BLASTX nr result
ID: Papaver27_contig00040015
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00040015
(448 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006465238.1| PREDICTED: mediator of RNA polymerase II tra... 60 3e-07
ref|XP_006465237.1| PREDICTED: mediator of RNA polymerase II tra... 60 3e-07
ref|XP_006427497.1| hypothetical protein CICLE_v10024717mg [Citr... 60 3e-07
ref|XP_006427496.1| hypothetical protein CICLE_v10024717mg [Citr... 60 3e-07
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata] 60 3e-07
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co... 59 7e-07
gb|EYU22668.1| hypothetical protein MIMGU_mgv1a000263mg [Mimulus... 58 1e-06
>ref|XP_006465238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X2 [Citrus sinensis]
Length = 1364
Score = 60.1 bits (144), Expect = 3e-07
Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Frame = -1
Query: 448 SQNPQDPASHSMQSQVRNPGQP-QIPL-ANPSQARXXXXXXXXXXXXXNSGIQGPVALSS 275
S P DP S MQ+QV N GQ IPL AN SQ R ++G+QG LSS
Sbjct: 109 SNRPPDPVS--MQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSS 166
Query: 274 TLPS------GAXXXXXXXXXXXXXXSGMTQNSSGNLVGQGGVSSNMFANSTRQM 128
LPS SG++QNS GN +GQ GV SN+FANS RQ+
Sbjct: 167 ALPSVSGLSQSPIPSVVGQTVNMQNMSGISQNSGGNSMGQ-GVPSNLFANSQRQI 220
>ref|XP_006465237.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like isoform X1 [Citrus sinensis]
Length = 1378
Score = 60.1 bits (144), Expect = 3e-07
Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Frame = -1
Query: 448 SQNPQDPASHSMQSQVRNPGQP-QIPL-ANPSQARXXXXXXXXXXXXXNSGIQGPVALSS 275
S P DP S MQ+QV N GQ IPL AN SQ R ++G+QG LSS
Sbjct: 109 SNRPPDPVS--MQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSS 166
Query: 274 TLPS------GAXXXXXXXXXXXXXXSGMTQNSSGNLVGQGGVSSNMFANSTRQM 128
LPS SG++QNS GN +GQ GV SN+FANS RQ+
Sbjct: 167 ALPSVSGLSQSPIPSVVGQTVNMQNMSGISQNSGGNSMGQ-GVPSNLFANSQRQI 220
>ref|XP_006427497.1| hypothetical protein CICLE_v10024717mg [Citrus clementina]
gi|557529487|gb|ESR40737.1| hypothetical protein
CICLE_v10024717mg [Citrus clementina]
Length = 1369
Score = 60.1 bits (144), Expect = 3e-07
Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Frame = -1
Query: 448 SQNPQDPASHSMQSQVRNPGQP-QIPL-ANPSQARXXXXXXXXXXXXXNSGIQGPVALSS 275
S P DP S MQ+QV N GQ IPL AN SQ R ++G+QG LSS
Sbjct: 109 SNRPPDPGS--MQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSS 166
Query: 274 TLPS------GAXXXXXXXXXXXXXXSGMTQNSSGNLVGQGGVSSNMFANSTRQM 128
LPS SG++QNS GN +GQ GV SN+FANS RQ+
Sbjct: 167 ALPSVSGLSQSPIPSVVGQTVNMQNMSGISQNSGGNSMGQ-GVPSNLFANSQRQI 220
>ref|XP_006427496.1| hypothetical protein CICLE_v10024717mg [Citrus clementina]
gi|557529486|gb|ESR40736.1| hypothetical protein
CICLE_v10024717mg [Citrus clementina]
Length = 1383
Score = 60.1 bits (144), Expect = 3e-07
Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Frame = -1
Query: 448 SQNPQDPASHSMQSQVRNPGQP-QIPL-ANPSQARXXXXXXXXXXXXXNSGIQGPVALSS 275
S P DP S MQ+QV N GQ IPL AN SQ R ++G+QG LSS
Sbjct: 109 SNRPPDPGS--MQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMLSAGVQGSSGLSS 166
Query: 274 TLPS------GAXXXXXXXXXXXXXXSGMTQNSSGNLVGQGGVSSNMFANSTRQM 128
LPS SG++QNS GN +GQ GV SN+FANS RQ+
Sbjct: 167 ALPSVSGLSQSPIPSVVGQTVNMQNMSGISQNSGGNSMGQ-GVPSNLFANSQRQI 220
>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
Length = 1405
Score = 60.1 bits (144), Expect = 3e-07
Identities = 48/115 (41%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Frame = -1
Query: 448 SQNPQDPASHSMQSQVRNPGQP-QIPL-ANPSQARXXXXXXXXXXXXXNSGIQGPVALSS 275
S P DP S MQ+QV N GQ IPL AN SQ R ++G+QG LSS
Sbjct: 124 SNRPPDPGS--MQNQVHNQGQSLPIPLSANQSQVRQQLLSQNIQNNMSSAGVQGSSGLSS 181
Query: 274 TLPS------GAXXXXXXXXXXXXXXSGMTQNSSGNLVGQGGVSSNMFANSTRQM 128
LPS SG++QNS GN +GQ GV SN+FANS RQ+
Sbjct: 182 ALPSVSGLSQSPIPSVVGQTVNMQNMSGISQNSGGNSMGQ-GVPSNLFANSQRQI 235
>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
gi|223530005|gb|EEF31930.1| transcription cofactor,
putative [Ricinus communis]
Length = 1382
Score = 58.9 bits (141), Expect = 7e-07
Identities = 49/116 (42%), Positives = 59/116 (50%), Gaps = 9/116 (7%)
Frame = -1
Query: 448 SQNPQDP-ASHSMQSQVRNPGQP-QIPL-ANPSQARXXXXXXXXXXXXXNSGIQGPVALS 278
+ P DP AS SMQ QV N GQ +PL AN +Q R ++GIQ L+
Sbjct: 109 NNRPPDPGASQSMQPQVHNQGQSLPVPLSANQTQTRQQLLSQNIQNNMASTGIQSSAGLT 168
Query: 277 STLP--SG----AXXXXXXXXXXXXXXSGMTQNSSGNLVGQGGVSSNMFANSTRQM 128
S LP SG + SG+ QNS+GN +GQG V SNMFANS RQM
Sbjct: 169 SALPPVSGLAQTSIPNVVGQNSNMQNISGVPQNSAGNSLGQG-VPSNMFANSQRQM 223
>gb|EYU22668.1| hypothetical protein MIMGU_mgv1a000263mg [Mimulus guttatus]
Length = 1336
Score = 58.2 bits (139), Expect = 1e-06
Identities = 44/119 (36%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Frame = -1
Query: 448 SQNPQDPASHSMQSQVRNPGQPQIPL---ANPSQARXXXXXXXXXXXXXNSGIQGPVALS 278
S+NPQDPAS SMQSQ++N Q Q+P+ +N SQ R ++G+ LS
Sbjct: 71 SKNPQDPASQSMQSQMQNQVQ-QLPIPMVSNQSQVRQQLLSQNIQNSISSTGVPNSAGLS 129
Query: 277 STLPSGAXXXXXXXXXXXXXXSGM---------TQNSSGNLVGQGGVSSNMFANSTRQM 128
S LP M T N+ GN +GQ GV SNM+ANS RQ+
Sbjct: 130 SALPPVGGMSQGTMPSVPGQNPNMQNIQNMSNVTPNAVGNSMGQ-GVPSNMYANSQRQI 187