BLASTX nr result
ID: Papaver27_contig00030404
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00030404
(447 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II su... 66 2e-17
ref|XP_004303144.1| PREDICTED: DNA-directed RNA polymerase II su... 65 3e-17
ref|XP_007212150.1| hypothetical protein PRUPE_ppa012276mg [Prun... 65 3e-17
ref|XP_006424920.1| hypothetical protein CICLE_v10029380mg [Citr... 65 4e-17
ref|XP_004489626.1| PREDICTED: DNA-directed RNA polymerase II su... 65 4e-17
ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 ... 65 4e-17
gb|AFK39298.1| unknown [Lotus japonicus] 65 4e-17
ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypep... 65 4e-17
ref|XP_006424921.1| hypothetical protein CICLE_v10029380mg [Citr... 65 4e-17
ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Th... 65 5e-17
ref|XP_007016299.1| DNA-directed RNA polymerase II isoform 3 [Th... 65 5e-17
ref|XP_007016300.1| DNA-directed RNA polymerase II isoform 4 [Th... 65 5e-17
dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 7e-17
ref|XP_004240381.1| PREDICTED: DNA-directed RNA polymerase II su... 64 7e-17
ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II su... 64 7e-17
dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgar... 64 7e-17
ref|XP_002298912.1| DNA-directed RNA polymerase II 19 kDa polype... 64 9e-17
ref|XP_003608502.1| DNA-directed RNA polymerase II subunit RPB7 ... 64 9e-17
ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II su... 65 1e-16
ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II su... 66 2e-16
>ref|XP_004150740.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Cucumis sativus] gi|449518487|ref|XP_004166273.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Cucumis sativus]
Length = 176
Score = 65.9 bits (159), Expect(3) = 2e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDVPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 2e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 2e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_004303144.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Fragaria vesca subsp. vesca]
Length = 176
Score = 65.1 bits (157), Expect(3) = 3e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 45.1 bits (105), Expect(3) = 3e-17
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV+FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVSFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 3e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_007212150.1| hypothetical protein PRUPE_ppa012276mg [Prunus persica]
gi|462408015|gb|EMJ13349.1| hypothetical protein
PRUPE_ppa012276mg [Prunus persica]
Length = 176
Score = 65.1 bits (157), Expect(3) = 3e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 45.1 bits (105), Expect(3) = 3e-17
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV+FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVSFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 3e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_006424920.1| hypothetical protein CICLE_v10029380mg [Citrus clementina]
gi|568870408|ref|XP_006488396.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like [Citrus sinensis]
gi|557526854|gb|ESR38160.1| hypothetical protein
CICLE_v10029380mg [Citrus clementina]
Length = 176
Score = 65.1 bits (157), Expect(3) = 4e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 4e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 4e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_004489626.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Cicer
arietinum]
Length = 176
Score = 65.1 bits (157), Expect(3) = 4e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 4e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 4e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|NP_001236982.1| DNA-directed RNA polymerase II subunit RPB7 [Glycine max]
gi|356512183|ref|XP_003524800.1| PREDICTED: DNA-directed
RNA polymerase II subunit RPB7-like isoform X1 [Glycine
max] gi|502141876|ref|XP_004504682.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like [Cicer
arietinum] gi|571455285|ref|XP_006580040.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB7-like isoform
X2 [Glycine max] gi|593791778|ref|XP_007158928.1|
hypothetical protein PHAVU_002G193600g [Phaseolus
vulgaris] gi|593791780|ref|XP_007158929.1| hypothetical
protein PHAVU_002G193600g [Phaseolus vulgaris]
gi|593791782|ref|XP_007158930.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|1173137|sp|P46279.1|RPB7_SOYBN RecName:
Full=DNA-directed RNA polymerase II subunit RPB7;
Short=RNA polymerase II subunit B7
gi|170052|gb|AAA34005.1| RNA polymerase II [Glycine max]
gi|255626843|gb|ACU13766.1| unknown [Glycine max]
gi|558695762|gb|AHA84235.1| DNA-directed RNA polymerase
II subunit RPB7 [Phaseolus vulgaris]
gi|561032343|gb|ESW30922.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|561032344|gb|ESW30923.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
gi|561032345|gb|ESW30924.1| hypothetical protein
PHAVU_002G193600g [Phaseolus vulgaris]
Length = 176
Score = 65.1 bits (157), Expect(3) = 4e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 4e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 4e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>gb|AFK39298.1| unknown [Lotus japonicus]
Length = 176
Score = 65.1 bits (157), Expect(3) = 4e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 4e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 4e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
[Ricinus communis] gi|223540340|gb|EEF41911.1|
DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
putative [Ricinus communis]
Length = 176
Score = 65.1 bits (157), Expect(3) = 4e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 4e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 4e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_006424921.1| hypothetical protein CICLE_v10029380mg [Citrus clementina]
gi|557526855|gb|ESR38161.1| hypothetical protein
CICLE_v10029380mg [Citrus clementina]
Length = 159
Score = 65.1 bits (157), Expect(3) = 4e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 4e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 4e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_007016297.1| DNA-directed RNA polymerase II isoform 1 [Theobroma cacao]
gi|508786660|gb|EOY33916.1| DNA-directed RNA polymerase
II isoform 1 [Theobroma cacao]
Length = 176
Score = 65.1 bits (157), Expect(3) = 5e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.3 bits (103), Expect(3) = 5e-17
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK +LEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEVLEA 87
Score = 23.5 bits (49), Expect(3) = 5e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_007016299.1| DNA-directed RNA polymerase II isoform 3 [Theobroma cacao]
gi|508786662|gb|EOY33918.1| DNA-directed RNA polymerase
II isoform 3 [Theobroma cacao]
Length = 173
Score = 65.1 bits (157), Expect(3) = 5e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 113 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 149
Score = 44.3 bits (103), Expect(3) = 5e-17
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK +LEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEVLEA 87
Score = 23.5 bits (49), Expect(3) = 5e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_007016300.1| DNA-directed RNA polymerase II isoform 4 [Theobroma cacao]
gi|508786663|gb|EOY33919.1| DNA-directed RNA polymerase
II isoform 4 [Theobroma cacao]
Length = 157
Score = 65.1 bits (157), Expect(3) = 5e-17
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.3 bits (103), Expect(3) = 5e-17
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK +LEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEVLEA 87
Score = 23.5 bits (49), Expect(3) = 5e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 236
Score = 64.3 bits (155), Expect(3) = 7e-17
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQK+SEVR+K IG RVD
Sbjct: 175 DMEFQSGDVPNYTTSDG---SVKIQKESEVRLKIIGTRVD 211
Score = 44.7 bits (104), Expect(3) = 7e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 123 GFVTFPVKYQCVVFRPFKGEILEA 146
Score = 23.5 bits (49), Expect(3) = 7e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 89 LMKDVEGTC 97
>ref|XP_004240381.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Solanum lycopersicum] gi|565385656|ref|XP_006358706.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Solanum tuberosum]
Length = 177
Score = 64.3 bits (155), Expect(3) = 7e-17
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQK+SEVR+K IG RVD
Sbjct: 116 DMEFQSGDVPNYTTSDG---SVKIQKESEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 7e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 7e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_003568492.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Brachypodium distachyon]
Length = 177
Score = 64.3 bits (155), Expect(3) = 7e-17
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQK+SEVR+K IG RVD
Sbjct: 116 DMEFQSGDVPNYTTSDG---SVKIQKESEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 7e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 7e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505504|dbj|BAJ95423.1| predicted protein [Hordeum
vulgare subsp. vulgare] gi|475564192|gb|EMT14471.1|
DNA-directed RNA polymerase II subunit RPB7 [Aegilops
tauschii]
Length = 177
Score = 64.3 bits (155), Expect(3) = 7e-17
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQK+SEVR+K IG RVD
Sbjct: 116 DMEFQSGDVPNYTTSDG---SVKIQKESEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 7e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 7e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_002298912.1| DNA-directed RNA polymerase II 19 kDa polypeptide family protein
[Populus trichocarpa] gi|222846170|gb|EEE83717.1|
DNA-directed RNA polymerase II 19 kDa polypeptide family
protein [Populus trichocarpa]
Length = 176
Score = 63.9 bits (154), Expect(3) = 9e-17
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQ+GD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQTGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 9e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 9e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_003608502.1| DNA-directed RNA polymerase II subunit RPB7 [Medicago truncatula]
gi|217071674|gb|ACJ84197.1| unknown [Medicago
truncatula] gi|355509557|gb|AES90699.1| DNA-directed RNA
polymerase II subunit RPB7 [Medicago truncatula]
gi|388514911|gb|AFK45517.1| unknown [Medicago
truncatula]
Length = 176
Score = 63.9 bits (154), Expect(3) = 9e-17
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQ+GD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQTGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 9e-17
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 23.5 bits (49), Expect(3) = 9e-17
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
LMKDVEGTC
Sbjct: 30 LMKDVEGTC 38
>ref|XP_002282298.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
vinifera] gi|147841138|emb|CAN75204.1| hypothetical
protein VITISV_042914 [Vitis vinifera]
gi|297745997|emb|CBI16053.3| unnamed protein product
[Vitis vinifera]
Length = 176
Score = 65.1 bits (157), Expect(3) = 1e-16
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDMPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 44.7 bits (104), Expect(3) = 1e-16
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
GFV FPVKY CVVFRPFK ILEA
Sbjct: 64 GFVTFPVKYQCVVFRPFKGEILEA 87
Score = 21.9 bits (45), Expect(3) = 1e-16
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
L+KDVEGTC
Sbjct: 30 LVKDVEGTC 38
>ref|XP_006654370.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like [Oryza
brachyantha]
Length = 177
Score = 65.9 bits (159), Expect(3) = 2e-16
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -1
Query: 345 DMEFQSGDIPNYTTSDGSVTSVKIQKDSEVRVKTIGNRVD 226
DMEFQSGD+PNYTTSDG SVKIQKDSEVR+K IG RVD
Sbjct: 116 DMEFQSGDVPNYTTSDG---SVKIQKDSEVRLKIIGTRVD 152
Score = 43.5 bits (101), Expect(3) = 2e-16
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = -3
Query: 418 GFVAFPVKYDCVVFRPFKWGILEA 347
G+V FPVKY CVVFRPFK ILEA
Sbjct: 64 GYVTFPVKYQCVVFRPFKGEILEA 87
Score = 21.9 bits (45), Expect(3) = 2e-16
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2
Query: 446 LMKDVEGTC 420
L+KDVEGTC
Sbjct: 30 LIKDVEGTC 38