BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00031112
         (794 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...    59   1e-13
ref|XP_004292479.1| PREDICTED: putative ribonuclease H protein A...    52   1e-11
ref|XP_007044601.1| Uncharacterized protein TCM_010295 [Theobrom...    61   1e-11
gb|EEE59647.1| hypothetical protein OsJ_12023 [Oryza sativa Japo...    56   2e-11
gb|AAU89136.1| F-box domain containing protein [Oryza sativa Jap...    56   2e-11
gb|EEC75888.1| hypothetical protein OsI_12930 [Oryza sativa Indi...    56   2e-11
ref|XP_004301145.1| PREDICTED: putative ribonuclease H protein A...    53   2e-11
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ...    55   4e-11
gb|AAP54617.2| retrotransposon protein, putative, unclassified [...    55   4e-11
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi...    62   5e-11
ref|XP_004301407.1| PREDICTED: putative ribonuclease H protein A...    55   1e-10
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta...    57   2e-10
ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616...    72   3e-10
ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, part...    51   3e-10
ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prun...    47   4e-10
ref|XP_007219414.1| hypothetical protein PRUPE_ppa021915mg, part...    55   4e-10
emb|CAN78294.1| hypothetical protein VITISV_035517 [Vitis vinifera]    53   4e-10
gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          53   5e-10
ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein A...    54   7e-10
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    61   1e-09

>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score = 58.9 bits (141), Expect(2) = 1e-13
 Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
 Frame = -2

Query: 760 WNLNTLNAPFLKNVVDKIRKIRLPMIG-ND*IRWSGTKNGVFTVKSAYNILLEESQSRNS 584
           WN + L     +N +  IR IR  + G ND I W  T +G ++VKS Y++L + SQ +++
Sbjct: 425 WNEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYHLLRKLSQQQHA 484

Query: 583 NNHS------QFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLSR 464
           +  S      Q  +  +WK   PPKI H   +  HN +PT   L R
Sbjct: 485 SLPSPNEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKR 530



 Score = 44.3 bits (103), Expect(2) = 1e-13
 Identities = 29/102 (28%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
 Frame = -1

Query: 416 ETMHYLFIGCPVTLSIWNAIDASITV--TCKNDNFIEWLQNILKSNQFFVEDVQKKVRLL 243
           E +++L   C V+  IW      +    +  +++F + L++I K NQ      +K V L 
Sbjct: 547 EDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLESIQKLNQ----SARKDVSLF 602

Query: 242 SCIFWHIWKLRCLVVFDNC*FRPTEYIHSIKIFVSEWENSLN 117
             I W IWK+R  ++F+N  +   + I    I   +W+ SLN
Sbjct: 603 PFIGWRIWKMRNDLIFNNKRWSIPDSIQKALIDQQQWKESLN 644


>ref|XP_004292479.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 473

 Score = 51.6 bits (122), Expect(2) = 1e-11
 Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 9/133 (6%)
 Frame = -2

Query: 793 VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKIRLPMI-GND*IRWSGTKNGVFTVKSAYN 617
           V ++ D  ++ WNL+++      +  +KI  I +    G D I W   K GV+TV S Y 
Sbjct: 166 VFEIIDWPSKTWNLDSILHLIQPSEANKILLIPIGSHDGEDRIIWPWNKRGVYTVSSRYT 225

Query: 616 ILLEESQSRN----SNNHS--QFPWQRLWKVKIPPKIH--HLLQKCLHNYVPTRDKLSRF 461
            +  + +  N    S++HS     W++LWK++ PPK++    L K +   + T   +  F
Sbjct: 226 WINSKCRVINPPKCSSSHSVETAVWRQLWKIRAPPKVNFFFFLWKAISGAIATFKNM--F 283

Query: 460 VNNIPGTYPLCEI 422
           +  +  T PLC I
Sbjct: 284 IRKLAST-PLCPI 295



 Score = 44.7 bits (104), Expect(2) = 1e-11
 Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
 Frame = -1

Query: 416 ETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFIE-WLQNILKSNQFFVEDVQKKVRLLS 240
           E+  ++ + CP   ++W      + +   + + ++ WL+ I K++    +D    + ++ 
Sbjct: 301 ESNEHMLLLCPWAEAVWFGSSLGLKINKNHISTLDSWLKEICKAHNS--QDRIWVLTMVG 358

Query: 239 CIFWHIWKLRCLVVFDNC*FRPTEYIH-SIKIFVSEWENSLNNTPD-SNQVMHENRWTLP 66
           CI W IWK RC  V+D     P   I  S+ + +  W  +  + P   ++     RW  P
Sbjct: 359 CICWSIWKSRCSFVYDRRPISPPAVIQSSLNLALEFWSANRKDPPSLESEARSRKRWQPP 418


>ref|XP_007044601.1| Uncharacterized protein TCM_010295 [Theobroma cacao]
           gi|508708536|gb|EOY00433.1| Uncharacterized protein
           TCM_010295 [Theobroma cacao]
          Length = 290

 Score = 61.2 bits (147), Expect(2) = 1e-11
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
 Frame = -2

Query: 664 WSGTKNGVFTVKSAYNIL---LEESQSRNSNNHSQFPWQRLWKVKIPPKIHHLLQKCLHN 494
           W  TKNG +TVKS Y  L   L+   + +S+    + W++LW   +P K    + K +H+
Sbjct: 25  WFDTKNGSYTVKSGYKFLGSTLDNVTNTSSSVQGNWLWKKLWHCAVPRKTMLFMWKVIHD 84

Query: 493 YVPTRDKLSRFVNNIPGTYPLCEIMLKPCIIC 398
            +PTR +L +   NI    PLCEI ++    C
Sbjct: 85  ILPTRSELIKRGVNIELMCPLCEIEVETAFHC 116



 Score = 35.0 bits (79), Expect(2) = 1e-11
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = -1

Query: 419 VETMHYLFIGCPVTLSIWNAIDASIT-VTCKNDNFIEWLQNILKSNQFFVEDVQKKVRLL 243
           VET  +    C  +  +W         ++  +D+ I+WLQ + +         + +    
Sbjct: 110 VETAFHCLCNCQFSRLVWLTTKCGFRDISNFHDSIIDWLQGVFEVLN------KDETEEF 163

Query: 242 SCIFWHIWKLRCLVVFD 192
            C+ W IWK R +VVF+
Sbjct: 164 ICLLWAIWKTRNVVVFN 180


>gb|EEE59647.1| hypothetical protein OsJ_12023 [Oryza sativa Japonica Group]
          Length = 1145

 Score = 56.2 bits (134), Expect(2) = 2e-11
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
 Frame = -2

Query: 793  VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKIRLPMIGN-D*IRWSGTKNGVFTVKSAYN 617
            VS L +ED R W+ + + + F  ++  +I +I +   G+ D   W   K G+++V+SAYN
Sbjct: 738  VSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGDADFASWPHEKLGLYSVRSAYN 797

Query: 616  ILLEESQSRNSNN----------HSQFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLS 467
            ++  E+   + +N           SQ  W+ LWK+  P K+  +L +  H  + T  +L 
Sbjct: 798  MVRSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAPGKMKIILWRAAHECLATGFQLP 857

Query: 466  RFVNNIPGT 440
            R   +IP T
Sbjct: 858  R--RHIPST 864



 Score = 39.7 bits (91), Expect(2) = 2e-11
 Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
 Frame = -1

Query: 425  NHVETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFI---EWLQNILKSNQFFVEDVQKK 255
            N  +T+ ++F+ CP    IW  I     V    + F     W+ + LK            
Sbjct: 871  NRDDTVEHVFLFCPFAAQIWEEIKRKCAVKLGRNGFSTMRHWIFDFLKRGSSHTN----- 925

Query: 254  VRLLSCIFWHIWKLRCLVVFDNC*FRPTEYIHSIKIFVSEWENSLNNTPDSNQVMHENRW 75
              LL+  FWHIW+ R     +N    P   +  I  +V         T D  +   EN  
Sbjct: 926  -TLLAVTFWHIWEARNNTKNNNGTVHPQRVVIKILSYVDMILKHNTKTVDGQR--GENTQ 982

Query: 74   TLPK 63
             +P+
Sbjct: 983  AIPR 986


>gb|AAU89136.1| F-box domain containing protein [Oryza sativa Japonica Group]
          Length = 855

 Score = 56.2 bits (134), Expect(2) = 2e-11
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
 Frame = -2

Query: 793 VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKIRLPMIGN-D*IRWSGTKNGVFTVKSAYN 617
           VS L +ED R W+ + + + F  ++  +I +I +   G+ D   W   K G+++V+SAYN
Sbjct: 448 VSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGDADFASWPHEKLGLYSVRSAYN 507

Query: 616 ILLEESQSRNSNN----------HSQFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLS 467
           ++  E+   + +N           SQ  W+ LWK+  P K+  +L +  H  + T  +L 
Sbjct: 508 MVRSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAPGKMKIILWRAAHECLATGFQLP 567

Query: 466 RFVNNIPGT 440
           R   +IP T
Sbjct: 568 R--RHIPST 574



 Score = 39.7 bits (91), Expect(2) = 2e-11
 Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
 Frame = -1

Query: 425 NHVETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFI---EWLQNILKSNQFFVEDVQKK 255
           N  +T+ ++F+ CP    IW  I     V    + F     W+ + LK            
Sbjct: 581 NRDDTVEHVFLFCPFAAQIWEEIKRKCAVKLGRNGFSTMRHWIFDFLKRGSSHTN----- 635

Query: 254 VRLLSCIFWHIWKLRCLVVFDNC*FRPTEYIHSIKIFVSEWENSLNNTPDSNQVMHENRW 75
             LL+  FWHIW+ R     +N    P   +  I  +V         T D  +   EN  
Sbjct: 636 -TLLAVTFWHIWEARNNTKNNNGTVHPQRVVIKILSYVDMILKHNTKTVDGQR--GENTQ 692

Query: 74  TLPK 63
            +P+
Sbjct: 693 AIPR 696


>gb|EEC75888.1| hypothetical protein OsI_12930 [Oryza sativa Indica Group]
          Length = 834

 Score = 56.2 bits (134), Expect(2) = 2e-11
 Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
 Frame = -2

Query: 793 VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKIRLPMIGN-D*IRWSGTKNGVFTVKSAYN 617
           VS L +ED R W+ + + + F  ++  +I +I +   G+ D   W   K G+++V+SAYN
Sbjct: 427 VSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGDADFASWPHEKLGLYSVRSAYN 486

Query: 616 ILLEESQSRNSNN----------HSQFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLS 467
           ++  E+   + +N           SQ  W+ LWK+  P K+  +L +  H  + T  +L 
Sbjct: 487 MVRSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAPGKMKIILWRAAHECLATGFQLP 546

Query: 466 RFVNNIPGT 440
           R   +IP T
Sbjct: 547 R--RHIPST 553



 Score = 39.7 bits (91), Expect(2) = 2e-11
 Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
 Frame = -1

Query: 425 NHVETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFI---EWLQNILKSNQFFVEDVQKK 255
           N  +T+ ++F+ CP    IW  I     V    + F     W+ + LK            
Sbjct: 560 NRDDTVEHVFLFCPFAAQIWEEIKRKCAVKLGRNGFSTMRHWIFDFLKRGSSHTN----- 614

Query: 254 VRLLSCIFWHIWKLRCLVVFDNC*FRPTEYIHSIKIFVSEWENSLNNTPDSNQVMHENRW 75
             LL+  FWHIW+ R     +N    P   +  I  +V         T D  +   EN  
Sbjct: 615 -TLLAVTFWHIWEARNNTKNNNGTVHPQRVVIKILSYVDMILKHNTKTVDGQR--GENTQ 671

Query: 74  TLPK 63
            +P+
Sbjct: 672 AIPR 675


>ref|XP_004301145.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 411

 Score = 52.8 bits (125), Expect(2) = 2e-11
 Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
 Frame = -2

Query: 760 WNLNTLNAPFLKNVVDKIRKIR--LPMIGND*IRWSGTKNGVFTVKSAYNILLEESQSRN 587
           WN+  L +    +VV +I  +     + G+D + W+ T NG F+VKSAYN   + +   N
Sbjct: 14  WNIPLLKSVLPDHVVMQIISVPSGFGVSGHDKLIWNATANGKFSVKSAYNSFFDSAGVSN 73

Query: 586 SNNHSQFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLSRFVNNIPGTYPLCE 425
                   W  LWK+  PPK+   +   LH  + T  +  R   +   + P+C+
Sbjct: 74  P------LWTHLWKLNCPPKLKTFMWYVLHQKILTNVQRVRRGFSTIASCPICK 121



 Score = 42.7 bits (99), Expect(2) = 2e-11
 Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 5/131 (3%)
 Frame = -1

Query: 425 NHVETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFIEWLQNILKSNQFFVEDVQKK--- 255
           N  ET+ +L   CP + +IWN+I +  ++T  N   ++W  N     QF    V K    
Sbjct: 122 NADETLLHLLRDCPRSQAIWNSILSPGSIT--NSFSLDW--NGWICAQFHCHVVIKNNIQ 177

Query: 254 -VRLLSCIFWHIWKLRCLVVFDNC*FRPTEYIHSIKIFVSEWENSLNNTPDSNQVMHEN- 81
              L   + W IWK R  V+FD     P      I  +V EW ++ +     +   +   
Sbjct: 178 WCNLFVFVCWFIWKWRNKVIFDPAFILPACPNKVIWNYVDEWSSAQSKASMQSMFSYTMF 237

Query: 80  RWTLPKENDFK 48
            W  P EN +K
Sbjct: 238 SWCKPPENFYK 248


>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
            Japonica Group]
          Length = 1382

 Score = 54.7 bits (130), Expect(2) = 4e-11
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
 Frame = -2

Query: 793  VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKIRLPMIGN-D*IRWSGTKNGVFTVKSAYN 617
            VS L +ED R W+ + + + F  ++  +I +I +   G+ D   W   K G+++V+SAYN
Sbjct: 975  VSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYN 1034

Query: 616  ILLEESQSRNSNN----------HSQFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLS 467
            +   E+   + +N           SQ  W+ LWK+  P K+   L +  H  + T  +L 
Sbjct: 1035 LARSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLR 1094

Query: 466  RFVNNIPGT 440
            R   +IP T
Sbjct: 1095 R--RHIPST 1101



 Score = 40.0 bits (92), Expect(2) = 4e-11
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = -1

Query: 425  NHVETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFI---EWLQNILKSNQFFVEDVQKK 255
            N  +T+ ++F+ CP    IW  I     V    + F    +W+ + LK            
Sbjct: 1108 NRDDTVEHVFLFCPFAAQIWEEIKGKCAVKLGRNGFSTMRQWIFDFLKRGSSHAN----- 1162

Query: 254  VRLLSCIFWHIWKLR 210
              LL+  FWHIW+ R
Sbjct: 1163 -TLLAVTFWHIWEAR 1176


>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
            protein OsJ_32156 [Oryza sativa Japonica Group]
          Length = 1339

 Score = 54.7 bits (130), Expect(2) = 4e-11
 Identities = 38/129 (29%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
 Frame = -2

Query: 793  VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKIRLPMIGN-D*IRWSGTKNGVFTVKSAYN 617
            VS L +ED R W+ + + + F  ++  +I +I +   G+ D   W   K G+++V+SAYN
Sbjct: 932  VSCLMNEDARCWDGDLIRSLFPVDIAKEILQIPISRHGDADFASWPHDKLGLYSVRSAYN 991

Query: 616  ILLEESQSRNSNN----------HSQFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLS 467
            +   E+   + +N           SQ  W+ LWK+  P K+   L +  H  + T  +L 
Sbjct: 992  LARSEAFFADQSNSGRGMASRLLESQKDWKGLWKINAPGKMKITLWRAAHECLATGFQLR 1051

Query: 466  RFVNNIPGT 440
            R   +IP T
Sbjct: 1052 R--RHIPST 1058



 Score = 40.0 bits (92), Expect(2) = 4e-11
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 3/75 (4%)
 Frame = -1

Query: 425  NHVETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFI---EWLQNILKSNQFFVEDVQKK 255
            N  +T+ ++F+ CP    IW  I     V    + F    +W+ + LK            
Sbjct: 1065 NRDDTVEHVFLFCPFAAQIWEEIKGKCAVKLGRNGFSTMRQWIFDFLKRGSSHAN----- 1119

Query: 254  VRLLSCIFWHIWKLR 210
              LL+  FWHIW+ R
Sbjct: 1120 -TLLAVTFWHIWEAR 1133


>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
            (fragment)
          Length = 1365

 Score = 62.4 bits (150), Expect(2) = 5e-11
 Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
 Frame = -2

Query: 793  VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKIRLPMIGND*IRWSGTKNGVFTVKSAYNI 614
            VSQL D  +RNWNLN L   F    V+ I K R      D   W  + NG+++VK+ Y  
Sbjct: 960  VSQLIDPTSRNWNLNMLRDLFPWKDVEIILKQRPLFFKEDSFCWLHSHNGLYSVKTGYEF 1019

Query: 613  LLEESQSRNSNNHSQFP-----WQRLWKVKIPPKIHHLLQKCLHNYVPTRDKL 470
            L ++   R        P     + ++W +   PKI   L K LH  +P  D+L
Sbjct: 1020 LSKQVHHRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRL 1072



 Score = 32.0 bits (71), Expect(2) = 5e-11
 Identities = 22/124 (17%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
 Frame = -1

Query: 416  ETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFIEWLQNILKSNQFFVEDVQKKVRLLS- 240
            ET++++   CP+   +W     S   +  +++    +  ++   Q    D+   +R +S 
Sbjct: 1091 ETINHILFECPLARQVWAITHLSSAGSEFSNSVYTNMSRLIDLTQ--QNDLPHHLRFVSP 1148

Query: 239  CIFWHIWKLRCLVVFDNC*FRPTEYIHSIKIFVSEWENSLNNTPDSNQVMHENRWTLPKE 60
             I W +WK R  ++F+      T  +        EW ++  +  +  + +   +W  P  
Sbjct: 1149 WILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEWFSAQTHMQNDEKHLKITKWCPPLP 1208

Query: 59   NDFK 48
             + K
Sbjct: 1209 GELK 1212


>ref|XP_004301407.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 612

 Score = 54.7 bits (130), Expect(2) = 1e-10
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 12/120 (10%)
 Frame = -2

Query: 793 VSQLTDEDTRNWNLNTLNAPFLKNVVDKI--RKIRLPMIG----ND*IRWSGTKNGVFTV 632
           VS+L D D+  WNL  +       +V K+  + I + +      +D + WS TKNG +TV
Sbjct: 182 VSKLIDWDSYRWNLQPVCG-----LVPKLDMKAIEMQLFSESDIDDRLIWSPTKNGSYTV 236

Query: 631 KSAYNIL----LEESQSRNSNNHSQFP--WQRLWKVKIPPKIHHLLQKCLHNYVPTRDKL 470
           KS YN+L    L+ S+  + ++H   P     +W ++  PKI H L + ++N + T   L
Sbjct: 237 KSGYNLLHSLNLKPSRQLSHSSHRVHPSVCSTIWSIQTLPKIKHFLWQVVNNAISTYQNL 296



 Score = 38.5 bits (88), Expect(2) = 1e-10
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
 Frame = -1

Query: 416 ETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFIE-WLQNILKSNQFFVEDVQKKVR--- 249
           ET+ +  + CP+    W A   +  +  +   +I+ W++ ILK     +   QKK++   
Sbjct: 315 ETIEHTLLLCPIATCTWFACSLNYKINMQEITYIDRWIEGILK-----LAGPQKKLQDSC 369

Query: 248 --LLSCIFWHIWKLRC 207
              +S I W +WK RC
Sbjct: 370 LIKISFICWELWKCRC 385


>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1319

 Score = 57.0 bits (136), Expect(2) = 2e-10
 Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
 Frame = -2

Query: 793  VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKIRLPMIGND*IRWSGTKNGVFTVKSAYNI 614
            VS L D  TRNWNL  L   F +  V  I   R  +   D   W+GT NG++TVKS Y  
Sbjct: 913  VSHLIDPLTRNWNLKKLTELFHEKDVQLIMHQRPLISSEDSYCWAGTNNGLYTVKSGYER 972

Query: 613  LLEESQSRNSNNHSQFP-----WQRLWKVKIPPKIHHLLQKCLHNYVPTRDKL-SRFVNN 452
               E+          +P     + ++W ++  PKI   + K L   +   D+L SR +  
Sbjct: 973  SSRETFKNLFKEADVYPSVNPLFDKVWSLETVPKIKVFMWKALKGALAVEDRLRSRGIRT 1032

Query: 451  IPG 443
              G
Sbjct: 1033 ADG 1035



 Score = 35.4 bits (80), Expect(2) = 2e-10
 Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
 Frame = -1

Query: 419  VETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFIEWLQNILKSNQFFVEDVQKKVRLLS 240
            +ET+++L   CP    +W         T    +    + ++++++Q F   + + +R +S
Sbjct: 1043 IETINHLLFQCPFARQVWALSLIQAPATGFGTSIFSNINHVIQNSQNF--GIPRHMRTVS 1100

Query: 239  -CIFWHIWKLRCLVVFDNC*FRPTEYIHSIKIFVSEWENSLNNTPDSNQVMHENRWTLPK 63
              + W IWK R   +F       +E +       + W N+   +        E++W  P 
Sbjct: 1101 PWLLWEIWKNRNKTLFQGTGLTSSEIVAKAYEECNLWINAQEKS-SGGVSPSEHKWNPPP 1159

Query: 62   ENDFK 48
              + K
Sbjct: 1160 AGELK 1164


>ref|XP_006476142.1| PREDICTED: uncharacterized protein LOC102616098 [Citrus sinensis]
          Length = 510

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
 Frame = -2

Query: 793 VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKIRLPMIG---ND*IRWSGTKNGVFTVKSA 623
           V+ L     RNW+L+ L   F  N  D+    ++P+     +D   WS    G+FTV+S 
Sbjct: 123 VNNLMTPGQRNWDLDMLVDIF--NDRDQALITQIPLSSRRDDDAWYWSANSRGLFTVRSC 180

Query: 622 YNILLEESQSRNSNNHSQFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLSRFVNNIPG 443
           Y IL   S+  +SN      WQ++WK+K+P K+ H +   + N +PT D L R    +P 
Sbjct: 181 YKILAYLSEPPSSN-----VWQKVWKLKVPAKVKHFIWCAVVNVLPTADNLRRCQVEVPS 235

Query: 442 TYPLC----EIMLKPCIICS 395
             P+C    EI+    + CS
Sbjct: 236 VCPICNAYDEIVAHCLVNCS 255


>ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
           gi|462403441|gb|EMJ08998.1| hypothetical protein
           PRUPE_ppa024472mg, partial [Prunus persica]
          Length = 920

 Score = 50.8 bits (120), Expect(2) = 3e-10
 Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%)
 Frame = -2

Query: 793 VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKIRLPMIGN----D*IRWSGTKNGVFTVKS 626
           VS++ D  TR WN   L A ++    D I+ I    IGN    D I W   K+G+++VKS
Sbjct: 521 VSEILDGQTRTWNTQAL-AQYVSQ--DTIKLINEVPIGNLHREDRIVWPWNKSGLYSVKS 577

Query: 625 AYNILLEESQ-----SRNSNNHSQFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLSR 464
            YN+ +  +      +R+S+   +  W+ +W     PK+   L + +   +PT+  L R
Sbjct: 578 GYNLQVVSASYIGGYNRSSHVIERGVWKDIWASPTLPKVKFFLWRMMVRALPTKLNLYR 636



 Score = 40.8 bits (94), Expect(2) = 3e-10
 Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = -1

Query: 407 HYLFIGCPVTLSIWNAIDASITVTCKN-DNFIEWLQNILKSNQFFVEDVQKKVRLLSCIF 231
           H +F+ CP T ++W     +  V  ++   F  W   +L S  F   +    + L+S I 
Sbjct: 657 HAIFL-CPWTQAVWFGSPLNYRVNPQSITTFDRWFTGLLNSQMFSKSERVWVLSLVSFIS 715

Query: 230 WHIWKLRCLVVFDN 189
           W IWK RC  +F++
Sbjct: 716 WEIWKARCKFLFED 729


>ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
           gi|462406722|gb|EMJ12186.1| hypothetical protein
           PRUPE_ppa021345mg [Prunus persica]
          Length = 759

 Score = 47.4 bits (111), Expect(2) = 4e-10
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
 Frame = -2

Query: 793 VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKI-----RLPMIGND*IRWSGTKNGVFTVK 629
           V  + + +   WNL+ +      +    I ++     RLP    D + W   +NG ++V+
Sbjct: 356 VEAIINRELDEWNLDPIRHAISDSDARAITRVKFGSSRLP----DRLIWPMERNGSYSVR 411

Query: 628 SAYNILLE-ESQSRNSNNHSQFP-----WQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLS 467
           S Y+ L   E + RN    S        W+++WK  +PPKI + L + L N + T   L 
Sbjct: 412 SGYHWLHNTECRRRNPRPSSSMTIDPRLWKQIWKADVPPKIRNFLWRALRNCLATSANLH 471

Query: 466 RFVNNIPGTYPLC 428
           +         PLC
Sbjct: 472 KKKIARSPMCPLC 484



 Score = 43.9 bits (102), Expect(2) = 4e-10
 Identities = 22/105 (20%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
 Frame = -1

Query: 425 NHVETMHYLFIGCPVTLSIWNAIDASITVTCKN-DNFIEWLQNILKSNQFFVEDVQKKVR 249
           +H ET  ++ + CP    +W     ++ +  +   +F +WL N+++  +   ++  + + 
Sbjct: 486 DHPETAEHILLLCPWVEPVWFRCSLNLRINRQAVTSFGQWLGNVIEKGKT-PQERSRCLT 544

Query: 248 LLSCIFWHIWKLRCLVVFDNC*FRPTEYIHSIKIFVSEWENSLNN 114
           +++   W IWK +C  V ++    P    H+  I ++E+  SL++
Sbjct: 545 VIAYFCWQIWKDKCKAVLEHISPSPARTTHAASIAINEFLGSLDH 589


>ref|XP_007219414.1| hypothetical protein PRUPE_ppa021915mg, partial [Prunus persica]
           gi|462415876|gb|EMJ20613.1| hypothetical protein
           PRUPE_ppa021915mg, partial [Prunus persica]
          Length = 509

 Score = 54.7 bits (130), Expect(2) = 4e-10
 Identities = 33/130 (25%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
 Frame = -1

Query: 425 NHVETMHYLFIGCPVTLSIWNAIDASITVTCKN-DNFIEWLQNILKSNQFFVEDVQKKVR 249
           N+ E++ +LF+ CP T ++W     +  V  ++   F  WL ++ + N   + D  + + 
Sbjct: 284 NNEESVEHLFLLCPWTAAVWFGSPLNYRVHNQSITTFDNWLNSMFQLNLTSILDRNRLMT 343

Query: 248 LLSCIFWHIWKLRCLVVFDNC*FRPTEYIHSIKIFVSEW-ENSLNNTPDSNQV--MHENR 78
           ++S I W IWK RC  V +     P   +H      +E+ E +++ +  S+ V  +    
Sbjct: 344 IISFILWEIWKARCKFVIEGRQLHPIHVLHQAMRAANEFIEANVSQSTHSDYVTLISTRA 403

Query: 77  WTLPKENDFK 48
           WT P +   K
Sbjct: 404 WTPPSDGFVK 413



 Score = 36.6 bits (83), Expect(2) = 4e-10
 Identities = 26/81 (32%), Positives = 38/81 (46%)
 Frame = -2

Query: 664 WSGTKNGVFTVKSAYNILLEESQSRNSNNHSQFPWQRLWKVKIPPKIHHLLQKCLHNYVP 485
           W  T NG ++VKS           + S+  S   W+ LWK+K  PKI     + L N + 
Sbjct: 209 WPWTSNGEYSVKSGI-----VGPPQTSHVVSTQVWKGLWKLKSLPKIKFFCWRILSNAIA 263

Query: 484 TRDKLSRFVNNIPGTYPLCEI 422
           T  KL+ F   I  + P+C +
Sbjct: 264 T--KLNLFKRKISQS-PMCPV 281


>emb|CAN78294.1| hypothetical protein VITISV_035517 [Vitis vinifera]
          Length = 350

 Score = 52.8 bits (125), Expect(2) = 4e-10
 Identities = 28/97 (28%), Positives = 48/97 (49%)
 Frame = -2

Query: 754 LNTLNAPFLKNVVDKIRKIRLPMIGND*IRWSGTKNGVFTVKSAYNILLEESQSRNSNNH 575
           LN      ++  + KI+  R+  +  D + W+ +K+GVF+VKS Y+IL            
Sbjct: 126 LNDWEIEMMEQFMLKIQAFRVQRVNEDKMVWTTSKSGVFSVKSLYSIL-------EPGGS 178

Query: 574 SQFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLSR 464
           + FP+  +WK  +PPK+     +     + T D+L R
Sbjct: 179 AMFPYVGIWKASVPPKVAFFAWEASWGKILTLDQLQR 215



 Score = 38.5 bits (88), Expect(2) = 4e-10
 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
 Frame = -1

Query: 416 ETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFIEWLQNILKSNQFFVEDVQKKVRLLS- 240
           ET+ +L + C +T ++WN + +   V       ++    +L  +  FV  ++KK   ++ 
Sbjct: 232 ETVDHLLLHCVMTRTLWNLLFSLFGVEWVLSGTVK--DTLLGWHGAFVGKIRKKAWQMAP 289

Query: 239 -CIFWHIWKLRCLVVFDN 189
            CIFW +WK R  + F N
Sbjct: 290 LCIFWSVWKERNSLAFGN 307


>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 53.1 bits (126), Expect(2) = 5e-10
 Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
 Frame = -2

Query: 760 WNLNTLNAPFLKNVVDKIRKIRLPMIGN-D*IRWSGTKNGVFTVKSAY----NILLEESQ 596
           WN N L   F +  V +I +IRL +    D +RW   K+G +TV+S Y    N    E+ 
Sbjct: 210 WNENLLRLCFEEEDVTRILQIRLSLRRPLDMVRWKFIKDGEYTVRSGYYIDFNCWWHENY 269

Query: 595 SRNSNNHSQFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLSRFVNNIPGTYPLC 428
           +    +  +  W+  W ++ PP+I  LL + + N +  R  L+R    +    P C
Sbjct: 270 ATPLTHAGEERWKTCWGLRCPPRIKTLLWRLIDNNLSVRTNLTRRGIQVDEVCPCC 325



 Score = 37.7 bits (86), Expect(2) = 5e-10
 Identities = 22/74 (29%), Positives = 39/74 (52%)
 Frame = -1

Query: 416 ETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFIEWLQNILKSNQFFVEDVQKKVRLLSC 237
           ET  +LF  CP TL IW  ++  I V   ++N +  + ++L      + D  ++ R  + 
Sbjct: 330 ETAAHLFFCCPYTLDIWKEVNVQIQVE-SSENILLAIDSLLN-----IRDPVEQSRRAAT 383

Query: 236 IFWHIWKLRCLVVF 195
           + W IW++R  +VF
Sbjct: 384 L-WIIWRVRNSIVF 396


>ref|XP_004289445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 719

 Score = 53.5 bits (127), Expect(2) = 7e-10
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
 Frame = -2

Query: 763 NWNLNTLNAPFLKNVVDKIRKIR--LPMIGND*IRWSGTKNGVFTVKSAYNILLEESQSR 590
           +WN++ L +    +VV +I  +     + G+D + W+ T NG F+VKS YN   + +   
Sbjct: 500 SWNISLLKSVLPDHVVMQIISVPSGFGVSGHDKLIWNATANGKFSVKSTYNSFFDSAGVS 559

Query: 589 NSNNHSQFPWQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLSRFVNNIPGTYPLCE 425
           N        W  LWK+  PPK+   +   LH  + T  +  R   +   + P+C+
Sbjct: 560 NP------LWTHLWKLNCPPKLKTFMWSVLHQKILTNVQRVRRGFSTIASCPICK 608



 Score = 37.0 bits (84), Expect(2) = 7e-10
 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 4/102 (3%)
 Frame = -1

Query: 425 NHVETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFIEWLQNILKSNQFFVEDVQKK--- 255
           N  ET+ +L   CP + +IWN+I    ++T  N   ++W  N   S QF    V K    
Sbjct: 609 NADETLLHLLRDCPRSQAIWNSILRPGSIT--NSFSLDW--NGWISAQFHCHVVIKNNIQ 664

Query: 254 -VRLLSCIFWHIWKLRCLVVFDNC*FRPTEYIHSIKIFVSEW 132
              L   + W IWK R  V+FD     P      I   V EW
Sbjct: 665 WCNLFVFVCWFIWKWRNKVIFDPAFILPACPNKVIWNNVDEW 706


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 61.2 bits (147), Expect(2) = 1e-09
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
 Frame = -2

Query: 793  VSQLTDEDTRNWNLNTLNAPFLKNVVDKIRKIRLP-MIGND*IRWSGTKNGVFTVKSAYN 617
            V  L   D R+WN N ++  F  N  + I  +R       D   W  +++G ++VKS Y 
Sbjct: 968  VKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKETRDRFTWEYSRSGHYSVKSGYW 1027

Query: 616  ILLEESQSRNSNNHSQFP-----WQRLWKVKIPPKIHHLLQKCLHNYVPTRDKLS 467
            ++ E    RN+      P     +Q++WK+ +PPKIHH L +C++N +     L+
Sbjct: 1028 VMTEIINQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLA 1082



 Score = 28.5 bits (62), Expect(2) = 1e-09
 Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 7/113 (6%)
 Frame = -1

Query: 425  NHVETMHYLFIGCPVTLSIWNAIDASITVTCKNDNFIEWLQNILKSNQFFVEDVQKKV-- 252
            +H ET+++L   CP     W    A   +        EW +++ + N   V  V K    
Sbjct: 1097 SHGETVNHLLFKCPFARLTW----AISPLPAPPGG--EWAESLFR-NMHHVLSVHKSQPE 1149

Query: 251  -----RLLSCIFWHIWKLRCLVVFDNC*FRPTEYIHSIKIFVSEWENSLNNTP 108
                  L+  I W +WK R  +VF    F   + I      +  W N     P
Sbjct: 1150 ESDHHALIPWILWRLWKNRNDLVFKGREFTAPQVILKATEDMDAWNNRKEPQP 1202