BLASTX nr result
ID: Papaver27_contig00035841
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00035841
(466 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006440279.1| hypothetical protein CICLE_v10018920mg [Citr... 78 2e-22
ref|XP_007157274.1| hypothetical protein PHAVU_002G0571001g, par... 75 3e-22
ref|XP_003538746.1| PREDICTED: DNA mismatch repair protein MSH4-... 75 6e-22
ref|XP_006590572.1| PREDICTED: DNA mismatch repair protein MSH4-... 75 6e-22
ref|XP_006590573.1| PREDICTED: DNA mismatch repair protein MSH4-... 75 6e-22
ref|XP_006590574.1| PREDICTED: DNA mismatch repair protein MSH4-... 75 6e-22
ref|XP_006477159.1| PREDICTED: DNA mismatch repair protein MSH4-... 78 1e-21
ref|XP_004511707.1| PREDICTED: DNA mismatch repair protein MSH4-... 72 8e-21
ref|XP_004511708.1| PREDICTED: DNA mismatch repair protein MSH4-... 72 8e-21
ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-... 77 8e-21
ref|XP_004511709.1| PREDICTED: DNA mismatch repair protein MSH4-... 72 8e-21
ref|XP_006414236.1| hypothetical protein EUTSA_v10024454mg [Eutr... 76 1e-20
ref|XP_003611337.1| DNA mismatch repair protein mutS [Medicago t... 72 1e-20
ref|XP_007210902.1| hypothetical protein PRUPE_ppa001614mg [Prun... 76 1e-20
ref|XP_006282563.1| hypothetical protein CARUB_v10004171mg [Caps... 75 2e-20
ref|XP_006369003.1| hypothetical protein POPTR_0001s15610g [Popu... 74 2e-20
ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis t... 74 4e-20
gb|AAT70180.1| MSH4 [Arabidopsis thaliana] 74 4e-20
ref|XP_002870107.1| hypothetical protein ARALYDRAFT_493139 [Arab... 74 7e-20
emb|CAB10519.1| hypothetical protein [Arabidopsis thaliana] gi|7... 74 7e-20
>ref|XP_006440279.1| hypothetical protein CICLE_v10018920mg [Citrus clementina]
gi|557542541|gb|ESR53519.1| hypothetical protein
CICLE_v10018920mg [Citrus clementina]
Length = 792
Score = 77.8 bits (190), Expect(2) = 2e-22
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
DVSVLTLLAEV CLLDM+VNSFAHTISTKPVDRYTRP FT
Sbjct: 474 DVSVLTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPHFT 513
Score = 53.9 bits (128), Expect(2) = 2e-22
Identities = 36/90 (40%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = -2
Query: 270 RSCLVENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSK 91
R ENGPLAID GRHPILESIHNDFI + I + AA I
Sbjct: 509 RPHFTENGPLAIDGGRHPILESIHNDFIPNN--------------IFISEAANMVIVTGP 554
Query: 90 RKSGHCYFL--TLFIIVLNSVLVYSPTIFS 7
SG +L I++L + Y P FS
Sbjct: 555 NMSGKSTYLQQVCLIVILAQIGCYVPAHFS 584
>ref|XP_007157274.1| hypothetical protein PHAVU_002G0571001g, partial [Phaseolus
vulgaris] gi|561030689|gb|ESW29268.1| hypothetical
protein PHAVU_002G0571001g, partial [Phaseolus vulgaris]
Length = 415
Score = 75.5 bits (184), Expect(2) = 3e-22
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
+VSVLTLLAEV CLLDM+VNSFAH ISTKPVDRYTRPEFT
Sbjct: 140 NVSVLTLLAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFT 179
Score = 55.5 bits (132), Expect(2) = 3e-22
Identities = 36/87 (41%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = -2
Query: 255 ENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSKRKSGH 76
ENGPLAIDSGRHPILESIHNDF+ + I + A+ I SG
Sbjct: 180 ENGPLAIDSGRHPILESIHNDFVANN--------------IFLSEASNMVIVMGPNMSGK 225
Query: 75 CYFL--TLFIIVLNSVLVYSPTIFSFL 1
+L I++L V Y P FS L
Sbjct: 226 STYLQQVCLIVILAQVGCYVPARFSTL 252
>ref|XP_003538746.1| PREDICTED: DNA mismatch repair protein MSH4-like isoform X1
[Glycine max]
Length = 794
Score = 75.5 bits (184), Expect(2) = 6e-22
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
+VSVLTLLAEV CLLDM+VNSFAH ISTKPVDRYTRPEFT
Sbjct: 474 NVSVLTLLAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFT 513
Score = 54.3 bits (129), Expect(2) = 6e-22
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = -2
Query: 255 ENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSKRKSGH 76
ENGPLAIDSGRHPILESIHNDF+ + I + A+ I SG
Sbjct: 514 ENGPLAIDSGRHPILESIHNDFVANN--------------IFLTEASNMAIVMGPNMSGK 559
Query: 75 CYFL--TLFIIVLNSVLVYSPTIFS 7
+L I++L V Y P FS
Sbjct: 560 STYLQQVCLIVILAQVGCYVPARFS 584
>ref|XP_006590572.1| PREDICTED: DNA mismatch repair protein MSH4-like isoform X2
[Glycine max]
Length = 758
Score = 75.5 bits (184), Expect(2) = 6e-22
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
+VSVLTLLAEV CLLDM+VNSFAH ISTKPVDRYTRPEFT
Sbjct: 438 NVSVLTLLAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFT 477
Score = 54.3 bits (129), Expect(2) = 6e-22
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = -2
Query: 255 ENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSKRKSGH 76
ENGPLAIDSGRHPILESIHNDF+ + I + A+ I SG
Sbjct: 478 ENGPLAIDSGRHPILESIHNDFVANN--------------IFLTEASNMAIVMGPNMSGK 523
Query: 75 CYFL--TLFIIVLNSVLVYSPTIFS 7
+L I++L V Y P FS
Sbjct: 524 STYLQQVCLIVILAQVGCYVPARFS 548
>ref|XP_006590573.1| PREDICTED: DNA mismatch repair protein MSH4-like isoform X3
[Glycine max]
Length = 753
Score = 75.5 bits (184), Expect(2) = 6e-22
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
+VSVLTLLAEV CLLDM+VNSFAH ISTKPVDRYTRPEFT
Sbjct: 474 NVSVLTLLAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFT 513
Score = 54.3 bits (129), Expect(2) = 6e-22
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = -2
Query: 255 ENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSKRKSGH 76
ENGPLAIDSGRHPILESIHNDF+ + I + A+ I SG
Sbjct: 514 ENGPLAIDSGRHPILESIHNDFVANN--------------IFLTEASNMAIVMGPNMSGK 559
Query: 75 CYFL--TLFIIVLNSVLVYSPTIFS 7
+L I++L V Y P FS
Sbjct: 560 STYLQQVCLIVILAQVGCYVPARFS 584
>ref|XP_006590574.1| PREDICTED: DNA mismatch repair protein MSH4-like isoform X4
[Glycine max]
Length = 682
Score = 75.5 bits (184), Expect(2) = 6e-22
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
+VSVLTLLAEV CLLDM+VNSFAH ISTKPVDRYTRPEFT
Sbjct: 474 NVSVLTLLAEVLCLLDMIVNSFAHMISTKPVDRYTRPEFT 513
Score = 54.3 bits (129), Expect(2) = 6e-22
Identities = 35/85 (41%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = -2
Query: 255 ENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSKRKSGH 76
ENGPLAIDSGRHPILESIHNDF+ + I + A+ I SG
Sbjct: 514 ENGPLAIDSGRHPILESIHNDFVANN--------------IFLTEASNMAIVMGPNMSGK 559
Query: 75 CYFL--TLFIIVLNSVLVYSPTIFS 7
+L I++L V Y P FS
Sbjct: 560 STYLQQVCLIVILAQVGCYVPARFS 584
>ref|XP_006477159.1| PREDICTED: DNA mismatch repair protein MSH4-like [Citrus sinensis]
Length = 792
Score = 77.8 bits (190), Expect(2) = 1e-21
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
DVSVLTLLAEV CLLDM+VNSFAHTISTKPVDRYTRP FT
Sbjct: 474 DVSVLTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPHFT 513
Score = 51.2 bits (121), Expect(2) = 1e-21
Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Frame = -2
Query: 270 RSCLVENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSK 91
R ENGPLAID GRHPILESIHN FI + I + AA I
Sbjct: 509 RPHFTENGPLAIDGGRHPILESIHNGFIPNN--------------IFISEAANMVIVTGP 554
Query: 90 RKSGHCYFL--TLFIIVLNSVLVYSPTIFS 7
SG +L I++L + Y P FS
Sbjct: 555 NMSGKSTYLQQVCLIVILAQIGCYVPAHFS 584
>ref|XP_004511707.1| PREDICTED: DNA mismatch repair protein MSH4-like isoform X1 [Cicer
arietinum]
Length = 792
Score = 72.0 bits (175), Expect(2) = 8e-21
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
+VS LTLLAE+ CLLDM+VNSFAH ISTKPVD+YTRPEFT
Sbjct: 474 NVSALTLLAEILCLLDMIVNSFAHMISTKPVDQYTRPEFT 513
Score = 53.9 bits (128), Expect(2) = 8e-21
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = -2
Query: 255 ENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSKRKSGH 76
ENGP+AIDSGRHPILESIHNDF+ + F + A+ I SG
Sbjct: 514 ENGPMAIDSGRHPILESIHNDFVANNLF--------------LSEASNMVIVTGPNMSGK 559
Query: 75 CYFL--TLFIIVLNSVLVYSPTIFSFL 1
+L I++L V Y P FS L
Sbjct: 560 STYLQQVCLIVILAQVGCYVPVRFSTL 586
>ref|XP_004511708.1| PREDICTED: DNA mismatch repair protein MSH4-like isoform X2 [Cicer
arietinum]
Length = 784
Score = 72.0 bits (175), Expect(2) = 8e-21
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
+VS LTLLAE+ CLLDM+VNSFAH ISTKPVD+YTRPEFT
Sbjct: 466 NVSALTLLAEILCLLDMIVNSFAHMISTKPVDQYTRPEFT 505
Score = 53.9 bits (128), Expect(2) = 8e-21
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = -2
Query: 255 ENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSKRKSGH 76
ENGP+AIDSGRHPILESIHNDF+ + F + A+ I SG
Sbjct: 506 ENGPMAIDSGRHPILESIHNDFVANNLF--------------LSEASNMVIVTGPNMSGK 551
Query: 75 CYFL--TLFIIVLNSVLVYSPTIFSFL 1
+L I++L V Y P FS L
Sbjct: 552 STYLQQVCLIVILAQVGCYVPVRFSTL 578
>ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-like, partial [Cucumis
sativus]
Length = 770
Score = 76.6 bits (187), Expect(2) = 8e-21
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
DVS+LTLLAEV CLLDM+VNSFAHTISTKPVDRYTRP FT
Sbjct: 452 DVSMLTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPNFT 491
Score = 49.3 bits (116), Expect(2) = 8e-21
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = -2
Query: 270 RSCLVENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSK 91
R ENGP+AI++ RHPILESIHNDF+ S I + A+ I
Sbjct: 487 RPNFTENGPMAIEAARHPILESIHNDFVANS--------------IFLSEASNMIIVMGP 532
Query: 90 RKSGHCYFL--TLFIIVLNSVLVYSPTIFSFL 1
SG +L +++L + Y P FS L
Sbjct: 533 NMSGKSTYLQQMCLLVILAQIGCYVPAHFSTL 564
>ref|XP_004511709.1| PREDICTED: DNA mismatch repair protein MSH4-like isoform X3 [Cicer
arietinum]
Length = 648
Score = 72.0 bits (175), Expect(2) = 8e-21
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
+VS LTLLAE+ CLLDM+VNSFAH ISTKPVD+YTRPEFT
Sbjct: 474 NVSALTLLAEILCLLDMIVNSFAHMISTKPVDQYTRPEFT 513
Score = 53.9 bits (128), Expect(2) = 8e-21
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = -2
Query: 255 ENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSKRKSGH 76
ENGP+AIDSGRHPILESIHNDF+ + F + A+ I SG
Sbjct: 514 ENGPMAIDSGRHPILESIHNDFVANNLF--------------LSEASNMVIVTGPNMSGK 559
Query: 75 CYFL--TLFIIVLNSVLVYSPTIFSFL 1
+L I++L V Y P FS L
Sbjct: 560 STYLQQVCLIVILAQVGCYVPVRFSTL 586
>ref|XP_006414236.1| hypothetical protein EUTSA_v10024454mg [Eutrema salsugineum]
gi|557115406|gb|ESQ55689.1| hypothetical protein
EUTSA_v10024454mg [Eutrema salsugineum]
Length = 792
Score = 75.9 bits (185), Expect(2) = 1e-20
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
DVS LTLLAEV CLLDM+VNSFAHTISTKPVDRYTRPE T
Sbjct: 474 DVSALTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPELT 513
Score = 49.7 bits (117), Expect(2) = 1e-20
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -2
Query: 261 LVENGPLAIDSGRHPILESIHNDFIVCSNF 172
L ++GPLAID+GRHPILESIHNDF+ S F
Sbjct: 512 LTDSGPLAIDAGRHPILESIHNDFVPNSIF 541
>ref|XP_003611337.1| DNA mismatch repair protein mutS [Medicago truncatula]
gi|355512672|gb|AES94295.1| DNA mismatch repair protein
mutS [Medicago truncatula]
Length = 800
Score = 72.0 bits (175), Expect(2) = 1e-20
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
+VS LTLLAE+ CLLDM+VNSFAH ISTKPVD+YTRPEFT
Sbjct: 489 NVSALTLLAEILCLLDMIVNSFAHMISTKPVDQYTRPEFT 528
Score = 53.1 bits (126), Expect(2) = 1e-20
Identities = 34/87 (39%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = -2
Query: 255 ENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSKRKSGH 76
ENGP+AIDSGRHPILESIHNDF+ + I + A+ I SG
Sbjct: 529 ENGPMAIDSGRHPILESIHNDFVANN--------------IFLSEASNMAIVTGPNMSGK 574
Query: 75 CYFL--TLFIIVLNSVLVYSPTIFSFL 1
+L I+++ V Y P FS L
Sbjct: 575 STYLQQVCLIVIIAQVGCYVPARFSTL 601
>ref|XP_007210902.1| hypothetical protein PRUPE_ppa001614mg [Prunus persica]
gi|462406637|gb|EMJ12101.1| hypothetical protein
PRUPE_ppa001614mg [Prunus persica]
Length = 792
Score = 76.3 bits (186), Expect(2) = 1e-20
Identities = 36/40 (90%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
DVS LTLLAEV CLLDM+VNSFAH ISTKPVDRYTRPEFT
Sbjct: 474 DVSALTLLAEVLCLLDMIVNSFAHAISTKPVDRYTRPEFT 513
Score = 48.9 bits (115), Expect(2) = 1e-20
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = -2
Query: 255 ENGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSKRKSGH 76
+NGP+AID+GRHPILE+IHNDF+ + I + A+ + SG
Sbjct: 514 DNGPMAIDAGRHPILETIHNDFVPNN--------------IFLSEASNMVLIIGPNMSGK 559
Query: 75 CYFL--TLFIIVLNSVLVYSPTIFSFL 1
+L I++L + Y P FS L
Sbjct: 560 STYLQQVCLIVILAQIGCYVPARFSTL 586
>ref|XP_006282563.1| hypothetical protein CARUB_v10004171mg [Capsella rubella]
gi|482551268|gb|EOA15461.1| hypothetical protein
CARUB_v10004171mg [Capsella rubella]
Length = 792
Score = 74.7 bits (182), Expect(2) = 2e-20
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
D+S LTLLAEV CLLDMLVNSFAHTISTKPVDRY+RPE T
Sbjct: 474 DISALTLLAEVLCLLDMLVNSFAHTISTKPVDRYSRPELT 513
Score = 49.7 bits (117), Expect(2) = 2e-20
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -2
Query: 261 LVENGPLAIDSGRHPILESIHNDFIVCSNF 172
L ++GPLAID+GRHPILESIHNDF+ S F
Sbjct: 512 LTDSGPLAIDAGRHPILESIHNDFVSNSIF 541
>ref|XP_006369003.1| hypothetical protein POPTR_0001s15610g [Populus trichocarpa]
gi|550347362|gb|ERP65572.1| hypothetical protein
POPTR_0001s15610g [Populus trichocarpa]
Length = 474
Score = 73.9 bits (180), Expect(2) = 2e-20
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
D S LTLLAEV CLLDM++NSFA+TISTKPVDRYTRPEFT
Sbjct: 310 DASALTLLAEVLCLLDMIINSFAYTISTKPVDRYTRPEFT 349
Score = 50.4 bits (119), Expect(2) = 2e-20
Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = -2
Query: 252 NGPLAIDSGRHPILESIHNDFIVCSNFGLIYVVRS*FMLIVVQYAAVFTITFSKRKSGHC 73
NGPLAID+GRHPILESIHNDF+ + I + A+ I SG
Sbjct: 351 NGPLAIDAGRHPILESIHNDFVPNN--------------IFLSEASNMVIVMGPNMSGKS 396
Query: 72 YFL--TLFIIVLNSVLVYSPTIFS 7
+L I++L + Y P FS
Sbjct: 397 TYLQQVCLIVILAQIGCYVPARFS 420
>ref|NP_193469.2| DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
gi|395406788|sp|F4JP48.1|MSH4_ARATH RecName: Full=DNA
mismatch repair protein MSH4; Short=AtMSH4; AltName:
Full=MutS protein homolog 4 gi|332658482|gb|AEE83882.1|
DNA mismatch repair protein MSH4 [Arabidopsis thaliana]
Length = 792
Score = 73.9 bits (180), Expect(2) = 4e-20
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
D+S LTLLAEV CLLDM+VNSFAHTISTKPVDRY+RPE T
Sbjct: 474 DISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELT 513
Score = 49.7 bits (117), Expect(2) = 4e-20
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -2
Query: 261 LVENGPLAIDSGRHPILESIHNDFIVCSNF 172
L ++GPLAID+GRHPILESIHNDF+ S F
Sbjct: 512 LTDSGPLAIDAGRHPILESIHNDFVSNSIF 541
>gb|AAT70180.1| MSH4 [Arabidopsis thaliana]
Length = 792
Score = 73.9 bits (180), Expect(2) = 4e-20
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
D+S LTLLAEV CLLDM+VNSFAHTISTKPVDRY+RPE T
Sbjct: 474 DISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELT 513
Score = 49.7 bits (117), Expect(2) = 4e-20
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -2
Query: 261 LVENGPLAIDSGRHPILESIHNDFIVCSNF 172
L ++GPLAID+GRHPILESIHNDF+ S F
Sbjct: 512 LTDSGPLAIDAGRHPILESIHNDFVSNSIF 541
>ref|XP_002870107.1| hypothetical protein ARALYDRAFT_493139 [Arabidopsis lyrata subsp.
lyrata] gi|297315943|gb|EFH46366.1| hypothetical protein
ARALYDRAFT_493139 [Arabidopsis lyrata subsp. lyrata]
Length = 792
Score = 73.9 bits (180), Expect(2) = 7e-20
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
D+S LTLLAEV CLLDM+VNSFAHTISTKPVDRY+RPE T
Sbjct: 474 DISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELT 513
Score = 48.9 bits (115), Expect(2) = 7e-20
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = -2
Query: 261 LVENGPLAIDSGRHPILESIHNDFIVCSNF 172
L ++GPLAID+GRHP+LESIHNDF+ S F
Sbjct: 512 LTDSGPLAIDAGRHPLLESIHNDFVSNSIF 541
>emb|CAB10519.1| hypothetical protein [Arabidopsis thaliana]
gi|7268490|emb|CAB78741.1| hypothetical protein
[Arabidopsis thaliana]
Length = 520
Score = 73.9 bits (180), Expect(2) = 7e-20
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -1
Query: 466 DVSVLTLLAEVFCLLDMLVNSFAHTISTKPVDRYTRPEFT 347
D+S LTLLAEV CLLDM+VNSFAHTISTKPVDRY+RPE T
Sbjct: 305 DISALTLLAEVLCLLDMIVNSFAHTISTKPVDRYSRPELT 344
Score = 48.9 bits (115), Expect(2) = 7e-20
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = -2
Query: 261 LVENGPLAIDSGRHPILESIHNDFI 187
L ++GPLAID+GRHPILESIHNDF+
Sbjct: 343 LTDSGPLAIDAGRHPILESIHNDFV 367