BLASTX nr result
ID: Papaver27_contig00035869
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00035869
(960 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub... 386 e-105
ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymer... 379 e-103
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer... 379 e-103
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub... 377 e-102
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub... 377 e-102
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas... 375 e-101
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro... 374 e-101
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer... 371 e-100
ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I sub... 370 e-100
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub... 370 e-100
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat... 369 1e-99
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer... 368 2e-99
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr... 368 2e-99
ref|XP_002297732.2| DNA-directed RNA polymerase family protein [... 360 4e-97
ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago trunca... 360 4e-97
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub... 360 5e-97
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub... 358 1e-96
gb|AAG10602.1|AC008030_2 Similar to DNA-directed RNA polymerase ... 357 4e-96
gb|AAG52049.1|AC022455_3 DNA-directed RNA polymerase subunit, pu... 357 4e-96
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana... 357 4e-96
>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
vinifera]
Length = 1142
Score = 386 bits (991), Expect = e-105
Identities = 193/248 (77%), Positives = 214/248 (86%), Gaps = 1/248 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKS-EKSSSLIDE 782
DLIINPHAFPSRMTI MLLES+AAKGGSL+GKFVDATPF+ S + +G++ +SSSL+DE
Sbjct: 896 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDSLRKANGEAGSESSSLVDE 955
Query: 781 LGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQI 602
LGS L S GF YHG+EV+YSGF G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ+
Sbjct: 956 LGSMLTSYGFNYHGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQV 1015
Query: 601 TRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTS 422
TRQP RFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGS+LTT+
Sbjct: 1016 TRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSILTTSI 1075
Query: 421 AQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTL 242
Q KR VRE G LPPGR PKKVTCHAC+TSKGMETV+MPY+FR+LAAELAAMNIKMTL
Sbjct: 1076 IQPQKRAVREIG-GLPPGRAPKKVTCHACQTSKGMETVSMPYIFRFLAAELAAMNIKMTL 1134
Query: 241 KLTNGAEA 218
+L+NGA A
Sbjct: 1135 QLSNGAGA 1142
>ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X2 [Glycine max]
Length = 1004
Score = 379 bits (974), Expect = e-103
Identities = 192/248 (77%), Positives = 209/248 (84%), Gaps = 1/248 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSEK-SSSLIDE 782
DLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF SS K G+S+ S S++D+
Sbjct: 756 DLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVKKDSGESDSMSGSIVDD 815
Query: 781 LGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQI 602
LG L KGF YHGLEV+YSG G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+
Sbjct: 816 LGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQV 875
Query: 601 TRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTS 422
TRQP RFGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+LTTT
Sbjct: 876 TRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLTTTF 935
Query: 421 AQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTL 242
Q KR VRE G LPPGR PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNIKMTL
Sbjct: 936 TQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTL 994
Query: 241 KLTNGAEA 218
KL++GA A
Sbjct: 995 KLSDGAGA 1002
>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Glycine max]
Length = 1175
Score = 379 bits (974), Expect = e-103
Identities = 192/248 (77%), Positives = 209/248 (84%), Gaps = 1/248 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSEK-SSSLIDE 782
DLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF SS K G+S+ S S++D+
Sbjct: 927 DLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVKKDSGESDSMSGSIVDD 986
Query: 781 LGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQI 602
LG L KGF YHGLEV+YSG G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+
Sbjct: 987 LGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQV 1046
Query: 601 TRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTS 422
TRQP RFGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+LTTT
Sbjct: 1047 TRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLTTTF 1106
Query: 421 AQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTL 242
Q KR VRE G LPPGR PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNIKMTL
Sbjct: 1107 TQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTL 1165
Query: 241 KLTNGAEA 218
KL++GA A
Sbjct: 1166 KLSDGAGA 1173
>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
[Glycine max]
Length = 1151
Score = 377 bits (967), Expect = e-102
Identities = 191/246 (77%), Positives = 207/246 (84%), Gaps = 1/246 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSE-KSSSLIDE 782
DLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF SS G+S+ KS SL+D+
Sbjct: 903 DLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVTKDSGESDSKSGSLVDD 962
Query: 781 LGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQI 602
LG L KGF YHGLEV+YSG G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+
Sbjct: 963 LGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQV 1022
Query: 601 TRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTS 422
TRQP RFGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L TT
Sbjct: 1023 TRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTF 1082
Query: 421 AQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTL 242
Q KR VRE G LPPGR PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNIKMTL
Sbjct: 1083 IQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTL 1141
Query: 241 KLTNGA 224
KL++GA
Sbjct: 1142 KLSDGA 1147
>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
[Glycine max]
Length = 1175
Score = 377 bits (967), Expect = e-102
Identities = 191/246 (77%), Positives = 207/246 (84%), Gaps = 1/246 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSE-KSSSLIDE 782
DLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF SS G+S+ KS SL+D+
Sbjct: 927 DLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSVTKDSGESDSKSGSLVDD 986
Query: 781 LGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQI 602
LG L KGF YHGLEV+YSG G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+
Sbjct: 987 LGLLLREKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQV 1046
Query: 601 TRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTS 422
TRQP RFGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L TT
Sbjct: 1047 TRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLATTF 1106
Query: 421 AQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTL 242
Q KR VRE G LPPGR PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNIKMTL
Sbjct: 1107 IQPQKRPVREIG-GLPPGRAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKMTL 1165
Query: 241 KLTNGA 224
KL++GA
Sbjct: 1166 KLSDGA 1171
>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
gi|561006696|gb|ESW05690.1| hypothetical protein
PHAVU_011G201300g [Phaseolus vulgaris]
Length = 1180
Score = 375 bits (963), Expect = e-101
Identities = 190/251 (75%), Positives = 208/251 (82%), Gaps = 5/251 (1%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVK-DGKSEKSSSLIDE 782
DLIINPHAFPSRMTI MLLES+AAKGGSL G+FVDATPF SSTK +G KS SL+D+
Sbjct: 927 DLIINPHAFPSRMTIAMLLESVAAKGGSLRGEFVDATPFRSSTKKDGEGSDSKSGSLVDD 986
Query: 781 LGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQI 602
LG L KGF YHGLEV+YSG G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+
Sbjct: 987 LGVLLKEKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQV 1046
Query: 601 TRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTS 422
TRQP RFGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+L+TT
Sbjct: 1047 TRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSMLSTTF 1106
Query: 421 AQTHKRIVREQG----EKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNI 254
Q KR VR+ G +LPPGR KKV+CHAC+TSKGMETVAMPYVFRYLAAELAAMNI
Sbjct: 1107 IQPQKRPVRQIGGLPPGRLPPGRAAKKVSCHACQTSKGMETVAMPYVFRYLAAELAAMNI 1166
Query: 253 KMTLKLTNGAE 221
KMTLKL +GAE
Sbjct: 1167 KMTLKLNDGAE 1177
>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
isoform 2 [Theobroma cacao]
Length = 1180
Score = 374 bits (960), Expect = e-101
Identities = 188/248 (75%), Positives = 210/248 (84%), Gaps = 1/248 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSE-KSSSLIDE 782
DLIINPHAFPSRMTI MLLES+AAKGGSL+GKFVDATPF+ S K GK+E +S SL+DE
Sbjct: 934 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFSDSVKEAKGKTEAESESLVDE 993
Query: 781 LGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQI 602
LGS L ++GF YHG+EV+YSG G E+ CEIFIGPVYYQRLRHMVSDK+QVR+TG VDQI
Sbjct: 994 LGSMLRARGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRATGQVDQI 1053
Query: 601 TRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTS 422
TRQP RFGEMERD+MLAHGAAYLLHDRLHTCSD+HIADVCSLCGS+LTT+
Sbjct: 1054 TRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTSI 1113
Query: 421 AQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTL 242
Q KR+VRE G LPP R PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNI MT+
Sbjct: 1114 VQPPKRVVREIG-GLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNITMTI 1172
Query: 241 KLTNGAEA 218
+L +GA A
Sbjct: 1173 QLNSGAGA 1180
>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Cicer arietinum]
gi|502078798|ref|XP_004486058.1| PREDICTED: probable
DNA-directed RNA polymerase I subunit RPA2-like isoform
X2 [Cicer arietinum]
Length = 1177
Score = 371 bits (952), Expect = e-100
Identities = 186/247 (75%), Positives = 206/247 (83%), Gaps = 1/247 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKS-EKSSSLIDE 782
DLIINPHAFPSRMTI MLLES+AAKGGSL+GKF DATPF SS K D +S KS+SL+DE
Sbjct: 931 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDATPFRSSVKKDDEESGSKSASLVDE 990
Query: 781 LGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQI 602
LG L KGF YHG EV+YSG G E+ CEIFIGPVYYQRLRHMVSDK+QVRSTGT+DQ+
Sbjct: 991 LGVMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTIDQV 1050
Query: 601 TRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTS 422
TRQP RFGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCS+CGS+LTTT
Sbjct: 1051 TRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSICGSMLTTTF 1110
Query: 421 AQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTL 242
Q KR VRE G LPP R P+KVTCHAC++SKGME VAMPY+FRYLAAELAAMNIKMTL
Sbjct: 1111 QQPRKRPVREIG-GLPPARAPRKVTCHACQSSKGMEKVAMPYIFRYLAAELAAMNIKMTL 1169
Query: 241 KLTNGAE 221
KLT+G +
Sbjct: 1170 KLTDGVD 1176
>ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 719
Score = 370 bits (951), Expect = e-100
Identities = 184/247 (74%), Positives = 209/247 (84%), Gaps = 2/247 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSEKSS--SLID 785
DLIINPHAFPSRMTI ML+ES+AAKGG LNG+FV+ATPF SS + E+++ +L+D
Sbjct: 473 DLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNGETLVD 532
Query: 784 ELGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ 605
ELGS L+ KGF YHGLEV+YSG G E+ CEIFIGPVYYQRLRHMVSDK+QVRSTGTVDQ
Sbjct: 533 ELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQ 592
Query: 604 ITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTT 425
+TRQP RFGEMERDSMLAHGA+YLLHDRLHTCSDHHIADVCSLCGS+LT++
Sbjct: 593 VTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVLTSS 652
Query: 424 SAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMT 245
Q KR VRE G LPPG+ PK+VTCHACKTSKGMETVAMPYVF+YLAAELAAMNIKMT
Sbjct: 653 FVQPPKRAVREIG-GLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMT 711
Query: 244 LKLTNGA 224
L+L++GA
Sbjct: 712 LQLSSGA 718
>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 1173
Score = 370 bits (951), Expect = e-100
Identities = 184/247 (74%), Positives = 209/247 (84%), Gaps = 2/247 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSEKSS--SLID 785
DLIINPHAFPSRMTI ML+ES+AAKGG LNG+FV+ATPF SS + E+++ +L+D
Sbjct: 927 DLIINPHAFPSRMTIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNGETLVD 986
Query: 784 ELGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ 605
ELGS L+ KGF YHGLEV+YSG G E+ CEIFIGPVYYQRLRHMVSDK+QVRSTGTVDQ
Sbjct: 987 ELGSTLIKKGFNYHGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQ 1046
Query: 604 ITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTT 425
+TRQP RFGEMERDSMLAHGA+YLLHDRLHTCSDHHIADVCSLCGS+LT++
Sbjct: 1047 VTRQPIKGRKKGGGIRFGEMERDSMLAHGASYLLHDRLHTCSDHHIADVCSLCGSVLTSS 1106
Query: 424 SAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMT 245
Q KR VRE G LPPG+ PK+VTCHACKTSKGMETVAMPYVF+YLAAELAAMNIKMT
Sbjct: 1107 FVQPPKRAVREIG-GLPPGKAPKRVTCHACKTSKGMETVAMPYVFKYLAAELAAMNIKMT 1165
Query: 244 LKLTNGA 224
L+L++GA
Sbjct: 1166 LQLSSGA 1172
>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
subunit, putative [Ricinus communis]
Length = 1159
Score = 369 bits (946), Expect = 1e-99
Identities = 187/247 (75%), Positives = 206/247 (83%), Gaps = 2/247 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSEKSSS--LID 785
DLIINPHAFPSRMTI MLLES+AAKGGSLNGKFVDATPF SS K +G KS S L+D
Sbjct: 912 DLIINPHAFPSRMTIAMLLESLAAKGGSLNGKFVDATPFTSSVKNVNGGEAKSESESLVD 971
Query: 784 ELGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ 605
+LG+ L S GF YHG+EV+YSG G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ
Sbjct: 972 DLGNMLRSHGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ 1031
Query: 604 ITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTT 425
ITRQP RFGEMERD+MLAHGAAYLLHDRLHTCSD+HIADVCSLCGS+LTT+
Sbjct: 1032 ITRQPIKGRKRGGGIRFGEMERDAMLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTS 1091
Query: 424 SAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMT 245
QT KR+VR+ G LPP PKKV CH+C+TSKGMETVAMPYVFRYLAAELAAMNIKM
Sbjct: 1092 FIQTQKRVVRDIG-GLPPVGAPKKVACHSCQTSKGMETVAMPYVFRYLAAELAAMNIKMN 1150
Query: 244 LKLTNGA 224
++L+ GA
Sbjct: 1151 VQLSGGA 1157
>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Citrus sinensis]
Length = 1175
Score = 368 bits (944), Expect = 2e-99
Identities = 185/249 (74%), Positives = 208/249 (83%), Gaps = 2/249 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKS--EKSSSLID 785
DLIINPHAFPSRMTI MLLES+AAKGGSL+GKF+DATPFA+S K +G + ++S SL+D
Sbjct: 928 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVD 987
Query: 784 ELGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ 605
ELG L + GF YHG+EV+YSG G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ
Sbjct: 988 ELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQ 1047
Query: 604 ITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTT 425
ITRQP RFGEMERDS+LAHGAAYLLHDRLHTCSD+H+ADVCSLCGS+LT T
Sbjct: 1048 ITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTAT 1107
Query: 424 SAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMT 245
KR +RE G LPP R PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNIK+T
Sbjct: 1108 FIHPQKRAIREIG-GLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKIT 1166
Query: 244 LKLTNGAEA 218
L+L +GA A
Sbjct: 1167 LQLGDGATA 1175
>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
gi|557530116|gb|ESR41366.1| hypothetical protein
CICLE_v10024768mg [Citrus clementina]
Length = 1082
Score = 368 bits (944), Expect = 2e-99
Identities = 185/249 (74%), Positives = 208/249 (83%), Gaps = 2/249 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKS--EKSSSLID 785
DLIINPHAFPSRMTI MLLES+AAKGGSL+GKF+DATPFA+S K +G + ++S SL+D
Sbjct: 835 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVD 894
Query: 784 ELGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ 605
ELG L + GF YHG+EV+YSG G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ
Sbjct: 895 ELGEMLRTCGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQ 954
Query: 604 ITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTT 425
ITRQP RFGEMERDS+LAHGAAYLLHDRLHTCSD+H+ADVCSLCGS+LT T
Sbjct: 955 ITRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHVADVCSLCGSVLTAT 1014
Query: 424 SAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMT 245
KR +RE G LPP R PKKVTCHAC+TSKGMETVAMPYVFRYLAAELAAMNIK+T
Sbjct: 1015 FIHPQKRAIREIG-GLPPARAPKKVTCHACQTSKGMETVAMPYVFRYLAAELAAMNIKIT 1073
Query: 244 LKLTNGAEA 218
L+L +GA A
Sbjct: 1074 LQLGDGATA 1082
>ref|XP_002297732.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550346693|gb|EEE82537.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1117
Score = 360 bits (925), Expect = 4e-97
Identities = 185/247 (74%), Positives = 203/247 (82%), Gaps = 2/247 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSEKSS--SLID 785
DLIINPHAFPSRMTI MLLES+AAKGGSLNG FVDATPFAS+ + + KS SL+D
Sbjct: 873 DLIINPHAFPSRMTIAMLLESLAAKGGSLNGNFVDATPFASTVRASNAGEAKSEPESLVD 932
Query: 784 ELGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ 605
ELG L SKGF +HG+EV+YSG G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTG VDQ
Sbjct: 933 ELGKMLKSKGFNHHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGPVDQ 992
Query: 604 ITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTT 425
ITRQP RFGEMERDSMLAHGAAYLLHDRLHTCSD+HIADVCS+CGS+L TT
Sbjct: 993 ITRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDYHIADVCSICGSIL-TT 1051
Query: 424 SAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMT 245
Q +RIVR+ G LPP + PKKV CHAC+TSKG+ETVAMPYVFRYLAAELAAMNIKMT
Sbjct: 1052 HYQPQRRIVRDIG-GLPPVKAPKKVVCHACQTSKGIETVAMPYVFRYLAAELAAMNIKMT 1110
Query: 244 LKLTNGA 224
L L +GA
Sbjct: 1111 LHLNDGA 1117
>ref|XP_003609884.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355510939|gb|AES92081.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 1341
Score = 360 bits (925), Expect = 4e-97
Identities = 182/245 (74%), Positives = 202/245 (82%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSEKSSSLIDEL 779
DLIINPHAFPSRMTI MLLES+AAKGGSL+GKF DATPF SS + KS+SL+DEL
Sbjct: 1095 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFKDATPFRSSVE----PGSKSASLVDEL 1150
Query: 778 GSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQIT 599
G L KGF YHG EV+YSG G E+ CEIFIGPVYYQRLRHMVSDK+QVRSTGTVDQIT
Sbjct: 1151 GDMLKEKGFNYHGCEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQIT 1210
Query: 598 RQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTSA 419
RQP RFGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCS+CGS+L+TT
Sbjct: 1211 RQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSICGSMLSTTFI 1270
Query: 418 QTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMTLK 239
+ KR VR+ +P R P+KVTCHAC+TSKGMETVAMPY+FRYLAAELAAMNIKMTLK
Sbjct: 1271 EPQKRPVRDI-PGIPVRRAPRKVTCHACQTSKGMETVAMPYIFRYLAAELAAMNIKMTLK 1329
Query: 238 LTNGA 224
L+NGA
Sbjct: 1330 LSNGA 1334
>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
vesca subsp. vesca]
Length = 1171
Score = 360 bits (924), Expect = 5e-97
Identities = 182/249 (73%), Positives = 204/249 (81%), Gaps = 2/249 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKV--KDGKSEKSSSLID 785
DLIINPHAFPSRMTI MLLES+AAKGGSL+GK+VDATPFA+S K ++ EKS +L+D
Sbjct: 925 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYVDATPFANSEKKVKEETNGEKSKTLVD 984
Query: 784 ELGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ 605
ELG L KGF Y+G EV+YSG G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTG VDQ
Sbjct: 985 ELGEMLKVKGFNYNGAEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGMVDQ 1044
Query: 604 ITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTT 425
+TRQP RFGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+LTT+
Sbjct: 1045 VTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTS 1104
Query: 424 SAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMT 245
S Q R+ G +PP R PKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIK+
Sbjct: 1105 SVQPPVRVCEIPG--MPPMRAPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKLN 1162
Query: 244 LKLTNGAEA 218
L+L+N + A
Sbjct: 1163 LQLSNASGA 1171
>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
vesca subsp. vesca]
Length = 1169
Score = 358 bits (920), Expect = 1e-96
Identities = 182/249 (73%), Positives = 202/249 (81%), Gaps = 2/249 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKV--KDGKSEKSSSLID 785
DLIINPHAFPSRMTI MLLES+AAKGGSL+GKFVDATPFA+S K ++ EKS +L+D
Sbjct: 923 DLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFVDATPFANSEKKVNEETNGEKSKTLVD 982
Query: 784 ELGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ 605
ELG L KGF Y+G EV+YSG G E+ CEIFIGPVYYQRLRHMVSDKFQVRSTG VDQ
Sbjct: 983 ELGEMLKVKGFNYYGAEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGMVDQ 1042
Query: 604 ITRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTT 425
+TRQP RFGEMERDS+LAHGAAYLLHDRLHTCSD+HIADVCSLCGS+LTT+
Sbjct: 1043 VTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLLHDRLHTCSDYHIADVCSLCGSILTTS 1102
Query: 424 SAQTHKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMT 245
S Q + G +PP R PKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIK+
Sbjct: 1103 SVQPQVPVREIPG--MPPMRAPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKLN 1160
Query: 244 LKLTNGAEA 218
L+L+N A
Sbjct: 1161 LQLSNATGA 1169
>gb|AAG10602.1|AC008030_2 Similar to DNA-directed RNA polymerase subunit [Arabidopsis thaliana]
Length = 1233
Score = 357 bits (916), Expect = 4e-96
Identities = 179/245 (73%), Positives = 207/245 (84%), Gaps = 2/245 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSE-KSSSLIDE 782
DLIINPHAFPSRMTI MLLESIAAKGGSL+GKFVDATPF + K +G+ E KSS L+D+
Sbjct: 984 DLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPFRDAVKKTNGEEESKSSLLVDD 1043
Query: 781 LGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQI 602
LGS L KGF ++G E +YSG+LG+E+ CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+
Sbjct: 1044 LGSMLKEKGFNHYGTETLYSGYLGVELKCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQL 1103
Query: 601 TRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTS 422
T QP RFGEMERDS+LAHGA+YLLHDRLHT SDHHIADVCSLCGSLLT++
Sbjct: 1104 THQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSV 1163
Query: 421 AQT-HKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMT 245
K++++E G KLPPGR PKKVTC++CKTSKGMETVAMPYVFRYLAAELA+MNIKMT
Sbjct: 1164 VNVQQKKLIQEIG-KLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMT 1222
Query: 244 LKLTN 230
L+L++
Sbjct: 1223 LQLSD 1227
>gb|AAG52049.1|AC022455_3 DNA-directed RNA polymerase subunit, putative; 8546-1198 [Arabidopsis
thaliana]
Length = 1114
Score = 357 bits (916), Expect = 4e-96
Identities = 179/245 (73%), Positives = 207/245 (84%), Gaps = 2/245 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSE-KSSSLIDE 782
DLIINPHAFPSRMTI MLLESIAAKGGSL+GKFVDATPF + K +G+ E KSS L+D+
Sbjct: 865 DLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPFRDAVKKTNGEEESKSSLLVDD 924
Query: 781 LGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQI 602
LGS L KGF ++G E +YSG+LG+E+ CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+
Sbjct: 925 LGSMLKEKGFNHYGTETLYSGYLGVELKCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQL 984
Query: 601 TRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTS 422
T QP RFGEMERDS+LAHGA+YLLHDRLHT SDHHIADVCSLCGSLLT++
Sbjct: 985 THQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSV 1044
Query: 421 AQT-HKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMT 245
K++++E G KLPPGR PKKVTC++CKTSKGMETVAMPYVFRYLAAELA+MNIKMT
Sbjct: 1045 VNVQQKKLIQEIG-KLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMT 1103
Query: 244 LKLTN 230
L+L++
Sbjct: 1104 LQLSD 1108
>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
[Arabidopsis thaliana]
Length = 1178
Score = 357 bits (916), Expect = 4e-96
Identities = 179/245 (73%), Positives = 207/245 (84%), Gaps = 2/245 (0%)
Frame = -3
Query: 958 DLIINPHAFPSRMTIGMLLESIAAKGGSLNGKFVDATPFASSTKVKDGKSE-KSSSLIDE 782
DLIINPHAFPSRMTI MLLESIAAKGGSL+GKFVDATPF + K +G+ E KSS L+D+
Sbjct: 929 DLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFVDATPFRDAVKKTNGEEESKSSLLVDD 988
Query: 781 LGSQLVSKGFQYHGLEVMYSGFLGIEMACEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQI 602
LGS L KGF ++G E +YSG+LG+E+ CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+
Sbjct: 989 LGSMLKEKGFNHYGTETLYSGYLGVELKCEIFMGPVYYQRLRHMVSDKFQVRSTGQVDQL 1048
Query: 601 TRQPXXXXXXXXXXRFGEMERDSMLAHGAAYLLHDRLHTCSDHHIADVCSLCGSLLTTTS 422
T QP RFGEMERDS+LAHGA+YLLHDRLHT SDHHIADVCSLCGSLLT++
Sbjct: 1049 THQPIKGRKRGGGIRFGEMERDSLLAHGASYLLHDRLHTSSDHHIADVCSLCGSLLTSSV 1108
Query: 421 AQT-HKRIVREQGEKLPPGRIPKKVTCHACKTSKGMETVAMPYVFRYLAAELAAMNIKMT 245
K++++E G KLPPGR PKKVTC++CKTSKGMETVAMPYVFRYLAAELA+MNIKMT
Sbjct: 1109 VNVQQKKLIQEIG-KLPPGRTPKKVTCYSCKTSKGMETVAMPYVFRYLAAELASMNIKMT 1167
Query: 244 LKLTN 230
L+L++
Sbjct: 1168 LQLSD 1172