BLASTX nr result
ID: Papaver27_contig00030954
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00030954
(818 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun... 99 3e-32
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 93 7e-31
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 93 7e-31
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme... 100 4e-29
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 89 2e-26
ref|XP_006645606.1| PREDICTED: probable RNA-dependent RNA polyme... 92 5e-26
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 114 4e-23
ref|XP_006645607.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA... 82 2e-22
ref|XP_002455002.1| hypothetical protein SORBIDRAFT_03g002800 [S... 80 2e-22
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 111 3e-22
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 111 3e-22
sp|Q5QMN4.2|RDR4_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 72 7e-21
gb|EEE54053.1| hypothetical protein OsJ_00746 [Oryza sativa Japo... 72 7e-21
ref|NP_001042304.1| Os01g0198000 [Oryza sativa Japonica Group] g... 72 7e-21
gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japo... 77 8e-21
ref|NP_001042303.1| Os01g0197900 [Oryza sativa Japonica Group] g... 77 9e-21
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme... 67 1e-20
sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA ... 77 2e-20
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera] 104 3e-20
ref|XP_004967185.1| PREDICTED: probable RNA-dependent RNA polyme... 72 5e-20
>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
gi|462399806|gb|EMJ05474.1| hypothetical protein
PRUPE_ppa001584mg [Prunus persica]
Length = 798
Score = 99.0 bits (245), Expect(2) = 3e-32
Identities = 63/170 (37%), Positives = 94/170 (55%), Gaps = 1/170 (0%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
D+YY+ALD K G K+V+P +L+ PH+M+ + NSY+STSIL
Sbjct: 604 DLYYEALDAPKKGGKVVVPGELKSNLFPHYME-----------------RVNSYKSTSIL 646
Query: 634 GQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPEDRIAFWTEQHNMYRTEMRHALNNEAVK 455
G I+D V A++ + + EV KLP F+ VPE+ + W E + YR+EM A+ ++
Sbjct: 647 GLIYDTVNAYQA-EDASIKEVKKLPMFDVEVPEECLKKWREHYQHYRSEMSSAMQDD--- 702
Query: 454 DQFADLGSQNNQASAAVYQKYKQILY-HAPELDQSPRKEEDIYT*TLLPY 308
D S+NN A+ V +KYK+ILY A +L+ S R +I+ L Y
Sbjct: 703 ----DRDSKNN-AADKVLRKYKEILYGGAEDLENSTRPLHEIFDEALAIY 747
Score = 67.0 bits (162), Expect(2) = 3e-32
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAKRHG-VGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLREL 159
I+ ALAIY V+YD A G VGKC FAWKVAG ALCKYY+ +Q S SVL++L
Sbjct: 739 IFDEALAIYRVTYDHAISQGAVGKCCFAWKVAGSALCKYYMNKQGARTIEASFSVLKDL 797
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 93.2 bits (230), Expect(2) = 7e-31
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Frame = -2
Query: 814 DIYYDALDVAK-SGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSI 638
+IYYDALD K SG K+ +P L+ +K P +M+ + S++STS+
Sbjct: 819 NIYYDALDAPKKSGIKVEVPEDLKVEKFPCYMRRD---------------ESVSFESTSV 863
Query: 637 LGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPEDRIAFWTEQHNMYRTEMRHALNNEAV 458
LG I++ V+++E ++ V E+ KLP F+ VPE + W ++ YR EM+ A++ V
Sbjct: 864 LGTIYNTVKSYEAV-DRSVTEIWKLPCFDDGVPEACMTKWKGYYDQYRWEMKEAIDKCTV 922
Query: 457 KDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT*TLLPY 308
+ +A+ V +KYKQILY A E +QS R E+IY L Y
Sbjct: 923 ---------EREEAAELVIEKYKQILYGAAEFEQSTRTLEEIYNEALAIY 963
Score = 68.2 bits (165), Expect(2) = 7e-31
Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYD-EAKRHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLRELQ 156
IY ALAIY+++YD A R V C FAW+VAG AL K+Y RQ D + +CS SVLRE+
Sbjct: 955 IYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASVLREIC 1014
Query: 155 G 153
G
Sbjct: 1015 G 1015
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 93.2 bits (230), Expect(2) = 7e-31
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Frame = -2
Query: 814 DIYYDALDVAK-SGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSI 638
+IYYDALD K SG K+ +P L+ +K P +M+ + S++STS+
Sbjct: 817 NIYYDALDAPKKSGIKVEVPEDLKVEKFPCYMRRD---------------ESVSFESTSV 861
Query: 637 LGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPEDRIAFWTEQHNMYRTEMRHALNNEAV 458
LG I++ V+++E ++ V E+ KLP F+ VPE + W ++ YR EM+ A++ V
Sbjct: 862 LGTIYNTVKSYEAV-DRSVTEIWKLPCFDDGVPEACMTKWKGYYDQYRWEMKEAIDKCTV 920
Query: 457 KDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT*TLLPY 308
+ +A+ V +KYKQILY A E +QS R E+IY L Y
Sbjct: 921 ---------EREEAAELVIEKYKQILYGAAEFEQSTRTLEEIYNEALAIY 961
Score = 68.2 bits (165), Expect(2) = 7e-31
Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYD-EAKRHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLRELQ 156
IY ALAIY+++YD A R V C FAW+VAG AL K+Y RQ D + +CS SVLRE+
Sbjct: 953 IYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASVLREIC 1012
Query: 155 G 153
G
Sbjct: 1013 G 1013
>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 1011
Score = 100 bits (250), Expect(2) = 4e-29
Identities = 62/169 (36%), Positives = 89/169 (52%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
DIYYDALD KSGKK+ IP L+ K PH+M+ NS SY STSIL
Sbjct: 817 DIYYDALDAPKSGKKVSIPHYLKANKFPHYMEK--------GNSC-------SYHSTSIL 861
Query: 634 GQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPEDRIAFWTEQHNMYRTEMRHALNNEAVK 455
GQI+D V+++ + + + E+ KLP FE +P+ + W ++ Y+ +M A+N +
Sbjct: 862 GQIYDHVDSYPD-EDLCITEISKLPCFEVEIPQRCMTLWRGRYEEYKKDMTRAMNFDC-- 918
Query: 454 DQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT*TLLPY 308
+ V +KYK +LY A E +Q+ RK EDI+ L Y
Sbjct: 919 -------ELRITSCNEVIKKYKMLLYGAVEFEQTVRKTEDIFDEALAIY 960
Score = 54.7 bits (130), Expect(2) = 4e-29
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAK-RHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLREL 159
I+ ALAIYHV+YD A+ + + KC FAWKVAG ALC+ + + + SVL+E+
Sbjct: 952 IFDEALAIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYRKEKDLPILPSVLQEI 1010
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 89.0 bits (219), Expect(2) = 2e-26
Identities = 56/163 (34%), Positives = 82/163 (50%), Gaps = 1/163 (0%)
Frame = -2
Query: 814 DIYYDALDVAKSG-KKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSI 638
DIYYDALD K G +KI +P L+ + PHFM+ + +Y+STSI
Sbjct: 682 DIYYDALDAPKKGGRKIEVPEALKAELFPHFMEK---------------HEKKTYRSTSI 726
Query: 637 LGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPEDRIAFWTEQHNMYRTEMRHALNNEAV 458
LG+I+D+V+A+E+ V E + W + YRTEMR+AL
Sbjct: 727 LGKIYDKVKAYEDM------------DLSSNVHESCLVKWKGLYGQYRTEMRNALQ---- 770
Query: 457 KDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIY 329
G + N + V +KYK+ILY A E + S R++E+I+
Sbjct: 771 ------AGKEKNNEANEVIKKYKEILYEAAEFNLSRRRDEEIF 807
Score = 57.8 bits (138), Expect(2) = 2e-26
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAKRHG-VGKCYFAWKVAGQALCK-YYLTRQNDAAFMCSKSVLR 165
I+ A A+Y V+Y+ AKR G VGKC FAW+VAG ALC Y L Q + +CS S L+
Sbjct: 806 IFEEARALYQVTYNHAKRQGAVGKCGFAWRVAGLALCTLYVLKNQEERPLICSPSALK 863
>ref|XP_006645606.1| PREDICTED: probable RNA-dependent RNA polymerase 4-like [Oryza
brachyantha]
Length = 1004
Score = 91.7 bits (226), Expect(2) = 5e-26
Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
D+YY ALD KSGKK+ IP L ++ PHFM S SY S+SIL
Sbjct: 798 DLYYVALDAPKSGKKVNIPSDLMVKQYPHFMGRSS-----------------SYHSSSIL 840
Query: 634 GQIFDEVEAFE--EFGNQQVIEVDKLPSF-EQVVPEDRIAFWTEQHNMYRTEMRHALNNE 464
G+++D+ + F N Q I + LP F E+V P W ++N Y ++ LN++
Sbjct: 841 GKLYDKADDANLLRFDNVQPIGISLLPCFTERVAPPTIKNLWQRRYNEYLSDSSKLLNDK 900
Query: 463 AVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT 326
AV + + N +Y+KYK +LY A E +++PR D++T
Sbjct: 901 AVDKE------EKNMKFEELYKKYKHMLYDASEFEETPRNFGDVFT 940
Score = 53.5 bits (127), Expect(2) = 5e-26
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAKR-HGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLR 165
++ +A AIY + Y++A+R + +C FAW VAG+ALC YY + +CS +LR
Sbjct: 938 VFTDACAIYQIVYEKARRENAAARCCFAWNVAGRALCHYYALKNEGDTVVCSLPLLR 994
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 114 bits (285), Expect = 4e-23
Identities = 62/172 (36%), Positives = 92/172 (53%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
D+YYDA+D KSG K+ IP +L+ K PHF+Q K SY STS+L
Sbjct: 905 DLYYDAIDAPKSGNKVYIPKRLKVDKFPHFLQKK-----------------ESYHSTSVL 947
Query: 634 GQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPEDRIAFWTEQHNMYRTEMRHALNNEAVK 455
G+I+D VE F+ +E+ KL +FE +P+ + W E++ YR EM+ ALN +
Sbjct: 948 GEIYDRVEKFKA-EEPAAVEIKKLSAFEVGIPDTCLRLWEERYRNYRFEMKEALNTSS-- 1004
Query: 454 DQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT*TLLPYIMS 299
N + V +KYKQ+LY AP++++S R D+Y L Y ++
Sbjct: 1005 -------ESKNDLADQVIKKYKQLLYEAPDMEESIRSTTDMYNDALAIYCVT 1049
>ref|XP_006645607.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-dependent RNA polymerase
3-like [Oryza brachyantha]
Length = 1109
Score = 81.6 bits (200), Expect(2) = 2e-22
Identities = 56/166 (33%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
D+YYDALD K+G K+ I L ++ PHFM + P SY S+SIL
Sbjct: 905 DLYYDALDAPKTGNKVNIASGLITKRYPHFM-GRIP----------------SYHSSSIL 947
Query: 634 GQIFDEVEAFE--EFGNQQVIEVDKLPSF-EQVVPEDRIAFWTEQHNMYRTEMRHALNNE 464
GQI+D E E + N + LP F E+ P + W +++ Y T+ R L E
Sbjct: 948 GQIYDRAEDIESLRYDNVAPSGISLLPCFTERDAPPETKRLWQQRYEEYLTDSR--LLYE 1005
Query: 463 AVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT 326
K+ + N +Y+KYK++LY A E +Q+PR +D++T
Sbjct: 1006 VDKE-------ERNMKFQKLYEKYKRMLYDASEFEQTPRGFDDVFT 1044
Score = 51.6 bits (122), Expect(2) = 2e-22
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAKRHG--VGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLREL 159
++ A IY + Y+EA+ +G G+C FAWKVAG+AL +Y + +CS +LR
Sbjct: 1042 VFTEACVIYQIVYEEARSYGGDAGRCGFAWKVAGRALRHFYALKNEGDTVLCSLPLLRRF 1101
Query: 158 Q 156
+
Sbjct: 1102 K 1102
>ref|XP_002455002.1| hypothetical protein SORBIDRAFT_03g002800 [Sorghum bicolor]
gi|241926977|gb|EES00122.1| hypothetical protein
SORBIDRAFT_03g002800 [Sorghum bicolor]
Length = 1127
Score = 80.1 bits (196), Expect(2) = 2e-22
Identities = 55/162 (33%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
DIYY ALD K G KI +P +L+ +K PHFM+ + SY STS+L
Sbjct: 926 DIYYLALDAPKEGNKITVPGELKVKKYPHFMERD---------------EKKSYTSTSVL 970
Query: 634 GQIFDEVEAFEEFGNQQVIEVDKLPSFEQV-VPEDRIAFWTEQHNMYRTEMRHALNNEAV 458
G+I+DEV +E I++ L F +V V ED W ++Y +R + + +
Sbjct: 971 GKIYDEV-MLKESEIDPEIKIVPLSCFTEVKVSEDYKGRW---RSLYYQYLRESTDLCKL 1026
Query: 457 KDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDI 332
+D+ ++ N +YQ+YK+ LY A E +QSPR++ D+
Sbjct: 1027 EDK-----AEKNNNYRQLYQEYKRKLYEAEEFEQSPREQLDL 1063
Score = 52.8 bits (125), Expect(2) = 2e-22
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = -1
Query: 320 ALAIYHVSYDEA-KRHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLRE 162
A A+Y V Y+ A R+ + KC FAWKVAG+ALC+ Y ++ +CS SVL +
Sbjct: 1067 ACAVYQVVYEYAMSRNDIAKCGFAWKVAGRALCRLYTLKRGGDTALCSFSVLED 1120
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 111 bits (278), Expect = 3e-22
Identities = 68/171 (39%), Positives = 95/171 (55%), Gaps = 1/171 (0%)
Frame = -2
Query: 817 TDIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSI 638
TDIYYDALD KSG K+ + +L+ +K PHFM +++SY STSI
Sbjct: 734 TDIYYDALDAPKSGMKVNVSKELKAEKFPHFM-----------------GRESSYHSTSI 776
Query: 637 LGQIFDEVEAFEEFGNQQVIEVDKLPSFE-QVVPEDRIAFWTEQHNMYRTEMRHALNNEA 461
LGQI+D VE+F+ NQ E+ +LP F VP+ + W ++++ YR+EM AL +
Sbjct: 777 LGQIYDAVESFQP-ENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHG- 834
Query: 460 VKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT*TLLPY 308
G ++ +A V KYKQILY A E ++SPR EDI+ L Y
Sbjct: 835 --------GETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIY 877
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 111 bits (278), Expect = 3e-22
Identities = 68/171 (39%), Positives = 95/171 (55%), Gaps = 1/171 (0%)
Frame = -2
Query: 817 TDIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSI 638
TDIYYDALD KSG K+ + +L+ +K PHFM +++SY STSI
Sbjct: 748 TDIYYDALDAPKSGMKVNVSKELKAEKFPHFM-----------------GRESSYHSTSI 790
Query: 637 LGQIFDEVEAFEEFGNQQVIEVDKLPSFE-QVVPEDRIAFWTEQHNMYRTEMRHALNNEA 461
LGQI+D VE+F+ NQ E+ +LP F VP+ + W ++++ YR+EM AL +
Sbjct: 791 LGQIYDAVESFQP-ENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQYRSEMAAALQHG- 848
Query: 460 VKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT*TLLPY 308
G ++ +A V KYKQILY A E ++SPR EDI+ L Y
Sbjct: 849 --------GETKDEYAAEVINKYKQILYGAAEFEESPRNLEDIFDEALAIY 891
>sp|Q5QMN4.2|RDR4_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 4; Short=OsRDR4
Length = 1183
Score = 71.6 bits (174), Expect(2) = 7e-21
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
D+YY ALD K G K+ IP L ++ PHFM ++SP SY S+SIL
Sbjct: 978 DLYYLALDAPKMGNKVNIPRDLMVKQYPHFM-DRSP----------------SYHSSSIL 1020
Query: 634 GQIFDEVEAFEEF--GNQQVIEVDKLPSF-EQVVPEDRIAFWTEQHNMYRTEMRHALNNE 464
G+I+D+ + N Q + LP F E+ VP W ++N Y + E
Sbjct: 1021 GKIYDKAGDPKPLRSDNVQPTSISSLPCFAERDVPPAIKQLWQHRYNEYLADSSLLYAEE 1080
Query: 463 AVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT 326
A ++ + +Y+KYK +LY A E +++PR +D+++
Sbjct: 1081 ADEE-------EKKIKFQELYEKYKHLLYGASEFEETPRDLDDVFS 1119
Score = 56.2 bits (134), Expect(2) = 7e-21
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAKR-HGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLRELQ 156
++ A AIY ++Y++A+ + V +C FAWKVAG+ALC +Y + A +CS +LR +
Sbjct: 1117 VFSEACAIYQIAYEKARSANNVARCGFAWKVAGRALCHFYTVKNEGNAVVCSLQLLRNFR 1176
>gb|EEE54053.1| hypothetical protein OsJ_00746 [Oryza sativa Japonica Group]
Length = 1148
Score = 71.6 bits (174), Expect(2) = 7e-21
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
D+YY ALD K G K+ IP L ++ PHFM ++SP SY S+SIL
Sbjct: 943 DLYYLALDAPKMGNKVNIPRDLMVKQYPHFM-DRSP----------------SYHSSSIL 985
Query: 634 GQIFDEVEAFEEF--GNQQVIEVDKLPSF-EQVVPEDRIAFWTEQHNMYRTEMRHALNNE 464
G+I+D+ + N Q + LP F E+ VP W ++N Y + E
Sbjct: 986 GKIYDKAGDPKPLRSDNVQPTSISSLPCFAERDVPPAIKQLWQHRYNEYLADSSLLYAEE 1045
Query: 463 AVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT 326
A ++ + +Y+KYK +LY A E +++PR +D+++
Sbjct: 1046 ADEE-------EKKIKFQELYEKYKHLLYGASEFEETPRDLDDVFS 1084
Score = 56.2 bits (134), Expect(2) = 7e-21
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAKR-HGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLRELQ 156
++ A AIY ++Y++A+ + V +C FAWKVAG+ALC +Y + A +CS +LR +
Sbjct: 1082 VFSEACAIYQIAYEKARSANNVARCGFAWKVAGRALCHFYTVKNEGNAVVCSLQLLRNFR 1141
>ref|NP_001042304.1| Os01g0198000 [Oryza sativa Japonica Group]
gi|56201772|dbj|BAD73222.1| RNA-dependent RNA polymerase
-like [Oryza sativa Japonica Group]
gi|56201879|dbj|BAD73329.1| RNA-dependent RNA polymerase
-like [Oryza sativa Japonica Group]
gi|113531835|dbj|BAF04218.1| Os01g0198000 [Oryza sativa
Japonica Group] gi|215693837|dbj|BAG89036.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 582
Score = 71.6 bits (174), Expect(2) = 7e-21
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
D+YY ALD K G K+ IP L ++ PHFM ++SP SY S+SIL
Sbjct: 377 DLYYLALDAPKMGNKVNIPRDLMVKQYPHFM-DRSP----------------SYHSSSIL 419
Query: 634 GQIFDEVEAFEEF--GNQQVIEVDKLPSF-EQVVPEDRIAFWTEQHNMYRTEMRHALNNE 464
G+I+D+ + N Q + LP F E+ VP W ++N Y + E
Sbjct: 420 GKIYDKAGDPKPLRSDNVQPTSISSLPCFAERDVPPAIKQLWQHRYNEYLADSSLLYAEE 479
Query: 463 AVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT 326
A ++ + +Y+KYK +LY A E +++PR +D+++
Sbjct: 480 ADEE-------EKKIKFQELYEKYKHLLYGASEFEETPRDLDDVFS 518
Score = 56.2 bits (134), Expect(2) = 7e-21
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAKR-HGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLRELQ 156
++ A AIY ++Y++A+ + V +C FAWKVAG+ALC +Y + A +CS +LR +
Sbjct: 516 VFSEACAIYQIAYEKARSANNVARCGFAWKVAGRALCHFYTVKNEGNAVVCSLQLLRNFR 575
>gb|EEE54052.1| hypothetical protein OsJ_00745 [Oryza sativa Japonica Group]
Length = 1243
Score = 77.4 bits (189), Expect(2) = 8e-21
Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
D+YY ALD K+G K+ IP L ++ PHFM + SY S+SIL
Sbjct: 1039 DLYYLALDAPKTGNKVNIPSDLMVKQYPHFM-----------------GRSFSYHSSSIL 1081
Query: 634 GQIFDEVEAFEEFG--NQQVIEVDKLPSF-EQVVPEDRIAFWTEQHNMYRTEMRHALNNE 464
GQI+D+ E E N Q I V LP F E+ P W ++ Y T+ +
Sbjct: 1082 GQIYDKAEDVESLRSCNVQPIGVSLLPCFMEREAPPAARHLWQHRYEEYLTD--STMLYR 1139
Query: 463 AVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT 326
A+ D+ + N +Y+KYK +LY A E +Q+ R +D+++
Sbjct: 1140 AMVDK-----EERNMKFQELYEKYKHMLYDASEFEQTQRDPDDVFS 1180
Score = 50.1 bits (118), Expect(2) = 8e-21
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAK-RHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLREL 159
++ A IY + Y++A+ + +C FAWKVAG+ALC +Y + +CS +LR++
Sbjct: 1178 VFSEACVIYQIVYEKARWSNDASRCGFAWKVAGRALCHFYALKNEGDTALCSLPLLRKI 1236
>ref|NP_001042303.1| Os01g0197900 [Oryza sativa Japonica Group]
gi|56201770|dbj|BAD73220.1| unknown protein [Oryza
sativa Japonica Group] gi|56201877|dbj|BAD73327.1|
unknown protein [Oryza sativa Japonica Group]
gi|113531834|dbj|BAF04217.1| Os01g0197900 [Oryza sativa
Japonica Group]
Length = 387
Score = 77.4 bits (189), Expect(2) = 9e-21
Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
D+YY ALD K+G K+ IP L ++ PHFM + SY S+SIL
Sbjct: 183 DLYYLALDAPKTGNKVNIPSDLMVKQYPHFM-----------------GRSFSYHSSSIL 225
Query: 634 GQIFDEVEAFEEFG--NQQVIEVDKLPSF-EQVVPEDRIAFWTEQHNMYRTEMRHALNNE 464
GQI+D+ E E N Q I V LP F E+ P W ++ Y T+ +
Sbjct: 226 GQIYDKAEDVESLRSCNVQPIGVSLLPCFMEREAPPAARHLWQHRYEEYLTD--STMLYR 283
Query: 463 AVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT 326
A+ D+ + N +Y+KYK +LY A E +Q+ R +D+++
Sbjct: 284 AMVDK-----EERNMKFQELYEKYKHMLYDASEFEQTQRDPDDVFS 324
Score = 50.1 bits (118), Expect(2) = 9e-21
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAK-RHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLREL 159
++ A IY + Y++A+ + +C FAWKVAG+ALC +Y + +CS +LR++
Sbjct: 322 VFSEACVIYQIVYEKARWSNDASRCGFAWKVAGRALCHFYALKNEGDTALCSLPLLRKI 380
>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
arietinum]
Length = 997
Score = 67.4 bits (163), Expect(2) = 1e-20
Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Frame = -2
Query: 814 DIYYDALDVAKSGK-KIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSI 638
DIYY+ALD K G KI +P L + PH+M+ R S+ STSI
Sbjct: 803 DIYYEALDAPKKGGGKIQVPEDLTVELFPHYME----------------RDGKSFTSTSI 846
Query: 637 LGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPEDRIAFWTEQHNMYRTEMRHALNNEAV 458
LG I+DEV ++ + ++ KLP + +P + W + YRT+M A
Sbjct: 847 LGLIYDEVCRWQT-SDMSGTKIRKLPCLDVEIPMHCVEKWETLYKEYRTDMSFACQ---- 901
Query: 457 KDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT*TLLPY 308
S + + +A V +KYKQ A ++ + DIY L Y
Sbjct: 902 --------SNSKEEAAEVIKKYKQKFDVAANIEDCSKNVTDIYHEALAVY 943
Score = 59.7 bits (143), Expect(2) = 1e-20
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAKR-HGVGKCYFAWKVAGQALCKYYLTRQNDAAFM-CSKSVLREL 159
IY ALA+YHV+YD A + + V KC FAWKVAG AL Y Q+ + + CS SVLRE+
Sbjct: 935 IYHEALAVYHVTYDYAIQWNDVAKCAFAWKVAGPALTNYCAENQSHSKCLPCSSSVLREI 994
Query: 158 QG 153
G
Sbjct: 995 FG 996
>sp|Q5QMN5.2|RDR3_ORYSJ RecName: Full=Probable RNA-dependent RNA polymerase 3; Short=OsRDR3
Length = 1153
Score = 77.4 bits (189), Expect(2) = 2e-20
Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
D+YY ALD K+G K+ IP L ++ PHFM + SY S+SIL
Sbjct: 958 DLYYLALDAPKTGNKVNIPSDLMVKQYPHFM-----------------GRSFSYHSSSIL 1000
Query: 634 GQIFDEVEAFEEFG--NQQVIEVDKLPSF-EQVVPEDRIAFWTEQHNMYRTEMRHALNNE 464
GQI+D+ E E N Q I V LP F E+ P W ++ Y T+ +
Sbjct: 1001 GQIYDKAEDVESLRSCNVQPIGVSLLPCFMEREAPPAARHLWQHRYEEYLTD--STMLYR 1058
Query: 463 AVKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT 326
A+ D+ + N +Y+KYK +LY A E +Q+ R +D+++
Sbjct: 1059 AMVDK-----EERNMKFQELYEKYKHMLYDASEFEQTQRDPDDVFS 1099
Score = 48.9 bits (115), Expect(2) = 2e-20
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEAK-RHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVLR 165
++ A IY + Y++A+ + +C FAWKVAG+ALC +Y + +CS +LR
Sbjct: 1097 VFSEACVIYQIVYEKARWSNDASRCGFAWKVAGRALCHFYALKNEGDTALCSLPLLR 1153
>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
Length = 1202
Score = 104 bits (260), Expect = 3e-20
Identities = 66/170 (38%), Positives = 92/170 (54%)
Frame = -2
Query: 817 TDIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSI 638
TDIYYDALD KSG K+ + +L+ +K PHFM +++SY STSI
Sbjct: 1017 TDIYYDALDAPKSGMKVNVSKELKAEKFPHFM-----------------GRESSYHSTSI 1059
Query: 637 LGQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPEDRIAFWTEQHNMYRTEMRHALNNEAV 458
LGQI+D VE+F+ NQ S + VP+ + W ++++ YR+EM AL +
Sbjct: 1060 LGQIYDAVESFQP-ENQ---------STKDAVPQACLRSWKDRYDQYRSEMAAALQHG-- 1107
Query: 457 KDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIYT*TLLPY 308
G ++ +A V KYKQILY A E ++SPRK EDI+ L Y
Sbjct: 1108 -------GETKDEYAAEVINKYKQILYGAAEFEESPRKLEDIFDEALAIY 1150
>ref|XP_004967185.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Setaria
italica]
Length = 763
Score = 71.6 bits (174), Expect(2) = 5e-20
Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 2/164 (1%)
Frame = -2
Query: 814 DIYYDALDVAKSGKKIVIPPKLRQQKTPHFMQNKSPGSSGLNNSAQSWRKDNSYQSTSIL 635
DIYY ALD KSG+KI +P +L ++ PHFM+ + Y S S+L
Sbjct: 573 DIYYLALDAPKSGEKITVPEELMVKQYPHFMER---------------GRYPDYHSASVL 617
Query: 634 GQIFDEVEAFEEFGNQQVIEVDKLPSFEQVVPEDRIAFWTEQHNMYRTEMR--HALNNEA 461
G+I+DEV + E +I ED W + Y E H L N+A
Sbjct: 618 GKIYDEVTSQESEAGPSIIS------------EDYKRRWAALYQEYLRESSKLHKLENKA 665
Query: 460 VKDQFADLGSQNNQASAAVYQKYKQILYHAPELDQSPRKEEDIY 329
+ N +YQ+YK +LY A E + SPR+ D++
Sbjct: 666 ----------ERNTNFRELYQEYKWMLYKAEEFEYSPRERFDLF 699
Score = 53.1 bits (126), Expect(2) = 5e-20
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = -1
Query: 332 IYMNALAIYHVSYDEA-KRHGVGKCYFAWKVAGQALCKYYLTRQNDAAFMCSKSVL 168
++ A A+Y V Y+ A R+ V KC FAWKVAG+ALC+ Y + +CS SVL
Sbjct: 698 LFNEACAVYQVVYEHAVPRNEVSKCGFAWKVAGRALCQLYTLKHGGDTVLCSFSVL 753