIQAYYVK 283
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 70.1 bits (170), Expect(3) = 1e-19
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DDVL+F RGD+ S + VI + SA+T L V+ K ++ V+ I
Sbjct: 518 DDVLLFCRGDVMSVEMMLHVINKFSATTGLVVNPNKCRIYFGGVDGTTKNKIQQISSYEE 577
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLIIFFVNGMV-F 303
G++PV+Y +K PLIDK+T+RIR W SK L+ GR+ ++ + +V F
Sbjct: 578 GQLPVRYLGVPLTSKKLNIKYYLPLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQF 637
Query: 302 FTGCLAL 282
+ CL +
Sbjct: 638 WMQCLPI 644
Score = 41.2 bits (95), Expect(3) = 1e-19
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = -3
Query: 300 YWLSCFILPKNVIKCLNSIFKRFVWD-GADLDKKANCPISWSQICAFYNEGVWKLGIFRL 124
+W+ C +P +VIK ++S+ + FVW ++ +K+ PI+W+ +C +G L IF L
Sbjct: 637 FWMQCLPIPMSVIKKIDSMCRSFVWSRSTEITRKS--PIAWNSVCRPKGQG--GLNIFNL 692
Score = 32.7 bits (73), Expect(3) = 1e-19
Identities = 11/41 (26%), Positives = 25/41 (60%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKD 29
GL + ++++ N + +W+L ++++W WI A+ IK+
Sbjct: 686 GLNIFNLKVWNHITVLNCLWNLCKKVDNLWVKWIHAHYIKN 726
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 58.9 bits (141), Expect(3) = 2e-19
Identities = 32/110 (29%), Positives = 56/110 (50%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD+++ G +S + V S + L +S EK+++F + ++ + + + V
Sbjct: 258 DDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQLHTHFPFEV 317
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
GE+P++Y D PLI+++ RI SW S+ LS+AGR LI
Sbjct: 318 GELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLI 367
Score = 45.4 bits (106), Expect(3) = 2e-19
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = -3
Query: 315 WHGFFYWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
W +WLS F LP+ I+ + + F+W G +L+ K ISW+Q+C +EG
Sbjct: 372 WSSCNFWLSAFQLPRACIQEIEKLCSSFLWSGTNLNSK-KAKISWNQVCKPKSEG 425
Score = 38.9 bits (89), Expect(3) = 2e-19
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWSMK 8
GL +R ++ N ++ VW +++ +S+W W++ N++K FW +K
Sbjct: 426 GLGLRSLKEANDVCCLKLVWRIISHGDSLWVKWVEHNLLKREIFWIVK 473
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 60.8 bits (146), Expect(3) = 2e-19
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD++V G ++S + V + + + L +S EK++++ + ++ +
Sbjct: 705 DDLMVLSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSS 764
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G++PV+Y DC PL+++V RI SW S+ LSYAGRL LI
Sbjct: 765 GQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLI 814
Score = 42.7 bits (99), Expect(3) = 2e-19
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWSMK 8
GL +R ++ N ++ VW +V+ NS+W W+ +++++ +FW +K
Sbjct: 873 GLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVK 920
Score = 39.3 bits (90), Expect(3) = 2e-19
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 315 WHGFFYWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
W +WL+ F LP+ I+ L + F+W G +++ ISW +C +EG
Sbjct: 819 WSICNFWLAAFRLPRKCIRELEKMCSAFLWSGTEMNSN-KAKISWHMVCKPKDEG 872
Score = 62.4 bits (150), Expect = 2e-07
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = -2
Query: 868 ITLSEEDMLNLSRPVTRDEVVISLSSIGSNKAPGPDGFSSWFFKFCRSILGDDFTAAVQN 689
+ S+ D +L RPVT +E+ L + S+K+PGPDG++S FFK I+GD+FT AVQ+
Sbjct: 439 VRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQS 498
Query: 688 FF 683
FF
Sbjct: 499 FF 500
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 59.7 bits (143), Expect(3) = 6e-19
Identities = 31/110 (28%), Positives = 59/110 (53%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD++V G ++S + V + + + L +S EK++++ + ++ + + +++ V
Sbjct: 87 DDLMVLSDGKVRSIEGIVEVFETFAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAV 146
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G +PV+Y D PLI+ + +I SW ++ LSYAGRL LI
Sbjct: 147 GTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLSYAGRLNLI 196
Score = 43.1 bits (100), Expect(3) = 6e-19
Identities = 13/48 (27%), Positives = 32/48 (66%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWSMK 8
GL +R ++ N + ++ +W +++ +S+W WI A ++K ++FW+++
Sbjct: 255 GLGLRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLKQVSFWAVR 302
Score = 38.5 bits (88), Expect(3) = 6e-19
Identities = 15/55 (27%), Positives = 30/55 (54%)
Frame = -3
Query: 315 WHGFFYWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
W +W+ F LP+ I+ ++ + ++W G DL+ + I+W+ +C +EG
Sbjct: 201 WSICNFWMGAFRLPRECIREIDKMCSAYLWSGGDLN-TSKAKIAWTDVCKPKDEG 254
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 54.3 bits (129), Expect(3) = 3e-18
Identities = 31/123 (25%), Positives = 60/123 (48%)
Frame = -1
Query: 668 AQGDDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD 489
A DD+++F+ G S + +V++ + L+++ EK++++ + + + + + ++
Sbjct: 695 AFADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTLA-FG 753
Query: 488 *GVGEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLIIFFVNGM 309
G P +Y D LIDK+ +R W +K LS+AGRL LI +
Sbjct: 754 FVNGTFPFRYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYST 813
Query: 308 VFF 300
V F
Sbjct: 814 VNF 816
Score = 43.9 bits (102), Expect(3) = 3e-18
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = -3
Query: 300 YWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
+WLS FILPK +K + + RF+W G D+ ++ + +SW C EG
Sbjct: 816 FWLSSFILPKCCLKTIEQMCNRFLW-GNDITRRGDIKVSWQNSCLPKAEG 864
Score = 40.8 bits (94), Expect(3) = 3e-18
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWS 14
GL +R+ NK +R +W L A +S+W W AN ++ +NFW+
Sbjct: 865 GLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFWN 910
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 57.4 bits (137), Expect(3) = 4e-18
Identities = 32/110 (29%), Positives = 57/110 (51%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD++V G ++S + V + + L +S EK++++ + V E I + V
Sbjct: 232 DDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDV 291
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G++PV+Y D PL++ + +I +W +++LSYAGRL LI
Sbjct: 292 GQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLI 341
Score = 42.0 bits (97), Expect(3) = 4e-18
Identities = 15/48 (31%), Positives = 31/48 (64%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWSMK 8
GL +R ++ N+ + ++ +W +V+ NS+W WI+ ++K FWS++
Sbjct: 400 GLGLRSLKEMNEVSCLKLIWRIVSHTNSLWVRWIEQYLLKHDTFWSVQ 447
Score = 39.3 bits (90), Expect(3) = 4e-18
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = -3
Query: 315 WHGFFYWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
W +WL+ F LP+ I+ ++ I F+W G DL+ + + W +C EG
Sbjct: 346 WSICNFWLAAFRLPRECIREIDKICSAFLWSGPDLNPR-KTRVCWGDVCKPKQEG 399
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 73.6 bits (179), Expect(3) = 1e-17
Identities = 37/117 (31%), Positives = 64/117 (54%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD+L+F R D S +N Q+ S ++ L S EK++++ V++ R + + +
Sbjct: 690 DDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQL 749
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLIIFFVNGM 309
GE+P +Y C+PL++ +T+R ++W +K LSYAGRL LI ++ M
Sbjct: 750 GELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSM 806
Score = 37.4 bits (85), Expect(3) = 1e-17
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 300 YWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEGVWKL 139
YW F L K VI+ + + ++F+W G + K P++W+ I + G W +
Sbjct: 809 YWAHIFPLSKKVIQAVEKVCRKFLWTGKTEETK-KAPVAWATIQRPKSRGGWNV 861
Score = 25.8 bits (55), Expect(3) = 1e-17
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIK 32
G V +++ N+AA ++ +W + + +W WI + IK
Sbjct: 858 GWNVINMKYWNRAAMLKLLWAIEFKRDKLWVRWIHSYYIK 897
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 59.3 bits (142), Expect(3) = 1e-17
Identities = 30/110 (27%), Positives = 56/110 (50%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD++V G L+S + V + + L +S KT+++ + +++ + V
Sbjct: 223 DDIMVLTDGKLRSLEGIVEVFDSFAKQSGLKISMAKTTIYFAGISKSVCKEFEDQFHFAV 282
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G +PV+Y +D PL++++ RI +W ++ LSYAGRL L+
Sbjct: 283 GRLPVRYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTARFLSYAGRLNLV 332
Score = 39.3 bits (90), Expect(3) = 1e-17
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWSMK 8
GL ++ I+ N ++ +W +V+ +S+W WI+ ++K FWS +
Sbjct: 391 GLGLQSIKEANDVCCLKLIWRIVSQGDSLWVQWIRTYLLKRNTFWSFR 438
Score = 38.1 bits (87), Expect(3) = 1e-17
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -3
Query: 315 WHGFFYWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
W +WLS F LP+ ++ ++ + F+W G +L I+W +C EG
Sbjct: 337 WSICNFWLSAFRLPRECVREIDKLCSAFLWSGPELSTN-KAKIAWETVCRPKREG 390
>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 59.3 bits (142), Expect(3) = 2e-17
Identities = 32/110 (29%), Positives = 55/110 (50%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD++V G ++S + V + + L +S EK++++ + ++ + +I V
Sbjct: 35 DDLMVLSDGKVRSIEGIVDVFDTFAKCSDLKISMEKSTVYLAGLSHTTRQEVIDRFSFAV 94
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
G +PV+Y D PLID + +I SW ++ LSY GRL LI
Sbjct: 95 GTLPVRYLGLPLVTKQFSSTDYLPLIDHIKQKICSWSARFLSYTGRLNLI 144
Score = 40.8 bits (94), Expect(3) = 2e-17
Identities = 12/48 (25%), Positives = 32/48 (66%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFWSMK 8
GL +R ++ N ++ +W +++ +S+W WI+++++K + FW+++
Sbjct: 203 GLGLRSLKEANDVCCLKLIWRIISHADSLWVKWIQSSLLKKVFFWAVR 250
Score = 35.8 bits (81), Expect(3) = 2e-17
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = -3
Query: 315 WHGFFYWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISWSQICAFYNEG 151
W +W+ F LP++ I+ ++ + ++W G +L+ + I+W+ +C EG
Sbjct: 149 WSICNFWMGAFRLPRDCIREIDKMCSAYLWSGGELN-TSKAKIAWAFVCKPKEEG 202
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 66.2 bits (160), Expect(3) = 3e-17
Identities = 36/122 (29%), Positives = 57/122 (46%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD+L+F R D S S + S ++ L S EK+ ++ V + + +
Sbjct: 693 DDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPI 752
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLIIFFVNGMVFF 300
G +P +Y C+PLIDK+T+R + W + LSYAGRL L+ + M +
Sbjct: 753 GSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNY 812
Query: 299 TG 294
G
Sbjct: 813 WG 814
Score = 36.2 bits (82), Expect(3) = 3e-17
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -3
Query: 300 YWLSCFILPKNVIKCLNSIFKRFVWDGADLDKKANCPISW 181
YW F LPK +IK + + ++F+W G +D P++W
Sbjct: 812 YWGQIFPLPKKLIKAVETTCRKFLWTGT-VDTSYKAPVAW 850
Score = 33.1 bits (74), Expect(3) = 3e-17
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMN 23
GL V ++ + NKAA ++ +W + + +W W+ A IK N
Sbjct: 861 GLNVTNMVLWNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQN 903
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 65.9 bits (159), Expect(3) = 3e-17
Identities = 39/110 (35%), Positives = 56/110 (50%)
Frame = -1
Query: 659 DDVLVFFRGDLQSASSLNTVIQQLSASTRLDVSKEKTSLFHSVVNEVNLRNIISCLD*GV 480
DD+L+F RGDL S +L + S ++ L + K+S++ V + II L +
Sbjct: 498 DDLLLFSRGDLNSIKALQKCFTEFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTI 557
Query: 479 GEIPVKYXXXXXXXXXXXLKDCQPLIDKVTSRIRSWKSKHLSYAGRLLLI 330
E+P KY PLI+KV +RI SW +K LSYAGR L+
Sbjct: 558 EELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQLV 607
Score = 35.8 bits (81), Expect(3) = 3e-17
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -3
Query: 297 WLSCFILPKNVIKCLNSIFKRFVWDGAD-LDKKANCPISWSQICAFYNEGVWKLGIFRL 124
W FI+P +IK + + + ++W G + KKA I+W ++C+ EG LG+ L
Sbjct: 618 WAQLFIIPAKIIKLIEGLCRSYLWSGVGYVTKKA--LIAWDKVCSPKYEG--GLGLINL 672
Score = 33.9 bits (76), Expect(3) = 3e-17
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 151 GLEVRDIQITNKAAGMRHVWDLVADINSVWTDWIKANIIKDMNFW 17
GL + +++I N++A + WDL + +W WI A IK W
Sbjct: 666 GLGLINLKIWNRSAVTKLCWDLANKEDKLWIKWIHAYYIKGQREW 710