BLASTX nr result

ID: Papaver27_contig00033210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00033210
         (602 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    46   4e-07
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    46   4e-07
ref|XP_007226707.1| hypothetical protein PRUPE_ppa020120mg [Prun...    38   9e-06

>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
           42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 46.2 bits (108), Expect(2) = 4e-07
 Identities = 17/37 (45%), Positives = 27/37 (72%)
 Frame = +3

Query: 486 KHASWTYFNELSRTVEIPWLVLGDLNFVLTESEKRGG 596
           +H+ WT+F  LS+T   PW+++GD N +L+ +EK GG
Sbjct: 494 RHSLWTHFENLSKTRNDPWILIGDFNEILSNNEKIGG 530



 Score = 33.9 bits (76), Expect(2) = 4e-07
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +1

Query: 331 GTEGGMVLAWSSKISLQLLHSSDNQIDALITDKTRNFDWMLSAVYG 468
           G  GG+ L W   + L  L+  D  ID  I+    N ++ LS VYG
Sbjct: 444 GHSGGLALLWKDSVRLSNLYQDDRHIDVHIS--INNINFYLSRVYG 487


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
           putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 46.2 bits (108), Expect(2) = 4e-07
 Identities = 17/37 (45%), Positives = 27/37 (72%)
 Frame = +3

Query: 486 KHASWTYFNELSRTVEIPWLVLGDLNFVLTESEKRGG 596
           +H+ WT+F  LS+T   PW+++GD N +L+ +EK GG
Sbjct: 474 RHSLWTHFENLSKTRNDPWILIGDFNEILSNNEKIGG 510



 Score = 33.9 bits (76), Expect(2) = 4e-07
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +1

Query: 331 GTEGGMVLAWSSKISLQLLHSSDNQIDALITDKTRNFDWMLSAVYG 468
           G  GG+ L W   + L  L+  D  ID  I+    N ++ LS VYG
Sbjct: 424 GHSGGLALLWKDSVRLSNLYQDDRHIDVHIS--INNINFYLSRVYG 467


>ref|XP_007226707.1| hypothetical protein PRUPE_ppa020120mg [Prunus persica]
           gi|462423643|gb|EMJ27906.1| hypothetical protein
           PRUPE_ppa020120mg [Prunus persica]
          Length = 1011

 Score = 37.7 bits (86), Expect(2) = 9e-06
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = +1

Query: 289 EKLDMIVVYPTGMVGTEGGMVLAWSSKISLQLLHSSDNQIDALITDKTRNFDWMLSAVYG 468
           E+L     +    +G  GG+ L W S+++L +  SS + IDA +     +  W L+  YG
Sbjct: 20  EQLGFDYCFVVDAIGLSGGLCLFWKSELNLAIRSSSTHHIDAEVGGIGDSLHWRLTGFYG 79



 Score = 37.7 bits (86), Expect(2) = 9e-06
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 489 HASWTYFNELSRTVEIPWLVLGDLNFVLTESEKRGG 596
           H SW    +L+    +PW+ +GD N +L  +EK GG
Sbjct: 87  HLSWNLLRDLASESRLPWVCMGDFNELLYANEKEGG 122


Top