BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00037848
         (1271 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, part...   223   1e-67
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...   213   3e-65
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...   213   3e-65
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   200   1e-64
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   218   2e-64
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   198   2e-64
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...   201   4e-64
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...   203   5e-63
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   189   8e-62
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   208   1e-61
ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608...   197   4e-61
emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...   195   4e-61
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]             194   1e-60
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   202   2e-60
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   201   3e-60
ref|XP_002436460.1| hypothetical protein SORBIDRAFT_10g003020 [S...   229   3e-60
ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [S...   238   5e-60
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...   199   7e-60
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]             201   3e-59
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]              201   3e-59

>ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
            gi|462403223|gb|EMJ08780.1| hypothetical protein
            PRUPE_ppa018489mg, partial [Prunus persica]
          Length = 1146

 Score =  223 bits (567), Expect(2) = 1e-67
 Identities = 125/342 (36%), Positives = 185/342 (54%), Gaps = 1/342 (0%)
 Frame = -2

Query: 1237 NPTKKIKMLLKEVENIDKRVGSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSRDNMIALGE 1058
            N   +I +L+K + N+       +    ++    ++  L+  +E   KQ+SR N ++ G+
Sbjct: 201  NNLSRINLLMKSLSNLQSGPLEENYRHQESAIWDEMSVLWSREETYWKQRSRLNWLSAGD 260

Query: 1057 KNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPVVALSSDNL 878
             NTK+FH  TL RR+RN I+ +  S G+ +     I      +F NLF +         L
Sbjct: 261  ANTKFFHTTTLQRRQRNKIETLLKSEGNCISGDQAIREEFGIFFGNLFKSGGPRNWGGIL 320

Query: 877  VHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGTIGPQVVC 698
              +   IT   N  L      +E+   +K++   ++PGPDGFP  FY   W  I   V  
Sbjct: 321  NCVHASITEAQNKRLTDPFSMEEVRTAVKQLGSLKAPGPDGFPGLFYDRFWEIIQNFVNN 380

Query: 697  TVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLANRMKSLL 518
             V  FF+  + L   + TH+ LIPK   P   + FRPI LCN SYKI++KLLANR+K+LL
Sbjct: 381  LVTDFFLGNSRLELLNHTHIVLIPKIPKPTSVNHFRPISLCNNSYKILSKLLANRLKTLL 440

Query: 517  DKVISPYQSAFLFSRKISDNIVVAHEIVH-LMXXXXXXXXXXXXKIDMSKAFDRVSWEFL 341
              +IS +Q+AF+  R+I DNI++AHE  H L             K+DM+KA+DRV W+FL
Sbjct: 441  PMLISQHQNAFVPGRQIQDNILLAHEAFHYLRLKSSKKSFELGLKLDMNKAYDRVEWDFL 500

Query: 340  NKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPTR 215
              TL +F F   W +L+  CV T + +++LNG PG  F P+R
Sbjct: 501  EATLCKFSFDNRWVELVMLCVKTITFSLVLNGSPGSPFSPSR 542



 Score = 62.8 bits (151), Expect(2) = 1e-67
 Identities = 32/71 (45%), Positives = 44/71 (61%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
           RQGDPLSPYLF++   V S  ++ +  +  + GIK++R    +SHL FADD L F +A  
Sbjct: 545 RQGDPLSPYLFLLVSEVLSLNIINSTDTGMLRGIKLSRGGPELSHLFFADDSLFFLQATP 604

Query: 35  GECRNLLNIIE 3
             C  L +IIE
Sbjct: 605 PNCSALKSIIE 615


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score =  213 bits (541), Expect(2) = 3e-65
 Identities = 117/350 (33%), Positives = 186/350 (53%), Gaps = 1/350 (0%)
 Frame = -2

Query: 1261 HGNMLFSGNPTKKIKMLLKEVENIDKRVGSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSR 1082
            H + L S    KK++  L       +RV       L+      +   +  +E   KQ+SR
Sbjct: 668  HASNLNSEQRIKKLQSSLNRAMESTRRVDRQLIPQLQE----SLAKAFSDEEIYWKQKSR 723

Query: 1081 DNMIALGEKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPV 902
            +  +  G++NT YFH  T  R  +N ++ I D  G +     +I     ++F N+F+   
Sbjct: 724  NQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFSTNG 783

Query: 901  VALSSDNLVHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWG 722
            + +S  +    +  +T T NL L +   + EI+  I ++  +++PGPDG  A FYK+ W 
Sbjct: 784  IKVSPIDFADFKSTVTNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWD 843

Query: 721  TIGPQVVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLL 542
             +G  V+  V+KFF    + P  + T++ +IPK  +P   S++RPI LCN  YK+I+K L
Sbjct: 844  IVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCL 903

Query: 541  ANRMKSLLDKVISPYQSAFLFSRKISDNIVVAHEIVH-LMXXXXXXXXXXXXKIDMSKAF 365
             NR+KS L+ ++S  Q+AF+  R I+DN+++AHE++H L             K D+SKA+
Sbjct: 904  VNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAY 963

Query: 364  DRVSWEFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPTR 215
            DRV W+FL  T+  FGF   W   I   V +   +VL+NG P  +  PTR
Sbjct: 964  DRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTR 1013



 Score = 64.7 bits (156), Expect(2) = 3e-65
 Identities = 29/71 (40%), Positives = 46/71 (64%)
 Frame = -1

Query: 215  RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
            RQGDPLSPYLFI+C  + S L+    +S  + G+++   +  I+HL FADD L F +A++
Sbjct: 1016 RQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANV 1075

Query: 35   GECRNLLNIIE 3
              C+ L ++ +
Sbjct: 1076 RNCQALKDVFD 1086


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score =  213 bits (541), Expect(2) = 3e-65
 Identities = 117/350 (33%), Positives = 186/350 (53%), Gaps = 1/350 (0%)
 Frame = -2

Query: 1261 HGNMLFSGNPTKKIKMLLKEVENIDKRVGSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSR 1082
            H + L S    KK++  L       +RV       L+      +   +  +E   KQ+SR
Sbjct: 442  HASNLNSEQRIKKLQSSLNRAMESTRRVDRQLIPQLQE----SLAKAFSDEEIYWKQKSR 497

Query: 1081 DNMIALGEKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPV 902
            +  +  G++NT YFH  T  R  +N ++ I D  G +     +I     ++F N+F+   
Sbjct: 498  NQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFSTNG 557

Query: 901  VALSSDNLVHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWG 722
            + +S  +    +  +T T NL L +   + EI+  I ++  +++PGPDG  A FYK+ W 
Sbjct: 558  IKVSPIDFADFKSTVTNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWD 617

Query: 721  TIGPQVVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLL 542
             +G  V+  V+KFF    + P  + T++ +IPK  +P   S++RPI LCN  YK+I+K L
Sbjct: 618  IVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCL 677

Query: 541  ANRMKSLLDKVISPYQSAFLFSRKISDNIVVAHEIVH-LMXXXXXXXXXXXXKIDMSKAF 365
             NR+KS L+ ++S  Q+AF+  R I+DN+++AHE++H L             K D+SKA+
Sbjct: 678  VNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAY 737

Query: 364  DRVSWEFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPTR 215
            DRV W+FL  T+  FGF   W   I   V +   +VL+NG P  +  PTR
Sbjct: 738  DRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTR 787



 Score = 64.7 bits (156), Expect(2) = 3e-65
 Identities = 29/71 (40%), Positives = 46/71 (64%)
 Frame = -1

Query: 215  RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
            RQGDPLSPYLFI+C  + S L+    +S  + G+++   +  I+HL FADD L F +A++
Sbjct: 790  RQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANV 849

Query: 35   GECRNLLNIIE 3
              C+ L ++ +
Sbjct: 850  RNCQALKDVFD 860


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  200 bits (509), Expect(2) = 1e-64
 Identities = 116/343 (33%), Positives = 185/343 (53%), Gaps = 1/343 (0%)
 Frame = -2

Query: 1240 GNPTKKIKMLLKEVENIDKRVGSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSRDNMIALG 1061
            G+  K++K + KE+E   ++  S   V  +    +++E L    +   KQ++  N +  G
Sbjct: 545  GDLEKRVKKVKKELETCRRQPISRDQVVREEVLRYRLEKLEQQVDIYWKQRAHTNWLNKG 604

Query: 1060 EKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPVVALSSDN 881
            ++NT +FH     RR+RN I+ +    G  V+ +     ++ E+F  LFT+     S   
Sbjct: 605  DRNTSFFHASCSERRRRNRINKLRREDGSWVEREEDKRAMIIEFFKQLFTSNGGQNSQKL 664

Query: 880  LVHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGTIGPQVV 701
            L  ++  ++   N +L      +E+   +  +   ++PGPDG PA FYK  W  +G +V 
Sbjct: 665  LDVVDRKVSGAMNESLRAEFTREEVKEALDAIGDLKAPGPDGMPAGFYKACWDVVGEKVT 724

Query: 700  CTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLANRMKSL 521
              V +      +   ++   + LIPK K P+   + RPI LCN  YK+++K+LANR+K +
Sbjct: 725  DEVLEVLRGGAIPEGWNDITIVLIPKVKKPELIKDLRPISLCNVCYKLVSKVLANRLKKI 784

Query: 520  LDKVISPYQSAFLFSRKISDNIVVAHEIVHLM-XXXXXXXXXXXXKIDMSKAFDRVSWEF 344
            L  VISP QSAF+  R ISDNI++A E+ H M             K+DMSKA+DRV W F
Sbjct: 785  LPDVISPAQSAFVPGRLISDNILIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSF 844

Query: 343  LNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPTR 215
            L+  +L+ GF  DW +LI +CVST +  + +NG+  + F P R
Sbjct: 845  LHDMILKLGFHTDWVNLIMKCVSTVTYRIRVNGELSESFSPGR 887



 Score = 75.1 bits (183), Expect(2) = 1e-64
 Identities = 35/71 (49%), Positives = 49/71 (69%)
 Frame = -1

Query: 215  RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
            RQGDPLSPYLF++C   FS LL   E   R+HGI++ + +  +SHLLFADD L+  +A+ 
Sbjct: 890  RQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLLFADDSLILCRANG 949

Query: 35   GECRNLLNIIE 3
            GE + L  I++
Sbjct: 950  GEAQQLQTILQ 960


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  218 bits (554), Expect(2) = 2e-64
 Identities = 116/344 (33%), Positives = 193/344 (56%), Gaps = 3/344 (0%)
 Frame = -2

Query: 1237 NPTKKIKMLLKEVENIDKR--VGSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSRDNMIAL 1064
            NP+ ++  LL ++E + +     + H +++      Q+  L+   E    Q+SR N + L
Sbjct: 900  NPSVQVADLLSDIEKLHQSNPPDAHHQINILTD---QVTKLWTQDEMYWHQRSRVNWLKL 956

Query: 1063 GEKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPVVALSSD 884
            G++N+ +FH+ T+ RR+ N I  + D HG+ +  +  +A+   +YF  L+ +       +
Sbjct: 957  GDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDSEADVALQFLDYFTALYQSNGPQQWEE 1016

Query: 883  NLVHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGTIGPQV 704
             L  ++  +T   N  L       E+   +  +   ++PGPDGF   FY++ W  +   +
Sbjct: 1017 VLDFVDTAVTAEMNKILSSPVSLLEVKKAVFDLGATKAPGPDGFSGIFYQNQWEWVQSII 1076

Query: 703  VCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLANRMKS 524
              +  +     +LL   ++THL LIPK K+P  PS +RPI LCN SYKI+ K++A+R++ 
Sbjct: 1077 HESALQHQTSSSLLQVMNRTHLALIPKVKAPTHPSHYRPIALCNFSYKILTKIIASRLQP 1136

Query: 523  LLDKVISPYQSAFLFSRKISDNIVVAHEIV-HLMXXXXXXXXXXXXKIDMSKAFDRVSWE 347
             + ++IS  QSAF+ +R+I DN+++AHEI  HL             K+DM+KA+DRV W 
Sbjct: 1137 FMSELISDNQSAFVSNRQIQDNVIIAHEIYHHLKLTRSCNNGAFGLKLDMNKAYDRVEWN 1196

Query: 346  FLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPTR 215
            FL   L + GF   W  L+  CV+T+S++VL+NGKPG  F P+R
Sbjct: 1197 FLEAVLRKMGFVDSWIGLVMSCVTTSSLSVLINGKPGPSFLPSR 1240



 Score = 57.0 bits (136), Expect(2) = 2e-64
 Identities = 28/70 (40%), Positives = 41/70 (58%)
 Frame = -1

Query: 215  RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
            RQGDPLSP+LF+    V SR++        +  + +  N+ P+SHL FADD L F +A L
Sbjct: 1243 RQGDPLSPFLFLFVNDVLSRMINKMCQDSLLTPVTIGPNNLPVSHLFFADDSLFFLRATL 1302

Query: 35   GECRNLLNII 6
              C  L +++
Sbjct: 1303 QNCETLSDLL 1312


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  198 bits (503), Expect(2) = 2e-64
 Identities = 121/346 (34%), Positives = 182/346 (52%), Gaps = 4/346 (1%)
 Frame = -2

Query: 1240 GNPTKKIKMLLKEVENIDKRVGSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSRDNMIALG 1061
            GN  K+ K  L  +  + +R   +  +         ++ ++  +E     ++R N I  G
Sbjct: 292  GNLKKRKKEALTLLNGLQQRDPDASTLEQCRIVSGDLDEIHRLEESYWHARARANEIRDG 351

Query: 1060 EKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFT--APV-VALS 890
            +KNTKYFH     R++RN I+ + D +G   K + +I  V+  YF  LF   +PV + L+
Sbjct: 352  DKNTKYFHHKASQRKRRNTINELLDENGVWKKGREEICGVVQHYFEGLFATDSPVNMELA 411

Query: 889  SDNLVHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGTIGP 710
             + L H    ++   N ALL +P  DE+   +  M PN++PG DG  A F++  W  +G 
Sbjct: 412  LEGLSHC---VSTDMNTALLMLPSGDEVKEALFAMHPNKAPGIDGLHALFFQKFWHILGS 468

Query: 709  QVVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLANRM 530
             V+  VQ ++     L   +KT + LIPK   P+   +FRPI LC   YKI++K LANR+
Sbjct: 469  DVISFVQSWWRGMGDLGVVNKTCIVLIPKCDHPQSMKDFRPISLCTVLYKILSKTLANRL 528

Query: 529  KSLLDKVISPYQSAFLFSRKISDNIVVAHEIVHLM-XXXXXXXXXXXXKIDMSKAFDRVS 353
            K +L  +ISP QSAF+  R I+DN +VA EI H M             K+DMSKA+DRV 
Sbjct: 529  KVILPAIISPNQSAFVPRRLITDNALVAFEIFHAMKRKDANKNGVCALKLDMSKAYDRVE 588

Query: 352  WEFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPTR 215
            W FL + + + GF   W D +  C+S+ S    +NG       P+R
Sbjct: 589  WCFLERVMKKMGFCDGWIDRVMACISSVSFTFNVNGVVEGSLSPSR 634



 Score = 76.3 bits (186), Expect(2) = 2e-64
 Identities = 34/70 (48%), Positives = 48/70 (68%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
           RQGDP+SPYLF++C   FS LL    + K++HG ++ R +  +SHL FADD +LF KA +
Sbjct: 637 RQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFADDSILFTKASV 696

Query: 35  GECRNLLNII 6
            EC  + +II
Sbjct: 697 QECSMVADII 706


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  201 bits (510), Expect(2) = 4e-64
 Identities = 119/339 (35%), Positives = 183/339 (53%), Gaps = 10/339 (2%)
 Frame = -2

Query: 1231 TKKIKMLLKEVENIDKRVGSSHNVSLKNPKLHQ-------IEHLYDTQEEIGKQQSRDNM 1073
            TKK K L K++E  +K +  + N  +      +       ++ L+   E     +SR   
Sbjct: 287  TKKFKNLSKQIETAEKALSVAQNNPISESACQECVLLEKKLDELHAKHEAYWYLRSRVAE 346

Query: 1072 IALGEKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPVVA- 896
            +  G+KNTKYFH     R+KRN +  + D  G   +E + I  + + YF+++FT+   + 
Sbjct: 347  VKDGDKNTKYFHHKASQRKKRNFVKGLFDGLGTWREEADHIENIFTSYFSSIFTSSNPSD 406

Query: 895  LSSDNLVH-IEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGT 719
            LS + ++  IEPV+T   NL LL     DEI   +++M P ++PGPDG    FY+  W  
Sbjct: 407  LSLEAVMSVIEPVVTEEHNLKLLEPFSKDEILAALQQMHPCKAPGPDGMHVIFYQRFWHI 466

Query: 718  IGPQVVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLA 539
            +G  V   +       +     + T++ LIPK K+P   +EFRPI LCN  YK+++K + 
Sbjct: 467  VGDDVTSFISNILHGHSSPSCVNNTNIALIPKVKNPTKAAEFRPIALCNVLYKLMSKAIV 526

Query: 538  NRMKSLLDKVISPYQSAFLFSRKISDNIVVAHEIVHLM-XXXXXXXXXXXXKIDMSKAFD 362
             R+KS L ++IS  QSAF+  R I+DN ++A E+ H M             K+DMSKA+D
Sbjct: 527  MRLKSFLPEIISENQSAFVPGRLITDNALIAMEVFHSMKNRNRSRKGTIAMKLDMSKAYD 586

Query: 361  RVSWEFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNG 245
            RV W FL K LL  GF   W +LI + VS+ + + ++NG
Sbjct: 587  RVEWGFLRKLLLTMGFDGRWVNLIMEFVSSVTYSFIING 625



 Score = 72.8 bits (177), Expect(2) = 4e-64
 Identities = 34/70 (48%), Positives = 48/70 (68%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
           RQGDPLSPYLFI+    FS+++      K++HG K +R+   ISHL FADD LLF +A+ 
Sbjct: 638 RQGDPLSPYLFIMVADAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFADDSLLFTRANR 697

Query: 35  GECRNLLNII 6
            EC  +++I+
Sbjct: 698 QECTIIVDIL 707


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score =  203 bits (516), Expect(2) = 5e-63
 Identities = 118/335 (35%), Positives = 183/335 (54%), Gaps = 3/335 (0%)
 Frame = -2

Query: 1240 GNPTKKIKMLLKEVENIDKRVGSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSRDNMIALG 1061
            GN  K++  +  ++  + ++  SS N   +     +++ L+  QE     +SR   +  G
Sbjct: 291  GNIGKQLGRVESDLCRLQQQPISSANCEARLTLEKKLDELHAKQEARWYLRSRAMEVRDG 350

Query: 1060 EKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTA--PVVALSS 887
            ++NTKYFH     R+KRN +  + D+ G   +E + I  V ++YF ++FT+  P     +
Sbjct: 351  DRNTKYFHHKASQRKKRNFVKGLFDASGTWCEEVDDIECVFTDYFTSIFTSTNPSDVQLN 410

Query: 886  DNLVHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGTIGPQ 707
            D L  ++PV+T   N  LL+    +E++  + +M P ++PGPDG  A FY+  W  IG  
Sbjct: 411  DVLCCVDPVVTEECNTWLLKPFSKEELYVALSQMHPCKAPGPDGMHAIFYQKFWHIIGDD 470

Query: 706  VVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLANRMK 527
            V   V             + T++ LIPK K+P  P+EFRPI LCN  YK+++K L  R+K
Sbjct: 471  VTQFVSSILHGSISPSCINHTNIALIPKVKNPTTPAEFRPIALCNVVYKLVSKALVIRLK 530

Query: 526  SLLDKVISPYQSAFLFSRKISDNIVVAHEIVHLM-XXXXXXXXXXXXKIDMSKAFDRVSW 350
              L +++S  QSAF+  R I+DN ++A E+ H M             K+DMSKA+DRV W
Sbjct: 531  DFLPRLVSENQSAFVPGRLITDNALIAMEVFHSMKHRNRSRKGTIAMKLDMSKAYDRVEW 590

Query: 349  EFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNG 245
             FL K LL  GF   W +LI  CVS+ S + ++NG
Sbjct: 591  GFLRKLLLTMGFDGRWVNLIMSCVSSVSYSFIING 625



 Score = 66.6 bits (161), Expect(2) = 5e-63
 Identities = 32/70 (45%), Positives = 44/70 (62%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
           R GDPLSPYLFI+    FS+++      K++HG K +R+   ISHL FAD  LLF +A  
Sbjct: 638 RHGDPLSPYLFILIADAFSKMIQKKVQEKQLHGAKASRSGPVISHLFFADVSLLFTRASR 697

Query: 35  GECRNLLNII 6
            EC  ++ I+
Sbjct: 698 QECAIIVEIL 707


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  189 bits (480), Expect(2) = 8e-62
 Identities = 119/348 (34%), Positives = 176/348 (50%), Gaps = 10/348 (2%)
 Frame = -2

Query: 1228 KKIKMLLKEVENIDKRVGSSHNVSLKNPKLH-------QIEHLYDTQEEIGKQQSRDNMI 1070
            K    L K++E ++K++ ++   +              +++ L+   E     +SR   +
Sbjct: 291  KTFGSLRKKIEAVEKKLHAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEV 350

Query: 1069 ALGEKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPVVALS 890
              G++NT YFH     R+KRN I  I D  G    E  +I  V+  YF  +FT+   + +
Sbjct: 351  KDGDRNTSYFHHKASQRKKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSSEPSSN 410

Query: 889  S--DNLVHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGTI 716
               + L H++  +T   N  LL+    +EIF  +  M P ++PGPDG  A FY+  W  I
Sbjct: 411  DFQEVLQHVKRSVTQEYNDILLKPYSKEEIFAALSDMHPCKAPGPDGMHAIFYQRFWHII 470

Query: 715  GPQVVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLAN 536
            G +V   V       +     + T++ LIPK KSP   SEFRPI LCN  YKI +K +  
Sbjct: 471  GDEVFNFVSSILHNYSCPGNVNCTNIALIPKVKSPTVVSEFRPISLCNVLYKIASKAIVL 530

Query: 535  RMKSLLDKVISPYQSAFLFSRKISDNIVVAHEIVHLM-XXXXXXXXXXXXKIDMSKAFDR 359
            R+K  L  + +  QSAF+  R ISDN ++A EI H M             K+DMSKA+DR
Sbjct: 531  RLKRFLPCIATENQSAFVPGRLISDNSLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDR 590

Query: 358  VSWEFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPTR 215
            V W FL K LL  GF   W +L+  CV+T S + ++NG+      P+R
Sbjct: 591  VEWGFLRKLLLTMGFDGRWVNLVMSCVATVSYSFIINGRVCGSVTPSR 638



 Score = 76.6 bits (187), Expect(2) = 8e-62
 Identities = 36/70 (51%), Positives = 48/70 (68%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
           RQGDPLSP+LFI+    FS+++     SK +HG K +RN   ISHLLFADD LLF +A  
Sbjct: 641 RQGDPLSPFLFILVADAFSQMVKQKVVSKEIHGAKASRNGPEISHLLFADDSLLFTRATR 700

Query: 35  GECRNLLNII 6
            EC  +++I+
Sbjct: 701 QECLTIVDIL 710


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score =  208 bits (529), Expect(2) = 1e-61
 Identities = 118/336 (35%), Positives = 173/336 (51%)
 Frame = -2

Query: 1225 KIKMLLKEVENIDKRVGSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSRDNMIALGEKNTK 1046
            +++  LK V++  +RV S  +  L+     +  H+   +E +  Q+SR+  + LG+KNT 
Sbjct: 297  RVEWRLKGVQSYLERVDSYRHTLLEKELQDEYNHILFQEEMLWYQKSREQWVKLGDKNTA 356

Query: 1045 YFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPVVALSSDNLVHIE 866
            +FH  T+ RRK N I  +   +G    + N +     +YF   F    +  S        
Sbjct: 357  FFHAQTVIRRKWNKIHKLQLPNGISTSDSNILQEEALKYFKKFFCGSQIPYSRFFNEGRH 416

Query: 865  PVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGTIGPQVVCTVQK 686
            P +  T   +L       E+F  +  MKP ++PGPDGF   F+K  W  +G  V   V+ 
Sbjct: 417  PALDDTGKTSLTSPITKKEVFAALNSMKPYKAPGPDGFHCIFFKQYWHIVGDDVFHLVRS 476

Query: 685  FFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLANRMKSLLDKVI 506
             F+     P    T + LIPK  SP    +FRPI LCNT YKII K+L +R++  L+ +I
Sbjct: 477  AFLTGHFDPAISNTLIALIPKIDSPNTYKDFRPISLCNTLYKIITKVLVHRLRPFLNNLI 536

Query: 505  SPYQSAFLFSRKISDNIVVAHEIVHLMXXXXXXXXXXXXKIDMSKAFDRVSWEFLNKTLL 326
             PYQS+FL  R  +DN ++  EI+H M            K+D+ KAFD V+W+FLN  LL
Sbjct: 537  GPYQSSFLPGRGTADNSIILQEILHFMKRSKRKKGYVAFKLDLEKAFDNVNWDFLNSCLL 596

Query: 325  QFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPT 218
             FGF      LI  CVS+ + ++L NG     FKPT
Sbjct: 597  DFGFPDIIVKLIMHCVSSANYSLLWNGNKMPPFKPT 632



 Score = 57.4 bits (137), Expect(2) = 1e-61
 Identities = 31/71 (43%), Positives = 40/71 (56%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
           RQGDPLSPYLFI+CM   S  +           I +  +   ISHLLFADD LLF KA  
Sbjct: 636 RQGDPLSPYLFILCMEKLSVAIQDAVLQGSWEPIHIINDGPQISHLLFADDVLLFTKAKS 695

Query: 35  GECRNLLNIIE 3
            + + + N+ +
Sbjct: 696 SQLQFITNLFD 706


>ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis]
          Length = 1570

 Score =  197 bits (502), Expect(2) = 4e-61
 Identities = 115/349 (32%), Positives = 196/349 (56%), Gaps = 11/349 (3%)
 Frame = -2

Query: 1228 KKIKMLLKEVENID-KRVGSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSRDNMIALGEKN 1052
            KK++ L+ ++ ++   RV       +K  +  QI+++    E   KQ+SR + +  G+KN
Sbjct: 227  KKLEKLMNQLRSLKLSRVQYVKGNKIKEVE-RQIQNMLADDETYWKQRSRADWLKGGDKN 285

Query: 1051 TKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPVVALSSDNLVH 872
            TK+FH    +R+K+N I  I ++ G+ ++    +    S+YF NLFT      S  N   
Sbjct: 286  TKFFHHKASSRKKKNRIWGIENAAGNWIENAEGVEFEFSKYFTNLFTT-----SKPNQDQ 340

Query: 871  IEPVIT---------MTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGT 719
            I   ++         M ++L +   P+  E+   + +M P ++PGPDG PA F++ +W  
Sbjct: 341  IAAALSGISRRVSTEMNESLEMPFTPE--EVVEALTQMCPTKAPGPDGLPAVFFQKHWQR 398

Query: 718  IGPQVVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLA 539
            +   V+ T      ++  +   + T++ LI K   P+  ++FRPI LCN  Y+I+AK +A
Sbjct: 399  VKQGVLSTCLHILNKQGDVAPLNHTYIVLISKKGKPRKVTDFRPISLCNVIYRIVAKAIA 458

Query: 538  NRMKSLLDKVISPYQSAFLFSRKISDNIVVAHEIVH-LMXXXXXXXXXXXXKIDMSKAFD 362
            NR+K++L K+IS  QSAF+ +R I+DNI+V +E +H +             K+D+SKA+D
Sbjct: 459  NRLKNVLPKLISLMQSAFIPNRLIADNIIVGYECLHKIRHCKGRKNGLVALKLDVSKAYD 518

Query: 361  RVSWEFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPTR 215
            R+ W FL +T+   GFSQ+W  LI +C+S+ S +V++NG   +  +P R
Sbjct: 519  RLEWVFLEQTMKSLGFSQNWVSLIMRCISSVSSSVIINGAVSRVIRPQR 567



 Score = 65.9 bits (159), Expect(2) = 4e-61
 Identities = 36/71 (50%), Positives = 45/71 (63%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
           RQG PLSPYLFII +  FS LL   E  + +HG+    N   ISHLLFADD L+F +A  
Sbjct: 570 RQGCPLSPYLFIIGVEAFSSLLQQAEHQRLIHGLSF-GNELKISHLLFADDSLVFTRASD 628

Query: 35  GECRNLLNIIE 3
            +C+NL  I +
Sbjct: 629 TDCQNLKKIFD 639


>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score =  195 bits (495), Expect(2) = 4e-61
 Identities = 109/325 (33%), Positives = 181/325 (55%), Gaps = 5/325 (1%)
 Frame = -2

Query: 1177 GSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSRDNMIALGEKNTKYFHRITLNRRKRNNID 998
            G   +  +K+  + ++E     Q +  +Q+ +    A  + N+++F R    R+++N I 
Sbjct: 323  GGKLDEEIKDESIRKLE----VQLKFWQQRVKCKWKAWEDTNSRWFFRKAKRRKQKNEIL 378

Query: 997  CITDSHGHVVKEKNQIAIVLSEYFANLFTAPVVALSS----DNLVHIEPVITMTDNLALL 830
             I +S G  V  K  I      YFA++F     +       D + H+ P I +     L+
Sbjct: 379  VIKNSAGKWVSSKQDIQGEFLGYFADIFQGSQHSQEYWEELDGIRHLIPQIDLMQREDLI 438

Query: 829  RIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGTIGPQVVCTVQKFFIQKTLLPYFD 650
            +    +E+  ++ +M   ++PGPDG PA FY+ +W  +G  +   V  FF    +L  ++
Sbjct: 439  KPVTREEVRNVVFQMGSLKAPGPDGIPAIFYQKHWSIVGEDIWRAVSHFFTTGYILQEWN 498

Query: 649  KTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLANRMKSLLDKVISPYQSAFLFSRK 470
            +T++ LIPK + P+   +FRPI LCN  YKII+K++ANR+K +L  +++PYQ+AF+  R 
Sbjct: 499  QTNICLIPKVERPEQACQFRPISLCNVIYKIISKIIANRLKPILKSIVTPYQNAFVPGRL 558

Query: 469  ISDNIVVAHEIVHLM-XXXXXXXXXXXXKIDMSKAFDRVSWEFLNKTLLQFGFSQDWCDL 293
            ISDN ++AHE+V+L+             KIDM KA+D+V W+FL   L Q GF   +   
Sbjct: 559  ISDNCLIAHEVVNLIKQRKKGTHFLAALKIDMFKAYDKVDWDFLFWLLTQMGFPSFYRQW 618

Query: 292  IFQCVSTTSIAVLLNGKPGQFFKPT 218
            I QCV+T S ++++NG+P   FKP+
Sbjct: 619  IMQCVTTVSYSIIVNGEPTTRFKPS 643



 Score = 68.6 bits (166), Expect(2) = 4e-61
 Identities = 35/70 (50%), Positives = 47/70 (67%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
           RQGDPLS YLFI+ M V SRLL+   ++    GIK++R+S  +SHL FADD L+F KA  
Sbjct: 647 RQGDPLSSYLFILIMDVLSRLLIDGVSAGSFQGIKLSRSSPVLSHLFFADDSLIFFKATP 706

Query: 35  GECRNLLNII 6
             C  + +I+
Sbjct: 707 TACAGVKDIL 716


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score =  194 bits (493), Expect(2) = 1e-60
 Identities = 109/308 (35%), Positives = 160/308 (51%), Gaps = 1/308 (0%)
 Frame = -2

Query: 1135 QIEHLYDTQEEIGKQQSRDNMIALGEKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKN 956
            +++  Y  +E+   Q+SR   + +G+ N+KYFH +T  RR RN I  + D +G    E  
Sbjct: 174  RLKEAYIDEEQYWYQKSRSLWMKVGDNNSKYFHALTKQRRARNRIIGLHDENGKWFAEDK 233

Query: 955  QIAIVLSEYFANLFTAPVVALSSDNLVHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPN 776
             +  +   YF  LF        +++L  ++ +IT   N  L      DE+   +  M P 
Sbjct: 234  DVQHIAVSYFETLFNKSNPQNIAESLSEVKTLITDQINDFLTTPATEDEVRAALFLMHPE 293

Query: 775  RSPGPDGFPASFYKHNWGTIGPQVVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSE 596
            ++PGPDG  A F++  W TI   ++  V  F          + T++ LIPKT+ P   +E
Sbjct: 294  KAPGPDGMTALFFQKPWATIKMDMLFLVNSFLQDGVFDKQLNTTNICLIPKTERPTRMTE 353

Query: 595  FRPIGLCNTSYKIIAKLLANRMKSLLDKVISPYQSAFLFSRKISDNIVVAHEIVH-LMXX 419
             RPI LCN  YKII+K+L  R+K +L  +IS   SAF+  R ISDNI++A E+ H L   
Sbjct: 354  LRPISLCNVGYKIISKILCQRLKKILPSLISETHSAFVEGRLISDNILIAQEMFHGLRTN 413

Query: 418  XXXXXXXXXXKIDMSKAFDRVSWEFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKP 239
                      K DMSKA+DRV W F+ + L + GF + W   I  C++T    VLLNG+P
Sbjct: 414  PSCKGKFMAIKTDMSKAYDRVEWNFIEELLKKMGFCEKWISWIMWCITTVQYRVLLNGQP 473

Query: 238  GQFFKPTR 215
                 P R
Sbjct: 474  RGLIVPKR 481



 Score = 67.4 bits (163), Expect(2) = 1e-60
 Identities = 34/71 (47%), Positives = 45/71 (63%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
           RQGDPLSPYLFI+C  V    +   E  K + GIK+   S  +SHLLFA+D L F KA+ 
Sbjct: 484 RQGDPLSPYLFILCTEVLIANIRKAEQEKLITGIKVATASPSVSHLLFANDSLFFCKANK 543

Query: 35  GECRNLLNIIE 3
            +C  +L I++
Sbjct: 544 EQCGVILGILK 554


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  202 bits (515), Expect(2) = 2e-60
 Identities = 114/348 (32%), Positives = 185/348 (53%), Gaps = 6/348 (1%)
 Frame = -2

Query: 1240 GNPTKKIKMLLKEVENIDKRVGSSHN-VSLKNPK---LHQIEHLYDTQEEIGKQQSRDNM 1073
            GN  ++++ + + +E I + +   HN  SLK  +   L +   L +      KQ+ + + 
Sbjct: 299  GNIFRQLRQVDERLEEIQRNLLIDHNNTSLKTQQELFLAKRNKLLEYNTTYWKQKCKSDF 358

Query: 1072 IALGEKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPVVAL 893
            + LG+ N+K++H     R+ RN I      +   + + + I   ++  F   F +     
Sbjct: 359  MVLGDTNSKFYHTHASIRKYRNQIKEFIPDNAQPITQPDLIEKEITLAFKKRFISNPACK 418

Query: 892  SSDNLVH--IEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGT 719
             + N+    + P+++  DN  L      +EI   +  + P++SPGPDGFP  F++  W  
Sbjct: 419  FNQNVDFNLLSPIVSEADNAYLTSAVSPEEIKNAVFDLAPDKSPGPDGFPPYFFQKYWTL 478

Query: 718  IGPQVVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLA 539
            IG  V   VQ FF    +L   + T L LIPK   P + + FRPI LC+T YK+I+K++ 
Sbjct: 479  IGKSVCRAVQAFFHSGYMLKEVNHTFLALIPKVDKPVNANHFRPISLCSTIYKVISKIIT 538

Query: 538  NRMKSLLDKVISPYQSAFLFSRKISDNIVVAHEIVHLMXXXXXXXXXXXXKIDMSKAFDR 359
            NR+K  L K+I P Q AF+  R I DNI++AHE+ H              K+DM KA+DR
Sbjct: 539  NRLKITLGKIIHPLQGAFIPERLIQDNILIAHEVFHSFKNKTGRGGWIAIKLDMEKAYDR 598

Query: 358  VSWEFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPTR 215
            + W+++  T+ + GFS  W + I  C+S+ S +VL+NG PG+ F P+R
Sbjct: 599  LEWKYIYTTMDKMGFSPIWIEWIRSCISSASFSVLVNGIPGERFFPSR 646



 Score = 58.2 bits (139), Expect(2) = 2e-60
 Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVH------GIKMTRNSQPISHLLFADDCLL 54
           RQGDPLSPYLFI+C       LLA E SK  H      G+ + R    I  L FADD ++
Sbjct: 649 RQGDPLSPYLFILC-----AELLAREFSKACHEPGKLIGVPIGRTRTRIPFLTFADDTMI 703

Query: 53  FAKADLGECRNLLNIIE 3
           FAKA    C  +  I++
Sbjct: 704 FAKATEASCHKIRQILD 720


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  201 bits (510), Expect(2) = 3e-60
 Identities = 107/323 (33%), Positives = 177/323 (54%), Gaps = 4/323 (1%)
 Frame = -2

Query: 1171 SHNVSLKNPKLHQIEHLYDTQEEIGKQQSRDNMIALGEKNTKYFHRITLNRRKRNNIDCI 992
            +H + L+     +++ + D +E +  Q+SR   I  G++NT+YFH  T+ RR RN ID +
Sbjct: 318  NHLIKLEAKLRREMDIVLDDEETLWFQKSRMEAICDGDRNTRYFHLSTVIRRSRNRIDML 377

Query: 991  TDSHGHVVKEKNQIAIVLSEYFANLFTAPVVALSSDNLVHIE----PVITMTDNLALLRI 824
             ++ G  +    ++  ++  Y+ +LF+   V     N  H+     P IT  D   ++R 
Sbjct: 378  QNNDGEWISNPMEVKAMVLGYWKHLFSEDSV---QSNFCHLPRDFFPQITADDFEKMMRP 434

Query: 823  PDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGTIGPQVVCTVQKFFIQKTLLPYFDKT 644
                E+   +K MKP ++PGPDGF   FY+  W  + P V+  V +    +     F+ T
Sbjct: 435  LSEVEVTLALKSMKPFKAPGPDGFQPLFYQRFWDLVKPNVMHLVSEILSGRDFPEGFNDT 494

Query: 643  HLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLANRMKSLLDKVISPYQSAFLFSRKIS 464
             + LIPK   P+    FRPIGLCN  YKI+ K++ NR+K +L  +ISP Q +F+ +R+I+
Sbjct: 495  FIVLIPKMDIPQLAKHFRPIGLCNIVYKIVTKVIINRLKPILPSLISPTQCSFVPNRQIT 554

Query: 463  DNIVVAHEIVHLMXXXXXXXXXXXXKIDMSKAFDRVSWEFLNKTLLQFGFSQDWCDLIFQ 284
            DN+++  E+ H M            KID  KA+DR+ W F+ ++L++    Q   D++  
Sbjct: 555  DNVIIVQEMFHSMRNKQGKKGFMAVKIDFEKAYDRLRWTFIRESLMELRIPQHLVDIVMN 614

Query: 283  CVSTTSIAVLLNGKPGQFFKPTR 215
            CVS+ ++ +L NG+P +   PTR
Sbjct: 615  CVSSANLQILWNGEPMEKICPTR 637



 Score = 59.7 bits (143), Expect(2) = 3e-60
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
           RQGDPLSPYL++ICM   + L+     +     +K +RN  PIS+L FADD +LF++A +
Sbjct: 640 RQGDPLSPYLYVICMERLAHLIDQEVTNGNWKPVKASRNGPPISNLAFADDLILFSEASV 699

Query: 35  GECR 24
            + +
Sbjct: 700 EQAQ 703


>ref|XP_002436460.1| hypothetical protein SORBIDRAFT_10g003020 [Sorghum bicolor]
            gi|241914683|gb|EER87827.1| hypothetical protein
            SORBIDRAFT_10g003020 [Sorghum bicolor]
          Length = 862

 Score =  229 bits (583), Expect(2) = 3e-60
 Identities = 119/343 (34%), Positives = 193/343 (56%), Gaps = 4/343 (1%)
 Frame = -2

Query: 1231 TKKIKMLLKEVENIDKRVGSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSRDNMIALGEKN 1052
            + ++K + +++     +  +  N+SL+     Q E +   +E   +Q+ + N  + G++N
Sbjct: 74   SSRLKWIEEKLLKAQSQPPTQSNISLQKFLAAQHEEILAKEEAYHRQRYKKNWASAGDRN 133

Query: 1051 TKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPVVALSSDNLV- 875
            TK+FH++ L R ++N I       G     +NQ+A V + YF  +F +   +  +++   
Sbjct: 134  TKFFHQVILKRARKNIISHFKKPDGSYATTQNQLAEVANNYFQEIFASDADSRLNESCWT 193

Query: 874  ---HIEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGTIGPQV 704
               H +  I   D+     +PD+ E+F I+K M+ N +PGPDG  A FYK +W   G  V
Sbjct: 194  TQNHFDAGIQ--DSSFTDSVPDSTELFAIVKNMRSNAAPGPDGLNAEFYKSSWDWTGKDV 251

Query: 703  VCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLANRMKS 524
            +  V  F+    L P  + TH+ +IPK  +P  P ++RPI LCN  YKIIAK LA R+KS
Sbjct: 252  IKLVSDFYNNAHLQPELNMTHIAMIPKINNPMTPKDYRPISLCNVVYKIIAKSLAERIKS 311

Query: 523  LLDKVISPYQSAFLFSRKISDNIVVAHEIVHLMXXXXXXXXXXXXKIDMSKAFDRVSWEF 344
             L  +I P Q+AF+  R I+ NI++A EI+H              K+D++KAFDR+ W F
Sbjct: 312  HLPHIIHPSQTAFIKGRHIASNIIIAQEILHSFNLKNWKHKAFLLKVDLAKAFDRIEWHF 371

Query: 343  LNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPTR 215
            +   L + G    + DLI++C+S+TS+AV++NG+PG  F P+R
Sbjct: 372  IVSALKRQGLKDKFVDLIYKCISSTSMAVVINGQPGPTFHPSR 414



 Score = 31.6 bits (70), Expect(2) = 3e-60
 Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFAD--DCLLFAKA 42
           RQG PLSPYLFI+ +   ++L    + +  +H I+ +     I+ ++ +D  D +++  +
Sbjct: 417 RQGCPLSPYLFILAV---NKLATCLQLNSDLHEIQASTEISNIT-VVHSDKNDIVIWTPS 472

Query: 41  DLGEC 27
           + GEC
Sbjct: 473 NKGEC 477


>ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor]
            gi|241916792|gb|EER89936.1| hypothetical protein
            SORBIDRAFT_10g022040 [Sorghum bicolor]
          Length = 1088

 Score =  238 bits (606), Expect = 5e-60
 Identities = 126/349 (36%), Positives = 196/349 (56%), Gaps = 2/349 (0%)
 Frame = -2

Query: 1237 NPTKKIKMLLKEVENIDKRVGSSHNVSLKNPKLHQIEHLYDTQEEIGKQQSRDNMIALGE 1058
            N + ++K +   + ++     + +N+SL+   +   E +   +E   +Q+ + N    G+
Sbjct: 295  NNSSRLKWVEANLLHVQSLPPTRNNISLQKHLISLHEDILAKEEAYHRQRYKKNWAVAGD 354

Query: 1057 KNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIVLSEYFANLFTAPVVALSSDNL 878
            +NTK+FH+  L R +RN I       G     ++Q+A V + YF  +FT+       ++ 
Sbjct: 355  RNTKFFHQAILKRARRNTISHFIKPDGSYATTQSQLAKVANNYFKEIFTSDRDNRLREHS 414

Query: 877  VHIEPVIT--MTDNLALLRIPDNDEIFGIIKKMKPNRSPGPDGFPASFYKHNWGTIGPQV 704
              ++ + T  M  N     +PD+ EI  IIK M+ N +PGPDG  A FYK +W   G  V
Sbjct: 415  WAVQDLSTERMEINPFTDSVPDSSEILAIIKNMRSNAAPGPDGLNAEFYKSSWEWTGKDV 474

Query: 703  VCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIGLCNTSYKIIAKLLANRMKS 524
            V  V  F+    L P  +KT++ +IPK  +P  P ++RPI LCN  YKIIAK L +R+K 
Sbjct: 475  VNLVTDFYNNNYLHPDINKTYIAMIPKVNNPNTPRDYRPISLCNVVYKIIAKSLVDRIKF 534

Query: 523  LLDKVISPYQSAFLFSRKISDNIVVAHEIVHLMXXXXXXXXXXXXKIDMSKAFDRVSWEF 344
             L  +I P QSAF+  R I+ NI++A EI+H              K+D++KAFDR+ W F
Sbjct: 535  HLPHIIHPSQSAFIKGRHIASNIIIAQEIIHSFNLKNWKHKAFLLKVDLAKAFDRIEWRF 594

Query: 343  LNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKPGQFFKPTRDREILY 197
            +   L + GFS  + DLI++C+STTS++VL+NG+PG  F P+RD+   Y
Sbjct: 595  IIVALSRQGFSDKFIDLIYKCISTTSLSVLINGQPGPIFHPSRDKNHAY 643


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score =  199 bits (506), Expect(2) = 7e-60
 Identities = 107/308 (34%), Positives = 167/308 (54%), Gaps = 1/308 (0%)
 Frame = -2

Query: 1135 QIEHLYDTQEEIGKQQSRDNMIALGEKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKN 956
            Q+   Y  +E   +Q+SR   +A G+KNT +FH    + R +N +  + D +       +
Sbjct: 323  QLSLAYGDEELFWRQKSRQKWLAGGDKNTGFFHATVHSERLKNELSFLLDENDQEFTRNS 382

Query: 955  QIAIVLSEYFANLFTAPVVALSSDNLVHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPN 776
                + S +F NLFT+  +   +++L  ++  +T   N  L++     E++  +  +   
Sbjct: 383  DKGKIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNLIQEVTELEVYNAVFSINKE 442

Query: 775  RSPGPDGFPASFYKHNWGTIGPQVVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSE 596
             +PGPDGF A F++ +W  +  Q++  +  FF    L   ++ TH+ LIPK  SP+  S+
Sbjct: 443  SAPGPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICLIPKITSPQRMSD 502

Query: 595  FRPIGLCNTSYKIIAKLLANRMKSLLDKVISPYQSAFLFSRKISDNIVVAHEIVH-LMXX 419
             RPI LC+  YKII+K+L  R+K  L  ++S  QSAF+  R ISDNI+VAHE++H L   
Sbjct: 503  LRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDNILVAHEMIHSLRTN 562

Query: 418  XXXXXXXXXXKIDMSKAFDRVSWEFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKP 239
                      K DMSKA+DRV W FL   +   GF+  W   I  CV++ S +VL+NG+P
Sbjct: 563  DRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIMNCVTSVSYSVLINGQP 622

Query: 238  GQFFKPTR 215
                 PTR
Sbjct: 623  YGHIIPTR 630



 Score = 60.1 bits (144), Expect(2) = 7e-60
 Identities = 29/70 (41%), Positives = 40/70 (57%)
 Frame = -1

Query: 215 RQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLLFAKADL 36
           RQGDPLSP LF++C      +L   E + ++ GI+       ++HLLFADD LL  KA  
Sbjct: 633 RQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQFQDKKVSVNHLLFADDTLLMCKATK 692

Query: 35  GECRNLLNII 6
            EC  L+  +
Sbjct: 693 QECEELMQCL 702


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score =  201 bits (511), Expect(2) = 3e-59
 Identities = 111/295 (37%), Positives = 165/295 (55%), Gaps = 1/295 (0%)
 Frame = -2

Query: 1120 YDTQEEIGKQQSRDNMIALGEKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIV 941
            Y  +E   KQ+SR   +  G +N+KYFH      R+R  I+ + D +G++   +     V
Sbjct: 292  YREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEV 351

Query: 940  LSEYFANLFTAPVVALSSDNLVHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGP 761
             + YF NLF +   +  +D    + P ++   N +L+      EI   +  +KP  +PGP
Sbjct: 352  AAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGP 411

Query: 760  DGFPASFYKHNWGTIGPQVVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIG 581
            DG  A F++H W T+G QV   V+KFF    +   ++ THL LIPKT+ P +  + RPI 
Sbjct: 412  DGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPIS 471

Query: 580  LCNTSYKIIAKLLANRMKSLLDKVISPYQSAFLFSRKISDNIVVAHEIVH-LMXXXXXXX 404
            LC+  YKII+K++A R++  L +++S  QSAF+  R I+DNI+VAHE+VH L        
Sbjct: 472  LCSVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLKVHPRISS 531

Query: 403  XXXXXKIDMSKAFDRVSWEFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKP 239
                 K DMSKA+DRV W +L   LL  GF   W + I  CVS+ + +VL+N  P
Sbjct: 532  EFMAVKSDMSKAYDRVEWSYLRSLLLSLGFHLKWVNWIMVCVSSVTYSVLINDCP 586



 Score = 56.2 bits (134), Expect(2) = 3e-59
 Identities = 30/77 (38%), Positives = 42/77 (54%)
 Frame = -1

Query: 233 IFQTYSRQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLL 54
           I Q   RQGDPLSP+LF++C    + LL   +    + GI+ + N   + HLLFADD L 
Sbjct: 591 ILQRGLRQGDPLSPFLFVLCTEGLTHLLNKAQWEGALEGIQFSENGPMVHHLLFADDSLF 650

Query: 53  FAKADLGECRNLLNIIE 3
             KA   +   L  I++
Sbjct: 651 LCKASREQSLVLQKILK 667


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score =  201 bits (511), Expect(2) = 3e-59
 Identities = 111/295 (37%), Positives = 165/295 (55%), Gaps = 1/295 (0%)
 Frame = -2

Query: 1120 YDTQEEIGKQQSRDNMIALGEKNTKYFHRITLNRRKRNNIDCITDSHGHVVKEKNQIAIV 941
            Y  +E   KQ+SR   +  G +N+KYFH      R+R  I+ + D +G++   +     V
Sbjct: 295  YREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEV 354

Query: 940  LSEYFANLFTAPVVALSSDNLVHIEPVITMTDNLALLRIPDNDEIFGIIKKMKPNRSPGP 761
             + YF NLF +   +  +D    + P ++   N +L+      EI   +  +KP  +PGP
Sbjct: 355  AAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGP 414

Query: 760  DGFPASFYKHNWGTIGPQVVCTVQKFFIQKTLLPYFDKTHLFLIPKTKSPKDPSEFRPIG 581
            DG  A F++H W T+G QV   V+KFF    +   ++ THL LIPKT+ P +  + RPI 
Sbjct: 415  DGMSALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPIS 474

Query: 580  LCNTSYKIIAKLLANRMKSLLDKVISPYQSAFLFSRKISDNIVVAHEIVH-LMXXXXXXX 404
            LC+  YKII+K++A R++  L +++S  QSAF+  R I+DNI+VAHE+VH L        
Sbjct: 475  LCSVLYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLKVHPRISS 534

Query: 403  XXXXXKIDMSKAFDRVSWEFLNKTLLQFGFSQDWCDLIFQCVSTTSIAVLLNGKP 239
                 K DMSKA+DRV W +L   LL  GF   W + I  CVS+ + +VL+N  P
Sbjct: 535  EFMAVKSDMSKAYDRVEWSYLRSLLLSLGFHLKWVNWIMVCVSSVTYSVLINDCP 589



 Score = 56.2 bits (134), Expect(2) = 3e-59
 Identities = 30/77 (38%), Positives = 42/77 (54%)
 Frame = -1

Query: 233 IFQTYSRQGDPLSPYLFIICM*VFSRLLLANEASKRVHGIKMTRNSQPISHLLFADDCLL 54
           I Q   RQGDPLSP+LF++C    + LL   +    + GI+ + N   + HLLFADD L 
Sbjct: 594 ILQRGLRQGDPLSPFLFVLCTEGLTHLLNKAQWEGALEGIQFSENGPMVHHLLFADDSLF 653

Query: 53  FAKADLGECRNLLNIIE 3
             KA   +   L  I++
Sbjct: 654 LCKASREQSLVLQKILK 670