BLASTX nr result
ID: Papaver27_contig00036386
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00036386
(704 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prun... 81 4e-13
ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, part... 81 4e-13
ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein A... 75 2e-11
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 75 2e-11
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 75 3e-11
ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, part... 64 7e-11
gb|EPS62007.1| hypothetical protein M569_12785, partial [Genlise... 73 8e-11
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ... 73 8e-11
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 73 8e-11
ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein A... 69 9e-11
ref|XP_006598622.1| PREDICTED: putative ribonuclease H protein A... 73 1e-10
ref|XP_004305133.1| PREDICTED: putative ribonuclease H protein A... 73 1e-10
ref|XP_004301407.1| PREDICTED: putative ribonuclease H protein A... 73 1e-10
ref|XP_007013204.1| Ribonuclease H-like superfamily protein [The... 72 1e-10
ref|XP_007220081.1| hypothetical protein PRUPE_ppa024663mg [Prun... 72 2e-10
ref|XP_007036869.1| Ribonuclease H-like superfamily protein [The... 68 2e-10
ref|XP_006574178.1| PREDICTED: putative ribonuclease H protein A... 71 4e-10
emb|CAN79629.1| hypothetical protein VITISV_002584 [Vitis vinifera] 71 4e-10
ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thalia... 68 4e-10
gb|ABE80156.1| Ribonuclease H [Medicago truncatula] 70 4e-10
>ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
gi|462406722|gb|EMJ12186.1| hypothetical protein
PRUPE_ppa021345mg [Prunus persica]
Length = 759
Score = 80.9 bits (198), Expect = 4e-13
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Frame = +1
Query: 304 NQQLPDKVVWYLSKLGRYTTTSGYISLIQHDNLAQQNPMPRT---------KFIWNLPCP 456
+ +LPD+++W + + G Y+ SGY + + ++NP P + K IW P
Sbjct: 391 SSRLPDRLIWPMERNGSYSVRSGY-HWLHNTECRRRNPRPSSSMTIDPRLWKQIWKADVP 449
Query: 457 PKIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAW 624
PKI+ FLW+A+ L T + LH + S +CP C PETAEH+L+ C W
Sbjct: 450 PKIRNFLWRALRNCLATSANLHKKKIARSPMCPLCNDHPETAEHILLLCPWVEPVW 505
>ref|XP_007199601.1| hypothetical protein PRUPE_ppa023095mg, partial [Prunus persica]
gi|462395001|gb|EMJ00800.1| hypothetical protein
PRUPE_ppa023095mg, partial [Prunus persica]
Length = 933
Score = 80.9 bits (198), Expect = 4e-13
Identities = 40/116 (34%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Frame = +1
Query: 304 NQQLPDKVVWYLSKLGRYTTTSGYISLIQHDNLAQQNPMPRT---------KFIWNLPCP 456
+ +LPD+++W + + G Y+ SGY + + ++NP P + K IW P
Sbjct: 569 SSRLPDRLIWPMERNGSYSVRSGY-HWLHNTECRRRNPRPSSSMAIDQRLWKQIWKADVP 627
Query: 457 PKIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAW 624
PKIQ FLW+A+ L T + LH + S +CP C P+TAEH+L+ C W
Sbjct: 628 PKIQNFLWRALRNCLATSANLHKKKIARSPMCPLCNDHPKTAEHILLLCPWVEPVW 683
>ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 755
Score = 75.5 bits (184), Expect = 2e-11
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Frame = +1
Query: 319 DKVVWYLSKLGRYTTTSGYISLIQHDNLAQQNPMPRTK-------------FIWNLPCPP 459
DK++W + G YT SGY H A +P+ K +IWNL P
Sbjct: 470 DKLIWPHQQSGSYTVRSGY-----HLAQATMTSIPKLKASSSHSVTSAVWKWIWNLQTLP 524
Query: 460 KIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAWIS 630
KI++F+WKA++ + T LH +++ S+LCP C PET EH+L C + W +
Sbjct: 525 KIKIFIWKAVSNFVATKGNLHFRHISQSSLCPICNAFPETIEHVLFTCPWVVCVWFA 581
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 75.1 bits (183), Expect = 2e-11
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 9/128 (7%)
Frame = +1
Query: 268 YNNPTYNQYPPSNQQLPDKVVWYLSKLGRYTTTSGYISLIQHDNLAQQNPMPRT------ 429
+ + + P + Q+ PD+ +W +SK G++T S Y H+ L + P T
Sbjct: 993 WESTAIQRIPVALQKKPDQWMWMMSKNGQFTVRSAYY----HELLEDRKTGPSTSRGPNL 1048
Query: 430 ---KFIWNLPCPPKIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIH 600
+ IW PPK++LF WKAI+ GL ++ + + CPRC ET EH++
Sbjct: 1049 KLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWG 1108
Query: 601 CQVALDAW 624
C + AW
Sbjct: 1109 CDESSRAW 1116
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 74.7 bits (182), Expect = 3e-11
Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 7/110 (6%)
Frame = +1
Query: 316 PDKVVWYLSKLGRYTTTSGYISLIQHD---NLAQQNP----MPRTKFIWNLPCPPKIQLF 474
PDK++W + G YT SGY L+ HD N+ NP + IWNLP PK++ F
Sbjct: 1156 PDKIIWNYNTTGEYTVRSGYW-LLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHF 1214
Query: 475 LWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAW 624
LW+A+++ L T L + +CPRC E+ H L C A AW
Sbjct: 1215 LWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALFTCPFATMAW 1264
>ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
gi|462403441|gb|EMJ08998.1| hypothetical protein
PRUPE_ppa024472mg, partial [Prunus persica]
Length = 920
Score = 63.9 bits (154), Expect(2) = 7e-11
Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 8/127 (6%)
Frame = +1
Query: 286 NQYPPSNQQLPDKVVWYLSKLGRYTTTSGY-ISLIQHDNLAQQNPMPRT------KFIWN 444
N+ P N D++VW +K G Y+ SGY + ++ + N K IW
Sbjct: 550 NEVPIGNLHREDRIVWPWNKSGLYSVKSGYNLQVVSASYIGGYNRSSHVIERGVWKDIWA 609
Query: 445 LPCPPKIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAW 624
P PK++ FLW+ + LPT L+ + +S CP C E+ EH + C W
Sbjct: 610 SPTLPKVKFFLWRMMVRALPTKLNLYRRRIISSPFCPICNQYEESEEHAIFLCPWTQAVW 669
Query: 625 I-SLFNY 642
S NY
Sbjct: 670 FGSPLNY 676
Score = 29.6 bits (65), Expect(2) = 7e-11
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 6/81 (7%)
Frame = +2
Query: 89 VKKNIFHRVGNGLNTPIQAN--*IPHYQN----LDSAQCYHIQTVDDIIDPSTYNWKHDQ 250
+K+NI H+V NG NT I + +P +Q L + Q V +I+D T W
Sbjct: 477 IKENIRHQVFNGHNTKIWEDRWLLPPHQGYVVPLITVPLNAPQLVSEILDGQTRTWNTQA 536
Query: 251 LSNLPPTTIQHIINIHLPINN 313
L+ +IN +PI N
Sbjct: 537 LAQYVSQDTIKLIN-EVPIGN 556
>gb|EPS62007.1| hypothetical protein M569_12785, partial [Genlisea aurea]
Length = 317
Score = 73.2 bits (178), Expect = 8e-11
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Frame = +1
Query: 289 QYPPSNQQLPDKVVWYLSKLGRYTTTSGYISLIQHDNLAQQNP----MPRTKF---IWNL 447
Q P + + D +W+ +K G Y+T SGY L + P + +T F +W
Sbjct: 193 QLPVAKHRAEDTFLWHYTKKGCYSTASGYFLLQNGGGDSMVGPSNHQLQQTNFWTNLWQF 252
Query: 448 PCPPKIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAW 624
P PPK+ F+W+ + LPT LH +LT+S+ C C + E H+ + C A W
Sbjct: 253 PIPPKVTYFIWRLCSNILPTRQELHRRHLTSSSECSICSSHSENWRHLFLECNFATAVW 311
>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
reverse transcriptase [Arabidopsis thaliana]
gi|332641254|gb|AEE74775.1| RNase H domain-containing
protein [Arabidopsis thaliana]
Length = 484
Score = 73.2 bits (178), Expect = 8e-11
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Frame = +1
Query: 316 PDKVVWYLSKLGRYTTTSGYISLIQHD---NLAQQNP----MPRTKFIWNLPCPPKIQLF 474
PDK++W + G YT SGY L+ HD N+ NP + IWNLP PK++ F
Sbjct: 116 PDKIIWNYNTTGEYTVRSGYW-LLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHF 174
Query: 475 LWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAW 624
LW+A+++ L T L + CPRC E+ H L C A AW
Sbjct: 175 LWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAW 224
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 73.2 bits (178), Expect = 8e-11
Identities = 41/110 (37%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Frame = +1
Query: 316 PDKVVWYLSKLGRYTTTSGYISLIQHD---NLAQQNP----MPRTKFIWNLPCPPKIQLF 474
PDK++W + G YT SGY L+ HD N+ NP + IWNLP PK++ F
Sbjct: 1382 PDKIIWNYNTTGEYTVRSGYW-LLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHF 1440
Query: 475 LWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAW 624
LW+A+++ L T L + CPRC E+ H L C A AW
Sbjct: 1441 LWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAW 1490
>ref|XP_004301440.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 786
Score = 68.6 bits (166), Expect(2) = 9e-11
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Frame = +1
Query: 319 DKVVWYLSKLGRYTTTSGYISLIQHDNLAQQNPMPRT-----------KFIWNLPCPPKI 465
D+++W SK G +T SGY L Q ++ +P+ T + +W +P PK+
Sbjct: 442 DRLLWPWSKNGSFTVKSGYHWLHQQSSM-NASPLVITGTSHRVGKKMWRLLWGMPTLPKV 500
Query: 466 QLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAW 624
+LF W+ + P FS L+ LT+S +CP C ET EH+L+ C W
Sbjct: 501 KLFFWQVMGGVGPNFSNLYKRKLTSSPMCPLCGLEDETFEHLLLLCSWVSPIW 553
Score = 24.6 bits (52), Expect(2) = 9e-11
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 197 QTVDDIIDPSTYNWKHDQLSNL 262
Q VD +ID T+ W+ D ++N+
Sbjct: 400 QLVDSLIDWDTHTWRLDGVANV 421
>ref|XP_006598622.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 174
Score = 72.8 bits (177), Expect = 1e-10
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Frame = +1
Query: 319 DKVVWYLSKLGRYTTTSGYISLIQHDNLAQQNPMPRTKFIWNLPCPPKIQLFLWKAINEG 498
D+ W G+Y+T + Y + D + N + K IW L PPK+ +F W+ I +
Sbjct: 45 DEWTWLAETTGQYSTKNAYDEMWGAD--IEGNQLQELKDIWKLKIPPKVAVFAWRLIRDR 102
Query: 499 LPTFSLL--HHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAWISLFNYI 645
LPT S L H+ + NS+ CP C+ E A H+ +HC L W +++
Sbjct: 103 LPTKSNLTRRHVEINNSS-CPFCRRVEEDAAHLFLHCDKVLPLWWECMSWV 152
>ref|XP_004305133.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 527
Score = 72.8 bits (177), Expect = 1e-10
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Frame = +1
Query: 304 NQQLPDKVVWYLSKLGRYTTTSGYISL--------IQHDNLAQQNPMPRTKFIWNLPCPP 459
+Q + D+++W +K G+Y+ SGY L QH + + + K +W+ P
Sbjct: 402 DQSMLDRIIWPETKSGQYSVKSGYHFLHSQDCKPTTQHAHSSHRLNHIVWKTVWSTQTTP 461
Query: 460 KIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAWISLFN 639
KI FLW+ + LP++ LH + S LCP C PE+ EH+ + C A+ AW +
Sbjct: 462 KITNFLWRILANALPSYLNLHKRKIIPSPLCPVCDMFPESIEHIFLQCPGAVCAWFASDL 521
Query: 640 YITTN 654
Y N
Sbjct: 522 YYKIN 526
>ref|XP_004301407.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 612
Score = 72.8 bits (177), Expect = 1e-10
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
Frame = +1
Query: 301 SNQQLPDKVVWYLSKLGRYTTTSGYISLIQHDNLAQQNPMPRTKF---------IWNLPC 453
S + D+++W +K G YT SGY +L+ NL + + IW++
Sbjct: 216 SESDIDDRLIWSPTKNGSYTVKSGY-NLLHSLNLKPSRQLSHSSHRVHPSVCSTIWSIQT 274
Query: 454 PPKIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAWIS 630
PKI+ FLW+ +N + T+ L+ + +S LC RC ET EH L+ C +A W +
Sbjct: 275 LPKIKHFLWQVVNNAISTYQNLYQKKIISSPLCQRCGLASETIEHTLLLCPIATCTWFA 333
>ref|XP_007013204.1| Ribonuclease H-like superfamily protein [Theobroma cacao]
gi|508783567|gb|EOY30823.1| Ribonuclease H-like
superfamily protein [Theobroma cacao]
Length = 536
Score = 72.4 bits (176), Expect = 1e-10
Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Frame = +1
Query: 262 PTYNNPTYNQYPPSNQQLPDKVVWYLSKLGRYTTTSGY-----ISLIQHDNLAQQNPMPR 426
PTY P S + DK VW+ ++ G Y+ SGY + +Q + N M
Sbjct: 199 PTYERELILSIPLSYRHPNDKQVWFFNRHGHYSVKSGYRMAQSLLDLQVAESSSCNMMAF 258
Query: 427 TKFIWNLPCPPKIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQ 606
K IW+L P K+ LFLWK +N LPT L + ++ + N CP C ET H L C
Sbjct: 259 WKRIWHLELPRKVILFLWKTLNGILPTRQALIYRSIISENNCPSCDNELETDFHCLCCCP 318
Query: 607 VA 612
+A
Sbjct: 319 LA 320
>ref|XP_007220081.1| hypothetical protein PRUPE_ppa024663mg [Prunus persica]
gi|462416543|gb|EMJ21280.1| hypothetical protein
PRUPE_ppa024663mg [Prunus persica]
Length = 681
Score = 71.6 bits (174), Expect = 2e-10
Identities = 40/120 (33%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Frame = +1
Query: 295 PPSNQQLPDKVVWYLSKLGRYTTTSGY--ISLIQHDNLAQQNPMPRT------KFIWNLP 450
P + PD++VW + G YT SGY Q+ N+A N K IW +
Sbjct: 375 PIGHSSRPDRLVWPWNSSGSYTVKSGYHRFHARQNTNIASHNHTSHIVSERVWKTIWKVE 434
Query: 451 CPPKIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAWIS 630
PKI+LFLW+A++ + T L I + +CP C+ E+ EH+L C WIS
Sbjct: 435 TLPKIKLFLWRALSRSISTRFALFKIKIATDPICPICEGFEESVEHILFLCPGTQLVWIS 494
>ref|XP_007036869.1| Ribonuclease H-like superfamily protein [Theobroma cacao]
gi|508774114|gb|EOY21370.1| Ribonuclease H-like
superfamily protein [Theobroma cacao]
Length = 569
Score = 67.8 bits (164), Expect(2) = 2e-10
Identities = 43/128 (33%), Positives = 61/128 (47%), Gaps = 5/128 (3%)
Frame = +1
Query: 262 PTYNNPTYNQYPPSNQQLPDKVVWYLSKLGRYTTTSGY--ISLIQHDN---LAQQNPMPR 426
P Y + P S + D+ V +SK G+YT GY IS + D+ + +
Sbjct: 183 PLYESNLILSIPLSVRLSVDRQVRVVSKHGQYTVKFGYRLISSLLDDSEPGCSSDSFDGF 242
Query: 427 TKFIWNLPCPPKIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQ 606
K +W L P KI F+WKA+ LPT L H + N+C C+ ET H+L +CQ
Sbjct: 243 WKEVWKLSIPRKIIFFMWKALKGALPTKKALSHRKINVDNICVFCQEDEETDFHILCYCQ 302
Query: 607 VALDAWIS 630
A W+S
Sbjct: 303 FARATWLS 310
Score = 23.9 bits (50), Expect(2) = 2e-10
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Frame = +2
Query: 59 WKQMTSLVPFVKKNIFHRVGNGLNTPIQAN*IPHYQNLDSAQCY-----HIQTVDDIIDP 223
W+ + +KK + RVGNG + + + Y+ A Y + V ++ID
Sbjct: 109 WRSIKESQQIIKKGLVWRVGNGNDIQVLEDSWIPYETPRVAMAYEENVSNSMMVSELIDA 168
Query: 224 STYNW 238
W
Sbjct: 169 RCGKW 173
>ref|XP_006574178.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 393
Score = 70.9 bits (172), Expect = 4e-10
Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +1
Query: 304 NQQLPDKVVWYLSKLGRYTTTSGYISLIQHDNLAQQNPMPRTKFIWNLPCPPKIQLFLWK 483
+QQL D ++W +G Y+T S Y L+ + Q + K +W L PP+ +LF W+
Sbjct: 186 HQQLQDSMLWKADPIGIYSTKSAYRLLLPTNRPGQHSR--NFKILWKLKIPPRAELFSWR 243
Query: 484 AINEGLPTFS--LLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAWISLFNYITT 651
+ LPT + L H+ L + +CP C E A H+ HC++ + W N+ T
Sbjct: 244 LFRDRLPTRANLLRRHVALQDI-MCPLCGNHQEEAGHLFFHCRMTVGLWWESMNWTRT 300
>emb|CAN79629.1| hypothetical protein VITISV_002584 [Vitis vinifera]
Length = 964
Score = 70.9 bits (172), Expect = 4e-10
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Frame = +1
Query: 313 LPDKVVWYLSKLGRYTTTSGYISLIQHDNLAQQNPMPRTKFIWNLPCPPKIQLFLWKAIN 492
+PDK W LS LG +T S +++L Q+ ++ P+ TKF+WN P K++ F+W +
Sbjct: 638 VPDKRSWSLSPLGLFTVKSFFLALSQY---SESPPVFPTKFVWNSQVPFKVKSFVWLVAH 694
Query: 493 EGLPTFSLLH----HINLTNSNLCPRCKTTPETAEHMLIHCQVALDAWISLFNYITTN 654
+ + T LL H L+ ++C C ET +H+ +HC + + W LF T+
Sbjct: 695 KKVNTNDLLQLRRPHKALS-PDICKLCMKHEETVDHLFLHCSLTMGLWYILFQLAKTD 751
>ref|NP_194638.1| ribonuclease H-like protein [Arabidopsis thaliana]
gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
thaliana] gi|7269807|emb|CAB79667.1| putative protein
[Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
putative reverse transcriptase/RNA-dependent DNA
polymerase [Arabidopsis thaliana]
gi|332660185|gb|AEE85585.1| ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 575
Score = 68.2 bits (165), Expect(2) = 4e-10
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Frame = +1
Query: 262 PTYNNPTYNQYPPSNQQLPDKVVWYLSKLGRYTTTSGYISLIQHDN-------LAQQNPM 420
P + P +++ D W + G YT SGY L Q N +++ +
Sbjct: 192 PEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLN 251
Query: 421 PRTKFIWNLPCPPKIQLFLWKAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIH 600
P + IW PKIQ FLWK ++ LP L + +L+ + C RC + ET H+L
Sbjct: 252 PIYQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFK 311
Query: 601 CQVALDAW 624
C A W
Sbjct: 312 CTFARLTW 319
Score = 22.7 bits (47), Expect(2) = 4e-10
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 194 IQTVDDIIDPSTYNWKHDQLSNLPPTTIQHII 289
I V D+ID S W+ D + L P + +I
Sbjct: 168 ILKVSDLIDESGREWRKDVIEMLFPEVERKLI 199
>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
Length = 438
Score = 69.7 bits (169), Expect(2) = 4e-10
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Frame = +1
Query: 304 NQQLPDKVVWYLSKLGRYTTTSGYISLIQHDNLAQQN-PMPRTKFIWNLPCPPKIQLFLW 480
N + D ++W +K G Y+T SG+ L+ A P P +IWNL P K + +W
Sbjct: 78 NDNIEDALIWSQNKNGTYSTKSGFHWLLTFRVPATDIIPHPSWSWIWNLQVPEKYKFLIW 137
Query: 481 KAINEGLPTFSLLHHINLTNSNLCPRCKTTPETAEHMLIHCQVALDAW 624
A +PT SLLH N+ S C RC ET H + C + W
Sbjct: 138 LACQNVVPTLSLLHRRNIAPSPTCARCGEEDETFLHCVRDCHFSRSIW 185
Score = 21.2 bits (43), Expect(2) = 4e-10
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 254 SNLPPTTIQHIINIHLPINNS 316
+NLP HI N H+ N++
Sbjct: 60 TNLPLAVENHINNFHIHFNDN 80