BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00034103
         (744 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   247   3e-63
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              247   3e-63
gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus...   244   2e-62
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei...   244   3e-62
ref|XP_006827418.1| hypothetical protein AMTR_s00009p00072720 [A...   242   9e-62
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...   241   1e-61
ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF,...   236   5e-60
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun...   236   8e-60
ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF,...   235   1e-59
ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF,...   235   1e-59
gb|AFK38759.1| unknown [Lotus japonicus]                              234   2e-59
ref|XP_007162766.1| hypothetical protein PHAVU_001G178600g [Phas...   234   2e-59
ref|XP_007144359.1| hypothetical protein PHAVU_007G149600g [Phas...   234   2e-59
ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF,...   234   3e-59
ref|XP_003625673.1| RNA polymerase sigma factor rpoD [Medicago t...   231   2e-58
ref|XP_003625657.1| RNA polymerase sigma factor rpoD [Medicago t...   231   2e-58
ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF,...   231   2e-58
ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF,...   231   3e-58
ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutr...   229   6e-58
ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutr...   229   6e-58

>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  247 bits (631), Expect = 3e-63
 Identities = 122/184 (66%), Positives = 152/184 (82%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQ-PTNEEIAKQVGFT 179
           AYWWIRQ+VRKAIF HS++IRLPEN+Y+ L +VK AK + I+EGH  PT EEIA++VG T
Sbjct: 388 AYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGIT 447

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           + KL+RLL+ T+ PLSMQ+P+W+DQ TTFQ VTAD  +E P+  V+K LMR+HVRNLL V
Sbjct: 448 IEKLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHV 507

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKE+RIIRLR+GI DG  ++L++IG VFG SKERVRQLE RAL KL+ CLSS GLE+Y
Sbjct: 508 LTPKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESY 567

Query: 540 TNLL 551
           T+LL
Sbjct: 568 TDLL 571


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  247 bits (631), Expect = 3e-63
 Identities = 122/184 (66%), Positives = 152/184 (82%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQ-PTNEEIAKQVGFT 179
           AYWWIRQ+VRKAIF HS++IRLPEN+Y+ L +VK AK + I+EGH  PT EEIA++VG T
Sbjct: 377 AYWWIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGIT 436

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           + KL+RLL+ T+ PLSMQ+P+W+DQ TTFQ VTAD  +E P+  V+K LMR+HVRNLL V
Sbjct: 437 IEKLQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHV 496

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKE+RIIRLR+GI DG  ++L++IG VFG SKERVRQLE RAL KL+ CLSS GLE+Y
Sbjct: 497 LTPKERRIIRLRFGIGDGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESY 556

Query: 540 TNLL 551
           T+LL
Sbjct: 557 TDLL 560


>gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Mimulus guttatus]
          Length = 559

 Score =  244 bits (624), Expect = 2e-62
 Identities = 118/184 (64%), Positives = 147/184 (79%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGFT 179
           AYWWIRQS+RK++F HS++IRLPENVY  L +V  AK+  IK+G HQPT E+IA   G +
Sbjct: 375 AYWWIRQSIRKSLFQHSRTIRLPENVYTLLSKVYEAKKTCIKQGNHQPTKEDIAAAAGLS 434

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V KL+RLL T++ PLSMQ+P+W DQ TTFQ +TAD  VE P+ G SK +MR+H RNLLSV
Sbjct: 435 VEKLDRLLYTSRVPLSMQKPVWMDQDTTFQEITADTAVEAPDVGASKQIMRQHTRNLLSV 494

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L P+E++IIRLR+GIEDGEQKSL+ IG  FGLSKER+RQ+E+RAL KL+ CLSS GL AY
Sbjct: 495 LNPRERKIIRLRFGIEDGEQKSLSDIGAGFGLSKERIRQIESRALYKLKQCLSSHGLSAY 554

Query: 540 TNLL 551
             +L
Sbjct: 555 AEML 558


>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
           gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
           FACTOR family protein [Populus trichocarpa]
          Length = 535

 Score =  244 bits (622), Expect = 3e-62
 Identities = 118/184 (64%), Positives = 151/184 (82%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGFT 179
           AYWWIRQ++ KAIF HS++IRLPENVY  L +V  AK   I+EG HQPT EEIA++VG  
Sbjct: 351 AYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTAEEIARRVGIA 410

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           + KLE+LL  T+TPLSMQ+ +WSDQ TTFQ +TAD ++E P+  V+K LMR+H+R LL++
Sbjct: 411 IDKLEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDMSVAKQLMRKHIRGLLNI 470

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L  KE+RIIRLR+GIEDG+QKSL++IG+VFGLSKERVRQLE+RAL KL+ C+ S GL+AY
Sbjct: 471 LSLKERRIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGLDAY 530

Query: 540 TNLL 551
            +LL
Sbjct: 531 ADLL 534


>ref|XP_006827418.1| hypothetical protein AMTR_s00009p00072720 [Amborella trichopoda]
           gi|548832038|gb|ERM94834.1| hypothetical protein
           AMTR_s00009p00072720 [Amborella trichopoda]
          Length = 573

 Score =  242 bits (618), Expect = 9e-62
 Identities = 108/183 (59%), Positives = 153/183 (83%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQPTNEEIAKQVGFTV 182
           AYWWIRQ++RK++F +S++IRLPENVY  L ++KNA+ +  +EGH+PTNEE+A++VG TV
Sbjct: 390 AYWWIRQAIRKSLFQNSRTIRLPENVYGLLTKIKNARRLYFQEGHRPTNEELAQRVGITV 449

Query: 183 GKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSVL 362
            KLE + + +K P+S+Q+P+WSDQ  T Q +TADPKVETPE+ V+K LMRRHVRNLLS+L
Sbjct: 450 DKLETVRVFSKLPVSIQQPVWSDQDVTIQEITADPKVETPEKNVAKQLMRRHVRNLLSLL 509

Query: 363 PPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAYT 542
            P+E+++I LR+GI+  E+KSL++IG +F +SKER+RQ+E++AL+KL+NC  +QGLE Y 
Sbjct: 510 NPRERQVINLRFGIQGRERKSLSEIGGMFNVSKERIRQVESKALEKLKNCTQTQGLEVYA 569

Query: 543 NLL 551
            LL
Sbjct: 570 ELL 572


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 548

 Score =  241 bits (616), Expect = 1e-61
 Identities = 119/184 (64%), Positives = 150/184 (81%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGFT 179
           AYWWIRQ+VRKAIF HS++IRLPENVY+ L +V  AK   I EG H PT EE+AK++G T
Sbjct: 364 AYWWIRQTVRKAIFQHSRTIRLPENVYHTLGKVSEAKRSYIMEGNHNPTKEELAKRIGIT 423

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
             +LERLL   + PLSMQ+ +W+DQ TTFQ +TAD +VE PE  V+K LMR+HV +LL++
Sbjct: 424 TVRLERLLYMARMPLSMQQTVWADQETTFQEITADIEVEIPELCVAKQLMRKHVLSLLNI 483

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L P+E++IIRLRYGIEDG++KSL++IG VFGLSKERVRQLE+RAL KL+ CL+S GLEAY
Sbjct: 484 LNPRERKIIRLRYGIEDGKKKSLSEIGSVFGLSKERVRQLESRALYKLKQCLASHGLEAY 543

Query: 540 TNLL 551
            +LL
Sbjct: 544 ADLL 547


>ref|XP_006588793.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Glycine max]
          Length = 575

 Score =  236 bits (603), Expect = 5e-60
 Identities = 115/184 (62%), Positives = 149/184 (80%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGH-QPTNEEIAKQVGFT 179
           A+WWIRQ++RKA+F HS++IRLPE V+  L +V  AK++ I+EG+  PT EE+A++VG T
Sbjct: 391 AFWWIRQAIRKAVFRHSRTIRLPEKVFILLGKVMEAKKLYIQEGNLHPTKEELARRVGVT 450

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V K+++LL + + P+SMQ+ +W+DQ TTFQ +TADP VE  +  V K LMRRHV N+LSV
Sbjct: 451 VEKIDKLLFSARIPISMQQTVWADQNTTFQEITADPTVEATDVTVEKQLMRRHVLNVLSV 510

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKE+RIIRLRYG EDGEQKSL++IGD+FGLSKERVRQLE RAL KL+ CL  QGL+AY
Sbjct: 511 LHPKERRIIRLRYGFEDGEQKSLSEIGDIFGLSKERVRQLEIRALYKLKKCLVKQGLDAY 570

Query: 540 TNLL 551
            +LL
Sbjct: 571 VDLL 574


>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
           gi|462400636|gb|EMJ06193.1| hypothetical protein
           PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  236 bits (601), Expect = 8e-60
 Identities = 120/184 (65%), Positives = 148/184 (80%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGFT 179
           AYWWIRQ+VRKAIF HS++IRLPENVY+ L +V  AK+  I+EG H P  EE+A++VG T
Sbjct: 384 AYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEAKKSCIQEGNHNPNKEELARRVGIT 443

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V KLE+LL  T+ PLSMQ+P+W+DQ TTFQ VTAD  VE P+  V+K LMR+HVR+LLS+
Sbjct: 444 VEKLEKLLYATRMPLSMQQPVWADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSI 503

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L  +E+ IIRLRYGIEDG+Q+SL++IG +FGLSKERVRQLE+RA  KLR  L SQGL AY
Sbjct: 504 LNLREREIIRLRYGIEDGKQRSLSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAY 563

Query: 540 TNLL 551
             LL
Sbjct: 564 GPLL 567


>ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Glycine
           max]
          Length = 574

 Score =  235 bits (600), Expect = 1e-59
 Identities = 113/184 (61%), Positives = 149/184 (80%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGH-QPTNEEIAKQVGFT 179
           A+WWIRQ++RKA+F HS++IRLPE V+  L +V  AK++ I+EG+  PT EE+A++VG T
Sbjct: 390 AFWWIRQAIRKAVFRHSRTIRLPEKVFILLGKVMEAKKLYIQEGNLHPTKEELARRVGVT 449

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V K+++LL + + P+SMQ+ +W+DQ TTFQ +TADP VE  +  V K LMR+HV N+LS+
Sbjct: 450 VEKIDKLLFSARIPISMQQTVWADQNTTFQEITADPTVEATDVSVEKQLMRQHVLNVLSI 509

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKE+RIIRLRYG EDGEQKSL++IGD+FGLSKERVRQLE RAL KL+ CL  QGL+AY
Sbjct: 510 LHPKERRIIRLRYGFEDGEQKSLSEIGDIFGLSKERVRQLEIRALYKLKKCLVKQGLDAY 569

Query: 540 TNLL 551
            +LL
Sbjct: 570 VDLL 573


>ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Cucumis sativus] gi|449482444|ref|XP_004156283.1|
           PREDICTED: RNA polymerase sigma factor sigF,
           chloroplastic-like [Cucumis sativus]
          Length = 562

 Score =  235 bits (599), Expect = 1e-59
 Identities = 110/185 (59%), Positives = 149/185 (80%), Gaps = 1/185 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGFT 179
           AYWWIR S+ KAIF HS++IRLPENVY  L +V  AK   ++ G ++P+ EE+A +VG T
Sbjct: 378 AYWWIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGIT 437

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V + ++L+  ++ P S+Q+P+W+DQ TTFQ +TAD +V+TP+  V ++LMRRH+RNLLS+
Sbjct: 438 VERFDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSI 497

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKE+RIIRLR+GIEDG +K+L +IG++FGLSKERVRQLENRAL KL+ C +SQGL AY
Sbjct: 498 LSPKERRIIRLRFGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAY 557

Query: 540 TNLLT 554
            +LLT
Sbjct: 558 ADLLT 562


>gb|AFK38759.1| unknown [Lotus japonicus]
          Length = 311

 Score =  234 bits (598), Expect = 2e-59
 Identities = 114/184 (61%), Positives = 148/184 (80%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGH-QPTNEEIAKQVGFT 179
           AYWWIRQ++R+A+F HS++IRLPENVY  L ++  AK+   +EG+  PT EE+A+++G T
Sbjct: 127 AYWWIRQTIRRALFLHSRTIRLPENVYTLLGKLIEAKKFYNREGNVHPTKEELARKIGVT 186

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V KLE LL   + PLSMQ+ +W+DQ TT+Q +TAD  +ETP+  V+K LMRRH RNLL  
Sbjct: 187 VDKLEILLSAARIPLSMQQTVWTDQDTTYQEITADTAIETPDVYVAKQLMRRHARNLLHT 246

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L P+E+RIIRLR+GIEDG +KSL++IG VFGLSKERVRQLE+RALDKL+ CL+S GL+AY
Sbjct: 247 LNPRERRIIRLRFGIEDGYEKSLSEIGTVFGLSKERVRQLESRALDKLKQCLASHGLDAY 306

Query: 540 TNLL 551
            NLL
Sbjct: 307 ANLL 310


>ref|XP_007162766.1| hypothetical protein PHAVU_001G178600g [Phaseolus vulgaris]
           gi|561036230|gb|ESW34760.1| hypothetical protein
           PHAVU_001G178600g [Phaseolus vulgaris]
          Length = 550

 Score =  234 bits (597), Expect = 2e-59
 Identities = 112/184 (60%), Positives = 150/184 (81%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGH-QPTNEEIAKQVGFT 179
           AYWWIR S+R+AIF HS++IR+PEN+Y  L +V  AK+  I+EG+  P+ EE+A++VG T
Sbjct: 366 AYWWIRHSIRRAIFLHSRTIRVPENLYRLLGKVLEAKKSFIQEGNIHPSKEELARRVGIT 425

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V KLE LL T++ P+SMQ+ +W+DQ TTFQ +TAD  +E P+  VSK LMRRHV NLL++
Sbjct: 426 VDKLENLLFTSRNPISMQQSVWADQETTFQEITADSAIEIPDVCVSKQLMRRHVHNLLNM 485

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKEK I+RLR+GIEDG++K+L+ IG VFGL+KERVRQLE+RAL KL++CL SQGL++Y
Sbjct: 486 LSPKEKSILRLRFGIEDGKEKTLSDIGKVFGLTKERVRQLESRALSKLKDCLESQGLDSY 545

Query: 540 TNLL 551
            +LL
Sbjct: 546 IDLL 549


>ref|XP_007144359.1| hypothetical protein PHAVU_007G149600g [Phaseolus vulgaris]
           gi|561017549|gb|ESW16353.1| hypothetical protein
           PHAVU_007G149600g [Phaseolus vulgaris]
          Length = 582

 Score =  234 bits (597), Expect = 2e-59
 Identities = 111/184 (60%), Positives = 148/184 (80%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGH-QPTNEEIAKQVGFT 179
           A+WWIRQ++RKA+F HS++IRLPE VY  L ++  AK++ I+EG+  PT EE+A++VG T
Sbjct: 398 AFWWIRQAIRKAVFRHSRTIRLPEKVYIQLGKIMEAKKLYIQEGNLHPTKEELARRVGIT 457

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V K+++LL   + P+SMQ+ +W+DQ TTFQ +TADP VE  +  V K LMRRHV N+L++
Sbjct: 458 VEKIDKLLYAARIPISMQQTVWADQDTTFQEITADPTVEATDLSVEKQLMRRHVLNVLTI 517

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKE++IIRLRYG EDGEQ+SL++IGD+FGLSKERVRQLE RAL KL+ CL  QGL+AY
Sbjct: 518 LRPKERKIIRLRYGFEDGEQRSLSEIGDIFGLSKERVRQLEIRALYKLKKCLVKQGLDAY 577

Query: 540 TNLL 551
            +LL
Sbjct: 578 VDLL 581


>ref|XP_006604578.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Glycine max]
          Length = 554

 Score =  234 bits (596), Expect = 3e-59
 Identities = 114/184 (61%), Positives = 148/184 (80%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGH-QPTNEEIAKQVGFT 179
           AYWWIR +VRKAIF HS++IRLPEN+Y  L +V  AK+  I+EG+  PT EE+A++VG T
Sbjct: 370 AYWWIRHAVRKAIFLHSRTIRLPENLYTLLGKVIEAKKSYIQEGNLHPTKEELARKVGIT 429

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           + K++ LL  ++ P+SMQ+ +W+DQ TTFQ +TAD  +E P+  VSK LMR HV NLL++
Sbjct: 430 IEKMDNLLFASRNPISMQQTVWADQDTTFQEITADSAIEIPDVTVSKQLMRMHVHNLLNI 489

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKE+ IIRLR+GIEDGE+K+L+ IG VFGL+KERVRQLE+RAL KLR CL SQGL+AY
Sbjct: 490 LSPKERGIIRLRFGIEDGEEKTLSDIGKVFGLTKERVRQLESRALLKLRQCLESQGLDAY 549

Query: 540 TNLL 551
           T+LL
Sbjct: 550 TDLL 553


>ref|XP_003625673.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
           gi|355500688|gb|AES81891.1| RNA polymerase sigma factor
           rpoD [Medicago truncatula]
          Length = 557

 Score =  231 bits (590), Expect = 2e-58
 Identities = 111/184 (60%), Positives = 146/184 (79%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGH-QPTNEEIAKQVGFT 179
           AYWWIRQ++R+A+F HSK+IRLPEN Y  L ++  AK+  IKEG+  PT EEIAK+VG T
Sbjct: 373 AYWWIRQTIRRALFLHSKTIRLPENFYALLGKIAEAKKSYIKEGNLHPTKEEIAKRVGIT 432

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V +LE LL +T+TPLSM+R +W+D  TTFQ +TAD  +E P   V+K LMR HVRNLL +
Sbjct: 433 VDRLEMLLFSTRTPLSMERAVWADSDTTFQEITADSSIEIPNVCVAKQLMRSHVRNLLGI 492

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           LPPKE++++RLR+GIEDG +KSL +IG V G+ KERVRQLE++AL+KL+ CL SQ L+AY
Sbjct: 493 LPPKERKVLRLRFGIEDGYEKSLTEIGKVLGVCKERVRQLESQALNKLKQCLVSQQLDAY 552

Query: 540 TNLL 551
            +L+
Sbjct: 553 VDLI 556


>ref|XP_003625657.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
           gi|355500672|gb|AES81875.1| RNA polymerase sigma factor
           rpoD [Medicago truncatula]
          Length = 365

 Score =  231 bits (590), Expect = 2e-58
 Identities = 111/184 (60%), Positives = 146/184 (79%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGH-QPTNEEIAKQVGFT 179
           AYWWIRQ++R+A+F HSK+IRLPEN Y  L ++  AK+  IKEG+  PT EEIAK+VG T
Sbjct: 181 AYWWIRQTIRRALFLHSKTIRLPENFYALLGKIAEAKKSYIKEGNLHPTKEEIAKRVGIT 240

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V +LE LL +T+TPLSM+R +W+D  TTFQ +TAD  +E P   V+K LMR HVRNLL +
Sbjct: 241 VDRLEMLLFSTRTPLSMERAVWADSDTTFQEITADSSIEIPNVCVAKQLMRSHVRNLLGI 300

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           LPPKE++++RLR+GIEDG +KSL +IG V G+ KERVRQLE++AL+KL+ CL SQ L+AY
Sbjct: 301 LPPKERKVLRLRFGIEDGYEKSLTEIGKVLGVCKERVRQLESQALNKLKQCLVSQQLDAY 360

Query: 540 TNLL 551
            +L+
Sbjct: 361 VDLI 364


>ref|XP_006354351.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Solanum tuberosum]
          Length = 562

 Score =  231 bits (589), Expect = 2e-58
 Identities = 116/184 (63%), Positives = 147/184 (79%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQ-PTNEEIAKQVGFT 179
           AYWWIRQSVRKAIF HS++IRLPENVY  L +VK+AK+  I++G++ PT E+IA   G +
Sbjct: 378 AYWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKKECIQQGNRYPTKEDIASCAGMS 437

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V +L+ LL   +TPLSMQ+ +WSDQ TTFQ +TAD  +E PE  VSK LMRRH+R LL+V
Sbjct: 438 VERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGLLNV 497

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKE++IIRLR+GI DG+ KSL++IG VFGLSKERVRQLE RAL KL+  L+  GL+AY
Sbjct: 498 LSPKERKIIRLRFGIGDGKPKSLSEIGTVFGLSKERVRQLETRALYKLKQNLNKHGLDAY 557

Query: 540 TNLL 551
           ++LL
Sbjct: 558 SDLL 561


>ref|XP_004246643.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Solanum lycopersicum]
          Length = 563

 Score =  231 bits (588), Expect = 3e-58
 Identities = 116/184 (63%), Positives = 146/184 (79%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEGHQ-PTNEEIAKQVGFT 179
           AYWWIRQSVRKAIF HS++IRLPENVY  L +VK+AK   I++G++ PT E+IA   G +
Sbjct: 379 AYWWIRQSVRKAIFQHSRTIRLPENVYALLSKVKDAKRECIRQGNRHPTKEDIASCAGMS 438

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
           V +L+ LL   +TPLSMQ+ +WSDQ TTFQ +TAD  +E PE  VSK LMRRH+R LL+V
Sbjct: 439 VERLQNLLSNVRTPLSMQQSVWSDQDTTFQEITADNAIEAPELSVSKQLMRRHIRGLLNV 498

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKE++IIRLR+GI DG+ KSL++IG VFGLSKERVRQLE RAL KL+  L+  GL+AY
Sbjct: 499 LSPKERKIIRLRFGIGDGKPKSLSEIGAVFGLSKERVRQLETRALYKLKQNLNKHGLDAY 558

Query: 540 TNLL 551
           ++LL
Sbjct: 559 SDLL 562


>ref|XP_006410875.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
           gi|557112044|gb|ESQ52328.1| hypothetical protein
           EUTSA_v10016472mg [Eutrema salsugineum]
          Length = 546

 Score =  229 bits (585), Expect = 6e-58
 Identities = 111/184 (60%), Positives = 148/184 (80%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGFT 179
           AYWWIRQS+RK+IF +S++IRLPENVY  L +V  A++  I++G ++P+ E++A  VG +
Sbjct: 362 AYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCIQDGNYRPSKEQLASHVGVS 421

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
             KL++LL  T+TPLSMQ+PIWSDQ TTFQ VT D  +ETP   V K LMR HVRNLL+V
Sbjct: 422 TEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEVTPDSGIETPSMSVGKQLMRNHVRNLLNV 481

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKEKRII+LR+GI+ G+Q+SL++IG+++GLSKERVRQLE+RAL +L+  +SS GL AY
Sbjct: 482 LSPKEKRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMSSHGLNAY 541

Query: 540 TNLL 551
            +LL
Sbjct: 542 ADLL 545


>ref|XP_006410876.1| hypothetical protein EUTSA_v10016472mg [Eutrema salsugineum]
           gi|312282671|dbj|BAJ34201.1| unnamed protein product
           [Thellungiella halophila] gi|557112045|gb|ESQ52329.1|
           hypothetical protein EUTSA_v10016472mg [Eutrema
           salsugineum]
          Length = 547

 Score =  229 bits (585), Expect = 6e-58
 Identities = 111/184 (60%), Positives = 148/184 (80%), Gaps = 1/184 (0%)
 Frame = +3

Query: 3   AYWWIRQSVRKAIFHHSKSIRLPENVYNALRQVKNAKEVLIKEG-HQPTNEEIAKQVGFT 179
           AYWWIRQS+RK+IF +S++IRLPENVY  L +V  A++  I++G ++P+ E++A  VG +
Sbjct: 363 AYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCIQDGNYRPSKEQLASHVGVS 422

Query: 180 VGKLERLLITTKTPLSMQRPIWSDQATTFQAVTADPKVETPEQGVSKDLMRRHVRNLLSV 359
             KL++LL  T+TPLSMQ+PIWSDQ TTFQ VT D  +ETP   V K LMR HVRNLL+V
Sbjct: 423 TEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEVTPDSGIETPSMSVGKQLMRNHVRNLLNV 482

Query: 360 LPPKEKRIIRLRYGIEDGEQKSLAQIGDVFGLSKERVRQLENRALDKLRNCLSSQGLEAY 539
           L PKEKRII+LR+GI+ G+Q+SL++IG+++GLSKERVRQLE+RAL +L+  +SS GL AY
Sbjct: 483 LSPKEKRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMSSHGLNAY 542

Query: 540 TNLL 551
            +LL
Sbjct: 543 ADLL 546