BLASTX nr result

ID: Papaver27_contig00036623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00036623
         (870 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307325.2| hypothetical protein POPTR_0005s19420g, part...    59   2e-06
gb|EXC01181.1| Agamous-like MADS-box protein AGL16 [Morus notabi...    57   9e-06

>ref|XP_002307325.2| hypothetical protein POPTR_0005s19420g, partial [Populus
           trichocarpa] gi|550339320|gb|EEE94321.2| hypothetical
           protein POPTR_0005s19420g, partial [Populus trichocarpa]
          Length = 157

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
 Frame = -3

Query: 694 LKSQVYGN--TSGANRTSLLPNVFSIEDDLNVPVHLQLSQPQQDDHASSEKATKLGYILL 521
           L  +VYG    +GANR SLL N   + ++ +VPVHLQLSQPQQ ++ +   ATKLGY  +
Sbjct: 93  LYKKVYGTREVNGANRNSLLTNGLGMGEESHVPVHLQLSQPQQQNYDTPASATKLGYNFV 152

Query: 520 AYTS 509
             TS
Sbjct: 153 HTTS 156


>gb|EXC01181.1| Agamous-like MADS-box protein AGL16 [Morus notabilis]
          Length = 183

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
 Frame = -3

Query: 694 LKSQVYG--NTSGANRTSLLPNVFSIEDDLNVPVHLQLSQPQQDDHASSEKATKLGY 530
           L  +VYG  + +GANRT+LL +   + ++ + PVHLQLSQPQQ ++ +S +ATKLGY
Sbjct: 118 LYKKVYGTRDVNGANRTALLTDGLGMGENSHGPVHLQLSQPQQQNYETSTRATKLGY 174


Top