BLASTX nr result

ID: Papaver27_contig00031012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00031012
         (395 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538973.2| PREDICTED: pre-mRNA-processing protein 40C-l...    63   4e-08
ref|XP_006590813.1| PREDICTED: pre-mRNA-processing protein 40C-l...    63   4e-08
ref|XP_006590824.1| PREDICTED: pre-mRNA-processing protein 40C-l...    59   9e-07
ref|XP_006590814.1| PREDICTED: pre-mRNA-processing protein 40C-l...    59   9e-07
ref|XP_006590812.1| PREDICTED: pre-mRNA-processing protein 40C-l...    59   9e-07
ref|XP_002272014.2| PREDICTED: transcription elongation regulato...    57   3e-06
ref|XP_003722449.1| proteophosphoglycan 5 [Leishmania major stra...    56   6e-06

>ref|XP_003538973.2| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1 [Glycine
           max]
          Length = 968

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 48/130 (36%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
 Frame = +3

Query: 9   PAPGGNSSPQKGSSDTKNDAMLESPQTNSLTSPSFSYNAVSNGDSVPGNAEQPST-PDMK 185
           P  G    P   S+ T       +P T    +P F+Y  + N ++  G+++Q ST P MK
Sbjct: 14  PVSGETPLPMASSAHT-------TPSTAPAPAPPFAYGMLQNVNA-SGSSQQSSTHPGMK 65

Query: 186 SNGPGGVASLQPPVQTSTTGPSFSYNIMPQNTAGASSH--HFQSSTNTLSAALQEARTAT 359
           SN       +QPP  +    PSFSYNI PQ+ A  SS+  H QSSTN   +  Q+    +
Sbjct: 66  SNSAVNPMVVQPPGVSLHAAPSFSYNI-PQSGAIFSSNQQHAQSSTNMPDSVAQDVGKLS 124

Query: 360 SASPISQSLP 389
           SAS I  S+P
Sbjct: 125 SASSIPHSVP 134


>ref|XP_006590813.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X2 [Glycine
           max]
          Length = 968

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 48/130 (36%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
 Frame = +3

Query: 9   PAPGGNSSPQKGSSDTKNDAMLESPQTNSLTSPSFSYNAVSNGDSVPGNAEQPST-PDMK 185
           P  G    P   S+ T       +P T    +P F+Y  + N ++  G+++Q ST P MK
Sbjct: 14  PVSGETPLPMASSAHT-------TPSTAPAPAPPFAYGMLQNVNA-SGSSQQSSTHPGMK 65

Query: 186 SNGPGGVASLQPPVQTSTTGPSFSYNIMPQNTAGASSH--HFQSSTNTLSAALQEARTAT 359
           SN       +QPP  +    PSFSYNI PQ+ A  SS+  H QSSTN   +  Q+    +
Sbjct: 66  SNSAVNPMVVQPPGVSLHAAPSFSYNI-PQSGAIFSSNQQHAQSSTNMPDSVAQDVGKLS 124

Query: 360 SASPISQSLP 389
           SAS I  S+P
Sbjct: 125 SASSIPHSVP 134


>ref|XP_006590824.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X2 [Glycine
           max]
          Length = 980

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
 Frame = +3

Query: 102 SPSFSYNAVSNGDSVPGNAEQPST-PDMKSNGPGGVASLQPPVQTSTTGPSFSYNIMPQN 278
           +P F+Y  + N ++  G+++Q ST P MKSN       +QPP  +    PSFSYNI PQ+
Sbjct: 50  APPFAYGMLQNVNA-SGSSQQSSTHPGMKSNSAVNPMVVQPPGVSLHAAPSFSYNI-PQS 107

Query: 279 TAGASSH--HFQSSTNTLSAALQEARTATSASPISQSLP 389
            A  SS+  H QSSTN   +  Q+    +SAS I  S+P
Sbjct: 108 GAIFSSNQQHAQSSTNMPDSVAQDVGKLSSASSIPHSVP 146


>ref|XP_006590814.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X3 [Glycine
           max]
          Length = 850

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
 Frame = +3

Query: 102 SPSFSYNAVSNGDSVPGNAEQPST-PDMKSNGPGGVASLQPPVQTSTTGPSFSYNIMPQN 278
           +P F+Y  + N ++  G+++Q ST P MKSN       +QPP  +    PSFSYNI PQ+
Sbjct: 50  APPFAYGMLQNVNA-SGSSQQSSTHPGMKSNSAVNPMVVQPPGVSLHAAPSFSYNI-PQS 107

Query: 279 TAGASSH--HFQSSTNTLSAALQEARTATSASPISQSLP 389
            A  SS+  H QSSTN   +  Q+    +SAS I  S+P
Sbjct: 108 GAIFSSNQQHAQSSTNMPDSVAQDVGKLSSASSIPHSVP 146


>ref|XP_006590812.1| PREDICTED: pre-mRNA-processing protein 40C-like isoform X1 [Glycine
           max]
          Length = 980

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/99 (41%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
 Frame = +3

Query: 102 SPSFSYNAVSNGDSVPGNAEQPST-PDMKSNGPGGVASLQPPVQTSTTGPSFSYNIMPQN 278
           +P F+Y  + N ++  G+++Q ST P MKSN       +QPP  +    PSFSYNI PQ+
Sbjct: 50  APPFAYGMLQNVNA-SGSSQQSSTHPGMKSNSAVNPMVVQPPGVSLHAAPSFSYNI-PQS 107

Query: 279 TAGASSH--HFQSSTNTLSAALQEARTATSASPISQSLP 389
            A  SS+  H QSSTN   +  Q+    +SAS I  S+P
Sbjct: 108 GAIFSSNQQHAQSSTNMPDSVAQDVGKLSSASSIPHSVP 146


>ref|XP_002272014.2| PREDICTED: transcription elongation regulator 1-like [Vitis
           vinifera] gi|297738259|emb|CBI27460.3| unnamed protein
           product [Vitis vinifera]
          Length = 1046

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 43/170 (25%)
 Frame = +3

Query: 9   PAPGGNSSPQKGSSDTKNDAMLESPQ-------TNSLTSPSFSYNAVSNGDSVPGNAEQ- 164
           PA        +G+S T ++++ ES Q        + L  PSFSY+ + +  +  G ++Q 
Sbjct: 41  PASVATIRTSEGASGTASNSIQESAQGKFVNAPPHVLPGPSFSYSGIPHVTTASGTSQQL 100

Query: 165 PSTPDMKSNGPGGVASLQPPVQ--TSTTGPSFSYNIMPQNTAGASSHHFQSSTNTLS--- 329
           PS   + SN        Q PV   +S++GPSFSYNI  +      S  FQSST+  S   
Sbjct: 101 PSGSVISSNPLASTVVFQTPVPGPSSSSGPSFSYNIAHKGAGFPGSQPFQSSTSIASGPR 160

Query: 330 ------------------------------AALQEARTATSASPISQSLP 389
                                         A  QEA + +SAS +SQS+P
Sbjct: 161 GPTPNAASFSFNGNPQLVQKDQTLKSDNSGAVAQEAGSMSSASHVSQSVP 210


>ref|XP_003722449.1| proteophosphoglycan 5 [Leishmania major strain Friedlin]
             gi|323363677|emb|CBZ12682.1| proteophosphoglycan 5
             [Leishmania major strain Friedlin]
          Length = 17392

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/129 (24%), Positives = 64/129 (49%)
 Frame = +3

Query: 3     AVPAPGGNSSPQKGSSDTKNDAMLESPQTNSLTSPSFSYNAVSNGDSVPGNAEQPSTPDM 182
             + P+   +S+P   SS   + +   +P ++S ++PS S ++  +  S   +A   S P  
Sbjct: 12229 SAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSS 12288

Query: 183   KSNGPGGVASLQPPVQTSTTGPSFSYNIMPQNTAGASSHHFQSSTNTLSAALQEARTATS 362
              S+     +S   P  +S+T PS S +  P +++ A S    S+ ++ S++   A ++++
Sbjct: 12289 SSSSAPSASSSSAPSSSSSTAPSASSSSAPSSSSTAPSASSSSAPSSSSSSAPSASSSSA 12348

Query: 363   ASPISQSLP 389
              S  S S P
Sbjct: 12349 PSSSSSSAP 12357


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