BLASTX nr result
ID: Papaver27_contig00036049
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00036049
(680 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 155 5e-42
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 159 1e-41
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript... 159 1e-41
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 152 8e-39
ref|XP_007219602.1| hypothetical protein PRUPE_ppa023113mg, part... 166 8e-39
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 143 1e-38
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 143 1e-38
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 147 2e-38
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 151 2e-38
ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, part... 163 4e-38
gb|AAD21778.1| putative non-LTR retroelement reverse transcripta... 149 8e-38
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 149 8e-38
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 140 2e-37
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 140 2e-37
ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304... 152 3e-37
gb|AAB48348.1| reverse transcriptase, partial [Arabidopsis thali... 133 2e-36
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 157 4e-36
gb|ABA97040.1| retrotransposon protein, putative, unclassified [... 139 9e-36
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 150 9e-36
gb|ABF95850.1| retrotransposon protein, putative, unclassified [... 144 1e-35
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 155 bits (391), Expect(2) = 5e-42
Identities = 81/178 (45%), Positives = 112/178 (62%)
Frame = +2
Query: 143 QKSSHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFH 322
+K + FRPISLC+V YK+I K++ NR++ + P LIS Q AFV + I DNI IA EL H
Sbjct: 499 EKMTDFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHELLH 558
Query: 323 YIRTSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVN 502
+ ++ IA+K DI KAYD ++ F+ K LGF + ++ IM C+ S Y V
Sbjct: 559 ALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVL 618
Query: 503 INGTPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL*IYQKARPI 676
INGTPHG I P RG+R+GDP+S Y+F+I E+L L + E K + GL + + A PI
Sbjct: 619 INGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKVARGAPPI 676
Score = 43.1 bits (100), Expect(2) = 5e-42
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +1
Query: 16 FKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKV 135
++ FWET Q+ +MV++FF S +I MN TNI LIPK+
Sbjct: 456 YQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKI 495
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 159 bits (402), Expect(2) = 1e-41
Identities = 81/169 (47%), Positives = 115/169 (68%)
Frame = +2
Query: 143 QKSSHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFH 322
+K + FRPISLC+V+YK+ISK+L +R++ L P LIS Q AFV ++ I DNI IA E FH
Sbjct: 446 RKMAEFRPISLCNVSYKVISKVLSSRLKRLLPELISETQSAFVAERLITDNILIAQENFH 505
Query: 323 YIRTSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVN 502
+RT+ K +A+K D+ KAYD ++ F+R K+GF +VD+I+ CISS +Y +
Sbjct: 506 ALRTNPACKKKYMAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKIL 565
Query: 503 INGTPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL 649
+NG+P GFI P RGIR+GDPIS ++FI+ E L L + E ++GL
Sbjct: 566 LNGSPKGFIKPSRGIRQGDPISPFLFILCTEALVAKLKDAEWHGRIQGL 614
Score = 37.7 bits (86), Expect(2) = 1e-41
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 4 TSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPK 147
T+ F++ +W+ T L+ +V++F + +N TNI LIPK + P+
Sbjct: 399 TAFFYQHYWDLTGPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPR 446
>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 400
Score = 159 bits (402), Expect(2) = 1e-41
Identities = 81/169 (47%), Positives = 115/169 (68%)
Frame = +2
Query: 143 QKSSHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFH 322
+K + FRPISLC+V+YK+ISK+L +R++ L P LIS Q AFV ++ I DNI IA E FH
Sbjct: 80 RKMAEFRPISLCNVSYKVISKVLSSRLKRLLPELISETQSAFVAERLITDNILIAQENFH 139
Query: 323 YIRTSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVN 502
+RT+ K +A+K D+ KAYD ++ F+R K+GF +VD+I+ CISS +Y +
Sbjct: 140 ALRTNPACKKKYMAIKTDMSKAYDRVEWSFLRALMLKMGFAQKWVDWIIFCISSVSYKIL 199
Query: 503 INGTPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL 649
+NG+P GFI P RGIR+GDPIS ++FI+ E L L + E ++GL
Sbjct: 200 LNGSPKGFIKPSRGIRQGDPISPFLFILCTEALVAKLKDAEWHGRIQGL 248
Score = 37.7 bits (86), Expect(2) = 1e-41
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 4 TSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPK 147
T+ F++ +W+ T L+ +V++F + +N TNI LIPK + P+
Sbjct: 33 TAFFYQHYWDLTGPDLIKLVQNFHSTGFFDERLNETNICLIPKTERPR 80
>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
Length = 1023
Score = 152 bits (383), Expect(2) = 8e-39
Identities = 76/168 (45%), Positives = 109/168 (64%)
Frame = +2
Query: 146 KSSHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFHY 325
+ + RPISLC+V YKIISKIL R++ + P LIS AFV + I DNI IA E+FH
Sbjct: 350 RMTELRPISLCNVGYKIISKILCQRLKKILPSLISETHSAFVEGRLISDNILIAQEMFHG 409
Query: 326 IRTSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVNI 505
+RT+ K +A+K D+ KAYD ++ FI + K+GF ++ +IM CI++ Y V +
Sbjct: 410 LRTNPSCKGKFMAIKTDMSKAYDRVEWNFIEELLKKMGFCEKWISWIMWCITTVQYRVLL 469
Query: 506 NGTPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL 649
NG P G I P RG+R+GDP+S Y+FI+ E+L N+ E +KL+ G+
Sbjct: 470 NGQPRGLIVPKRGLRQGDPLSPYLFILCTEVLIANIRKAEQEKLITGI 517
Score = 35.4 bits (80), Expect(2) = 8e-39
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 4 TSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPKIIT 156
T+ FF+ W T ++ ++ +V SF +N TNI LIPK + P +T
Sbjct: 302 TALFFQKPWATIKMDMLFLVNSFLQDGVFDKQLNTTNICLIPKTERPTRMT 352
>ref|XP_007219602.1| hypothetical protein PRUPE_ppa023113mg, partial [Prunus persica]
gi|462416064|gb|EMJ20801.1| hypothetical protein
PRUPE_ppa023113mg, partial [Prunus persica]
Length = 851
Score = 166 bits (419), Expect = 8e-39
Identities = 75/166 (45%), Positives = 119/166 (71%)
Frame = +2
Query: 152 SHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFHYIR 331
+HFRPISLC+ +YKI+SK+L NR++ L P LIS +Q AF+P + I DNI +A E FHY+R
Sbjct: 109 NHFRPISLCNNSYKILSKLLANRLKTLLPMLISQHQNAFIPGRQIQDNILLAHEAFHYLR 168
Query: 332 TSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVNING 511
+ K+ ++ LKLD+ KAYD ++ +F+ T K GF N +V+ +MLC+ + T+S+ +NG
Sbjct: 169 LKSSKKSFELGLKLDMNKAYDRIEWDFLEATLCKFGFDNRWVELVMLCVKTITFSLVLNG 228
Query: 512 TPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL 649
+P +P RG+R+GDP+S Y+F++ +E+LS N+ N +++G+
Sbjct: 229 SPGSPFSPSRGLRQGDPLSPYLFLLVSEVLSLNIINSTDTGMLRGI 274
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 143 bits (361), Expect(2) = 1e-38
Identities = 69/151 (45%), Positives = 102/151 (67%)
Frame = +2
Query: 152 SHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFHYIR 331
S +RPI+LC+V YK+ISK LVNR++ ++S Q AF+P + I+DN+ IA E+ H ++
Sbjct: 884 SDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLK 943
Query: 332 TSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVNING 511
+A+K D+ KAYD ++ +F+ T GF N ++ +IM + S YSV ING
Sbjct: 944 VRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLING 1003
Query: 512 TPHGFITPMRGIRKGDPISSYIFIIYAEILS 604
+PHG+ITP RGIR+GDP+S Y+FI+ +ILS
Sbjct: 1004 SPHGYITPTRGIRQGDPLSPYLFILCGDILS 1034
Score = 43.1 bits (100), Expect(2) = 1e-38
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +1
Query: 4 TSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPKIITLQTYQ 171
T++F+K W+ ++ V+ FF + + P +NHTNI +IPK+ +P TL Y+
Sbjct: 834 TARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNP--TTLSDYR 887
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 143 bits (361), Expect(2) = 1e-38
Identities = 69/151 (45%), Positives = 102/151 (67%)
Frame = +2
Query: 152 SHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFHYIR 331
S +RPI+LC+V YK+ISK LVNR++ ++S Q AF+P + I+DN+ IA E+ H ++
Sbjct: 658 SDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLK 717
Query: 332 TSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVNING 511
+A+K D+ KAYD ++ +F+ T GF N ++ +IM + S YSV ING
Sbjct: 718 VRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLING 777
Query: 512 TPHGFITPMRGIRKGDPISSYIFIIYAEILS 604
+PHG+ITP RGIR+GDP+S Y+FI+ +ILS
Sbjct: 778 SPHGYITPTRGIRQGDPLSPYLFILCGDILS 808
Score = 43.1 bits (100), Expect(2) = 1e-38
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +1
Query: 4 TSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPKIITLQTYQ 171
T++F+K W+ ++ V+ FF + + P +NHTNI +IPK+ +P TL Y+
Sbjct: 608 TARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNP--TTLSDYR 661
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 147 bits (372), Expect(2) = 2e-38
Identities = 76/169 (44%), Positives = 105/169 (62%)
Frame = +2
Query: 143 QKSSHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFH 322
Q+ S RPISLC V YKIISKIL R++ P ++S Q AFVPQ+ I DNI +A E+ H
Sbjct: 498 QRMSDLRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDNILVAHEMIH 557
Query: 323 YIRTSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVN 502
+RT+ +A K D+ KAYD ++ F+ T LGF N ++ +IM C++S +YSV
Sbjct: 558 SLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIMNCVTSVSYSVL 617
Query: 503 INGTPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL 649
ING P+G I P RGIR+GDP+S +F++ E L L E + G+
Sbjct: 618 INGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGI 666
Score = 38.1 bits (87), Expect(2) = 2e-38
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 1 YTSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPK 147
+T+ FF+ W+ + Q++ + FF + + NHT+I LIPK+ SP+
Sbjct: 450 FTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICLIPKITSPQ 498
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 151 bits (381), Expect(2) = 2e-38
Identities = 76/168 (45%), Positives = 110/168 (65%)
Frame = +2
Query: 146 KSSHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFHY 325
+ + RPISLC+V YK+ISKIL R++ + P LIS Q AFV + I DNI IA E+FH
Sbjct: 284 RMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEMFHG 343
Query: 326 IRTSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVNI 505
+RT++ K+ +A+K D+ KAYD ++ FI K+GF ++ +IM CI++ Y V I
Sbjct: 344 LRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLI 403
Query: 506 NGTPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL 649
NG P G I P RG+R+GDP+S Y+FI+ E+L N+ E + L+ G+
Sbjct: 404 NGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGI 451
Score = 34.7 bits (78), Expect(2) = 2e-38
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 4 TSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPKIIT 156
T+ FF+ W + L+ +V SF +N TNI LIPK + P +T
Sbjct: 236 TALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMT 286
>ref|XP_007207581.1| hypothetical protein PRUPE_ppa018489mg, partial [Prunus persica]
gi|462403223|gb|EMJ08780.1| hypothetical protein
PRUPE_ppa018489mg, partial [Prunus persica]
Length = 1146
Score = 163 bits (413), Expect = 4e-38
Identities = 75/166 (45%), Positives = 118/166 (71%)
Frame = +2
Query: 152 SHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFHYIR 331
+HFRPISLC+ +YKI+SK+L NR++ L P LIS +Q AFVP + I DNI +A E FHY+R
Sbjct: 413 NHFRPISLCNNSYKILSKLLANRLKTLLPMLISQHQNAFVPGRQIQDNILLAHEAFHYLR 472
Query: 332 TSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVNING 511
+ K+ ++ LKLD+ KAYD ++ +F+ T K F N +V+ +MLC+ + T+S+ +NG
Sbjct: 473 LKSSKKSFELGLKLDMNKAYDRVEWDFLEATLCKFSFDNRWVELVMLCVKTITFSLVLNG 532
Query: 512 TPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL 649
+P +P RG+R+GDP+S Y+F++ +E+LS N+ N +++G+
Sbjct: 533 SPGSPFSPSRGLRQGDPLSPYLFLLVSEVLSLNIINSTDTGMLRGI 578
>gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1715
Score = 149 bits (376), Expect(2) = 8e-38
Identities = 75/166 (45%), Positives = 110/166 (66%)
Frame = +2
Query: 152 SHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFHYIR 331
S +RPISLC +YKIISKIL+ R++ +IS Q AFVP ++I DN+ +A EL H ++
Sbjct: 864 SDYRPISLCTASYKIISKILIKRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHSLK 923
Query: 332 TSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVNING 511
+ ++ +A+K DI KAYD ++ F+ K +LGF +V +IM C++S +Y V ING
Sbjct: 924 SRRECQSGYVAVKTDISKAYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLING 983
Query: 512 TPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL 649
+P+G I P RGIR+GDP+S Y+F+ AE+LS L E K + G+
Sbjct: 984 SPYGKIFPSRGIRQGDPLSPYLFLFCAEVLSNMLRKAEVNKQIHGM 1029
Score = 34.7 bits (78), Expect(2) = 8e-38
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +1
Query: 1 YTSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPK 147
+T+ F+ W+ + MVR FF S + +N T I LIPK+ PK
Sbjct: 813 FTAAFYHHLWDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPK 861
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 149 bits (376), Expect(2) = 8e-38
Identities = 67/154 (43%), Positives = 111/154 (72%)
Frame = +2
Query: 143 QKSSHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFH 322
+K + +RPI+LC++ YKI++KI+ R++ + P LIS Q AFVP + I DN+ I E+ H
Sbjct: 394 RKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNVLITHEVLH 453
Query: 323 YIRTSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVN 502
++RTS+ K+ +A+K D+ KAYD ++ +F++K + GF +I++D+++ C++S +YS
Sbjct: 454 FLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYSFL 513
Query: 503 INGTPHGFITPMRGIRKGDPISSYIFIIYAEILS 604
INGTP G + P RG+R+GDP+S +FI+ E+LS
Sbjct: 514 INGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLS 547
Score = 34.7 bits (78), Expect(2) = 8e-38
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +1
Query: 1 YTSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPK 147
+T+ F+ +W + +R FF S N MN T+I LIPK P+
Sbjct: 346 FTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIPKDLGPR 394
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 140 bits (353), Expect(2) = 2e-37
Identities = 69/166 (41%), Positives = 106/166 (63%)
Frame = +2
Query: 152 SHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFHYIR 331
S +RPI+LC+V YKIISK LV R++ ++S Q AF+P + ++DN+ IA E+ H ++
Sbjct: 884 SDYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLK 943
Query: 332 TSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVNING 511
T +A+K D+ KAYD ++ F+ T GF ++ +IM + S YSV +NG
Sbjct: 944 TRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIMGAVKSVNYSVLVNG 1003
Query: 512 TPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL 649
PHG I P RGIR+GDP+S Y+FI+ A+IL+ + N A+ ++G+
Sbjct: 1004 IPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGI 1049
Score = 42.4 bits (98), Expect(2) = 2e-37
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +1
Query: 4 TSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPKIITLQTYQ 171
T++F+K WE ++ V+ FF + + +NHTNI +IPK+ +P+ TL Y+
Sbjct: 834 TARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPE--TLSDYR 887
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 140 bits (353), Expect(2) = 2e-37
Identities = 69/166 (41%), Positives = 106/166 (63%)
Frame = +2
Query: 152 SHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFHYIR 331
S +RPI+LC+V YKIISK LV R++ ++S Q AF+P + ++DN+ IA E+ H ++
Sbjct: 864 SDYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLK 923
Query: 332 TSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVNING 511
T +A+K D+ KAYD ++ F+ T GF ++ +IM + S YSV +NG
Sbjct: 924 TRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSETWIKWIMGAVKSVNYSVLVNG 983
Query: 512 TPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL 649
PHG I P RGIR+GDP+S Y+FI+ A+IL+ + N A+ ++G+
Sbjct: 984 IPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVAEGDIRGI 1029
Score = 42.4 bits (98), Expect(2) = 2e-37
Identities = 20/56 (35%), Positives = 34/56 (60%)
Frame = +1
Query: 4 TSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPKIITLQTYQ 171
T++F+K WE ++ V+ FF + + +NHTNI +IPK+ +P+ TL Y+
Sbjct: 814 TARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMIPKITNPE--TLSDYR 867
>ref|XP_004298219.1| PREDICTED: uncharacterized protein LOC101304768 [Fragaria vesca
subsp. vesca]
Length = 1687
Score = 152 bits (384), Expect(2) = 3e-37
Identities = 79/178 (44%), Positives = 114/178 (64%)
Frame = +2
Query: 143 QKSSHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFH 322
Q + FRPISLC+V YK+ISK +VNR++ L P +IS YQ AFVP + IHDN+ A E+ H
Sbjct: 503 QGVADFRPISLCNVLYKLISKAMVNRMKVLLPEVISCYQSAFVPGRCIHDNVVTAFEVIH 562
Query: 323 YIRTSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVN 502
IR +P LKLDI KAYD ++ F+R KLGF +V+ +M C+ S ++S+
Sbjct: 563 SIRNKQTGTHPYCVLKLDISKAYDRVEWIFLRNIMLKLGFSERWVELVMKCVESVSFSIL 622
Query: 503 INGTPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL*IYQKARPI 676
NG G I RG+R+GDP+S Y+F++ +E L++ N+E + LV G + + + PI
Sbjct: 623 WNGKAMGMINLSRGLRQGDPLSPYLFLLCSEGLTSLFQNVEREGLVHGAKVSEGSPPI 680
Score = 29.6 bits (65), Expect(2) = 3e-37
Identities = 11/49 (22%), Positives = 27/49 (55%)
Frame = +1
Query: 1 YTSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPK 147
++++F++ +WE ++ + +NHT + LIPK+++P+
Sbjct: 455 FSARFYQAYWEIVGDEVSNRCLQVLNEGASVKDLNHTLLALIPKIENPQ 503
>gb|AAB48348.1| reverse transcriptase, partial [Arabidopsis thaliana]
Length = 199
Score = 133 bits (335), Expect(2) = 2e-36
Identities = 66/141 (46%), Positives = 95/141 (67%)
Frame = +2
Query: 143 QKSSHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFH 322
++ + FRPISLC+V+YK+ISK+L +R++ + P LIS Q AFV + I DNI +A E FH
Sbjct: 55 RRMAEFRPISLCNVSYKVISKVLSSRLKKILPDLISETQSAFVAGRLITDNILVAQENFH 114
Query: 323 YIRTSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVN 502
+RT+ + +A+K D+ KAY ++ F+R K+GF +VD IM C+SS +Y V
Sbjct: 115 ALRTNPACRKKFMAIKTDMSKAYGRVEWSFLRALMLKMGFAQKWVDLIMFCVSSVSYKVL 174
Query: 503 INGTPHGFITPMRGIRKGDPI 565
+NG P GFI P RGIR+G P+
Sbjct: 175 LNGAPRGFIKPTRGIRQGYPL 195
Score = 45.8 bits (107), Expect(2) = 2e-36
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +1
Query: 4 TSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPK 147
T+ F++ FW+ T LV +V++F S + +N TNI LIPK+D P+
Sbjct: 8 TALFYQRFWDLTGPDLVKVVQNFHSSASFDERLNETNICLIPKIDRPR 55
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 157 bits (396), Expect = 4e-36
Identities = 80/169 (47%), Positives = 113/169 (66%)
Frame = +2
Query: 143 QKSSHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFH 322
+K + FRPISLC+V Y+I++K + NR++P+ +IS Q AF+P + I DN+ I E H
Sbjct: 477 KKVTEFRPISLCNVIYRIVAKTIANRLKPILSQIISPTQSAFIPNRLISDNVIIGYECLH 536
Query: 323 YIRTSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVN 502
IR S K +ALKLDI KAYD ++ F+++T KLGF +++ IM CI+S ++SV
Sbjct: 537 KIRHSQGKKKGLVALKLDISKAYDRVEWTFLKQTMKKLGFSRKWLELIMGCITSVSFSVI 596
Query: 503 INGTPHGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL 649
INGTP GF P RG+R+G P+S Y+FII E+ S+ L E KK + GL
Sbjct: 597 INGTPKGFFHPERGLRQGCPLSPYLFIICTEVFSSLLLQAETKKRISGL 645
>gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1913
Score = 139 bits (350), Expect(2) = 9e-36
Identities = 69/146 (47%), Positives = 95/146 (65%)
Frame = +2
Query: 158 FRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFHYIRTS 337
FRPISLC+V YKI+SK LVNR+RP+ L+S Q AFVP + I DN +A E FH+I+ +
Sbjct: 1079 FRPISLCNVIYKIVSKCLVNRLRPILDELVSQNQSAFVPGRMITDNALLAFECFHFIQRN 1138
Query: 338 TITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVNINGTP 517
A KLD+ KAYD +D F+ +T KLGF ++ +IM C+SS YS+ NGT
Sbjct: 1139 KNANKAACAYKLDLSKAYDRVDWVFLEQTMCKLGFAPRWIKWIMTCLSSVRYSIKFNGTL 1198
Query: 518 HGFITPMRGIRKGDPISSYIFIIYAE 595
P RG+R+GDP+S ++F+ A+
Sbjct: 1199 LDTFAPSRGLRQGDPLSPFLFLFVAD 1224
Score = 37.7 bits (86), Expect(2) = 9e-36
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +1
Query: 1 YTSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSP 144
+ ++FF+ W+ + +V V+SFF + + +N T I LIPKVD P
Sbjct: 1026 FPARFFQRNWDAIKKDVVSAVKSFFETSIMPEGVNDTAIVLIPKVDQP 1073
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 150 bits (378), Expect(2) = 9e-36
Identities = 74/173 (42%), Positives = 110/173 (63%)
Frame = +2
Query: 158 FRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFHYIRTS 337
FRPISLC+V YKI++K+L NR++ + P +I Q FVP + I DN+ +A E FH++R
Sbjct: 513 FRPISLCNVLYKIVAKVLANRMKMVLPMVIHESQSGFVPGRLITDNVLVAYECFHFLRKK 572
Query: 338 TITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVNINGTP 517
K + LKLD+ KAYD ++ F+ KLGFP + +M C++S +SV +NG P
Sbjct: 573 KTGKKGYLGLKLDMSKAYDRVEWCFLENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQP 632
Query: 518 HGFITPMRGIRKGDPISSYIFIIYAEILSTNLGNLEAKKLVKGL*IYQKARPI 676
P RG+R+GDP+S ++F++ AE LST L + E KK++ G+ I + PI
Sbjct: 633 SRNFFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVIHGVKIGHRVSPI 685
Score = 26.9 bits (58), Expect(2) = 9e-36
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 13 FFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPK 132
F++ FW+T + V + +++ +N T+I LIPK
Sbjct: 464 FYQHFWDTIGEDVTTKVLNMLNNVDNIGAVNQTHIVLIPK 503
>gb|ABF95850.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 940
Score = 144 bits (364), Expect(2) = 1e-35
Identities = 74/173 (42%), Positives = 112/173 (64%), Gaps = 6/173 (3%)
Frame = +2
Query: 143 QKSSHFRPISLCHVTYKIISKILVNRIRPLCPFLISLYQCAFVPQKSIHDNIAIAGELFH 322
++ FRPISLC+V YK++SK +VNR+RP+ +IS+ Q AF+P++ I DN IA E H
Sbjct: 222 EQLKEFRPISLCNVIYKVVSKCMVNRLRPILKDIISVTQSAFIPERLITDNALIAFECIH 281
Query: 323 YIRTSTITKNPKIALKLDIEKAYDILD*EFIRKTFTKLGFPNIFVDYIMLCISSDTYSVN 502
+I+ T A KLD+ KAYD +D +F+R TK+GF + +V+++M C+++ YSV+
Sbjct: 282 HIQKETSAGKQFCAYKLDLAKAYDRVDWDFLRGALTKVGFCSTWVEWVMACVTTVKYSVS 341
Query: 503 INGTPHGFITPMRGIRKGDPISSYIFIIYAEILSTNL------GNLEAKKLVK 643
NG +P RG+R+GDP+S Y+F+ A+ LST L G LE K+ +
Sbjct: 342 FNGNLLEPFSPSRGLRQGDPLSPYLFLFVADGLSTILSQDVQAGRLEELKVCR 394
Score = 32.3 bits (72), Expect(2) = 1e-35
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 1 YTSKFFKVFWETTQIQLVDMVRSFFGSLNIHPLMNHTNITLIPKVDSPK 147
+ ++FF+ W + ++ VR+FF + +N T+I LIPKV P+
Sbjct: 174 FPARFFQRNWAVLKKEVTTAVRNFFLQGVMLAGVNDTSIVLIPKVSKPE 222