BLASTX nr result
ID: Papaver27_contig00034215
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00034215
(487 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 69 7e-24
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 72 1e-23
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 71 1e-23
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 71 1e-23
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 70 1e-23
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 70 2e-23
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 75 2e-23
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali... 75 2e-23
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 71 3e-23
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 70 3e-22
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 67 4e-22
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 67 7e-22
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 73 1e-21
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 64 5e-21
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 65 5e-21
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 73 6e-21
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 68 1e-20
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 68 1e-20
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 65 2e-20
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 66 4e-20
>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
[Arabidopsis thaliana]
Length = 1164
Score = 68.6 bits (166), Expect(2) = 7e-24
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +1
Query: 277 IG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMVY 456
+G LPVRYLGLPL+S +L+ + PLI ++T R S R LSFAGR+ L+ +V G+V
Sbjct: 654 LGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFAGRVQLLASVISGIVN 713
Query: 457 FWFSCFIL 480
FW S FIL
Sbjct: 714 FWISSFIL 721
Score = 67.8 bits (164), Expect(2) = 7e-24
Identities = 30/73 (41%), Positives = 47/73 (64%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
E+ SGLLQ + S HPK +++HL FADD+++FF G S + + ++DF+ +
Sbjct: 563 EVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGW 622
Query: 182 SGLVVNCNKTSLF 220
SGL++N NKT L+
Sbjct: 623 SGLLMNTNKTQLY 635
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 72.0 bits (175), Expect(2) = 1e-23
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = +2
Query: 5 ILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNFS 184
+LS ++ + N G HPKCK LTHLCFADD++VF G +S + + + KDF+ S
Sbjct: 815 VLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKS 874
Query: 185 GLVVNCNKTSLFLLQWS 235
GL ++ K++L+L + S
Sbjct: 875 GLHISLEKSTLYLAEVS 891
Score = 63.5 bits (153), Expect(2) = 1e-23
Identities = 32/67 (47%), Positives = 44/67 (65%)
Frame = +1
Query: 280 G*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMVYF 459
G LPVRYLG PL++ +++ D PL+ +V +I S AR LS+AGRL LI +V V + F
Sbjct: 907 GQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNF 966
Query: 460 WFSCFIL 480
W S + L
Sbjct: 967 WMSAYRL 973
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 71.2 bits (173), Expect(2) = 1e-23
Identities = 37/96 (38%), Positives = 56/96 (58%)
Frame = +1
Query: 199 LQQDFSFSSSVEPGVLDYFTSYLDCSIG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRI 378
+++ + + V+ V +G LPVRYLGLPL+S RL+ DC PLI ++ K+I
Sbjct: 626 MEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLPLIEQLRKKI 685
Query: 379 KS*KARHLSFAGRLLLIKAVSVGMVYFWFSCFILSK 486
++ +R LSFAGRL LI + + FW + F L +
Sbjct: 686 EAWTSRFLSFAGRLNLISSTLWSICNFWMAAFRLPR 721
Score = 64.3 bits (155), Expect(2) = 1e-23
Identities = 27/74 (36%), Positives = 50/74 (67%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
++LS +L + V + +G HPKC+ LTHL FADD+++ G V+S + +V+ +F+ +
Sbjct: 560 DVLSKMLDKAVGARQFGYHPKCRAIGLTHLSFADDLMILSDGKVRSIDGIVKVLYEFAKW 619
Query: 182 SGLVVNCNKTSLFL 223
SGL ++ K++++L
Sbjct: 620 SGLKISMEKSTMYL 633
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 70.9 bits (172), Expect(2) = 1e-23
Identities = 39/71 (54%), Positives = 48/71 (67%)
Frame = +1
Query: 274 SIG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMV 453
S G LPVRYLGLPLI+ RLS DC PL+ +V KRI S +R LS+AGRL LI +V +
Sbjct: 763 SSGQLPVRYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSIC 822
Query: 454 YFWFSCFILSK 486
FW + F L +
Sbjct: 823 NFWLAAFRLPR 833
Score = 64.3 bits (155), Expect(2) = 1e-23
Identities = 27/74 (36%), Positives = 50/74 (67%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
++LS +L + + ++G HPKCK LTHL FADD++V G ++S + + +V +F+ +
Sbjct: 672 DVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKW 731
Query: 182 SGLVVNCNKTSLFL 223
SGL ++ K++++L
Sbjct: 732 SGLRISLEKSTVYL 745
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 70.5 bits (171), Expect(2) = 1e-23
Identities = 32/73 (43%), Positives = 46/73 (63%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
E+LS +L Q +G HPKCK LTHLCFADD+++ G V+S + +V+ F+
Sbjct: 77 EVLSKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKR 136
Query: 182 SGLVVNCNKTSLF 220
SGL +N KT+L+
Sbjct: 137 SGLQINMEKTTLY 149
Score = 64.7 bits (156), Expect(2) = 1e-23
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +1
Query: 277 IG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMVY 456
+G LPVRYLGLPL++ RL+ D PL ++ RI + +R+LSFAGRL LI +V +
Sbjct: 169 LGQLPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMN 228
Query: 457 FWFSCFIL 480
FW S F L
Sbjct: 229 FWMSAFRL 236
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 69.7 bits (169), Expect(2) = 2e-23
Identities = 30/73 (41%), Positives = 47/73 (64%)
Frame = +2
Query: 5 ILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNFS 184
+LS ++ + N G HPKCK LTHLCFADD++VF G +S + + + K+F+ S
Sbjct: 246 VLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKS 305
Query: 185 GLVVNCNKTSLFL 223
GL ++ K++L+L
Sbjct: 306 GLHISLEKSTLYL 318
Score = 65.1 bits (157), Expect(2) = 2e-23
Identities = 33/67 (49%), Positives = 45/67 (67%)
Frame = +1
Query: 280 G*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMVYF 459
G LPVRYLGLPL++ +++ D PL+ +V +I S AR LS+AGRL LI +V V + F
Sbjct: 338 GQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNF 397
Query: 460 WFSCFIL 480
W S + L
Sbjct: 398 WMSAYRL 404
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 75.1 bits (183), Expect(2) = 2e-23
Identities = 39/72 (54%), Positives = 48/72 (66%)
Frame = +1
Query: 265 LDCSIG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSV 444
L S G LPVRYLG+PL+S ++ D QPL+ R+ R S ARHLSFAGRL L+K+V
Sbjct: 301 LGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIY 360
Query: 445 GMVYFWFSCFIL 480
+ FW S FIL
Sbjct: 361 STINFWASIFIL 372
Score = 59.3 bits (142), Expect(2) = 2e-23
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
+IL+ L + + LHPKC +THL FADDILVF G++ S + ++ F
Sbjct: 213 DILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKG 272
Query: 182 SGLVVNCNKTSLFL 223
SGL +N KT+L L
Sbjct: 273 SGLGINLQKTALLL 286
>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 543
Score = 75.1 bits (183), Expect(2) = 2e-23
Identities = 39/72 (54%), Positives = 48/72 (66%)
Frame = +1
Query: 265 LDCSIG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSV 444
L S G LPVRYLG+PL+S ++ D QPL+ R+ R S ARHLSFAGRL L+K+V
Sbjct: 301 LGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIY 360
Query: 445 GMVYFWFSCFIL 480
+ FW S FIL
Sbjct: 361 STINFWASIFIL 372
Score = 59.3 bits (142), Expect(2) = 2e-23
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
+IL+ L + + LHPKC +THL FADDILVF G++ S + ++ F
Sbjct: 213 DILARSLDLGAVEGRFVLHPKCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKG 272
Query: 182 SGLVVNCNKTSLFL 223
SGL +N KT+L L
Sbjct: 273 SGLGINLQKTALLL 286
>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1115
Score = 70.9 bits (172), Expect(2) = 3e-23
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
E+LS +L Q + +G HPKCK LTHLCFADD+++ G V+S + +V+ F+
Sbjct: 589 EVLSKMLDQAAGAKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKR 648
Query: 182 SGLVVNCNKTSLF 220
SGL +N KT+L+
Sbjct: 649 SGLKINMEKTTLY 661
Score = 63.2 bits (152), Expect(2) = 3e-23
Identities = 33/65 (50%), Positives = 43/65 (66%)
Frame = +1
Query: 286 LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMVYFWF 465
LPVRYLGLPL++ RL+ D PL ++ RI + +R+LSFAGRL LI +V + FW
Sbjct: 684 LPVRYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWM 743
Query: 466 SCFIL 480
S F L
Sbjct: 744 SAFRL 748
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 70.1 bits (170), Expect(2) = 3e-22
Identities = 38/96 (39%), Positives = 53/96 (55%)
Frame = +1
Query: 199 LQQDFSFSSSVEPGVLDYFTSYLDCSIG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRI 378
L++ F + + P +G LPV+YLGLPL++ R++ D PL+ ++ RI
Sbjct: 885 LEKSTIFMAGISPNAKTSILQQFPFELGTLPVKYLGLPLLTKRMTQSDYLPLVEKIRARI 944
Query: 379 KS*KARHLSFAGRLLLIKAVSVGMVYFWFSCFILSK 486
S R LSFAGRL LIK+V + FW S F L K
Sbjct: 945 TSWTNRFLSFAGRLQLIKSVLSSITNFWLSVFRLPK 980
Score = 60.8 bits (146), Expect(2) = 3e-22
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +2
Query: 5 ILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNFS 184
+LS +L + + HP+C+ LTHLCFADDI+VF G KS Q + + F+ S
Sbjct: 820 VLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMVFSDGTSKSIQGTLAIFEKFAAMS 879
Query: 185 GLVVNCNKTSLFL 223
L ++ K+++F+
Sbjct: 880 WLKISLEKSTIFM 892
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 66.6 bits (161), Expect(2) = 4e-22
Identities = 29/73 (39%), Positives = 48/73 (65%)
Frame = +2
Query: 5 ILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNFS 184
+LS ++ + + N G HPKC+ LTHLCFADD++VF G+ S + + V K+F+ S
Sbjct: 970 VLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRS 1029
Query: 185 GLVVNCNKTSLFL 223
GL ++ K++++L
Sbjct: 1030 GLQISLEKSTIYL 1042
Score = 63.5 bits (153), Expect(2) = 4e-22
Identities = 33/67 (49%), Positives = 44/67 (65%)
Frame = +1
Query: 280 G*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMVYF 459
G LPVRYLGLPL++ +++ D PLI V +I S AR LS+AGRL L+ +V V + F
Sbjct: 1062 GQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANF 1121
Query: 460 WFSCFIL 480
W S + L
Sbjct: 1122 WMSAYRL 1128
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 67.4 bits (163), Expect(2) = 7e-22
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Frame = +1
Query: 238 GVLDY----FTSYLDCSIG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLS 405
GV D+ +S +G LPVRYLGLPL++ RL+ D PLI ++ +RI +R+LS
Sbjct: 468 GVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYLS 527
Query: 406 FAGRLLLIKAVSVGMVYFWFSCFILSK 486
FAGRL LI +V + FW + F L +
Sbjct: 528 FAGRLSLINSVLWSITNFWMNAFRLPR 554
Score = 62.0 bits (149), Expect(2) = 7e-22
Identities = 27/74 (36%), Positives = 46/74 (62%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
++LS +L + + +G HP+CK LTHLCFADD+++ G ++S + +V+ F+
Sbjct: 393 DVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAK 452
Query: 182 SGLVVNCNKTSLFL 223
GL + KT+L+L
Sbjct: 453 LGLKICMEKTTLYL 466
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 72.8 bits (177), Expect(2) = 1e-21
Identities = 36/66 (54%), Positives = 45/66 (68%)
Frame = +1
Query: 280 G*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMVYF 459
G LPVRYLG+PL+S ++ D QPL+ R+ R S ARHLSFAGRL L+K+V + F
Sbjct: 759 GSLPVRYLGVPLMSQKMRRQDYQPLVDRINSRFTSWTARHLSFAGRLQLLKSVIYSTINF 818
Query: 460 WFSCFI 477
W S FI
Sbjct: 819 WASVFI 824
Score = 56.2 bits (134), Expect(2) = 1e-21
Identities = 29/74 (39%), Positives = 40/74 (54%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
++LS L ++ + LHP C +THL FADD+LVF G S + ++ DF
Sbjct: 666 DVLSKSLDLGALNGLFNLHPNCLAPIITHLSFADDVLVFSDGAASSIAGILTILDDFRQG 725
Query: 182 SGLVVNCNKTSLFL 223
SGL +N KT L L
Sbjct: 726 SGLGINREKTELLL 739
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 63.5 bits (153), Expect(2) = 5e-21
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +1
Query: 277 IG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMVY 456
+G LPVRYLGLPL++ RL+ D PL+ + K+I + R+LS+AGRL LI +V +
Sbjct: 291 VGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICN 350
Query: 457 FWFSCFILSK 486
FW + F L +
Sbjct: 351 FWLAAFRLPR 360
Score = 63.2 bits (152), Expect(2) = 5e-21
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
++LS LL Q + +G H +CK LTHL FADD++V G V+S + +V F+ F
Sbjct: 199 DVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKF 258
Query: 182 SGLVVNCNKTSLFL 223
SGL ++ K++++L
Sbjct: 259 SGLKISMEKSTIYL 272
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 64.7 bits (156), Expect(2) = 5e-21
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
E+LS +L + LHPKC +THL FADDI++F G +S + + FS
Sbjct: 119 EVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRA 178
Query: 182 SGLVVNCNKTSLFL 223
SGL +N KT +FL
Sbjct: 179 SGLYLNTEKTEIFL 192
Score = 62.0 bits (149), Expect(2) = 5e-21
Identities = 35/69 (50%), Positives = 43/69 (62%)
Frame = +1
Query: 280 G*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMVYF 459
G LPVRYLG+ L RL+ D QPL+ RV +I S R+LS+AGRL L+ V GMV
Sbjct: 212 GYLPVRYLGVSLSPVRLTKSDYQPLLDRVKAKINSWTTRYLSYAGRLQLVGTVIYGMVNA 271
Query: 460 WFSCFILSK 486
W F+L K
Sbjct: 272 WGMIFMLPK 280
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 72.8 bits (177), Expect(2) = 6e-21
Identities = 40/90 (44%), Positives = 55/90 (61%)
Frame = +1
Query: 217 FSSSVEPGVLDYFTSYLDCSIG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KAR 396
F + V+ D + S+G PVRYLG+PLI+S+L DC PL+ R+ RIKS + +
Sbjct: 566 FLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENK 625
Query: 397 HLSFAGRLLLIKAVSVGMVYFWFSCFILSK 486
LSFAGRL LI++V + +W S IL K
Sbjct: 626 VLSFAGRLQLIQSVLSSIQVYWASHLILPK 655
Score = 53.5 bits (127), Expect(2) = 6e-21
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Frame = +2
Query: 2 EILSGLLQQQVISCN--YGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFS 175
E+LS +Q++ I+C+ + H +C L+HLCFADD+L+F G+ S + L +F
Sbjct: 493 EVLSLCIQRR-INCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFE 551
Query: 176 NFSGLVVNCNKTSLFL 223
+ S L N +++ +FL
Sbjct: 552 SLSSLKANVSESKIFL 567
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 68.2 bits (165), Expect(2) = 1e-20
Identities = 37/96 (38%), Positives = 55/96 (57%)
Frame = +1
Query: 199 LQQDFSFSSSVEPGVLDYFTSYLDCSIG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRI 378
+++ FS+ + ++ +G LP+RYLGLPL++ RLS +D PLI ++ KRI
Sbjct: 291 MEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYLGLPLVTKRLSSVDYAPLIEQIRKRI 350
Query: 379 KS*KARHLSFAGRLLLIKAVSVGMVYFWFSCFILSK 486
S +R LSFAGR LI ++ FW S F L +
Sbjct: 351 GSWSSRFLSFAGRFNLISSIIWSSCNFWLSAFQLPR 386
Score = 57.4 bits (137), Expect(2) = 1e-20
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
++LS LL + V G HP CK LTHL FADD+++ G +S + + +V FS +
Sbjct: 225 DVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKW 284
Query: 182 SGLVVNCNKTSLF 220
SGL ++ K+++F
Sbjct: 285 SGLKISMEKSTIF 297
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 67.8 bits (164), Expect(2) = 1e-20
Identities = 33/70 (47%), Positives = 48/70 (68%)
Frame = +1
Query: 277 IG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMVY 456
IG LP+RYLGLPL++ +L + +PL+ ++T R +S + LSFAGR+ LI +V G +
Sbjct: 757 IGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSIN 816
Query: 457 FWFSCFILSK 486
FW S F+L K
Sbjct: 817 FWMSTFLLPK 826
Score = 57.4 bits (137), Expect(2) = 1e-20
Identities = 28/74 (37%), Positives = 43/74 (58%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
E S LL + S HPK ++HL FADD+++FF G S + + + DF+++
Sbjct: 666 EAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICETLDDFASW 725
Query: 182 SGLVVNCNKTSLFL 223
SGL VN +K+ L+L
Sbjct: 726 SGLKVNKDKSHLYL 739
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 489
Score = 65.5 bits (158), Expect(2) = 2e-20
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = +1
Query: 274 SIG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRIKS*KARHLSFAGRLLLIKAVSVGMV 453
++G LPVRYLGLPL++ +LS D PLI + K+I S AR LS+AGRL LI +V +
Sbjct: 145 AVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSIC 204
Query: 454 YFWFSCFILSK 486
FW F L +
Sbjct: 205 NFWMGAFRLPR 215
Score = 58.9 bits (141), Expect(2) = 2e-20
Identities = 27/72 (37%), Positives = 45/72 (62%)
Frame = +2
Query: 5 ILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNFS 184
+LS LL + +G HP+CK LTHL FADD++V G V+S + + +V + F+ S
Sbjct: 55 VLSKLLDKATGQRRFGYHPRCKQMGLTHLSFADDLMVLSDGKVRSIEGIVEVFETFAKCS 114
Query: 185 GLVVNCNKTSLF 220
GL ++ K++++
Sbjct: 115 GLRISMEKSTVY 126
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 65.9 bits (159), Expect(2) = 4e-20
Identities = 36/96 (37%), Positives = 54/96 (56%)
Frame = +1
Query: 199 LQQDFSFSSSVEPGVLDYFTSYLDCSIG*LPVRYLGLPLISSRLSYMDCQPLICRVTKRI 378
L++ + + V P + + +G LPVRYLGLPL++ RL+ D PL+ ++ KRI
Sbjct: 385 LEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPVRYLGLPLVTKRLTSADYSPLLEQIKKRI 444
Query: 379 KS*KARHLSFAGRLLLIKAVSVGMVYFWFSCFILSK 486
+ R SFAGR LIK+V + FW + F L +
Sbjct: 445 ATWTFRFFSFAGRFNLIKSVLWSICNFWLAAFRLPR 480
Score = 57.8 bits (138), Expect(2) = 4e-20
Identities = 26/74 (35%), Positives = 45/74 (60%)
Frame = +2
Query: 2 EILSGLLQQQVISCNYGLHPKCKGTKLTHLCFADDILVFFKGNVKSAQVLSQVIKDFSNF 181
++LS +L + +G HPKC+ LTHL FADD++V G +S + + +V +F
Sbjct: 319 DVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKR 378
Query: 182 SGLVVNCNKTSLFL 223
SGL ++ K++L++
Sbjct: 379 SGLRISLEKSTLYM 392