BLASTX nr result
ID: Papaver27_contig00040156
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00040156
(769 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98150.1| retrotransposon protein, putative, Ty3-gypsy subc... 100 1e-18
gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subc... 96 1e-17
emb|CAE04051.2| OSJNBb0062B06.9 [Oryza sativa Japonica Group] 96 1e-17
emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group] gi... 96 1e-17
emb|CAH68033.1| OSIGBa0139N19-OSIGBa0137L10.2 [Oryza sativa Indi... 96 1e-17
gb|AAS07216.1| putative retrotransposon gag protein [Oryza sativ... 96 1e-17
gb|AAP21433.1| putative polyprotein [Oryza sativa Japonica Group... 96 1e-17
emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group] 96 2e-17
gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subc... 96 2e-17
emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group] 96 2e-17
emb|CAE01541.2| OSJNBa0033G05.1 [Oryza sativa Japonica Group] gi... 95 2e-17
gb|ABF95987.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 4e-17
emb|CAH66314.1| OSIGBa0115J08.1 [Oryza sativa Indica Group] gi|1... 94 5e-17
emb|CAE05045.2| OSJNBa0049H08.6 [Oryza sativa Japonica Group] 94 5e-17
gb|ABA95262.1| retrotransposon protein, putative, Ty3-gypsy subc... 94 7e-17
gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group... 93 1e-16
emb|CAD41625.1| OSJNBa0091D06.10 [Oryza sativa Japonica Group] 93 1e-16
gb|AAX93001.1| retrotransposon protein, putative, Ty3-gypsy sub-... 92 2e-16
emb|CAE04482.1| OSJNBa0029L02.23 [Oryza sativa Japonica Group] 92 2e-16
gb|AAM74296.1|AC083944_14 Putative retroelement [Oryza sativa Ja... 92 3e-16
>gb|ABA98150.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1480
Score = 99.8 bits (247), Expect = 1e-18
Identities = 69/245 (28%), Positives = 107/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 184 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNKLKQGNS 243
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ + + +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 244 SVNEYLSMFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 303
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ PS+ V RP GQP Q S ++
Sbjct: 304 EDAR----------------KEATEEYKKRKSNHQGNPSRGVPRPRYGQPMQYHQSVTQA 347
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS + C+ C + GH
Sbjct: 348 NRQPGYAPRPQMNRP---APQPQQCAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYA 404
Query: 700 RNFPQ 714
R PQ
Sbjct: 405 RQCPQ 409
>gb|ABA99634.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1851
Score = 96.3 bits (238), Expect = 1e-17
Identities = 67/245 (27%), Positives = 107/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 463 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFAAAFRAAHVPESTIDMKKEEFNRLKQGHS 522
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ +++ +L+RYAPE + D+K R+FL+ + + +L TFQ +++ +
Sbjct: 523 SVNEYLSQFNKLARYAPEEVNTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 582
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ S+ RP GQP Q S ++
Sbjct: 583 EDAR----------------KEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQT 626
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS + C+ C + GH
Sbjct: 627 NRQPGYAPRPQINRP---APQPQKHAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYA 683
Query: 700 RNFPQ 714
R PQ
Sbjct: 684 RQCPQ 688
>emb|CAE04051.2| OSJNBb0062B06.9 [Oryza sativa Japonica Group]
Length = 1680
Score = 95.9 bits (237), Expect = 1e-17
Identities = 66/245 (26%), Positives = 107/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 459 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNN 518
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ +++ +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 519 SVNEYLSQFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 578
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTSMP---SQTVFRPS-GQPWQMG-SASRL 519
E + E + Y+++ ++ S+ RP GQP Q S ++
Sbjct: 579 EDARK----------------EATEEYRKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 622
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P+ PS + C+ C + GH
Sbjct: 623 NRQPGYAPRPQMNRPT---PQPQQRAPSGNTAPNSVTSFKSPLGPSAVQCFRCNQMGHYA 679
Query: 700 RNFPQ 714
R PQ
Sbjct: 680 RQCPQ 684
>emb|CAE04240.1| OSJNBa0089N06.1 [Oryza sativa Japonica Group]
gi|57834090|emb|CAE04759.2| OSJNBb0060E08.22 [Oryza
sativa Japonica Group]
Length = 1851
Score = 95.9 bits (237), Expect = 1e-17
Identities = 68/245 (27%), Positives = 107/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 463 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFATAFRVAHVPESTIDMKKEEFNRLKQGHS 522
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ +++ +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 523 SVNEYLSQFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 582
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ S+ RP GQP Q S ++
Sbjct: 583 EDAR----------------KEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 626
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
SS RP RP P Q P G P PS + C+ C + GH
Sbjct: 627 NRQSSYAPRPQMNRP---APPPQQRAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYA 683
Query: 700 RNFPQ 714
R PQ
Sbjct: 684 RQCPQ 688
>emb|CAH68033.1| OSIGBa0139N19-OSIGBa0137L10.2 [Oryza sativa Indica Group]
Length = 1680
Score = 95.9 bits (237), Expect = 1e-17
Identities = 66/245 (26%), Positives = 107/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 459 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNN 518
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ +++ +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 519 SVNEYLSQFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 578
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTSMP---SQTVFRPS-GQPWQMG-SASRL 519
E + E + Y+++ ++ S+ RP GQP Q S ++
Sbjct: 579 EDARK----------------EATEEYRKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 622
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P+ PS + C+ C + GH
Sbjct: 623 NRQPGYAPRPQMNRPT---PQPQQRAPSGNTAPNSVTSFKSPLGPSAVQCFRCNQMGHYA 679
Query: 700 RNFPQ 714
R PQ
Sbjct: 680 RQCPQ 684
>gb|AAS07216.1| putative retrotransposon gag protein [Oryza sativa Japonica Group]
Length = 660
Score = 95.9 bits (237), Expect = 1e-17
Identities = 68/245 (27%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 184 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNS 243
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ + + +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 244 SVNEYLSMFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 303
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ S+ V RP GQP Q S ++
Sbjct: 304 EDAR----------------KEATEEYKKRKSNHQGNSSRGVPRPRYGQPMQYHQSVTQA 347
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS + C+ C + GH
Sbjct: 348 NHQPGYAPRPQMNRP---APQPQQRAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYA 404
Query: 700 RNFPQ 714
R PQ
Sbjct: 405 RQCPQ 409
>gb|AAP21433.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108711644|gb|ABF99439.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1382
Score = 95.9 bits (237), Expect = 1e-17
Identities = 68/245 (27%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 184 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNS 243
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ + + +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 244 SVNEYLSMFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 303
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ S+ V RP GQP Q S ++
Sbjct: 304 EDAR----------------KEATEEYKKRKSNHQGNSSRGVPRPRYGQPMQYHQSVTQA 347
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS + C+ C + GH
Sbjct: 348 NHQPGYAPRPQMNRP---APQPQQRAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYA 404
Query: 700 RNFPQ 714
R PQ
Sbjct: 405 RQCPQ 409
>emb|CAH67121.1| H0502G05.12 [Oryza sativa Indica Group]
Length = 1877
Score = 95.5 bits (236), Expect = 2e-17
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 489 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNS 548
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ +++ +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 549 SINEYLSQFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 608
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTSMP---SQTVFRPS-GQPWQMG-SASRL 519
E + E + YK++ ++ S+ RP GQP Q S ++
Sbjct: 609 EDARK----------------EATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 652
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS + C+ C + GH
Sbjct: 653 NRQPGYAPRPQINRP---APQPQQRAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYA 709
Query: 700 RNFPQ 714
R PQ
Sbjct: 710 RQCPQ 714
>gb|ABF93914.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1776
Score = 95.5 bits (236), Expect = 2e-17
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 388 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGHS 447
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ +++ +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 448 SVNEYLSQFNKLARYAPEEVDTDKKKIRKFLKEIAVGMRLQLLAHDFPTFQHMINKALLL 507
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ S+ RP GQP Q S ++
Sbjct: 508 EDAR----------------KEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 551
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS + C+ C + GH
Sbjct: 552 NRQPGYAPRPQINRP---APQPQKHAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYA 608
Query: 700 RNFPQ 714
R PQ
Sbjct: 609 RQCPQ 613
>emb|CAE03019.3| OSJNBa0091D06.9 [Oryza sativa Japonica Group]
Length = 1762
Score = 95.5 bits (236), Expect = 2e-17
Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 464 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNS 523
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ +++ +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 524 SINEYLSQFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 583
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ S+ RP GQP Q S ++
Sbjct: 584 EDAR----------------KEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 627
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS + C+ C + GH
Sbjct: 628 NRQPGYAPRPQINRP---APQPQQRAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYA 684
Query: 700 RNFPQ 714
R PQ
Sbjct: 685 RQCPQ 689
>emb|CAE01541.2| OSJNBa0033G05.1 [Oryza sativa Japonica Group]
gi|38347324|emb|CAE05974.2| OSJNBa0063C18.15 [Oryza
sativa Japonica Group]
Length = 1764
Score = 95.1 bits (235), Expect = 2e-17
Identities = 68/245 (27%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 463 ASHQLRGPAADWWENYCNAHPEPTSIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNS 522
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ + + +L+RYAPE +D+K R+FL+ + + +L TFQ +++ +
Sbjct: 523 SVNEYLSMFNKLARYAPEEVDSDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 582
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ S+ RP GQP Q S ++
Sbjct: 583 EDAR----------------KEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 626
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS I C+ C + GH
Sbjct: 627 NRQPGYAPRPQMNRP---APQPQQRAPSGNTAPNSVTSFKSPQGPSAIQCFRCNQMGHYA 683
Query: 700 RNFPQ 714
R PQ
Sbjct: 684 RQCPQ 688
>gb|ABF95987.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1273
Score = 94.4 bits (233), Expect = 4e-17
Identities = 74/253 (29%), Positives = 110/253 (43%), Gaps = 9/253 (3%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELT--ESEPISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A +LQG T WW+ + T E +PI+W RF F + V K+ EF ++ G
Sbjct: 406 AAHQLQGPTSLWWDHFQATQPEGQPITWARFTAAFRRTHVPAGVVALKKREFRELKQGNR 465
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S++E+ +++ L+RYAPE DE+ +FL + P++S RL FQ + + +
Sbjct: 466 SVMEYLHEFNNLARYAPEDVREDEEKQEKFLAGMDPELSVRLVSGDYPDFQRLVDKSIRL 525
Query: 355 E---KEEESRIT*QERRSEPQKLQELQDSYKRQMTSMPSQTVFRPSGQPWQMGSASRLAP 525
E KE ES +RR + Q+ + R P PS Q Q R AP
Sbjct: 526 EAKHKELES----HKRRLANFRNQQGANQRVRYTNPYPG----GPSSQQQQQQQQPRSAP 577
Query: 526 SSSVQSRPSFV----RPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGH 693
RP FV +P + Q T P+ Q V + +C+ C EPGH
Sbjct: 578 ------RPQFVVRVPQPQPQQNQQGTRAPRPPAPAVQPVQGRRDAQGQQRLCFNCFEPGH 631
Query: 694 TRRNFPQLQRADS 732
P+ +R S
Sbjct: 632 FADKCPKPRRQQS 644
>emb|CAH66314.1| OSIGBa0115J08.1 [Oryza sativa Indica Group]
gi|116309615|emb|CAH66670.1| OSIGBa0110B10.7 [Oryza
sativa Indica Group]
Length = 1603
Score = 94.0 bits (232), Expect = 5e-17
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 323 ASHQLRGPATDWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNN 382
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ +++ +L+RYAPE D+K ++FL+ + + +L TFQ +++ +
Sbjct: 383 SVNEYLSQFNKLARYAPEEVDTDKKKIKKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 442
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ S+ RP GQP Q S ++
Sbjct: 443 EDAR----------------KEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 486
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS + C+ C + GH
Sbjct: 487 NRQPGYAPRPQMNRP---APQPQQCAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYA 543
Query: 700 RNFPQ 714
R PQ
Sbjct: 544 RQCPQ 548
>emb|CAE05045.2| OSJNBa0049H08.6 [Oryza sativa Japonica Group]
Length = 1523
Score = 94.0 bits (232), Expect = 5e-17
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 323 ASHQLRGPATDWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNN 382
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ +++ +L+RYAPE D+K ++FL+ + + +L TFQ +++ +
Sbjct: 383 SVNEYLSQFNKLARYAPEEVDTDKKKIKKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 442
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ S+ RP GQP Q S ++
Sbjct: 443 EDAR----------------KEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 486
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS + C+ C + GH
Sbjct: 487 NRQPGYAPRPQMNRP---APQPQQCAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYA 543
Query: 700 RNFPQ 714
R PQ
Sbjct: 544 RQCPQ 548
>gb|ABA95262.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1481
Score = 93.6 bits (231), Expect = 7e-17
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 115 ASHQLRGPAVDWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNS 174
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ +++ +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 175 SVNEYLSQFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLQLIAHDFPTFQHMINKALLL 234
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ S+ RP GQP Q S ++
Sbjct: 235 EDAR----------------KEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 278
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS + C+ C GH
Sbjct: 279 NRQPGYAPRPQMNRP---APQPQQRAPSGNTAPNSVTSFKSPQGPSAVQCFRCNHMGHYA 335
Query: 700 RNFPQ 714
R PQ
Sbjct: 336 RQCPQ 340
>gb|AAS90666.1| putative polyprotein [Oryza sativa Japonica Group]
gi|55733908|gb|AAV59415.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1649
Score = 92.8 bits (229), Expect = 1e-16
Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 19/257 (7%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 331 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNS 390
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ +++ +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 391 SVNEYLSQFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 450
Query: 355 E-----------------KEEESRIT*QERRSEPQKLQELQDSYKRQMTSMPSQTVFRPS 483
E + SR + R +P + + RQ P + RP+
Sbjct: 451 EDARKEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQANRQPGYAPRPQINRPA 510
Query: 484 GQPWQMGSASRLAPSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEI 663
QP Q +S AP+S + PQG PS +
Sbjct: 511 PQPQQRAPSSDTAPNSVTSFK---------SPQG----------------------PSAV 539
Query: 664 MCYFCKEPGHTRRNFPQ 714
C+ C + GH R PQ
Sbjct: 540 QCFRCNQMGHYARQCPQ 556
>emb|CAD41625.1| OSJNBa0091D06.10 [Oryza sativa Japonica Group]
Length = 1831
Score = 92.8 bits (229), Expect = 1e-16
Identities = 67/245 (27%), Positives = 103/245 (42%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 465 ASHQLRGPAADWWENYCNAHPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNS 524
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ + + +L+RYAPE D+K R+FL+ + + L TFQ ++ +
Sbjct: 525 SVNEYLSMFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLHLLAHDFPTFQHMINNALLL 584
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTSMP---SQTVFRPS-GQPWQMG-SASRL 519
E + E + YK++ ++ S+ RP GQP Q S ++
Sbjct: 585 EDAGK----------------EATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 628
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
RP RP PQ Q P G P PS + C+ C + GH
Sbjct: 629 NRQPGYTPRPQMNRP---APQPQQRAPSGNTAPNSVTSFKSPQGPSTVQCFRCNQTGHYA 685
Query: 700 RNFPQ 714
R PQ
Sbjct: 686 RQCPQ 690
>gb|AAX93001.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77548823|gb|ABA91620.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1761
Score = 92.4 bits (228), Expect = 2e-16
Identities = 67/245 (27%), Positives = 105/245 (42%), Gaps = 7/245 (2%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELTESEP--ISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +L+G T DWWE+ EP I+W F F V + + D K+ EF ++ G
Sbjct: 397 ASHQLRGPTADWWENYCNAYPEPTNIAWDEFATAFRAAHVPESTIDMKKEEFNRLKQGNS 456
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
S+ E+ + + +L+RYAPE D+K R+FL+ + + +L TFQ +++ +
Sbjct: 457 SVNEYLSMFNKLARYAPEEVDTDKKKIRKFLKGIAVGMRLQLLAHDFPTFQHMINKALLL 516
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTS---MPSQTVFRPS-GQPWQM-GSASRL 519
E +E + YK++ ++ S+ RP GQP Q S ++
Sbjct: 517 EDAR----------------KEATEEYKKRKSNHQGNSSRGAPRPRYGQPMQYHQSVTQA 560
Query: 520 APSSSVQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTR 699
P RP PQ Q P G P PS + C+ C + GH
Sbjct: 561 NRQPGYAPCPQMNRP---APQPQQRAPSGNTAPNSVTSFKSPQGPSAVQCFRCNQMGHYA 617
Query: 700 RNFPQ 714
R PQ
Sbjct: 618 RQCPQ 622
>emb|CAE04482.1| OSJNBa0029L02.23 [Oryza sativa Japonica Group]
Length = 1514
Score = 92.4 bits (228), Expect = 2e-16
Identities = 73/251 (29%), Positives = 113/251 (45%), Gaps = 10/251 (3%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELT--ESEPISWKRFKELFFQEFV-TDVSRDQKRSEFISIEHGE 171
A +LQG WW+ + T E +PI+W RF F + V +V QKR EF ++ G
Sbjct: 379 AAHQLQGPASLWWDHFQATQLEGQPITWARFTAAFQRTHVPAEVMALQKR-EFRELKQGN 437
Query: 172 MSLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFS 351
S++E+ +++ L+RYAPE DE+ +FL + P++S RL FQ + +
Sbjct: 438 CSVIEYLHEFNNLARYAPEDVREDEEKQEKFLAGMDPELSVRLVSGDYPNFQRLVDKSIR 497
Query: 352 IE---KEEESRIT*QERRSEPQKLQELQDSYKRQMTSMPSQTVFRPSGQPWQMGSASRLA 522
+E KE ES Q+RR + Q+ + R P + S Q Q R A
Sbjct: 498 LEAKHKELES----QKRRLANFRNQQGANQRIRYTNPYPGGS----SSQQQQQQQQPRSA 549
Query: 523 PSSSVQSRPSFV----RPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPG 690
P +P FV +P + Q T P+ Q + + +C+ C EPG
Sbjct: 550 P------QPQFVVRVPQPQQQQSQQGTHAPRSPTSAVQPGQGRRNVQGQQRLCFNCFEPG 603
Query: 691 HTRRNFPQLQR 723
H +P+ +R
Sbjct: 604 HFADKYPKPRR 614
>gb|AAM74296.1|AC083944_14 Putative retroelement [Oryza sativa Japonica Group]
gi|31430529|gb|AAP52431.1| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group]
Length = 365
Score = 91.7 bits (226), Expect = 3e-16
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 2/257 (0%)
Frame = +1
Query: 1 ATFKLQGATRDWWESAELT--ESEPISWKRFKELFFQEFVTDVSRDQKRSEFISIEHGEM 174
A+ +LQG+ +WW+ + E +PI+W F E F + + K+ EF +++ +
Sbjct: 101 ASHQLQGSASEWWDHFRMNRAEGQPITWAEFTEAFKKTHIPAGVVALKKREFRALKQKDR 160
Query: 175 SLVEFANKYRRLSRYAPEVASNDEKNARQFLRALKPQISKRLAGFQIKTFQEALSRGFSI 354
++ E+ +++ RL+RYAPE DE+ +FL LK ++S L + FQE + + +
Sbjct: 161 TVTEYLHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVMLISHDYEDFQELVDKAIRL 220
Query: 355 EKEEESRIT*QERRSEPQKLQELQDSYKRQMTSMPSQTVFRPSGQPWQMGSASRLAPSSS 534
E ++++R+ R+ QE QDS +RQ P Q + PS G + +L +
Sbjct: 221 E-DKKNRM--DNRKRGRIVFQEAQDSSQRQRIK-PLQ-IGEPSSA--SQGQSQQLNIAGE 273
Query: 535 VQSRPSFVRPNTIRPQGQTFRPQGRFVRFQQVHPPGPINPSEIMCYFCKEPGHTRRNFPQ 714
+ S N Q V+ Q + +C+ C EPGH + P+
Sbjct: 274 INS-----ETNASNKDNDEQATQSVSVQQDQSQVNNSNGREQRVCFNCYEPGHFVKECPK 328
Query: 715 LQRADSSSQQGMVYSVV 765
+R QG V ++V
Sbjct: 329 PKR---QQPQGQVNNIV 342