BLASTX nr result
ID: Papaver27_contig00034796
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00034796
(1032 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g... 197 6e-48
gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus... 196 2e-47
ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding prote... 195 2e-47
ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825... 193 8e-47
ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [S... 192 1e-46
ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protei... 191 5e-46
gb|AGE44298.1| whirly transcription factor domain containing pro... 190 9e-46
gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays] gi|41392... 190 9e-46
gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PB... 190 9e-46
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops... 189 1e-45
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi... 189 1e-45
gb|ACG35575.1| DNA binding protein [Zea mays] 189 2e-45
ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG4... 187 8e-45
ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei... 186 1e-44
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi... 186 1e-44
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit... 186 1e-44
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei... 184 7e-44
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T... 183 9e-44
ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Popu... 181 4e-43
ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum] 180 7e-43
>ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group]
gi|50251252|dbj|BAD28032.1| putative Chain C, Structure
Of The Plant Transcriptional Regulator Pbf-2 [Oryza
sativa Japonica Group] gi|50252182|dbj|BAD28177.1|
putative Chain C, Structure Of The Plant Transcriptional
Regulator Pbf-2 [Oryza sativa Japonica Group]
gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa
Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215704516|dbj|BAG94149.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740785|dbj|BAG96941.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218190103|gb|EEC72530.1| hypothetical protein
OsI_05924 [Oryza sativa Indica Group]
gi|222622212|gb|EEE56344.1| hypothetical protein
OsJ_05450 [Oryza sativa Japonica Group]
Length = 228
Score = 197 bits (501), Expect = 6e-48
Identities = 106/226 (46%), Positives = 144/226 (63%), Gaps = 1/226 (0%)
Frame = +2
Query: 140 RKVSNTEDALLLSRSFVSQAVARPNPVSDGDSGKVFVDYTIFKGKGALSMSPIPPKFIQL 319
R+V++ +DAL S S Q + SG+ F YT+FKGK ALSM PI P F +L
Sbjct: 13 RRVTDLKDALW-SGSLTFQHALSTFAADENTSGRKFASYTVFKGKAALSMQPILPSFSKL 71
Query: 320 QSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDP 499
+S GG+++++ G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP+ES EFFHDP
Sbjct: 72 ES-GGSRVNKNGSVMLTFFPAVGQRKYDYSKKQLFALSPTEVGSLISLGPAESCEFFHDP 130
Query: 500 SIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNY 679
S++SS+ GQV+K LSV PLGN +G KT+++ +P+SKAEF VMR++ ++
Sbjct: 131 SMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSLPISKAEFTVMRTALSF 190
Query: 680 ILPRIIGWD-LLFNPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
LP I+GWD L N Q S P P PD EW+R
Sbjct: 191 ALPHILGWDQALTNHQPSPSPASKPRVERP--------HPDSEWER 228
>gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus guttatus]
Length = 236
Score = 196 bits (497), Expect = 2e-47
Identities = 113/242 (46%), Positives = 153/242 (63%), Gaps = 10/242 (4%)
Frame = +2
Query: 119 LSEFLLPRKVSNTEDALLLSRSFVSQA---------VARPNPVSDGDSG-KVFVDYTIFK 268
LS LL S++ D+L L +S VS+A + + +S G S KVF Y+I+K
Sbjct: 4 LSRLLLQ---SSSRDSLSL-KSLVSEATIDLKLLRGLTTQSGISTGKSAAKVFAPYSIYK 59
Query: 269 GKGALSMSPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIG 448
GK ALS P+ P F +LQS GG K++R+G++ML F+PA+G +KYDW RQ FALS TE+G
Sbjct: 60 GKAALSADPLLPMFTKLQS-GGYKVERRGSIMLTFWPAIGERKYDWDKRQKFALSATEVG 118
Query: 449 ALISLGPSESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFY 628
+LISLG +S EFFHDPS+ SSNAGQVRK LS++ +G+G KT+D+F
Sbjct: 119 SLISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILKTNDRFV 178
Query: 629 VPVSKAEFEVMRSSFNYILPRIIGWDLLFNPQMPASANVNPETREPGMEPEMHLSPDPEW 808
VPV+ AEF VMR++F + LP +IGWD N Q+P A+ + T P++ P EW
Sbjct: 179 VPVTTAEFAVMRTAFTFALPHLIGWDQYTN-QVPHCASKSSPTAAAAALPQL---PSSEW 234
Query: 809 DR 814
DR
Sbjct: 235 DR 236
>ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding protein WHY2,
mitochondrial-like [Oryza brachyantha]
Length = 230
Score = 195 bits (496), Expect = 2e-47
Identities = 104/228 (45%), Positives = 146/228 (64%), Gaps = 3/228 (1%)
Frame = +2
Query: 140 RKVSNTEDALLLSRSFVSQAVARPNPVSDGDSGKVFVDYTIFKGKGALSMSPIPPKFIQL 319
R+V++ +DAL S S Q + SG+ F YT+FKGK ALSM P+ P F +L
Sbjct: 15 RRVTDLKDALW-SGSLTFQHALSTLSADENTSGRKFASYTVFKGKAALSMHPVLPSFSKL 73
Query: 320 QSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDP 499
+S GG+++ R G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP+ES EFFHDP
Sbjct: 74 ES-GGSRVSRNGSVMLTFFPAVGQRKYDYSKKQIFALSPTEVGSLISLGPAESCEFFHDP 132
Query: 500 SIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNY 679
S++SS+ GQV+K LSV PLGN +G KT+++ +P++KAEF VMR++ ++
Sbjct: 133 SMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSLPITKAEFAVMRTTLSF 192
Query: 680 ILPRIIGWDLLF---NPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
LP I+GWD + +P PA++ P P PD EW+R
Sbjct: 193 ALPHILGWDQVLTNHHPSPPAAS--KPRAERP--------HPDSEWER 230
>ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825843 [Brachypodium
distachyon]
Length = 231
Score = 193 bits (491), Expect = 8e-47
Identities = 107/237 (45%), Positives = 147/237 (62%), Gaps = 5/237 (2%)
Frame = +2
Query: 119 LSEFL--LPRKVSNTEDALLLSRSFVSQAVARPNP-VSDGDSGKVFVDYTIFKGKGALSM 289
LS FL RKVS+ +D L A++ V + S + F YT+FKGK ALS+
Sbjct: 4 LSRFLPSTSRKVSDLKDVLWSGSVTFEHALSTSAANVDENASARKFASYTVFKGKAALSI 63
Query: 290 SPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 469
SPI P F +++S GG+++ + G++ML FFPAVG ++YD+ +Q FALS TE+G+LISLG
Sbjct: 64 SPILPNFTKIES-GGSRVKKNGSVMLTFFPAVGQRQYDYSKKQLFALSPTEVGSLISLGS 122
Query: 470 SESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 649
+ES EFFHDPS++SS+ GQV+K LS+ PLGN G KT+++ VPV+KAE
Sbjct: 123 AESCEFFHDPSMKSSHEGQVKKSLSITPLGNDNGYFVNITVLNNVQKTNERLSVPVTKAE 182
Query: 650 FEVMRSSFNYILPRIIGWD--LLFNPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
F VMR++ +Y LP I+GWD L +PQ P + P P PD EW+R
Sbjct: 183 FAVMRTALSYALPHIMGWDQALTSHPQSPTAPASKPRVERP--------HPDSEWER 231
>ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [Sorghum bicolor]
gi|241933167|gb|EES06312.1| hypothetical protein
SORBIDRAFT_04g004060 [Sorghum bicolor]
Length = 230
Score = 192 bits (489), Expect = 1e-46
Identities = 106/235 (45%), Positives = 148/235 (62%), Gaps = 3/235 (1%)
Frame = +2
Query: 119 LSEFL--LPRKVSNTEDALLLSRSFVSQAVARPNP-VSDGDSGKVFVDYTIFKGKGALSM 289
LS FL R+ + +++LL QAV+ + D S K + YT+FKGK ALS+
Sbjct: 4 LSRFLPSASRRGFDLKESLLSGSLTFQQAVSTSAANIDDNLSSKKYASYTVFKGKAALSI 63
Query: 290 SPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 469
PI P F +L+S GG+++ R G++ML FFPAVGP+KYD+ +Q FALS TE+G+LISLGP
Sbjct: 64 QPILPSFSKLES-GGSRVSRNGSIMLTFFPAVGPRKYDFTKKQLFALSPTEVGSLISLGP 122
Query: 470 SESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 649
+ES EFFHDPS++SSN G V+K LS+ PLG+ +G KT+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSNEGMVKKSLSITPLGSDSGYFVNITVVNSVEKTNDRLSVPITKAE 182
Query: 650 FEVMRSSFNYILPRIIGWDLLFNPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
F VMR++ ++ LP I+GWD P+ P +P +E PD EW+R
Sbjct: 183 FAVMRTTLSFALPHIMGWDQALTNHHPSP----PAISKPRVE---RPHPDSEWER 230
>ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like [Setaria italica]
Length = 229
Score = 191 bits (484), Expect = 5e-46
Identities = 103/235 (43%), Positives = 146/235 (62%), Gaps = 3/235 (1%)
Frame = +2
Query: 119 LSEFL--LPRKVSNTEDALLLSRSFVSQAVARPNP-VSDGDSGKVFVDYTIFKGKGALSM 289
LS FL R+ + ++AL QAV+ + + SGK F YT+FKGK ALS+
Sbjct: 4 LSRFLPSASRRGFDPKEALWSGSLTFQQAVSTSAANLDENSSGKKFASYTVFKGKAALSI 63
Query: 290 SPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 469
PI P F +++S G ++I+R G++ML FFPAVG +KYD+ +Q F+LS TE+G+LISLGP
Sbjct: 64 HPILPSFCKMES-GASRINRNGSVMLTFFPAVGQRKYDYTKKQLFSLSPTEVGSLISLGP 122
Query: 470 SESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 649
+ES EFFHDPS++SS+ GQV+K LS+ PLG+ +G KT+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSHEGQVKKSLSITPLGSDSGYFVNITVLNNMQKTTDRLSVPITKAE 182
Query: 650 FEVMRSSFNYILPRIIGWDLLFNPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
F VMR++ ++ LP I+GWD + A+ P P PD EW+R
Sbjct: 183 FAVMRTALSFALPHIMGWDQVLTRHPAPQASSKPRVERP--------HPDSEWER 229
>gb|AGE44298.1| whirly transcription factor domain containing protein [Musa AB
Group]
Length = 245
Score = 190 bits (482), Expect = 9e-46
Identities = 103/237 (43%), Positives = 148/237 (62%), Gaps = 13/237 (5%)
Frame = +2
Query: 143 KVSNTEDALLLSRSFVSQAVARPNPVSDGDSG-------------KVFVDYTIFKGKGAL 283
+ +N +D+ LS S S + + P V+DG S + +V+YT+FKGK AL
Sbjct: 16 RATNVKDSFWLS-SQRSISTSGPGLVNDGSSSVRPPFSPTGSSSVRRYVEYTVFKGKAAL 74
Query: 284 SMSPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISL 463
S+SPI P F ++ S G +++ +KG ++L F+PA+G +KYDWQ +Q FALS TE+G+LI L
Sbjct: 75 SVSPILPTFREVDS-GVSRVHKKGCVILTFWPAIGQRKYDWQKKQAFALSPTEVGSLIGL 133
Query: 464 GPSESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSK 643
GP+ES EFFHDPS++SS GQV+K LS+ PL + AG KT+++F +PVSK
Sbjct: 134 GPAESCEFFHDPSMKSSLEGQVKKSLSISPLNDKAGYLLNLSVVNNIQKTNERFSLPVSK 193
Query: 644 AEFEVMRSSFNYILPRIIGWDLLFNPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
AEF +R+ F+Y+LP I+GW +PQ P++A T P + E P EW R
Sbjct: 194 AEFTAIRTVFSYVLPHIMGWSQAASPQPPSTA-----THTPKEQIEERPDPSLEWGR 245
>gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays]
gi|413926544|gb|AFW66476.1| DNA binding protein isoform
2 [Zea mays]
Length = 274
Score = 190 bits (482), Expect = 9e-46
Identities = 106/235 (45%), Positives = 149/235 (63%), Gaps = 3/235 (1%)
Frame = +2
Query: 119 LSEFLLP--RKVSNTEDALLLSRSFVSQAVARPNPVSDGD-SGKVFVDYTIFKGKGALSM 289
LS FL R+ + +++L QAV+ DG+ SGK F YT+FKGK ALS+
Sbjct: 46 LSRFLPSACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSI 105
Query: 290 SPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 469
PI P F +L+S GG+++ + G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP
Sbjct: 106 HPILPSFSKLES-GGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGP 164
Query: 470 SESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 649
+ES EFFHDPS++SSN G V+K LS+ PLG+ +G +T+D+ VP++KAE
Sbjct: 165 AESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPITKAE 224
Query: 650 FEVMRSSFNYILPRIIGWDLLFNPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
F V+R++ ++ LP I+GWD PA A P + P +E PD EW+R
Sbjct: 225 FAVIRTTLSFALPHIMGWDQALTNHHPAPA--PPASSRPTVE---RPHPDSEWER 274
>gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PBF-2 like
transcription factor [Zea mays]
gi|323388771|gb|ADX60190.1| PBF-2 like transcription
factor [Zea mays]
Length = 232
Score = 190 bits (482), Expect = 9e-46
Identities = 106/235 (45%), Positives = 149/235 (63%), Gaps = 3/235 (1%)
Frame = +2
Query: 119 LSEFLLP--RKVSNTEDALLLSRSFVSQAVARPNPVSDGD-SGKVFVDYTIFKGKGALSM 289
LS FL R+ + +++L QAV+ DG+ SGK F YT+FKGK ALS+
Sbjct: 4 LSRFLPSACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSI 63
Query: 290 SPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 469
PI P F +L+S GG+++ + G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP
Sbjct: 64 HPILPSFSKLES-GGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGP 122
Query: 470 SESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 649
+ES EFFHDPS++SSN G V+K LS+ PLG+ +G +T+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPITKAE 182
Query: 650 FEVMRSSFNYILPRIIGWDLLFNPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
F V+R++ ++ LP I+GWD PA A P + P +E PD EW+R
Sbjct: 183 FAVIRTTLSFALPHIMGWDQALTNHHPAPA--PPASSRPTVE---RPHPDSEWER 232
>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
Length = 237
Score = 189 bits (481), Expect = 1e-45
Identities = 97/204 (47%), Positives = 137/204 (67%), Gaps = 3/204 (1%)
Frame = +2
Query: 179 RSFVSQAVARPNPVSDGDSGKVFVDYTIFKGKGALSMSPIPPKFIQLQSWGGTKIDRKGA 358
R F + A+P SG++F Y+IFKGK ALS+ P+ P F ++ S G +IDR+G+
Sbjct: 39 RGFPGKDAAKP-------SGRLFAPYSIFKGKAALSVEPVLPSFTEIDS-GNLRIDRRGS 90
Query: 359 MMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSIQSSNAGQVRKK 538
+M+ F PA+G +KYDW+ +Q FALS TE+G+LIS+G +S+EFFHDPS++SSNAGQVRK
Sbjct: 91 LMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKS 150
Query: 539 LSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIIGWDLL-- 712
LSV+P +G+G KT+D F VPV+KAEF VM+++F++ LP I+GW+ L
Sbjct: 151 LSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTG 210
Query: 713 -FNPQMPASANVNPETREPGMEPE 781
N + S NV+ EP +E E
Sbjct: 211 HVNTEALPSRNVSHLKTEPQLELE 234
>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=AtWHY2; Flags: Precursor
gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
thaliana] gi|21689867|gb|AAM67494.1| unknown protein
[Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
hypothetical protein [Arabidopsis thaliana]
gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
protein WHY2 [Arabidopsis thaliana]
Length = 238
Score = 189 bits (481), Expect = 1e-45
Identities = 97/204 (47%), Positives = 137/204 (67%), Gaps = 3/204 (1%)
Frame = +2
Query: 179 RSFVSQAVARPNPVSDGDSGKVFVDYTIFKGKGALSMSPIPPKFIQLQSWGGTKIDRKGA 358
R F + A+P SG++F Y+IFKGK ALS+ P+ P F ++ S G +IDR+G+
Sbjct: 40 RGFPGKDAAKP-------SGRLFAPYSIFKGKAALSVEPVLPSFTEIDS-GNLRIDRRGS 91
Query: 359 MMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSIQSSNAGQVRKK 538
+M+ F PA+G +KYDW+ +Q FALS TE+G+LIS+G +S+EFFHDPS++SSNAGQVRK
Sbjct: 92 LMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKS 151
Query: 539 LSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIIGWDLL-- 712
LSV+P +G+G KT+D F VPV+KAEF VM+++F++ LP I+GW+ L
Sbjct: 152 LSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTG 211
Query: 713 -FNPQMPASANVNPETREPGMEPE 781
N + S NV+ EP +E E
Sbjct: 212 HVNTEALPSRNVSHLKTEPQLELE 235
>gb|ACG35575.1| DNA binding protein [Zea mays]
Length = 230
Score = 189 bits (479), Expect = 2e-45
Identities = 105/235 (44%), Positives = 148/235 (62%), Gaps = 3/235 (1%)
Frame = +2
Query: 119 LSEFLLP--RKVSNTEDALLLSRSFVSQAVARPNPVSDGD-SGKVFVDYTIFKGKGALSM 289
LS FL R+ + +++L QAV+ DG+ SGK F YT+FKGK ALS+
Sbjct: 4 LSRFLPSACRRGFDLKESLWCGSLTFQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSI 63
Query: 290 SPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 469
PI P F +L+S GG+++ + G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP
Sbjct: 64 HPILPSFSKLES-GGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGP 122
Query: 470 SESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 649
+ES EFFHDPS++SSN G V+K LS+ PLG+ +G +T+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPITKAE 182
Query: 650 FEVMRSSFNYILPRIIGWDLLFNPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
F V+R++ ++ LP I+GWD PA P + P +E PD EW+R
Sbjct: 183 FAVIRTTLSFALPHIMGWDQALTNHHPAP----PASSRPTVE---RPHPDSEWER 230
>ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG48390.1| DNA binding
protein [Zea mays]
Length = 232
Score = 187 bits (474), Expect = 8e-45
Identities = 105/235 (44%), Positives = 148/235 (62%), Gaps = 3/235 (1%)
Frame = +2
Query: 119 LSEFLLP--RKVSNTEDALLLSRSFVSQAVARPNPVSDGD-SGKVFVDYTIFKGKGALSM 289
LS FL R+ + +++L QAV+ DG+ SGK F YT+FKGK ALS+
Sbjct: 4 LSRFLPSACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSI 63
Query: 290 SPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 469
PI F +L+S GG+++ + G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP
Sbjct: 64 HPILXSFSKLES-GGSRVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGP 122
Query: 470 SESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 649
+ES EFFHDPS++SSN G V+K LS+ PLG+ +G +T+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPITKAE 182
Query: 650 FEVMRSSFNYILPRIIGWDLLFNPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
F V+R++ ++ LP I+GWD PA A P + P +E PD EW+R
Sbjct: 183 FAVIRTTLSFALPHIMGWDQALTNHHPAPA--PPASSRPTVE---RPHPDSEWER 232
>ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 2 [Solanum lycopersicum]
Length = 235
Score = 186 bits (473), Expect = 1e-44
Identities = 99/212 (46%), Positives = 139/212 (65%), Gaps = 1/212 (0%)
Frame = +2
Query: 182 SFVSQAVARPNPVSDGD-SGKVFVDYTIFKGKGALSMSPIPPKFIQLQSWGGTKIDRKGA 358
+F + + R + V+DG G+VF Y++FKGK ALS P P F +L S GG K++R+G
Sbjct: 33 TFAAFSTVRQDVVADGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDS-GGVKLNRRGV 91
Query: 359 MMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSIQSSNAGQVRKK 538
+ML F+P+VG +KYDW+ RQ FALS TE+G+LIS+G +S+EFFHDPS+ SSNAGQVRK
Sbjct: 92 IMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKS 151
Query: 539 LSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIIGWDLLFN 718
LS++P +G+G KT+D+F VPV+ AEF VMR++F++ LP I+GWD F
Sbjct: 152 LSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWD-RFT 210
Query: 719 PQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
+ S + +P P + + EWDR
Sbjct: 211 NRPSESISQSPSKVVPQL-------MEAEWDR 235
>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 186 bits (473), Expect = 1e-44
Identities = 94/198 (47%), Positives = 132/198 (66%), Gaps = 4/198 (2%)
Frame = +2
Query: 233 SGKVFVDYTIFKGKGALSMSPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQN 412
SG++F Y+IFKGK ALS+ P+ P F ++ S G +IDR+G++M+ F PA+G +KYDW+
Sbjct: 55 SGRLFAPYSIFKGKAALSVEPVLPSFTEIDS-GNLRIDRRGSLMMTFMPAIGERKYDWEK 113
Query: 413 RQGFALSVTEIGALISLGPSESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXX 592
+Q FALS TE+G+LIS+G +S+EFFHDPS++SSNAGQVRK LS++P +G+G
Sbjct: 114 KQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLSV 173
Query: 593 XXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIIGWDLLFNPQMPASANVNPETREPGM 772
KT+D F VPV+KAEF VM+++F++ LP I+GW+ L + N E P
Sbjct: 174 NNGILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRL-------TGQGNTEALPP-- 224
Query: 773 EPEMHLSPDP----EWDR 814
HL DP EWD+
Sbjct: 225 RNVTHLKTDPQLELEWDK 242
>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
Full=Single-stranded DNA-bindig protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=StWHY2; Flags: Precursor
gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
tuberosum]
Length = 238
Score = 186 bits (472), Expect = 1e-44
Identities = 106/245 (43%), Positives = 147/245 (60%), Gaps = 2/245 (0%)
Frame = +2
Query: 86 KFSQVLTVRRPLSEFLLPRKVSNTEDALLLSRSFVSQAVARPNPVSDGDS--GKVFVDYT 259
K S++L R L LP + +F + R N V+D G+VF Y+
Sbjct: 3 KVSRLLHPRNQLLHKKLPGECVKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPYS 62
Query: 260 IFKGKGALSMSPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVT 439
+FKGK ALS P P F +L S GG K++R+G +ML F+P+VG +KYDW+ RQ FALS T
Sbjct: 63 VFKGKAALSAEPRLPTFNRLDS-GGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSAT 121
Query: 440 EIGALISLGPSESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSD 619
E+G+LIS+G +S+EFFHDPS+ SSNAGQVRK LS++P +G+G KT+D
Sbjct: 122 EVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTND 181
Query: 620 QFYVPVSKAEFEVMRSSFNYILPRIIGWDLLFNPQMPASANVNPETREPGMEPEMHLSPD 799
+F VPV+ AEF VMR++F++ LP I+GWD F + S + +P P + +
Sbjct: 182 RFTVPVTTAEFAVMRTAFSFALPHIMGWD-RFTNRPSESISQSPSKVVPQL-------ME 233
Query: 800 PEWDR 814
EWDR
Sbjct: 234 AEWDR 238
>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 1 [Solanum lycopersicum]
Length = 238
Score = 184 bits (466), Expect = 7e-44
Identities = 98/213 (46%), Positives = 138/213 (64%), Gaps = 2/213 (0%)
Frame = +2
Query: 182 SFVSQAVARPNPVSDGDS--GKVFVDYTIFKGKGALSMSPIPPKFIQLQSWGGTKIDRKG 355
+F + + R + V+D G+VF Y++FKGK ALS P P F +L S GG K++R+G
Sbjct: 35 TFAAFSTVRQDVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLDS-GGVKLNRRG 93
Query: 356 AMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSIQSSNAGQVRK 535
+ML F+P+VG +KYDW+ RQ FALS TE+G+LIS+G +S+EFFHDPS+ SSNAGQVRK
Sbjct: 94 VIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRK 153
Query: 536 KLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIIGWDLLF 715
LS++P +G+G KT+D+F VPV+ AEF VMR++F++ LP I+GWD F
Sbjct: 154 SLSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWD-RF 212
Query: 716 NPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
+ S + +P P + + EWDR
Sbjct: 213 TNRPSESISQSPSKVVPQL-------MEAEWDR 238
>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
Chain C, Crystal Structure Of Why2 From Arabidopsis
Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
Structure Of Why2 From Arabidopsis Thaliana
Length = 177
Score = 183 bits (465), Expect = 9e-44
Identities = 85/160 (53%), Positives = 120/160 (75%)
Frame = +2
Query: 233 SGKVFVDYTIFKGKGALSMSPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQN 412
SG++F Y+IFKGK ALS+ P+ P F ++ S G +IDR+G++M+ F PA+G +KYDW+
Sbjct: 8 SGRLFAPYSIFKGKAALSVEPVLPSFTEIDS-GNLRIDRRGSLMMTFMPAIGERKYDWEK 66
Query: 413 RQGFALSVTEIGALISLGPSESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXX 592
+Q FALS TE+G+LIS+G +S+EFFHDPS++SSNAGQVRK LSV+P +G+G
Sbjct: 67 KQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSV 126
Query: 593 XXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIIGWDLL 712
KT+D F VPV+KAEF VM+++F++ LP I+GW+ L
Sbjct: 127 NNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRL 166
>ref|XP_002303313.2| hypothetical protein POPTR_0003s04700g [Populus trichocarpa]
gi|118484514|gb|ABK94132.1| unknown [Populus
trichocarpa] gi|550342417|gb|EEE78292.2| hypothetical
protein POPTR_0003s04700g [Populus trichocarpa]
Length = 229
Score = 181 bits (459), Expect = 4e-43
Identities = 97/230 (42%), Positives = 141/230 (61%), Gaps = 19/230 (8%)
Frame = +2
Query: 182 SFVSQAVARPNPVSDGDS-------------------GKVFVDYTIFKGKGALSMSPIPP 304
+F AV +P V DG + +VF Y++FKGK ALS+ P+ P
Sbjct: 9 NFNRNAVGKPTDVRDGSALHALTFQASISTGGKSSIQDRVFAPYSVFKGKAALSVEPVLP 68
Query: 305 KFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAE 484
F + S G ++DR+G+MML F PA+G +KYD++ RQ FALS TE+G+LIS GP +S E
Sbjct: 69 TFSKFGS-GNLRVDRRGSMMLTFLPAIGERKYDYEKRQKFALSATEVGSLISTGPKDSCE 127
Query: 485 FFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMR 664
FFHDPS+ SSNAGQVRK LS++P +G+G KT+++F VPV+ AEF V++
Sbjct: 128 FFHDPSMLSSNAGQVRKNLSIKPHADGSGYFVSLSVVNNILKTTERFTVPVTTAEFTVLK 187
Query: 665 SSFNYILPRIIGWDLLFNPQMPASANVNPETREPGMEPEMHLSPDPEWDR 814
++ ++ LP I+GWD L P +P + ++ ++P+M PD EWD+
Sbjct: 188 TACSFALPHIMGWDRLTTP-LPGTL----ASKLSKVDPQM---PDLEWDK 229
>ref|XP_006352086.1| PREDICTED: Why2 protein [Solanum tuberosum]
Length = 238
Score = 180 bits (457), Expect = 7e-43
Identities = 103/245 (42%), Positives = 144/245 (58%), Gaps = 2/245 (0%)
Frame = +2
Query: 86 KFSQVLTVRRPLSEFLLPRKVSNTEDALLLSRSFVSQAVARPNPVSDGDS--GKVFVDYT 259
K S++L R L LP + +F + R N V+D G+VF Y+
Sbjct: 3 KVSRLLHPRNQLLHKKLPGECVKGSIWQHAINTFAGFSTVRQNVVADAGKREGRVFAPYS 62
Query: 260 IFKGKGALSMSPIPPKFIQLQSWGGTKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVT 439
+FKGK ALS P P F +L S GG K++R+G +ML F+P+VG +KYDW+ RQ L T
Sbjct: 63 VFKGKAALSAEPRLPTFNRLDS-GGVKLNRRGVIMLTFWPSVGERKYDWEKRQVMCLYAT 121
Query: 440 EIGALISLGPSESAEFFHDPSIQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSD 619
E+G+LIS+G +S+EFFHDPS+ SSNAGQVRK LS++P +G+G KT+D
Sbjct: 122 EVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKTND 181
Query: 620 QFYVPVSKAEFEVMRSSFNYILPRIIGWDLLFNPQMPASANVNPETREPGMEPEMHLSPD 799
+F VPV+ AEF VMR++F++ LP I+GWD F + S + +P P + +
Sbjct: 182 RFTVPVTTAEFAVMRTAFSFALPHIMGWD-RFTNRPSESISQSPSKVVPQL-------ME 233
Query: 800 PEWDR 814
EWDR
Sbjct: 234 AEWDR 238