BLASTX nr result
ID: Papaver27_contig00034947
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00034947
(913 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 263 5e-68
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 263 5e-68
emb|CBI26820.3| unnamed protein product [Vitis vinifera] 255 1e-65
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 255 1e-65
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera] 255 1e-65
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus... 254 4e-65
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 253 1e-64
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 252 1e-64
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun... 252 1e-64
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 249 1e-63
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 245 2e-62
ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [A... 244 3e-62
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 244 4e-62
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 244 4e-62
ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Caps... 239 8e-61
ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutr... 239 1e-60
gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum de... 238 2e-60
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera] 237 4e-60
gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tu... 237 4e-60
gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum de... 237 4e-60
>ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 292
Score = 263 bits (673), Expect = 5e-68
Identities = 127/192 (66%), Positives = 151/192 (78%)
Frame = +3
Query: 3 KRVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKL 182
+ V+GKLFR VKDIAPHT+ I+ FT EVAR+SYD DMEVDGFED++DDA +HKG +DYKL
Sbjct: 102 QNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKL 161
Query: 183 ANLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSG 362
NLMDYYGIKTEAEIL GS+MK+SKSF RRDAE+I +AVRAL+KEAR WF +K SG
Sbjct: 162 GNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEK----SG 217
Query: 363 SQEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRKH 542
S +DD YAKASAWYHVTYHP Y+G Y +R+HFLSFPWCVYD+L+ IKK+ +
Sbjct: 218 SDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNA 277
Query: 543 NWSLEDQFTSSL 578
+LE QF L
Sbjct: 278 FPALEQQFRQGL 289
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 263 bits (673), Expect = 5e-68
Identities = 127/192 (66%), Positives = 151/192 (78%)
Frame = +3
Query: 3 KRVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKL 182
+ V+GKLFR VKDIAPHT+ I+ FT EVAR+SYD DMEVDGFED++DDA +HKG +DYKL
Sbjct: 942 QNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHKGNYDYKL 1001
Query: 183 ANLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSG 362
NLMDYYGIKTEAEIL GS+MK+SKSF RRDAE+I +AVRAL+KEAR WF +K SG
Sbjct: 1002 GNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKEK----SG 1057
Query: 363 SQEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRKH 542
S +DD YAKASAWYHVTYHP Y+G Y +R+HFLSFPWCVYD+L+ IKK+ +
Sbjct: 1058 SDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWCVYDRLVEIKKDKTSIGNA 1117
Query: 543 NWSLEDQFTSSL 578
+LE QF L
Sbjct: 1118 FPALEQQFRQGL 1129
>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 255 bits (652), Expect = 1e-65
Identities = 124/193 (64%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Frame = +3
Query: 9 VMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKLAN 188
V+GKLFR+VKDIAPH +I+SFT +VAR+SYD DMEV GFEDY+ DA+++K E+DYKL N
Sbjct: 728 VIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGN 787
Query: 189 LMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSGSQ 368
LMDYYGIKTE+EIL GS+M++SKSF+ R+DAE+I LAV++L+KEARTWF+K +
Sbjct: 788 LMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMG--SETDS 845
Query: 369 EDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIK-KNNSMRRKHN 545
E DD+YAKASAWYHVTYHP Y+G Y + R+HFLSFPWCVYDKLIH K K S R H
Sbjct: 846 EADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSGRSLHL 905
Query: 546 WSLEDQFTSSLIL 584
SLE + + L L
Sbjct: 906 SSLERRLSQGLRL 918
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 255 bits (652), Expect = 1e-65
Identities = 124/193 (64%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Frame = +3
Query: 9 VMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKLAN 188
V+GKLFR+VKDIAPH +I+SFT +VAR+SYD DMEV GFEDY+ DA+++K E+DYKL N
Sbjct: 930 VIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGN 989
Query: 189 LMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSGSQ 368
LMDYYGIKTE+EIL GS+M++SKSF+ R+DAE+I LAV++L+KEARTWF+K +
Sbjct: 990 LMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMG--SETDS 1047
Query: 369 EDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIK-KNNSMRRKHN 545
E DD+YAKASAWYHVTYHP Y+G Y + R+HFLSFPWCVYDKLIH K K S R H
Sbjct: 1048 EADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSGRSLHL 1107
Query: 546 WSLEDQFTSSLIL 584
SLE + + L L
Sbjct: 1108 SSLERRLSQGLRL 1120
>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
Length = 654
Score = 255 bits (652), Expect = 1e-65
Identities = 124/193 (64%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Frame = +3
Query: 9 VMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKLAN 188
V+GKLFR+VKDIAPH +I+SFT +VAR+SYD DMEV GFEDY+ DA+++K E+DYKL N
Sbjct: 463 VIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGN 522
Query: 189 LMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSGSQ 368
LMDYYGIKTE+EIL GS+M++SKSF+ R+DAE+I LAV++L+KEARTWF+K +
Sbjct: 523 LMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMG--SETDS 580
Query: 369 EDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIK-KNNSMRRKHN 545
E DD+YAKASAWYHVTYHP Y+G Y + R+HFLSFPWCVYDKLIH K K S R H
Sbjct: 581 EADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKMSGRSLHL 640
Query: 546 WSLEDQFTSSLIL 584
SLE + + L L
Sbjct: 641 SSLERRLSQGLRL 653
>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
Length = 1110
Score = 254 bits (648), Expect = 4e-65
Identities = 118/187 (63%), Positives = 147/187 (78%)
Frame = +3
Query: 6 RVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKLA 185
RV+GKLFR+VKDIAP T+ +SFT EVAR+SYD DMEVDGFED++D+A+ HK E+DYKL
Sbjct: 925 RVIGKLFREVKDIAPQTSSFRSFTKEVARRSYDPDMEVDGFEDHIDEAFLHKTEYDYKLG 984
Query: 186 NLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSGS 365
NLM+YYG+KTEAE+L G +MK+SK+F+ R+DAE+I AVR+L+ EAR+WF K
Sbjct: 985 NLMEYYGVKTEAEVLSGGIMKMSKTFDRRKDAEAIGAAVRSLRNEARSWFKK-------G 1037
Query: 366 QEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRKHN 545
E DD+YAKASAWY+VTYHP YFG Y + R+H+LSFPWCVYDKL+ IKK+NS R
Sbjct: 1038 TEADDVYAKASAWYYVTYHPDYFGCYNEGMKRDHYLSFPWCVYDKLVKIKKDNSRRASQM 1097
Query: 546 WSLEDQF 566
SL QF
Sbjct: 1098 ASLRRQF 1104
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 253 bits (645), Expect = 1e-64
Identities = 122/198 (61%), Positives = 157/198 (79%), Gaps = 3/198 (1%)
Frame = +3
Query: 3 KRVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKL 182
+ V+GKLFR+VKDIAP T+ I+SFT +VAR+ YD DMEVDGFEDY+DDA+++K +DYKL
Sbjct: 938 RNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKL 997
Query: 183 ANLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSG 362
NLM+YYGIKTEAE+L GS MK+SKSF +RDAE+I +AVR+LKKEAR+WF++K +
Sbjct: 998 GNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKG--SGL 1055
Query: 363 SQEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRKH 542
+ DD+ AKASAWYHVTYH +Y+G Y + +R+HFLSFPWCVYDKLI IK+ NS R +
Sbjct: 1056 DSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNSARIRR 1115
Query: 543 NW---SLEDQFTSSLILS 587
+ S+E QF+ L LS
Sbjct: 1116 SLILPSVERQFSRGLHLS 1133
>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
vesca]
Length = 1119
Score = 252 bits (644), Expect = 1e-64
Identities = 121/194 (62%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Frame = +3
Query: 9 VMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKLAN 188
V+G+LFR+VKDIAPH + I SFT +VA K YD DMEVDGFEDYL+DA++HKG +DYKL N
Sbjct: 929 VIGQLFREVKDIAPHDSSIASFTRQVATKCYDPDMEVDGFEDYLEDAFYHKGNYDYKLGN 988
Query: 189 LMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSI-FNSGS 365
++DYYGIKTEAEIL GS+M LSKSF RRDA++I++AV++L+KEAR WF++K +SG
Sbjct: 989 MLDYYGIKTEAEILSGSIMTLSKSFTKRRDADAINVAVKSLRKEARAWFNEKDTGIDSG- 1047
Query: 366 QEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRKHN 545
DDD+YAKASAWYHVTYHP+YFG Y + +R HF+SFPWCV+DKL HIKK + +
Sbjct: 1048 --DDDVYAKASAWYHVTYHPNYFGLYNEGMNRAHFISFPWCVFDKLGHIKKEKVNQARLI 1105
Query: 546 WSLEDQFTSSLILS 587
SLE++ L S
Sbjct: 1106 SSLENRLRYGLRFS 1119
>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
gi|462422197|gb|EMJ26460.1| hypothetical protein
PRUPE_ppa001524mg [Prunus persica]
Length = 808
Score = 252 bits (644), Expect = 1e-64
Identities = 123/196 (62%), Positives = 158/196 (80%), Gaps = 3/196 (1%)
Frame = +3
Query: 9 VMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKLAN 188
V+G+LFR+VKD+ PH I+SF+ EVAR+SYD DMEVDGFEDY++DA+++K +D L N
Sbjct: 616 VIGELFREVKDVEPHDGSIRSFSREVARQSYDRDMEVDGFEDYIEDAFYYKSNYDSILGN 675
Query: 189 LMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSI-FNSGS 365
L+DYYGIKTEAEIL GSVMK+SKSF RRD + I++AVR+L+KEARTWF++K+ +SG+
Sbjct: 676 LLDYYGIKTEAEILSGSVMKMSKSFTKRRDIDPINMAVRSLRKEARTWFNEKATGLDSGA 735
Query: 366 QEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNN-SMRRKH 542
DD+YAKASAWYHVTYHP YFG Y + +R+HF+SFPWCVYDKL+HIKK S+RR
Sbjct: 736 ---DDVYAKASAWYHVTYHPKYFGCYNEGLNRDHFISFPWCVYDKLVHIKKEKASVRRAR 792
Query: 543 NW-SLEDQFTSSLILS 587
N SLE +F + L L+
Sbjct: 793 NLSSLERRFRNDLHLN 808
>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus]
Length = 1130
Score = 249 bits (636), Expect = 1e-63
Identities = 114/178 (64%), Positives = 149/178 (83%)
Frame = +3
Query: 6 RVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKLA 185
+V+GKLFR VKDIAP +HI+SFT +VAR+ YD DMEV+GFEDY++DA++HK +DYKL
Sbjct: 936 KVIGKLFRAVKDIAPTLSHIRSFTRDVARRCYDCDMEVEGFEDYVEDAFYHKSNYDYKLG 995
Query: 186 NLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSGS 365
NL+DYYGIK+EAE+L GS+M++SKSF RRDAE+I+LAVR+L+KEARTWF+ + +S S
Sbjct: 996 NLLDYYGIKSEAEVLSGSIMRMSKSFTRRRDAEAINLAVRSLRKEARTWFNAREGADSNS 1055
Query: 366 QEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRK 539
DD++AKASAWY+VTYH SY+G Y + R+H+LSFPWCVYDKL+ IK+NN RR+
Sbjct: 1056 ---DDLFAKASAWYYVTYHHSYWGCYNEGMKRDHYLSFPWCVYDKLMQIKENNLRRRE 1110
>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 1133
Score = 245 bits (625), Expect = 2e-62
Identities = 120/196 (61%), Positives = 154/196 (78%), Gaps = 2/196 (1%)
Frame = +3
Query: 3 KRVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKL 182
+ V+GKLFR+VKDIAP+ + FT EVA +SYD DME DGFEDY+DDA+++K +DYKL
Sbjct: 939 QNVIGKLFREVKDIAPNVGSLHFFTKEVASRSYDPDMEYDGFEDYIDDAFYYKSNYDYKL 998
Query: 183 ANLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSG 362
NL+DYYGIK+EAEI+GGS+M++SKSF RRDAESI++AVRAL+KEARTWF++K +S
Sbjct: 999 GNLLDYYGIKSEAEIIGGSIMRMSKSFTKRRDAESINMAVRALRKEARTWFNEKG--SSL 1056
Query: 363 SQEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNN-SMRRK 539
DD+YAKASAWY+VTYH SY+G Y + +R+H+LSFPWCVYDKL+ IK++ S+RR
Sbjct: 1057 DSAADDVYAKASAWYYVTYHHSYWGCYNEGMNRDHYLSFPWCVYDKLVQIKRSKASVRRS 1116
Query: 540 HNW-SLEDQFTSSLIL 584
SLE F L L
Sbjct: 1117 LQMSSLERAFDRRLHL 1132
>ref|XP_006849794.1| hypothetical protein AMTR_s00176p00039530 [Amborella trichopoda]
gi|548853371|gb|ERN11375.1| hypothetical protein
AMTR_s00176p00039530 [Amborella trichopoda]
Length = 1210
Score = 244 bits (624), Expect = 3e-62
Identities = 119/201 (59%), Positives = 157/201 (78%), Gaps = 6/201 (2%)
Frame = +3
Query: 3 KRVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKL 182
+RV+GKLFR+VKD+ PHT+ I SFT VA KSYD DMEVDGFE YLDDA ++K E+D+KL
Sbjct: 1010 RRVIGKLFREVKDLPPHTSAITSFTKSVALKSYDLDMEVDGFELYLDDAHWYKSEYDFKL 1069
Query: 183 ANLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWF-DKKSIFNS 359
A LMD+YGIKTEAEI+ G+++ L+KSF RRDAE+I+LA+R+L+KE R WF +K+S+ +
Sbjct: 1070 AGLMDHYGIKTEAEIVSGNILSLAKSFTKRRDAEAIALAMRSLRKEVRGWFKEKRSVVDE 1129
Query: 360 GSQE-DDDIYAKASAWYHVTYHPSYFGNYRQE--KSREHFLSFPWCVYDKLIHIKKN--N 524
G DDD+YAKASAWYH+TYHP Y+G+Y +E ++R HF+SFPWC+YDKLIHIK++
Sbjct: 1130 GDYSLDDDVYAKASAWYHITYHPEYWGSYFEEDGRNRAHFISFPWCIYDKLIHIKRHRIG 1189
Query: 525 SMRRKHNWSLEDQFTSSLILS 587
R + SL +L+LS
Sbjct: 1190 RGRNSRSSSLASTMERTLMLS 1210
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 244 bits (622), Expect = 4e-62
Identities = 119/193 (61%), Positives = 147/193 (76%), Gaps = 1/193 (0%)
Frame = +3
Query: 9 VMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKLAN 188
V+GKLFR+VKD+AP+ I+S T E + YD DMEVDG+EDY+DDA++HK +DYKL N
Sbjct: 918 VIGKLFREVKDLAPNECFIRSLTRERLERFYDPDMEVDGYEDYVDDAFYHKSNYDYKLGN 977
Query: 189 LMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSGSQ 368
LM+YYGIKTEAEIL G +MK+S+SF +RDAE+I +AVR+L+KEAR+WF++K N
Sbjct: 978 LMEYYGIKTEAEILSGGIMKMSRSFTKQRDAEAIGVAVRSLRKEARSWFNEKG--NGLDS 1035
Query: 369 EDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRKHNW 548
E DD+YAKASAWYHVTYHPSY+G Y + +R HFLSFPWCVYDKLI IKK + RR
Sbjct: 1036 EADDLYAKASAWYHVTYHPSYWGLYNEGMNRNHFLSFPWCVYDKLILIKKKVTSRRNSRL 1095
Query: 549 -SLEDQFTSSLIL 584
SLE F L L
Sbjct: 1096 SSLESLFARGLRL 1108
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 244 bits (622), Expect = 4e-62
Identities = 118/194 (60%), Positives = 152/194 (78%), Gaps = 2/194 (1%)
Frame = +3
Query: 9 VMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKLAN 188
V+GKLFR+VK++AP+ IK T E ++ YD DMEV+GFEDY+DDA+FHK ++DYKL N
Sbjct: 918 VIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDYKLGN 977
Query: 189 LMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSGSQ 368
LMDYYG+KTEAEILGG +MK+S+SF +RDAE+IS+AVR+L+KEAR+WF++K + +
Sbjct: 978 LMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEKG--SELDE 1035
Query: 369 EDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRK--H 542
E DD YAKASAWY+VTYHPSY+G Y + +R+HFLSFPWCVYDKLI IKK + R+
Sbjct: 1036 EIDDAYAKASAWYYVTYHPSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKAAVREALD 1095
Query: 543 NWSLEDQFTSSLIL 584
SLE +F L L
Sbjct: 1096 LSSLEHRFQRGLHL 1109
>ref|XP_006306626.1| hypothetical protein CARUB_v10008144mg [Capsella rubella]
gi|482575337|gb|EOA39524.1| hypothetical protein
CARUB_v10008144mg [Capsella rubella]
Length = 1107
Score = 239 bits (611), Expect = 8e-61
Identities = 117/185 (63%), Positives = 144/185 (77%)
Frame = +3
Query: 3 KRVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKL 182
K V+GKLFR+VK+ AP I+SFTL+VA KSYD DMEV+GFE+Y+D+A+FHKG +DY+L
Sbjct: 921 KNVIGKLFREVKERAPPLISIRSFTLDVALKSYDKDMEVEGFEEYIDEAFFHKGNYDYRL 980
Query: 183 ANLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSG 362
NLMDYYGIKTEAEIL G +M++SKSF RRDAESI AVRAL+KEA +WF+ N+
Sbjct: 981 GNLMDYYGIKTEAEILSGGIMRMSKSFTKRRDAESIGRAVRALRKEALSWFN-----NAE 1035
Query: 363 SQEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRKH 542
+ D D AKASAWYHVTYH SY+G Y + +R+HFLSF WCVYDKL+ IKK N RR+
Sbjct: 1036 DKNDFDESAKASAWYHVTYHSSYWGVYNEGLNRDHFLSFAWCVYDKLVRIKKANVGRRQR 1095
Query: 543 NWSLE 557
+LE
Sbjct: 1096 QEALE 1100
>ref|XP_006416969.1| hypothetical protein EUTSA_v10006629mg [Eutrema salsugineum]
gi|557094740|gb|ESQ35322.1| hypothetical protein
EUTSA_v10006629mg [Eutrema salsugineum]
Length = 1108
Score = 239 bits (609), Expect = 1e-60
Identities = 114/185 (61%), Positives = 144/185 (77%)
Frame = +3
Query: 3 KRVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKL 182
K V+GKLFR+VK+ AP IKSFTL+VA K+YD DMEV GFE+Y+D+A++HKG +DYKL
Sbjct: 920 KNVIGKLFREVKERAPPLISIKSFTLDVASKTYDQDMEVYGFEEYIDEAFYHKGNYDYKL 979
Query: 183 ANLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSG 362
NLMDYYGIKTEAE+L G +M++SKSF RRD ESI AVR+L+KEA +WF+ +
Sbjct: 980 GNLMDYYGIKTEAEVLSGGIMRMSKSFTKRRDGESIGRAVRSLRKEALSWFNA-----AE 1034
Query: 363 SQEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRKH 542
+ED D+ AKASAWYHVTYHPSY+G Y + +R+HFLSF WCVYDKL+ IKK N RR+
Sbjct: 1035 KEEDFDVSAKASAWYHVTYHPSYWGVYNEGLNRDHFLSFAWCVYDKLVRIKKANVGRRQR 1094
Query: 543 NWSLE 557
+L+
Sbjct: 1095 QVTLD 1099
>gb|AAT38751.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1180
Score = 238 bits (608), Expect = 2e-60
Identities = 117/196 (59%), Positives = 151/196 (77%), Gaps = 2/196 (1%)
Frame = +3
Query: 3 KRVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKL 182
+RV+GKLFR+VKD AP + I FT +VAR+SYDAD+EVDGFEDY+D+A+ +K E+D KL
Sbjct: 991 ERVIGKLFRKVKDKAPQASSIAIFTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKL 1050
Query: 183 ANLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSG 362
NLMDYYGIKTEAEIL G +MK SK+F+ R+DAE+IS+AVRAL+KEARTWF +++
Sbjct: 1051 GNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARTWFKRRN----- 1105
Query: 363 SQEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRK- 539
+ DD+ KASAWYHVTYHP+Y+G Y Q R+HF+SFPWCVYD+LI IKK ++ R
Sbjct: 1106 --DIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEKALNRPV 1163
Query: 540 -HNWSLEDQFTSSLIL 584
+ SL Q + L+L
Sbjct: 1164 LNLSSLRAQLSHKLVL 1179
>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
Length = 697
Score = 237 bits (605), Expect = 4e-60
Identities = 116/189 (61%), Positives = 149/189 (78%), Gaps = 1/189 (0%)
Frame = +3
Query: 9 VMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKLAN 188
V+GKLFR+VKD+APH I+SFT +VA +SYDADMEVDGFEDY+ DA+++K ++D+KL +
Sbjct: 472 VIGKLFREVKDVAPHNYDIRSFTRDVAMQSYDADMEVDGFEDYVRDAFYYKSQYDFKLGS 531
Query: 189 LMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSGSQ 368
LMD YGI+TE+EIL GS+MK+SKSF+ R+DAE+I+LAVR+L+KEARTWF+K SG+
Sbjct: 532 LMDCYGIRTESEILSGSLMKMSKSFDKRKDAEAIALAVRSLRKEARTWFNK---MGSGTY 588
Query: 369 ED-DDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRKHN 545
DD+YA ASAWYHVTYHP Y+G Y + +HFLSFPWCVYDKLI IK+ + M H
Sbjct: 589 AGADDVYAIASAWYHVTYHPYYWGCYNEGMYHDHFLSFPWCVYDKLIQIKR-DKMSISHF 647
Query: 546 WSLEDQFTS 572
ED +S
Sbjct: 648 QKPEDNLSS 656
>gb|ABO92977.1| putative RNA-dependent RNA-polymerase [Solanum tuberosum]
Length = 1115
Score = 237 bits (605), Expect = 4e-60
Identities = 117/196 (59%), Positives = 150/196 (76%), Gaps = 2/196 (1%)
Frame = +3
Query: 3 KRVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKL 182
+RV+GKLFR+VKD AP + I FT +VAR+SYDAD+EVDGFEDY+D+A+ +K E+D KL
Sbjct: 926 ERVIGKLFRKVKDKAPQASSIAIFTRDVARRSYDADLEVDGFEDYIDEAFDYKTEYDNKL 985
Query: 183 ANLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSG 362
NLMDYYGIKTEAEIL G +MK SK+F+ R+DAE+IS+AVRAL+KEARTWF +++
Sbjct: 986 GNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARTWFKRRN----- 1040
Query: 363 SQEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRK- 539
+ DD+ KASAWYHVTYHP+Y+G Y Q R+HF+SFPWCVYD+LI IKK + R
Sbjct: 1041 --DIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEKARNRPV 1098
Query: 540 -HNWSLEDQFTSSLIL 584
+ SL Q + L+L
Sbjct: 1099 LNLSSLRAQLSHKLVL 1114
>gb|AAT38687.2| RNA-directed RNA polymerase, putative [Solanum demissum]
Length = 1139
Score = 237 bits (605), Expect = 4e-60
Identities = 116/196 (59%), Positives = 150/196 (76%), Gaps = 2/196 (1%)
Frame = +3
Query: 3 KRVMGKLFRQVKDIAPHTNHIKSFTLEVARKSYDADMEVDGFEDYLDDAWFHKGEFDYKL 182
+RV+GKLFR+VKD AP + I FT +VAR+SYD D+EVDGFEDY+D+A+ +K E+D KL
Sbjct: 950 ERVIGKLFRKVKDKAPQASSIAIFTRDVARRSYDVDLEVDGFEDYIDEAFDYKTEYDNKL 1009
Query: 183 ANLMDYYGIKTEAEILGGSVMKLSKSFNMRRDAESISLAVRALKKEARTWFDKKSIFNSG 362
NLMDYYGIKTEAEIL G +MK SK+F+ R+DAE+IS+AVRAL+KEARTWF +++
Sbjct: 1010 GNLMDYYGIKTEAEILSGGIMKTSKTFDRRKDAEAISIAVRALRKEARTWFKRRN----- 1064
Query: 363 SQEDDDIYAKASAWYHVTYHPSYFGNYRQEKSREHFLSFPWCVYDKLIHIKKNNSMRRK- 539
+ DD+ KASAWYHVTYHP+Y+G Y Q R+HF+SFPWCVYD+LI IKK ++ R
Sbjct: 1065 --DIDDMLPKASAWYHVTYHPTYWGCYNQGLKRDHFISFPWCVYDQLIQIKKEKALNRPV 1122
Query: 540 -HNWSLEDQFTSSLIL 584
+ SL Q + L+L
Sbjct: 1123 LNLSSLRAQLSHKLVL 1138