BLASTX nr result
ID: Papaver27_contig00034797
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00034797
(1082 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g... 204 7e-50
ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding prote... 202 2e-49
ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825... 197 6e-48
ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [S... 195 2e-47
ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protei... 194 5e-47
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops... 192 2e-46
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi... 192 2e-46
gb|AGE44298.1| whirly transcription factor domain containing pro... 191 3e-46
gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus... 191 5e-46
gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays] gi|41392... 191 5e-46
gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PB... 191 5e-46
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi... 190 1e-45
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T... 189 2e-45
ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei... 188 4e-45
ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG4... 188 4e-45
gb|ACG35575.1| DNA binding protein [Zea mays] 188 4e-45
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit... 187 9e-45
ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Caps... 186 1e-44
ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Caps... 185 3e-44
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei... 185 3e-44
>ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group]
gi|50251252|dbj|BAD28032.1| putative Chain C, Structure
Of The Plant Transcriptional Regulator Pbf-2 [Oryza
sativa Japonica Group] gi|50252182|dbj|BAD28177.1|
putative Chain C, Structure Of The Plant Transcriptional
Regulator Pbf-2 [Oryza sativa Japonica Group]
gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa
Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215704516|dbj|BAG94149.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740785|dbj|BAG96941.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218190103|gb|EEC72530.1| hypothetical protein
OsI_05924 [Oryza sativa Indica Group]
gi|222622212|gb|EEE56344.1| hypothetical protein
OsJ_05450 [Oryza sativa Japonica Group]
Length = 228
Score = 204 bits (518), Expect = 7e-50
Identities = 110/234 (47%), Positives = 150/234 (64%), Gaps = 3/234 (1%)
Frame = +3
Query: 99 LSKFL--LPRKVSNTEDALLSRSFVSQAVARPNPASDGDSGRVFVDYTIFKGKGALNMSP 272
LS+F+ R+V++ +DAL S S Q A + SGR F YT+FKGK AL+M P
Sbjct: 4 LSRFVPSSSRRVTDLKDALWSGSLTFQHALSTFAADENTSGRKFASYTVFKGKAALSMQP 63
Query: 273 IPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSE 452
I P F +L+SGG ++++ G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP+E
Sbjct: 64 ILPSFSKLESGGS-RVNKNGSVMLTFFPAVGQRKYDYSKKQLFALSPTEVGSLISLGPAE 122
Query: 453 SAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFE 632
S EFFHDPSM+SS+ GQV+K LSV P+GN +G KT+++ +P+SKAEF
Sbjct: 123 SCEFFHDPSMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSLPISKAEFT 182
Query: 633 VMRSSFNYILPRIMGWDQ-LFNPQLPASANVNPEIRXXXXXXXXHLSPDPEWDR 791
VMR++ ++ LP I+GWDQ L N Q S P + PD EW+R
Sbjct: 183 VMRTALSFALPHILGWDQALTNHQPSPSPASKPRVERP--------HPDSEWER 228
>ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding protein WHY2,
mitochondrial-like [Oryza brachyantha]
Length = 230
Score = 202 bits (515), Expect = 2e-49
Identities = 105/227 (46%), Positives = 146/227 (64%), Gaps = 3/227 (1%)
Frame = +3
Query: 120 RKVSNTEDALLSRSFVSQAVARPNPASDGDSGRVFVDYTIFKGKGALNMSPIPPKFIQLQ 299
R+V++ +DAL S S Q A + SGR F YT+FKGK AL+M P+ P F +L+
Sbjct: 15 RRVTDLKDALWSGSLTFQHALSTLSADENTSGRKFASYTVFKGKAALSMHPVLPSFSKLE 74
Query: 300 SGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPS 479
SGG ++ R G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP+ES EFFHDPS
Sbjct: 75 SGGS-RVSRNGSVMLTFFPAVGQRKYDYSKKQIFALSPTEVGSLISLGPAESCEFFHDPS 133
Query: 480 MQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYI 659
M+SS+ GQV+K LSV P+GN +G KT+++ +P++KAEF VMR++ ++
Sbjct: 134 MKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSLPITKAEFAVMRTTLSFA 193
Query: 660 LPRIMGWDQLF---NPQLPASANVNPEIRXXXXXXXXHLSPDPEWDR 791
LP I+GWDQ+ +P PA++ E PD EW+R
Sbjct: 194 LPHILGWDQVLTNHHPSPPAASKPRAE----------RPHPDSEWER 230
>ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825843 [Brachypodium
distachyon]
Length = 231
Score = 197 bits (501), Expect = 6e-48
Identities = 108/237 (45%), Positives = 149/237 (62%), Gaps = 6/237 (2%)
Frame = +3
Query: 99 LSKFL--LPRKVSNTEDALLSRSFVSQAVARPNPAS--DGDSGRVFVDYTIFKGKGALNM 266
LS+FL RKVS+ +D L S S + + A+ + S R F YT+FKGK AL++
Sbjct: 4 LSRFLPSTSRKVSDLKDVLWSGSVTFEHALSTSAANVDENASARKFASYTVFKGKAALSI 63
Query: 267 SPIPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 446
SPI P F +++SGG ++ + G++ML FFPAVG ++YD+ +Q FALS TE+G+LISLG
Sbjct: 64 SPILPNFTKIESGGS-RVKKNGSVMLTFFPAVGQRQYDYSKKQLFALSPTEVGSLISLGS 122
Query: 447 SESAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 626
+ES EFFHDPSM+SS+ GQV+K LS+ P+GN G KT+++ VPV+KAE
Sbjct: 123 AESCEFFHDPSMKSSHEGQVKKSLSITPLGNDNGYFVNITVLNNVQKTNERLSVPVTKAE 182
Query: 627 FEVMRSSFNYILPRIMGWDQLF--NPQLPASANVNPEIRXXXXXXXXHLSPDPEWDR 791
F VMR++ +Y LP IMGWDQ +PQ P + P + PD EW+R
Sbjct: 183 FAVMRTALSYALPHIMGWDQALTSHPQSPTAPASKPRVERP--------HPDSEWER 231
>ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [Sorghum bicolor]
gi|241933167|gb|EES06312.1| hypothetical protein
SORBIDRAFT_04g004060 [Sorghum bicolor]
Length = 230
Score = 195 bits (496), Expect = 2e-47
Identities = 106/235 (45%), Positives = 147/235 (62%), Gaps = 4/235 (1%)
Frame = +3
Query: 99 LSKFL--LPRKVSNTEDALLSRSFVSQAVARPNPASDGD--SGRVFVDYTIFKGKGALNM 266
LS+FL R+ + +++LLS S Q + A+ D S + + YT+FKGK AL++
Sbjct: 4 LSRFLPSASRRGFDLKESLLSGSLTFQQAVSTSAANIDDNLSSKKYASYTVFKGKAALSI 63
Query: 267 SPIPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 446
PI P F +L+SGG ++ R G++ML FFPAVGP+KYD+ +Q FALS TE+G+LISLGP
Sbjct: 64 QPILPSFSKLESGGS-RVSRNGSIMLTFFPAVGPRKYDFTKKQLFALSPTEVGSLISLGP 122
Query: 447 SESAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 626
+ES EFFHDPSM+SSN G V+K LS+ P+G+ +G KT+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSNEGMVKKSLSITPLGSDSGYFVNITVVNSVEKTNDRLSVPITKAE 182
Query: 627 FEVMRSSFNYILPRIMGWDQLFNPQLPASANVNPEIRXXXXXXXXHLSPDPEWDR 791
F VMR++ ++ LP IMGWDQ A N +P PD EW+R
Sbjct: 183 FAVMRTTLSFALPHIMGWDQ-------ALTNHHPSPPAISKPRVERPHPDSEWER 230
>ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like [Setaria italica]
Length = 229
Score = 194 bits (493), Expect = 5e-47
Identities = 103/235 (43%), Positives = 148/235 (62%), Gaps = 4/235 (1%)
Frame = +3
Query: 99 LSKFL--LPRKVSNTEDALLSRSFVSQAVARPNPAS--DGDSGRVFVDYTIFKGKGALNM 266
LS+FL R+ + ++AL S S Q + A+ + SG+ F YT+FKGK AL++
Sbjct: 4 LSRFLPSASRRGFDPKEALWSGSLTFQQAVSTSAANLDENSSGKKFASYTVFKGKAALSI 63
Query: 267 SPIPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 446
PI P F +++SG +I+R G++ML FFPAVG +KYD+ +Q F+LS TE+G+LISLGP
Sbjct: 64 HPILPSFCKMESGAS-RINRNGSVMLTFFPAVGQRKYDYTKKQLFSLSPTEVGSLISLGP 122
Query: 447 SESAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 626
+ES EFFHDPSM+SS+ GQV+K LS+ P+G+ +G KT+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSHEGQVKKSLSITPLGSDSGYFVNITVLNNMQKTTDRLSVPITKAE 182
Query: 627 FEVMRSSFNYILPRIMGWDQLFNPQLPASANVNPEIRXXXXXXXXHLSPDPEWDR 791
F VMR++ ++ LP IMGWDQ+ A+ P + PD EW+R
Sbjct: 183 FAVMRTALSFALPHIMGWDQVLTRHPAPQASSKPRVERP--------HPDSEWER 229
>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
Length = 237
Score = 192 bits (489), Expect = 2e-46
Identities = 101/219 (46%), Positives = 142/219 (64%), Gaps = 7/219 (3%)
Frame = +3
Query: 156 RSFVSQAVARPNPASDGDSGRVFVDYTIFKGKGALNMSPIPPKFIQLQSGGGMKIDRKGA 335
R F + A+P SGR+F Y+IFKGK AL++ P+ P F ++ SG ++IDR+G+
Sbjct: 39 RGFPGKDAAKP-------SGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGN-LRIDRRGS 90
Query: 336 MMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKK 515
+M+ F PA+G +KYDW+ +Q FALS TE+G+LIS+G +S+EFFHDPSM+SSNAGQVRK
Sbjct: 91 LMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKS 150
Query: 516 LSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDQL-- 689
LSV+P +G+G KT+D F VPV+KAEF VM+++F++ LP IMGW++L
Sbjct: 151 LSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTG 210
Query: 690 -FNPQLPASANVNPEIRXXXXXXXXHLSPDP----EWDR 791
N + S NV+ HL +P EWD+
Sbjct: 211 HVNTEALPSRNVS------------HLKTEPQLELEWDK 237
>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=AtWHY2; Flags: Precursor
gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
thaliana] gi|21689867|gb|AAM67494.1| unknown protein
[Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
hypothetical protein [Arabidopsis thaliana]
gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
protein WHY2 [Arabidopsis thaliana]
Length = 238
Score = 192 bits (489), Expect = 2e-46
Identities = 101/219 (46%), Positives = 142/219 (64%), Gaps = 7/219 (3%)
Frame = +3
Query: 156 RSFVSQAVARPNPASDGDSGRVFVDYTIFKGKGALNMSPIPPKFIQLQSGGGMKIDRKGA 335
R F + A+P SGR+F Y+IFKGK AL++ P+ P F ++ SG ++IDR+G+
Sbjct: 40 RGFPGKDAAKP-------SGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGN-LRIDRRGS 91
Query: 336 MMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKK 515
+M+ F PA+G +KYDW+ +Q FALS TE+G+LIS+G +S+EFFHDPSM+SSNAGQVRK
Sbjct: 92 LMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKS 151
Query: 516 LSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDQL-- 689
LSV+P +G+G KT+D F VPV+KAEF VM+++F++ LP IMGW++L
Sbjct: 152 LSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTG 211
Query: 690 -FNPQLPASANVNPEIRXXXXXXXXHLSPDP----EWDR 791
N + S NV+ HL +P EWD+
Sbjct: 212 HVNTEALPSRNVS------------HLKTEPQLELEWDK 238
>gb|AGE44298.1| whirly transcription factor domain containing protein [Musa AB
Group]
Length = 245
Score = 191 bits (486), Expect = 3e-46
Identities = 101/226 (44%), Positives = 144/226 (63%), Gaps = 2/226 (0%)
Frame = +3
Query: 120 RKVSNTEDALLSRSFVSQAVARPNPASDGDSGRVFVDYTIFKGKGALNMSPIPPKFIQLQ 299
R +S + L++ S +V P + S R +V+YT+FKGK AL++SPI P F ++
Sbjct: 30 RSISTSGPGLVNDG--SSSVRPPFSPTGSSSVRRYVEYTVFKGKAALSVSPILPTFREVD 87
Query: 300 SGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPS 479
SG ++ +KG ++L F+PA+G +KYDWQ +Q FALS TE+G+LI LGP+ES EFFHDPS
Sbjct: 88 SGVS-RVHKKGCVILTFWPAIGQRKYDWQKKQAFALSPTEVGSLIGLGPAESCEFFHDPS 146
Query: 480 MQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYI 659
M+SS GQV+K LS+ P+ + AG KT+++F +PVSKAEF +R+ F+Y+
Sbjct: 147 MKSSLEGQVKKSLSISPLNDKAGYLLNLSVVNNIQKTNERFSLPVSKAEFTAIRTVFSYV 206
Query: 660 LPRIMGWDQLFNPQLPASANVNPEIRXXXXXXXXHLSPDP--EWDR 791
LP IMGW Q +PQ P++A P+ + PDP EW R
Sbjct: 207 LPHIMGWSQAASPQPPSTATHTPKEQIEE-------RPDPSLEWGR 245
>gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus guttatus]
Length = 236
Score = 191 bits (485), Expect = 5e-46
Identities = 109/241 (45%), Positives = 149/241 (61%), Gaps = 10/241 (4%)
Frame = +3
Query: 99 LSKFLLPRKVSNTEDALLSRSFVSQA---------VARPNPASDGDSG-RVFVDYTIFKG 248
LS+ LL S++ D+L +S VS+A + + S G S +VF Y+I+KG
Sbjct: 4 LSRLLLQ---SSSRDSLSLKSLVSEATIDLKLLRGLTTQSGISTGKSAAKVFAPYSIYKG 60
Query: 249 KGALNMSPIPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGA 428
K AL+ P+ P F +LQSGG K++R+G++ML F+PA+G +KYDW RQ FALS TE+G+
Sbjct: 61 KAALSADPLLPMFTKLQSGG-YKVERRGSIMLTFWPAIGERKYDWDKRQKFALSATEVGS 119
Query: 429 LISLGPSESAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYV 608
LISLG +S EFFHDPSM SSNAGQVRK LS++ +G+G KT+D+F V
Sbjct: 120 LISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILKTNDRFVV 179
Query: 609 PVSKAEFEVMRSSFNYILPRIMGWDQLFNPQLPASANVNPEIRXXXXXXXXHLSPDPEWD 788
PV+ AEF VMR++F + LP ++GWDQ N Q+P A+ + P EWD
Sbjct: 180 PVTTAEFAVMRTAFTFALPHLIGWDQYTN-QVPHCASKSSPTAAAAALPQL---PSSEWD 235
Query: 789 R 791
R
Sbjct: 236 R 236
>gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays]
gi|413926544|gb|AFW66476.1| DNA binding protein isoform
2 [Zea mays]
Length = 274
Score = 191 bits (485), Expect = 5e-46
Identities = 107/235 (45%), Positives = 149/235 (63%), Gaps = 4/235 (1%)
Frame = +3
Query: 99 LSKFLLP--RKVSNTEDALLSRSFV-SQAVARPNPASDGD-SGRVFVDYTIFKGKGALNM 266
LS+FL R+ + +++L S S QAV+ DG+ SG+ F YT+FKGK AL++
Sbjct: 46 LSRFLPSACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSI 105
Query: 267 SPIPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 446
PI P F +L+SGG ++ + G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP
Sbjct: 106 HPILPSFSKLESGGS-RVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGP 164
Query: 447 SESAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 626
+ES EFFHDPSM+SSN G V+K LS+ P+G+ +G +T+D+ VP++KAE
Sbjct: 165 AESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPITKAE 224
Query: 627 FEVMRSSFNYILPRIMGWDQLFNPQLPASANVNPEIRXXXXXXXXHLSPDPEWDR 791
F V+R++ ++ LP IMGWDQ PA A P H PD EW+R
Sbjct: 225 FAVIRTTLSFALPHIMGWDQALTNHHPAPA---PPASSRPTVERPH--PDSEWER 274
>gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PBF-2 like
transcription factor [Zea mays]
gi|323388771|gb|ADX60190.1| PBF-2 like transcription
factor [Zea mays]
Length = 232
Score = 191 bits (485), Expect = 5e-46
Identities = 107/235 (45%), Positives = 149/235 (63%), Gaps = 4/235 (1%)
Frame = +3
Query: 99 LSKFLLP--RKVSNTEDALLSRSFV-SQAVARPNPASDGD-SGRVFVDYTIFKGKGALNM 266
LS+FL R+ + +++L S S QAV+ DG+ SG+ F YT+FKGK AL++
Sbjct: 4 LSRFLPSACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSI 63
Query: 267 SPIPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 446
PI P F +L+SGG ++ + G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP
Sbjct: 64 HPILPSFSKLESGGS-RVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGP 122
Query: 447 SESAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 626
+ES EFFHDPSM+SSN G V+K LS+ P+G+ +G +T+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPITKAE 182
Query: 627 FEVMRSSFNYILPRIMGWDQLFNPQLPASANVNPEIRXXXXXXXXHLSPDPEWDR 791
F V+R++ ++ LP IMGWDQ PA A P H PD EW+R
Sbjct: 183 FAVIRTTLSFALPHIMGWDQALTNHHPAPA---PPASSRPTVERPH--PDSEWER 232
>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 190 bits (482), Expect = 1e-45
Identities = 96/201 (47%), Positives = 134/201 (66%), Gaps = 7/201 (3%)
Frame = +3
Query: 210 SGRVFVDYTIFKGKGALNMSPIPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQN 389
SGR+F Y+IFKGK AL++ P+ P F ++ SG ++IDR+G++M+ F PA+G +KYDW+
Sbjct: 55 SGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGN-LRIDRRGSLMMTFMPAIGERKYDWEK 113
Query: 390 RQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXX 569
+Q FALS TE+G+LIS+G +S+EFFHDPSM+SSNAGQVRK LS++P +G+G
Sbjct: 114 KQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLSV 173
Query: 570 XXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDQLF---NPQLPASANVNPEIRX 740
KT+D F VPV+KAEF VM+++F++ LP IMGW++L N + NV
Sbjct: 174 NNGILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGQGNTEALPPRNVT----- 228
Query: 741 XXXXXXXHLSPDP----EWDR 791
HL DP EWD+
Sbjct: 229 -------HLKTDPQLELEWDK 242
>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
Chain C, Crystal Structure Of Why2 From Arabidopsis
Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
Structure Of Why2 From Arabidopsis Thaliana
Length = 177
Score = 189 bits (479), Expect = 2e-45
Identities = 87/160 (54%), Positives = 122/160 (76%)
Frame = +3
Query: 210 SGRVFVDYTIFKGKGALNMSPIPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQN 389
SGR+F Y+IFKGK AL++ P+ P F ++ SG ++IDR+G++M+ F PA+G +KYDW+
Sbjct: 8 SGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGN-LRIDRRGSLMMTFMPAIGERKYDWEK 66
Query: 390 RQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXX 569
+Q FALS TE+G+LIS+G +S+EFFHDPSM+SSNAGQVRK LSV+P +G+G
Sbjct: 67 KQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSV 126
Query: 570 XXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDQL 689
KT+D F VPV+KAEF VM+++F++ LP IMGW++L
Sbjct: 127 NNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRL 166
>ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 2 [Solanum lycopersicum]
Length = 235
Score = 188 bits (477), Expect = 4e-45
Identities = 93/180 (51%), Positives = 128/180 (71%), Gaps = 1/180 (0%)
Frame = +3
Query: 159 SFVSQAVARPNPASDGD-SGRVFVDYTIFKGKGALNMSPIPPKFIQLQSGGGMKIDRKGA 335
+F + + R + +DG GRVF Y++FKGK AL+ P P F +L SGG +K++R+G
Sbjct: 33 TFAAFSTVRQDVVADGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGG-VKLNRRGV 91
Query: 336 MMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKK 515
+ML F+P+VG +KYDW+ RQ FALS TE+G+LIS+G +S+EFFHDPSM SSNAGQVRK
Sbjct: 92 IMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKS 151
Query: 516 LSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDQLFN 695
LS++P +G+G KT+D+F VPV+ AEF VMR++F++ LP IMGWD+ N
Sbjct: 152 LSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTN 211
>ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG48390.1| DNA binding
protein [Zea mays]
Length = 232
Score = 188 bits (477), Expect = 4e-45
Identities = 106/235 (45%), Positives = 148/235 (62%), Gaps = 4/235 (1%)
Frame = +3
Query: 99 LSKFLLP--RKVSNTEDALLSRSFV-SQAVARPNPASDGD-SGRVFVDYTIFKGKGALNM 266
LS+FL R+ + +++L S S QAV+ DG+ SG+ F YT+FKGK AL++
Sbjct: 4 LSRFLPSACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSI 63
Query: 267 SPIPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 446
PI F +L+SGG ++ + G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP
Sbjct: 64 HPILXSFSKLESGGS-RVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGP 122
Query: 447 SESAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 626
+ES EFFHDPSM+SSN G V+K LS+ P+G+ +G +T+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPITKAE 182
Query: 627 FEVMRSSFNYILPRIMGWDQLFNPQLPASANVNPEIRXXXXXXXXHLSPDPEWDR 791
F V+R++ ++ LP IMGWDQ PA A P H PD EW+R
Sbjct: 183 FAVIRTTLSFALPHIMGWDQALTNHHPAPA---PPASSRPTVERPH--PDSEWER 232
>gb|ACG35575.1| DNA binding protein [Zea mays]
Length = 230
Score = 188 bits (477), Expect = 4e-45
Identities = 98/209 (46%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
Frame = +3
Query: 171 QAVARPNPASDGD-SGRVFVDYTIFKGKGALNMSPIPPKFIQLQSGGGMKIDRKGAMMLN 347
QAV+ DG+ SG+ F YT+FKGK AL++ PI P F +L+SGG ++ + G++ML
Sbjct: 31 QAVSTAATNLDGNLSGKKFASYTVFKGKAALSIHPILPSFSKLESGGS-RVSKNGSVMLT 89
Query: 348 FFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKKLSVQ 527
FFPAVG +KYD+ +Q FALS TE+G+LISLGP+ES EFFHDPSM+SSN G V+K LS+
Sbjct: 90 FFPAVGQRKYDYTKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSNEGTVKKSLSIT 149
Query: 528 PIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDQLFNPQLP 707
P+G+ +G +T+D+ VP++KAEF V+R++ ++ LP IMGWDQ P
Sbjct: 150 PLGSDSGYFVNITVVNSAERTNDRLSVPITKAEFAVIRTTLSFALPHIMGWDQALTNHHP 209
Query: 708 A-SANVNPEIRXXXXXXXXHLSPDPEWDR 791
A A+ P + PD EW+R
Sbjct: 210 APPASSRPTVERP--------HPDSEWER 230
>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
Full=Single-stranded DNA-bindig protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=StWHY2; Flags: Precursor
gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
tuberosum]
Length = 238
Score = 187 bits (474), Expect = 9e-45
Identities = 93/181 (51%), Positives = 126/181 (69%), Gaps = 2/181 (1%)
Frame = +3
Query: 159 SFVSQAVARPNPASDGDS--GRVFVDYTIFKGKGALNMSPIPPKFIQLQSGGGMKIDRKG 332
+F + R N +D GRVF Y++FKGK AL+ P P F +L SGG +K++R+G
Sbjct: 35 TFAGFSTVRQNVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGG-VKLNRRG 93
Query: 333 AMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRK 512
+ML F+P+VG +KYDW+ RQ FALS TE+G+LIS+G +S+EFFHDPSM SSNAGQVRK
Sbjct: 94 VIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRK 153
Query: 513 KLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDQLF 692
LS++P +G+G KT+D+F VPV+ AEF VMR++F++ LP IMGWD+
Sbjct: 154 SLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFT 213
Query: 693 N 695
N
Sbjct: 214 N 214
>ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571468|gb|EOA35656.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 234
Score = 186 bits (473), Expect = 1e-44
Identities = 93/202 (46%), Positives = 134/202 (66%), Gaps = 2/202 (0%)
Frame = +3
Query: 90 RRPLSKFLLPRKVSNTEDALLSRSFVSQAVARPNPASDG--DSGRVFVDYTIFKGKGALN 263
R LS+ L + S + A R F S + + SGRVF Y IFKGK AL+
Sbjct: 6 RTLLSRSLCDQSKSLFDGASTLRGFASWSTGSGFSGKEAAKPSGRVFAPYAIFKGKAALS 65
Query: 264 MSPIPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLG 443
+ P+ P F ++ SG +++DR+G++M+ F PA G +KYDW+ +Q FALS TE+G+LIS+G
Sbjct: 66 VEPVLPTFTEIDSGN-LRLDRRGSLMMTFMPASGERKYDWEKKQKFALSPTEVGSLISMG 124
Query: 444 PSESAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKA 623
+S+EFFHDPSM+SSNAGQVRK LS++P +G+G KT+D+ VPV+ A
Sbjct: 125 SKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLGVINSILKTNDRIVVPVTTA 184
Query: 624 EFEVMRSSFNYILPRIMGWDQL 689
EF VM+++F+++LP +MGWD+L
Sbjct: 185 EFTVMKTAFSFVLPHLMGWDRL 206
>ref|XP_006302759.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571469|gb|EOA35657.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 235
Score = 185 bits (470), Expect = 3e-44
Identities = 93/203 (45%), Positives = 134/203 (66%), Gaps = 3/203 (1%)
Frame = +3
Query: 90 RRPLSKFLLPRKVSNTEDALLSRSFVSQAVARPNPASDG---DSGRVFVDYTIFKGKGAL 260
R LS+ L + S + A R F S + + SGRVF Y IFKGK AL
Sbjct: 6 RTLLSRSLCDQSKSLFDGASTLRGFASWSTGSGFSGKEEAAKPSGRVFAPYAIFKGKAAL 65
Query: 261 NMSPIPPKFIQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISL 440
++ P+ P F ++ SG +++DR+G++M+ F PA G +KYDW+ +Q FALS TE+G+LIS+
Sbjct: 66 SVEPVLPTFTEIDSGN-LRLDRRGSLMMTFMPASGERKYDWEKKQKFALSPTEVGSLISM 124
Query: 441 GPSESAEFFHDPSMQSSNAGQVRKKLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSK 620
G +S+EFFHDPSM+SSNAGQVRK LS++P +G+G KT+D+ VPV+
Sbjct: 125 GSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLGVINSILKTNDRIVVPVTT 184
Query: 621 AEFEVMRSSFNYILPRIMGWDQL 689
AEF VM+++F+++LP +MGWD+L
Sbjct: 185 AEFTVMKTAFSFVLPHLMGWDRL 207
>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 1 [Solanum lycopersicum]
Length = 238
Score = 185 bits (470), Expect = 3e-44
Identities = 92/181 (50%), Positives = 127/181 (70%), Gaps = 2/181 (1%)
Frame = +3
Query: 159 SFVSQAVARPNPASDGDS--GRVFVDYTIFKGKGALNMSPIPPKFIQLQSGGGMKIDRKG 332
+F + + R + +D GRVF Y++FKGK AL+ P P F +L SGG +K++R+G
Sbjct: 35 TFAAFSTVRQDVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGG-VKLNRRG 93
Query: 333 AMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRK 512
+ML F+P+VG +KYDW+ RQ FALS TE+G+LIS+G +S+EFFHDPSM SSNAGQVRK
Sbjct: 94 VIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRK 153
Query: 513 KLSVQPIGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDQLF 692
LS++P +G+G KT+D+F VPV+ AEF VMR++F++ LP IMGWD+
Sbjct: 154 SLSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFT 213
Query: 693 N 695
N
Sbjct: 214 N 214