BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00030467
         (1155 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mi...   516   e-144
ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mi...   507   e-141
ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mi...   502   e-139
ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mi...   502   e-139
ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mi...   501   e-139
gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucum...   500   e-139
ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mi...   498   e-138
ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mi...   496   e-138
ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mi...   496   e-138
ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudou...   496   e-137
ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mi...   495   e-137
ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus ...   493   e-137
ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago trunca...   492   e-136
gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK...   492   e-136
ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago trunca...   492   e-136
ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phas...   489   e-135
ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phas...   489   e-135
ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|...   488   e-135
ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Popu...   484   e-134
ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citr...   483   e-134

>ref|XP_002284797.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Vitis
            vinifera]
          Length = 503

 Score =  516 bits (1330), Expect = e-144
 Identities = 263/402 (65%), Positives = 305/402 (75%), Gaps = 21/402 (5%)
 Frame = -3

Query: 1144 DPNSIDRKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGN 965
            D  +  +KPRYKRRKIAIF AYCGVGYQGMQKNPGAKTIE DLEEALF SG +PE DRG+
Sbjct: 26   DTTTATKKPRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFFSGAVPEQDRGH 85

Query: 964  PKRFDWARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSS 785
            PKRFDWARSARTDKGVSAVGQVVSGRFY+DPPG ++RLNS+LP QIR+FGFKRVT SF++
Sbjct: 86   PKRFDWARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNSNLPPQIRIFGFKRVTASFNA 145

Query: 784  KKFCDRRRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRK 605
            KKFCDRRRYVYLIPVFALD ++HPDRESVLAS+GSENEL KCLEC +RGRKV+G+MGKR 
Sbjct: 146  KKFCDRRRYVYLIPVFALDPSSHPDRESVLASVGSENELVKCLECSERGRKVVGIMGKRS 205

Query: 604  IIESKTLEVDGIDVVAQTETTEIESGFVLNNDGTENENVELESKASGVELLAEI------ 443
              ESK    D  DV  + E+  I    +L ++  E      +++  G  +   I      
Sbjct: 206  -FESKVSVDDREDV--EGESKNIVGAAILKSEAKEESMASSDNRHDGNSISQPIKEGRCF 262

Query: 442  --------------GGSEEVG-SGLVQNSNGDGKAGKKSVFSYGEKEKEKFNRILGRYVG 308
                              E G S   Q+  G+ K  K S F YG+KE+E+FNRILG YVG
Sbjct: 263  QDNETSESTPDSRASAQNEPGVSHSEQSDKGENKLEKGSGFCYGDKERERFNRILGHYVG 322

Query: 307  THNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLA 128
            THNFHNFTTR KAEDP+A+RFI+SFD NT+V VEG++FVKCEVVGQSFMLHQIRKM+GLA
Sbjct: 323  THNFHNFTTRIKAEDPSAQRFIVSFDGNTIVTVEGIEFVKCEVVGQSFMLHQIRKMIGLA 382

Query: 127  VAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            VA+MR  APESL++ AL KDVN   PTAPEVGLYLDECFF+S
Sbjct: 383  VAIMRNVAPESLLETALLKDVNINVPTAPEVGLYLDECFFSS 424


>ref|XP_006342092.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Solanum
            tuberosum]
          Length = 569

 Score =  507 bits (1306), Expect = e-141
 Identities = 258/381 (67%), Positives = 307/381 (80%)
 Frame = -3

Query: 1144 DPNSIDRKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGN 965
            D ++ +RKPRYKRRK+AIF AYCGVGYQGMQKNPGAKTIE DLEEAL+Q+GG+P+ D+  
Sbjct: 38   DGSAPERKPRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPDHDKCQ 97

Query: 964  PKRFDWARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSS 785
            P++++WARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNS L  QIR+FGFKRVTN+FS+
Sbjct: 98   PRKYEWARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSILVPQIRIFGFKRVTNAFSA 157

Query: 784  KKFCDRRRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRK 605
            KKFCD+RRYVYL+PVFALD  AH DRESVLASLGS  EL+KCL CP+RGRKV+GVMG+R 
Sbjct: 158  KKFCDKRRYVYLVPVFALDPYAHRDRESVLASLGSGKELAKCLNCPERGRKVVGVMGRRV 217

Query: 604  IIESKTLEVDGIDVVAQTETTEIESGFVLNNDGTENENVELESKASGVELLAEIGGSEEV 425
                        D + Q+    +++  V  ND T + N+ +E++AS  E + E  G  E 
Sbjct: 218  -----------FDPITQS-VIIVDAPVVNANDPTTDTNMVIENEASLSEKVEERNGEVE- 264

Query: 424  GSGLVQNSNGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRTKAEDPAAKRF 245
              G  +N+  + +  ++SVF YGEKEKE+FNRIL  Y GTHNFHNFTTRTKA+DPAAKR+
Sbjct: 265  --GSNENAKMEEQV-EESVFCYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRY 321

Query: 244  IISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDV 65
            IISF+ANTVVNV+G+DFVKCEVVGQSFMLHQIRKM+GLAVA+MR  APESLI  A ++DV
Sbjct: 322  IISFNANTVVNVDGIDFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIVTAFRRDV 381

Query: 64   NFTAPTAPEVGLYLDECFFTS 2
            N   P APEVGLYLDECFFTS
Sbjct: 382  NINVPMAPEVGLYLDECFFTS 402


>ref|XP_006575306.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Glycine max]
          Length = 518

 Score =  502 bits (1292), Expect = e-139
 Identities = 263/414 (63%), Positives = 305/414 (73%), Gaps = 30/414 (7%)
 Frame = -3

Query: 1153 TNTDPNSIDRKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPD 974
            T +D      K RYKRRK+AIF AYCGVGYQGMQKNPGAKTIE DLEEAL+ SG +PE D
Sbjct: 4    TTSDDEETGTKKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQD 63

Query: 973  RGNPKRFDWARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNS 794
            RG PKR+DWARSARTDKGVSAVGQVVSGRFY+DPPG +DRLNS+LP QIR+FG+KRVT S
Sbjct: 64   RGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTAS 123

Query: 793  FSSKKFCDRRRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMG 614
            F++KKFCDRRRYVYLIPVFALD + H DRE+V+ASLGS NEL KCLEC +RGRKV+G++G
Sbjct: 124  FNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVG 183

Query: 613  KRKIIESKTLEVDGIDVVAQTETTEIESGFVLNNDGTENENVELESKASGVELLAEIGGS 434
             RK    + LE++ +DV         E+G   N D    E+VE+         L E  G+
Sbjct: 184  NRK----QNLELEAVDV---------EAGISSNRDSGVTEDVEVSLSKGDDNHLNEESGN 230

Query: 433  EEVG-----SGL-----------------VQNS--------NGDGKAGKKSVFSYGEKEK 344
            +  G     +GL                 V NS        NG+ K    S F YGEKE+
Sbjct: 231  DNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEKVNGEDKPTNGSRFCYGEKER 290

Query: 343  EKFNRILGRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSF 164
            E+FN+IL  +VGTHNFHNFTTRTKAEDPAA+R+IISF+ANT + VEGV+FVKCEVVGQSF
Sbjct: 291  ERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSF 350

Query: 163  MLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            MLHQIRKM+GLAVA+MR  APESLID ALQ+DVN   PTAPEVGLYLDECFFTS
Sbjct: 351  MLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLYLDECFFTS 404


>ref|XP_003519139.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Glycine max]
          Length = 548

 Score =  502 bits (1292), Expect = e-139
 Identities = 263/414 (63%), Positives = 305/414 (73%), Gaps = 30/414 (7%)
 Frame = -3

Query: 1153 TNTDPNSIDRKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPD 974
            T +D      K RYKRRK+AIF AYCGVGYQGMQKNPGAKTIE DLEEAL+ SG +PE D
Sbjct: 34   TTSDDEETGTKKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEQD 93

Query: 973  RGNPKRFDWARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNS 794
            RG PKR+DWARSARTDKGVSAVGQVVSGRFY+DPPG +DRLNS+LP QIR+FG+KRVT S
Sbjct: 94   RGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTAS 153

Query: 793  FSSKKFCDRRRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMG 614
            F++KKFCDRRRYVYLIPVFALD + H DRE+V+ASLGS NEL KCLEC +RGRKV+G++G
Sbjct: 154  FNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVVGLVG 213

Query: 613  KRKIIESKTLEVDGIDVVAQTETTEIESGFVLNNDGTENENVELESKASGVELLAEIGGS 434
             RK    + LE++ +DV         E+G   N D    E+VE+         L E  G+
Sbjct: 214  NRK----QNLELEAVDV---------EAGISSNRDSGVTEDVEVSLSKGDDNHLNEESGN 260

Query: 433  EEVG-----SGL-----------------VQNS--------NGDGKAGKKSVFSYGEKEK 344
            +  G     +GL                 V NS        NG+ K    S F YGEKE+
Sbjct: 261  DNKGGMNCKTGLETVIPVQEEGTPLNGESVNNSDILEEEKVNGEDKPTNGSRFCYGEKER 320

Query: 343  EKFNRILGRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSF 164
            E+FN+IL  +VGTHNFHNFTTRTKAEDPAA+R+IISF+ANT + VEGV+FVKCEVVGQSF
Sbjct: 321  ERFNKILKCFVGTHNFHNFTTRTKAEDPAARRYIISFNANTTLVVEGVEFVKCEVVGQSF 380

Query: 163  MLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            MLHQIRKM+GLAVA+MR  APESLID ALQ+DVN   PTAPEVGLYLDECFFTS
Sbjct: 381  MLHQIRKMIGLAVAIMRNCAPESLIDEALQQDVNINVPTAPEVGLYLDECFFTS 434


>ref|XP_004238400.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Solanum
            lycopersicum]
          Length = 598

 Score =  501 bits (1290), Expect = e-139
 Identities = 257/383 (67%), Positives = 299/383 (78%), Gaps = 2/383 (0%)
 Frame = -3

Query: 1144 DPNSIDRKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGN 965
            D ++ +RKPRYKRRK+AIF AYCGVGYQGMQKNPGAKTIE DLEEAL+Q+GG+P+ D+  
Sbjct: 37   DGSAPERKPRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPDHDKCQ 96

Query: 964  PKRFDWARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSS 785
            P++++WARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNS L  QIR+FGFKRVTN+FS+
Sbjct: 97   PRKYEWARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSILVPQIRIFGFKRVTNAFSA 156

Query: 784  KKFCDRRRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRK 605
            KKFCD+RRYVYL+PVFALD  AH DRESVLASLGS  EL KCL CP+RGRKV GVMG+R 
Sbjct: 157  KKFCDKRRYVYLVPVFALDPYAHRDRESVLASLGSGKELVKCLNCPERGRKVAGVMGRRV 216

Query: 604  I--IESKTLEVDGIDVVAQTETTEIESGFVLNNDGTENENVELESKASGVELLAEIGGSE 431
               I    + VD   V A   TT  ++  ++ N+ + +E V  E +   VE   E    E
Sbjct: 217  FDPITQSVIIVDAPVVTANDPTT--DTNMIIENEASLSEKV--EERIDVVERSDENAKKE 272

Query: 430  EVGSGLVQNSNGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRTKAEDPAAK 251
            E                ++SVF YGEKEKE+FNRIL  + GTHNFHNFTTRTKA+DPAAK
Sbjct: 273  E--------------QVEESVFCYGEKEKERFNRILKYFEGTHNFHNFTTRTKADDPAAK 318

Query: 250  RFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQK 71
            RFIISF+ANTVVNV+G+DFVKCEV+GQSFMLHQIRKM+GLAVA+MR  APESLI  A ++
Sbjct: 319  RFIISFNANTVVNVDGIDFVKCEVIGQSFMLHQIRKMIGLAVAIMRNCAPESLIVTAFRR 378

Query: 70   DVNFTAPTAPEVGLYLDECFFTS 2
            DVN   P APEVGLYLDECFFTS
Sbjct: 379  DVNINVPMAPEVGLYLDECFFTS 401


>gb|ADN34131.1| tRNA pseudouridine synthase family protein [Cucumis melo subsp. melo]
          Length = 519

 Score =  500 bits (1287), Expect = e-139
 Identities = 258/391 (65%), Positives = 307/391 (78%), Gaps = 16/391 (4%)
 Frame = -3

Query: 1126 RKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDW 947
            +K RYKRRK+AIF AYCGVGYQGMQKNPGAKTIEADLEEAL+ +G +PE DRG  KR+DW
Sbjct: 48   KKQRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDW 107

Query: 946  ARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDR 767
            ARSARTDKGVSAVGQVVSGRFY+DPPGF+DRLNS+L  QIR+FG+KRVT SF++KKFCDR
Sbjct: 108  ARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDR 167

Query: 766  RRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKI-IESK 590
            RRYVYLIPVFALD N H DRESV ASLGS+NEL KCLEC +RGRKV G+MGKR   +++ 
Sbjct: 168  RRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLMGKRNFEVKTA 227

Query: 589  TLEVD-GIDVVAQTETTEIESGFVLNNDGTENE-----NVELESKASGV----ELLAEIG 440
              E D   ++V   E +++++  VL +  T ++     +V +E+ A+ +    E +A+  
Sbjct: 228  ITESDISSNIVNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELTVASEGIAKSE 287

Query: 439  GSEEVGSG-----LVQNSNGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRT 275
             SE  G G     +V   + +GK      F YGE+EK +FNRIL  YVGTHNFHNFTTRT
Sbjct: 288  SSEMSGLGNDSEIVVSKESVNGKEKPSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRT 347

Query: 274  KAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPES 95
            KAEDPAA+RFI+SFDA+T V VEG++FVKCEVVGQSFMLHQIRKM+GLAVA+MR  APES
Sbjct: 348  KAEDPAARRFIVSFDASTTVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPES 407

Query: 94   LIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            LI+ ALQKDVN   PTAPEVGLYLDEC FTS
Sbjct: 408  LIEKALQKDVNINVPTAPEVGLYLDECLFTS 438


>ref|XP_004145528.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Cucumis
            sativus]
          Length = 519

 Score =  498 bits (1281), Expect = e-138
 Identities = 257/391 (65%), Positives = 305/391 (78%), Gaps = 16/391 (4%)
 Frame = -3

Query: 1126 RKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDW 947
            +K RYKRRK+AIF AYCGVGYQGMQKNPGAKTIEADLEEAL+ +G +PE DRG  KR+DW
Sbjct: 48   KKQRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDW 107

Query: 946  ARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDR 767
            ARSARTDKGVSAVGQVVSGRFY+DPPGF+DRLNS+L  QIR+FG+KRVT SF++KKFCDR
Sbjct: 108  ARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDR 167

Query: 766  RRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKI-IESK 590
            RRYVYLIPVFALD N H DRESV ASLGS+NEL KCLEC +RGRKV G++GKR   +++ 
Sbjct: 168  RRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTA 227

Query: 589  TLEVD-GIDVVAQTETTEIESGFVLNNDGTENE-----NVELESKAS----GVELLAEIG 440
              E D   + V   E +++++  VL +  T ++     +V +E+ A+    G E  A+  
Sbjct: 228  ITESDISSNTVNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSE 287

Query: 439  GSEEVGSG-----LVQNSNGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRT 275
             SE  G G     +V   + +GK      F YGE+EK +FNRIL  YVGTHNFHNFTTRT
Sbjct: 288  SSEMSGLGSDSEIVVSKESVNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRT 347

Query: 274  KAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPES 95
            KAEDPAA+RFI+SFDA+ +V VEG++FVKCEVVGQSFMLHQIRKM+GLAVA+MR  APES
Sbjct: 348  KAEDPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPES 407

Query: 94   LIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            LI+ ALQKDVN   PTAPEVGLYLDEC FTS
Sbjct: 408  LIEKALQKDVNINVPTAPEVGLYLDECLFTS 438


>ref|XP_004507720.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X2 [Cicer arietinum]
          Length = 475

 Score =  496 bits (1278), Expect = e-138
 Identities = 251/383 (65%), Positives = 297/383 (77%), Gaps = 9/383 (2%)
 Frame = -3

Query: 1123 KPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDWA 944
            K RYKRRK+AI  AYCGVGYQGMQKNPGAKTIE ++EEAL+ SG +PE DRG  KR+DWA
Sbjct: 18   KVRYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGEIEEALYVSGAVPEQDRGMSKRYDWA 77

Query: 943  RSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRR 764
            RSARTDKGVSAVGQVVSGRFY+DPPGF+DRLNS+LP QIR+FG+KRVT SFS+KKFCDRR
Sbjct: 78   RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRR 137

Query: 763  RYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTL 584
            RYVYLIPVFALD   H DRE+VLASLGSENEL KCLEC +RGRKV G++G  K    + L
Sbjct: 138  RYVYLIPVFALDPCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVGNSK----RNL 193

Query: 583  EVDGIDVVAQTETTEIESGFVLNNDGTENENVE-------LESKASGVELLAEIGGSEEV 425
            E++ +DV    +  +  S     ND     +VE        E+  SG + ++ + G  E 
Sbjct: 194  ELEAMDVETTDKGDDNRSNKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSPLNGGSEN 253

Query: 424  GSGLVQNS--NGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRTKAEDPAAK 251
             S +++    NG+    K+S F YGEKE+E+FN+IL  YVGTHNFHNFTTR K EDP+AK
Sbjct: 254  NSAVLEEEKVNGEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAK 313

Query: 250  RFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQK 71
            RFIISFDA+  V +EG++FVKCE+VGQSFMLHQIRKM+GLAVA+MR  APESLI+ ALQ 
Sbjct: 314  RFIISFDASNTVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQT 373

Query: 70   DVNFTAPTAPEVGLYLDECFFTS 2
            DV+ T PTAPEVGLYLDECFFTS
Sbjct: 374  DVSITVPTAPEVGLYLDECFFTS 396


>ref|XP_004507719.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like isoform
            X1 [Cicer arietinum]
          Length = 505

 Score =  496 bits (1278), Expect = e-138
 Identities = 251/383 (65%), Positives = 297/383 (77%), Gaps = 9/383 (2%)
 Frame = -3

Query: 1123 KPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDWA 944
            K RYKRRK+AI  AYCGVGYQGMQKNPGAKTIE ++EEAL+ SG +PE DRG  KR+DWA
Sbjct: 48   KVRYKRRKVAILFAYCGVGYQGMQKNPGAKTIEGEIEEALYVSGAVPEQDRGMSKRYDWA 107

Query: 943  RSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRR 764
            RSARTDKGVSAVGQVVSGRFY+DPPGF+DRLNS+LP QIR+FG+KRVT SFS+KKFCDRR
Sbjct: 108  RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGYKRVTASFSAKKFCDRR 167

Query: 763  RYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKTL 584
            RYVYLIPVFALD   H DRE+VLASLGSENEL KCLEC +RGRKV G++G  K    + L
Sbjct: 168  RYVYLIPVFALDPCCHRDRETVLASLGSENELVKCLECSERGRKVEGLVGNSK----RNL 223

Query: 583  EVDGIDVVAQTETTEIESGFVLNNDGTENENVE-------LESKASGVELLAEIGGSEEV 425
            E++ +DV    +  +  S     ND     +VE        E+  SG + ++ + G  E 
Sbjct: 224  ELEAMDVETTDKGDDNRSNKESINDNEGKVSVEDVNSKTSFETVVSGQDEVSPLNGGSEN 283

Query: 424  GSGLVQNS--NGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRTKAEDPAAK 251
             S +++    NG+    K+S F YGEKE+E+FN+IL  YVGTHNFHNFTTR K EDP+AK
Sbjct: 284  NSAVLEEEKVNGEDTPAKRSEFCYGEKERERFNKILKSYVGTHNFHNFTTRIKPEDPSAK 343

Query: 250  RFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQK 71
            RFIISFDA+  V +EG++FVKCE+VGQSFMLHQIRKM+GLAVA+MR  APESLI+ ALQ 
Sbjct: 344  RFIISFDASNTVVIEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQT 403

Query: 70   DVNFTAPTAPEVGLYLDECFFTS 2
            DV+ T PTAPEVGLYLDECFFTS
Sbjct: 404  DVSITVPTAPEVGLYLDECFFTS 426


>ref|XP_004157082.1| PREDICTED: LOW QUALITY PROTEIN: tRNA pseudouridine synthase A,
            mitochondrial-like [Cucumis sativus]
          Length = 519

 Score =  496 bits (1276), Expect = e-137
 Identities = 256/391 (65%), Positives = 304/391 (77%), Gaps = 16/391 (4%)
 Frame = -3

Query: 1126 RKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDW 947
            +K RYKRRK+A F AYCGVGYQGMQKNPGAKTIEADLEEAL+ +G +PE DRG  KR+DW
Sbjct: 48   KKQRYKRRKVAXFFAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDW 107

Query: 946  ARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDR 767
            ARSARTDKGVSAVGQVVSGRFY+DPPGF+DRLNS+L  QIR+FG+KRVT SF++KKFCDR
Sbjct: 108  ARSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDR 167

Query: 766  RRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKI-IESK 590
            RRYVYLIPVFALD N H DRESV ASLGS+NEL KCLEC +RGRKV G++GKR   +++ 
Sbjct: 168  RRYVYLIPVFALDPNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTA 227

Query: 589  TLEVD-GIDVVAQTETTEIESGFVLNNDGTENE-----NVELESKAS----GVELLAEIG 440
              E D   + V   E +++++  VL +  T ++     +V +E+ A+    G E  A+  
Sbjct: 228  ITESDISSNTVNAIEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSE 287

Query: 439  GSEEVGSG-----LVQNSNGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRT 275
             SE  G G     +V   + +GK      F YGE+EK +FNRIL  YVGTHNFHNFTTRT
Sbjct: 288  SSEMSGLGSDSEIVVSKESVNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRT 347

Query: 274  KAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPES 95
            KAEDPAA+RFI+SFDA+ +V VEG++FVKCEVVGQSFMLHQIRKM+GLAVA+MR  APES
Sbjct: 348  KAEDPAARRFIVSFDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPES 407

Query: 94   LIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            LI+ ALQKDVN   PTAPEVGLYLDEC FTS
Sbjct: 408  LIEKALQKDVNINVPTAPEVGLYLDECLFTS 438


>ref|XP_004292926.1| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
            [Fragaria vesca subsp. vesca]
          Length = 591

 Score =  495 bits (1274), Expect = e-137
 Identities = 256/375 (68%), Positives = 295/375 (78%)
 Frame = -3

Query: 1126 RKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDW 947
            +K R KRRK+AIF AYCGVGYQGMQKNPGAKTIE DLEEAL+ SG +PE DR NPKR+DW
Sbjct: 44   QKQRLKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYLSGAVPEQDRSNPKRYDW 103

Query: 946  ARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDR 767
            ARSARTDKGVSAVGQVVSGRFYVDPPGF+DRLNSHL  QIR+FG+KRVT SF++KKFCDR
Sbjct: 104  ARSARTDKGVSAVGQVVSGRFYVDPPGFVDRLNSHLSPQIRIFGYKRVTASFNAKKFCDR 163

Query: 766  RRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKT 587
            RRYVYLIPVFALD +AH DRESV ASLGS+ E  KCLEC DRGRKV G+MGKR      T
Sbjct: 164  RRYVYLIPVFALDPSAHRDRESVKASLGSDEEFVKCLECSDRGRKVGGLMGKR------T 217

Query: 586  LEVDGIDVVAQTETTEIESGFVLNNDGTENENVELESKASGVELLAEIGGSEEVGSGLVQ 407
             ++ G +       TEI +     ND  + +N ++E + + V   A++  +EEV      
Sbjct: 218  YQLRGGNSYNSESVTEIST-----NDDMKIDN-DIEGEDNVVVGNADMNSAEEV------ 265

Query: 406  NSNGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRTKAEDPAAKRFIISFDA 227
             + G+ KA + S F YGEKEKE+FNRIL  Y GTHNFHNFTTRTKAEDPAA R+IISF A
Sbjct: 266  -NGGEKKAVEGSGFCYGEKEKERFNRILSCYQGTHNFHNFTTRTKAEDPAAIRYIISFSA 324

Query: 226  NTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPT 47
            N  V VEG++FVKCEVVGQSFMLHQIRK++GLAVA+MR  APESL++ ALQKDVN   PT
Sbjct: 325  NATVTVEGIEFVKCEVVGQSFMLHQIRKLIGLAVAIMRNCAPESLLERALQKDVNVNVPT 384

Query: 46   APEVGLYLDECFFTS 2
            APEVGLYLDECFF+S
Sbjct: 385  APEVGLYLDECFFSS 399


>ref|XP_002510619.1| pseudouridylate synthase, putative [Ricinus communis]
            gi|223551320|gb|EEF52806.1| pseudouridylate synthase,
            putative [Ricinus communis]
          Length = 584

 Score =  493 bits (1269), Expect = e-137
 Identities = 263/424 (62%), Positives = 305/424 (71%), Gaps = 49/424 (11%)
 Frame = -3

Query: 1126 RKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDW 947
            +K RYKRRK+AIF AYCGVGYQGMQKNPGAKTIE DLEEALF SG +PE DRG PKR+DW
Sbjct: 47   KKQRYKRRKMAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGCPKRYDW 106

Query: 946  ARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDR 767
            ARSARTDKGVSAVGQV+SGRFYVDPPG +DRLNS LP QIR+FG+KRVT SF++KKFCDR
Sbjct: 107  ARSARTDKGVSAVGQVISGRFYVDPPGLVDRLNSILPSQIRIFGYKRVTASFNAKKFCDR 166

Query: 766  RRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKT 587
            RRYVYLIPVFALD ++H DRESVLASLGS +EL KCLEC +RGRKV+G +GKR   ESK+
Sbjct: 167  RRYVYLIPVFALDPSSHRDRESVLASLGSGDELVKCLECSERGRKVIGAVGKRS-FESKS 225

Query: 586  ------LEVDGIDVVAQTETTE-------------IESGFVLNNDGTENENVELESKASG 464
                  + ++G   +A  E  E             + S FV   + + NE+ E ES    
Sbjct: 226  EAFQTDILLNGGCAIANCEIKEDISMSMDNAHGVRMHSEFVEQTNVSHNEDSETESAMPR 285

Query: 463  VELLA--------------EIGGSEEVGSGLVQNS----------------NGDGKAGKK 374
             ++L+              E+  SE+   G  + S                NG+    K 
Sbjct: 286  TDILSNSEDGNVKSDSKQEEVMVSEDAADGGNKESETMEKDSKASVGEERVNGEEHVMKG 345

Query: 373  SVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDF 194
            S F YGE+EKEKFNRIL  YVG+HNFHNFTTRTKAEDP+A+R+IISFDA T V VEG++F
Sbjct: 346  SEFCYGEEEKEKFNRILKYYVGSHNFHNFTTRTKAEDPSAQRYIISFDARTTVTVEGIEF 405

Query: 193  VKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDEC 14
            VKCEV+GQSFMLHQIRKM+GLAVA+MR  APESLI  ALQKDV    PTAPEVGLYLDEC
Sbjct: 406  VKCEVIGQSFMLHQIRKMIGLAVAIMRNCAPESLISTALQKDVKINVPTAPEVGLYLDEC 465

Query: 13   FFTS 2
            FFTS
Sbjct: 466  FFTS 469


>ref|XP_003610360.1| tRNA pseudouridine synthase [Medicago truncatula]
            gi|355511415|gb|AES92557.1| tRNA pseudouridine synthase
            [Medicago truncatula] gi|388510220|gb|AFK43176.1| unknown
            [Medicago truncatula]
          Length = 530

 Score =  492 bits (1267), Expect = e-136
 Identities = 257/395 (65%), Positives = 299/395 (75%), Gaps = 21/395 (5%)
 Frame = -3

Query: 1123 KPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDWA 944
            K RYKRRK+AIF AYCGVGYQGMQKNPGAKTIE +LEEAL+ SG +PE DRG  KR+DWA
Sbjct: 48   KVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWA 107

Query: 943  RSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRR 764
            RSARTDKGVSAVGQVVSGRFY+DPPGF+DRLNS+LP QIR+FGFKRVT SFS+KKFCDRR
Sbjct: 108  RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRR 167

Query: 763  RYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMG-KRKIIESKT 587
            RYVYLIPVFALD   H DRE+VLASLGSENEL KCL C +RGRKV GV+G  ++ +E + 
Sbjct: 168  RYVYLIPVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEA 227

Query: 586  LEVDG-----IDVVAQTETTEIESGFVLNNDGTEN-------------ENVELESKASGV 461
            ++V+       DVV    T ++E      +D   N             E V  ++  S  
Sbjct: 228  VDVENGSSNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQ 287

Query: 460  ELLAEIGGSEEVGSGLVQNS--NGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNF 287
            + +A I G  E   G+++    N +  A   S F YGEKE+E+FN IL  YVGTHNFHNF
Sbjct: 288  DEVAPINGGSENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNF 347

Query: 286  TTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTG 107
            TTR K EDP+AKRFIISFDA+T V VEG++FVKCE+VGQSFMLHQIRKM+GLAVA+MR  
Sbjct: 348  TTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNC 407

Query: 106  APESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            APESLI+ ALQKDV+ T PTAPEVGLYLDECFFTS
Sbjct: 408  APESLIEKALQKDVSITVPTAPEVGLYLDECFFTS 442


>gb|ACJ85562.1| unknown [Medicago truncatula] gi|388491044|gb|AFK33588.1| unknown
            [Medicago truncatula]
          Length = 530

 Score =  492 bits (1267), Expect = e-136
 Identities = 257/395 (65%), Positives = 299/395 (75%), Gaps = 21/395 (5%)
 Frame = -3

Query: 1123 KPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDWA 944
            K RYKRRK+AIF AYCGVGYQGMQKNPGAKTIE +LEEAL+ SG +PE DRG  KR+DWA
Sbjct: 48   KVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWA 107

Query: 943  RSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRR 764
            RSARTDKGVSAVGQVVSGRFY+DPPGF+DRLNS+LP QIR+FGFKRVT SFS+KKFCDRR
Sbjct: 108  RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRR 167

Query: 763  RYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMG-KRKIIESKT 587
            RYVYLIPVFALD   H DRE+VLASLGSENEL KCL C +RGRKV GV+G  ++ +E + 
Sbjct: 168  RYVYLIPVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEA 227

Query: 586  LEVDG-----IDVVAQTETTEIESGFVLNNDGTEN-------------ENVELESKASGV 461
            ++V+       DVV    T ++E      +D   N             E V  ++  S  
Sbjct: 228  VDVENGSSNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDQ 287

Query: 460  ELLAEIGGSEEVGSGLVQNS--NGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNF 287
            + +A I G  E   G+++    N +  A   S F YGEKE+E+FN IL  YVGTHNFHNF
Sbjct: 288  DEVAPINGGSENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNF 347

Query: 286  TTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTG 107
            TTR K EDP+AKRFIISFDA+T V VEG++FVKCE+VGQSFMLHQIRKM+GLAVA+MR  
Sbjct: 348  TTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNC 407

Query: 106  APESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            APESLI+ ALQKDV+ T PTAPEVGLYLDECFFTS
Sbjct: 408  APESLIEKALQKDVSITVPTAPEVGLYLDECFFTS 442


>ref|XP_003610356.1| tRNA pseudouridine synthase [Medicago truncatula]
            gi|355511411|gb|AES92553.1| tRNA pseudouridine synthase
            [Medicago truncatula]
          Length = 530

 Score =  492 bits (1267), Expect = e-136
 Identities = 257/395 (65%), Positives = 299/395 (75%), Gaps = 21/395 (5%)
 Frame = -3

Query: 1123 KPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDWA 944
            K RYKRRK+AIF AYCGVGYQGMQKNPGAKTIE +LEEAL+ SG +PE DRG  KR+DWA
Sbjct: 48   KVRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGELEEALYVSGAVPEQDRGLSKRYDWA 107

Query: 943  RSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRR 764
            RSARTDKGVSAVGQVVSGRFY+DPPGF+DRLNS+LP QIR+FGFKRVT SFS+KKFCDRR
Sbjct: 108  RSARTDKGVSAVGQVVSGRFYIDPPGFVDRLNSNLPSQIRIFGFKRVTASFSAKKFCDRR 167

Query: 763  RYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMG-KRKIIESKT 587
            RYVYLIPVFALD   H DRE+VLASLGSENEL KCL C +RGRKV GV+G  ++ +E + 
Sbjct: 168  RYVYLIPVFALDPCCHRDRETVLASLGSENELVKCLPCSERGRKVEGVVGNSKRNLELEA 227

Query: 586  LEVDG-----IDVVAQTETTEIESGFVLNNDGTEN-------------ENVELESKASGV 461
            ++V+       DVV    T ++E      +D   N             E V  ++  S  
Sbjct: 228  VDVENGSSNKNDVVDSGVTKDVEVSLSKGDDNHLNKESINDNEGKVSVEEVNSKTVVSDE 287

Query: 460  ELLAEIGGSEEVGSGLVQNS--NGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNF 287
            + +A I G  E   G+++    N +  A   S F YGEKE+E+FN IL  YVGTHNFHNF
Sbjct: 288  DEVAPINGGSENNLGILEEEKVNREDTAANGSGFCYGEKERERFNNILKCYVGTHNFHNF 347

Query: 286  TTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTG 107
            TTR K EDP+AKRFIISFDA+T V VEG++FVKCE+VGQSFMLHQIRKM+GLAVA+MR  
Sbjct: 348  TTRIKPEDPSAKRFIISFDASTTVVVEGMEFVKCEIVGQSFMLHQIRKMMGLAVAIMRNC 407

Query: 106  APESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            APESLI+ ALQKDV+ T PTAPEVGLYLDECFFTS
Sbjct: 408  APESLIEKALQKDVSITVPTAPEVGLYLDECFFTS 442


>ref|XP_007154901.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028255|gb|ESW26895.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 556

 Score =  489 bits (1258), Expect = e-135
 Identities = 252/400 (63%), Positives = 305/400 (76%), Gaps = 26/400 (6%)
 Frame = -3

Query: 1123 KPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDWA 944
            K RYKRRKIAIF AYCGVGYQGMQKNPGAKTIE DLEEAL+ SG +PE DRG PKR+DWA
Sbjct: 17   KKRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWA 76

Query: 943  RSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRR 764
            RSARTDKGVSAVGQVVSGRFY+DPPG +DRLNS+L  QIR+FG+KRVT SF++KKFCDRR
Sbjct: 77   RSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRR 136

Query: 763  RYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRK-IIESKT 587
            RYVYLIPVFALD   H DRE+V+ASLGS NEL KCLEC +RGRKV+G++G RK  +E + 
Sbjct: 137  RYVYLIPVFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEA 196

Query: 586  LEVD-----GIDVVAQTETT-EIESGFVLNNDGTENENVELESKA----------SGVEL 455
            ++V+       DVV  +  T ++E+     +D   N    +++K           +G+E 
Sbjct: 197  MDVEAGISSNTDVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEK 256

Query: 454  -------LAEIGGSEEVGSGLVQNS--NGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTH 302
                   +  + G     S +++    NG+ K+   S+F YGEKE+E+FN+IL  +VGTH
Sbjct: 257  GIPVQDEVMPLNGESVNNSDIIEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFVGTH 316

Query: 301  NFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVA 122
            NFHNFTTRTKAEDPAA+R+IISF+ANT   VEG++FVKCEVVGQSFMLHQIRKM+GLAVA
Sbjct: 317  NFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVA 376

Query: 121  VMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            +MR  APESLI+ ALQ+DVN   PTAPEVGLYLDECFF+S
Sbjct: 377  IMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSS 416


>ref|XP_007154900.1| hypothetical protein PHAVU_003G157400g [Phaseolus vulgaris]
            gi|593783723|ref|XP_007154902.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028254|gb|ESW26894.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
            gi|561028256|gb|ESW26896.1| hypothetical protein
            PHAVU_003G157400g [Phaseolus vulgaris]
          Length = 586

 Score =  489 bits (1258), Expect = e-135
 Identities = 252/400 (63%), Positives = 305/400 (76%), Gaps = 26/400 (6%)
 Frame = -3

Query: 1123 KPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDWA 944
            K RYKRRKIAIF AYCGVGYQGMQKNPGAKTIE DLEEAL+ SG +PE DRG PKR+DWA
Sbjct: 47   KKRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALYVSGAVPEHDRGIPKRYDWA 106

Query: 943  RSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDRR 764
            RSARTDKGVSAVGQVVSGRFY+DPPG +DRLNS+L  QIR+FG+KRVT SF++KKFCDRR
Sbjct: 107  RSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLHSQIRIFGYKRVTGSFNAKKFCDRR 166

Query: 763  RYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRK-IIESKT 587
            RYVYLIPVFALD   H DRE+V+ASLGS NEL KCLEC +RGRKV+G++G RK  +E + 
Sbjct: 167  RYVYLIPVFALDPCCHRDRETVMASLGSTNELVKCLECSERGRKVVGLVGNRKHNLELEA 226

Query: 586  LEVD-----GIDVVAQTETT-EIESGFVLNNDGTENENVELESKA----------SGVEL 455
            ++V+       DVV  +  T ++E+     +D   N    +++K           +G+E 
Sbjct: 227  MDVEAGISSNTDVVLDSVVTGDVEASLSKGDDNHLNGESGIDNKGKVLVDGTNLKTGIEK 286

Query: 454  -------LAEIGGSEEVGSGLVQNS--NGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTH 302
                   +  + G     S +++    NG+ K+   S+F YGEKE+E+FN+IL  +VGTH
Sbjct: 287  GIPVQDEVMPLNGESVNNSDIIEEEKMNGEDKSTSGSMFCYGEKERERFNKILNCFVGTH 346

Query: 301  NFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVA 122
            NFHNFTTRTKAEDPAA+R+IISF+ANT   VEG++FVKCEVVGQSFMLHQIRKM+GLAVA
Sbjct: 347  NFHNFTTRTKAEDPAARRYIISFNANTAFAVEGIEFVKCEVVGQSFMLHQIRKMMGLAVA 406

Query: 121  VMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            +MR  APESLI+ ALQ+DVN   PTAPEVGLYLDECFF+S
Sbjct: 407  IMRNCAPESLINKALQQDVNINVPTAPEVGLYLDECFFSS 446


>ref|XP_007010013.1| Pseudouridine synthase [Theobroma cacao] gi|508726926|gb|EOY18823.1|
            Pseudouridine synthase [Theobroma cacao]
          Length = 507

 Score =  488 bits (1256), Expect = e-135
 Identities = 251/375 (66%), Positives = 284/375 (75%)
 Frame = -3

Query: 1126 RKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDW 947
            +K RYKRRKIAIF AYCGVGYQGMQKNPGAKTIE DLEEALF SG +PE DRGNPKR+DW
Sbjct: 51   KKQRYKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVPEQDRGNPKRYDW 110

Query: 946  ARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDR 767
            ARSARTDKGVSAVGQVVSGRFY+DPPG ++RLN  LP QIR+FG+KRVT SF+SKKFCDR
Sbjct: 111  ARSARTDKGVSAVGQVVSGRFYIDPPGLVERLNRILPAQIRIFGYKRVTASFNSKKFCDR 170

Query: 766  RRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKT 587
            RRYVYLIPVFALD + H DRESVLASLGS NEL KCLEC +RGRKV GVMGKR      T
Sbjct: 171  RRYVYLIPVFALDPSCHRDRESVLASLGSGNELVKCLECSERGRKVAGVMGKRSFEAKST 230

Query: 586  LEVDGIDVVAQTETTEIESGFVLNNDGTENENVELESKASGVELLAEIGGSEEVGSGLVQ 407
            +      V +   +   ESG V+      +E  E+   +   E               V 
Sbjct: 231  I------VHSDVSSNNGESGNVIKEHNLTSELEEVTDSSVQNEFTE------------VD 272

Query: 406  NSNGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRTKAEDPAAKRFIISFDA 227
              N +    ++  F YGE+EK  FNRIL  YVG+HNFHNFTTRTKAEDP+A+R+I+SF A
Sbjct: 273  KVNVEKIPLEERRFCYGEEEKGLFNRILKHYVGSHNFHNFTTRTKAEDPSARRYIVSFHA 332

Query: 226  NTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPT 47
            NTVVNVEG+DFVKCEVVGQSFMLHQIRKM+G+AVAVMR  APESLI+ AL+KDV+   PT
Sbjct: 333  NTVVNVEGIDFVKCEVVGQSFMLHQIRKMIGMAVAVMRNCAPESLIETALRKDVSINVPT 392

Query: 46   APEVGLYLDECFFTS 2
            APEVGLYLDEC F S
Sbjct: 393  APEVGLYLDECLFAS 407


>ref|XP_002307759.2| hypothetical protein POPTR_0005s26830g [Populus trichocarpa]
            gi|550339814|gb|EEE94755.2| hypothetical protein
            POPTR_0005s26830g [Populus trichocarpa]
          Length = 497

 Score =  484 bits (1247), Expect = e-134
 Identities = 247/380 (65%), Positives = 299/380 (78%), Gaps = 5/380 (1%)
 Frame = -3

Query: 1126 RKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPKRFDW 947
            +K RYKRRKIAIFL YCGVGYQGMQKNPGAKTIE DLEEALF +G +PE DRG PKR+DW
Sbjct: 47   KKQRYKRRKIAIFLTYCGVGYQGMQKNPGAKTIEGDLEEALFHAGAVPEHDRGIPKRYDW 106

Query: 946  ARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKKFCDR 767
            ARSARTDKGVSAVGQVVSGRFY+DPPG ++RL+S+L  QIR+FG+KRVT SF++KKFCDR
Sbjct: 107  ARSARTDKGVSAVGQVVSGRFYIDPPGLVERLHSNLSPQIRIFGYKRVTGSFNAKKFCDR 166

Query: 766  RRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKIIESKT 587
            RRYVYLIPVFAL+  +H DRESVLASLGS +EL KCL+C +RGRKV+G +GKR   ESK+
Sbjct: 167  RRYVYLIPVFALNPCSHRDRESVLASLGSGSELVKCLQCSERGRKVVGAVGKRS-FESKS 225

Query: 586  LEVDGIDVVAQTETTEIESGF-----VLNNDGTENENVELESKASGVELLAEIGGSEEVG 422
             +V   ++ +  + T ++S       + +N    N N E++      E++  I   ++  
Sbjct: 226  -DVSPTEIWSNDKDTTLKSEIKEEVSISSNSEDANANPEIKD-----EIMVSIENGDD-- 277

Query: 421  SGLVQNSNGDGKAGKKSVFSYGEKEKEKFNRILGRYVGTHNFHNFTTRTKAEDPAAKRFI 242
                +N+  + +A K S F YGEKEKE+FNRIL  Y+G+HNFHNFTTRTKAEDP+A+R+I
Sbjct: 278  ----KNTKSEEEAIKGSGFCYGEKEKERFNRILNYYLGSHNFHNFTTRTKAEDPSAQRYI 333

Query: 241  ISFDANTVVNVEGVDFVKCEVVGQSFMLHQIRKMVGLAVAVMRTGAPESLIDVALQKDVN 62
            ISFDA T V VEG++FVKCEVVGQSFMLHQIRKM+G+AVA+MR  A ESLI  ALQK+VN
Sbjct: 334  ISFDAKTTVAVEGIEFVKCEVVGQSFMLHQIRKMIGVAVAIMRNCASESLIQTALQKNVN 393

Query: 61   FTAPTAPEVGLYLDECFFTS 2
               PTAPEVGLYLDECFFTS
Sbjct: 394  INVPTAPEVGLYLDECFFTS 413


>ref|XP_006435279.1| hypothetical protein CICLE_v10000838mg [Citrus clementina]
            gi|557537401|gb|ESR48519.1| hypothetical protein
            CICLE_v10000838mg [Citrus clementina]
          Length = 526

 Score =  483 bits (1244), Expect = e-134
 Identities = 251/410 (61%), Positives = 299/410 (72%), Gaps = 31/410 (7%)
 Frame = -3

Query: 1138 NSIDRKPRYKRRKIAIFLAYCGVGYQGMQKNPGAKTIEADLEEALFQSGGIPEPDRGNPK 959
            +S  ++   KRRKIAIF AYCGVGYQGMQKNPGAKTIE DLEEALF SG + E DRGNP+
Sbjct: 49   DSTTKRQLCKRRKIAIFFAYCGVGYQGMQKNPGAKTIEGDLEEALFHSGAVSERDRGNPR 108

Query: 958  RFDWARSARTDKGVSAVGQVVSGRFYVDPPGFIDRLNSHLPDQIRVFGFKRVTNSFSSKK 779
            R+DWARSARTDKGVSAVGQVVSGRF +DPPG ++RLNS+LP QIR+FG+KRVT SF++KK
Sbjct: 109  RYDWARSARTDKGVSAVGQVVSGRFCIDPPGLVERLNSNLPTQIRIFGYKRVTASFNAKK 168

Query: 778  FCDRRRYVYLIPVFALDSNAHPDRESVLASLGSENELSKCLECPDRGRKVLGVMGKRKII 599
            FCD+RRYVYL+PVFALDS++H DRESV+ASLGS NEL KCLEC +RGRKV+GVMGKR   
Sbjct: 169  FCDQRRYVYLLPVFALDSSSHRDRESVMASLGSGNELVKCLECSERGRKVIGVMGKRTYQ 228

Query: 598  ESKTLEVDGIDVVAQTETTEIESGFVLNNDGTENENVELESKASGVELLAEIGGSEEVGS 419
                   +   + +Q +   + S    +   T  E+VE  +K     ++ E   SE V  
Sbjct: 229  LGLPSNDENASLNSQVKVDTVVSTCNGDRHNTNLESVE-SNKTISESVMVENANSESVNE 287

Query: 418  GLVQNS-------------------------------NGDGKAGKKSVFSYGEKEKEKFN 332
             LV++                                NG+ K  K S F YGE+EK++FN
Sbjct: 288  TLVESRTSETVQNENTDLSLDLDSKNDSKVMAEERSVNGEEKLLKGSGFCYGEEEKKRFN 347

Query: 331  RILGRYVGTHNFHNFTTRTKAEDPAAKRFIISFDANTVVNVEGVDFVKCEVVGQSFMLHQ 152
            RIL  YVG+HNFHNFTTRTKAEDP+A+R+IISF A++VVNVEG+DF+KCEVVGQSFMLHQ
Sbjct: 348  RILKHYVGSHNFHNFTTRTKAEDPSARRYIISFGADSVVNVEGIDFLKCEVVGQSFMLHQ 407

Query: 151  IRKMVGLAVAVMRTGAPESLIDVALQKDVNFTAPTAPEVGLYLDECFFTS 2
            IRKM+GLAVAV+R  APESLI+ ALQKDVN   PTAPEVGLYLDEC F S
Sbjct: 408  IRKMIGLAVAVVRNCAPESLIETALQKDVNINVPTAPEVGLYLDECIFAS 457