BLASTX nr result

ID: Papaver27_contig00032269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00032269
         (678 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299005.1| F-box family protein [Populus trichocarpa] g...    59   1e-06

>ref|XP_002299005.1| F-box family protein [Populus trichocarpa]
           gi|222846263|gb|EEE83810.1| F-box family protein
           [Populus trichocarpa]
          Length = 412

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
 Frame = -3

Query: 505 EDVIAREILSWLPVKCLIKFKSVCKYWCSVIEEDIGFISLHLERSIARPC---LLVSNLI 335
           +D++A EIL+ LP K L++F+ VCK W S+I +   F+ LH  +S+ +PC   LL+S   
Sbjct: 35  QDIVA-EILAKLPAKSLMRFRCVCKTWSSLIRDPF-FVKLHQNQSLNKPCKTGLLMS--- 89

Query: 334 DNRSKYEFRTANLVFGDRRAISEAKFHTIRDMEVASSDLMLKPVVGLSGFFGERRDYPGV 155
              +K++   ++ VF D       +  TI    +  S  +L    GL+    ++     +
Sbjct: 90  ---TKHQLFNSHFVFADHEGKQALEEDTI---SIPKSSNVLGIANGLACIVNDKH---RI 140

Query: 154 CIFNLSTWKITPWIVSNLLTDVRREDLEASNKISMATCTLGYDPISKEHKV 2
            ++NLST + T   +     ++R +D            + G+DP++ E+K+
Sbjct: 141 SVYNLSTREST--TIPPPPQEIRIQD----------RLSFGFDPLANEYKI 179


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