BLASTX nr result

ID: Papaver27_contig00030231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00030231
         (2876 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam...    60   4e-06
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677...    60   4e-06

>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
            42.57) [Arabidopsis thaliana]
          Length = 1662

 Score = 60.5 bits (145), Expect = 4e-06
 Identities = 45/153 (29%), Positives = 71/153 (46%)
 Frame = +1

Query: 2416 TKSHLRNLITKHKPDLIFLQETKHHESYXXXXXXXXQYLDMIVVNPTGMAGTVGGIVLAW 2595
            T+S L NL    K D++FL ET +             + ++I   P G +G   G+ L W
Sbjct: 397  TQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSG---GLALLW 453

Query: 2596 FVKIDLQFIHNFDNQIDVLILDKIRKFDSMLSVVYACPYKMKKHVSCIYFNDLARTV*TP 2775
               + L  ++  D  IDV I   I   +  LS VY  P + ++H    +F +L++T   P
Sbjct: 454  KDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHFENLSKTRNDP 511

Query: 2776 WLVL*YLNFVLIESEKRGGKRIDPCETNFFSQM 2874
            W+++   N +L  +EK GG + D      F  M
Sbjct: 512  WILIGDFNEILSNNEKIGGPQRDEWTFRGFRNM 544


>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
            putative protein [Arabidopsis thaliana]
          Length = 1294

 Score = 60.5 bits (145), Expect = 4e-06
 Identities = 45/153 (29%), Positives = 71/153 (46%)
 Frame = +1

Query: 2416 TKSHLRNLITKHKPDLIFLQETKHHESYXXXXXXXXQYLDMIVVNPTGMAGTVGGIVLAW 2595
            T+S L NL    K D++FL ET +             + ++I   P G +G   G+ L W
Sbjct: 377  TQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSG---GLALLW 433

Query: 2596 FVKIDLQFIHNFDNQIDVLILDKIRKFDSMLSVVYACPYKMKKHVSCIYFNDLARTV*TP 2775
               + L  ++  D  IDV I   I   +  LS VY  P + ++H    +F +L++T   P
Sbjct: 434  KDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHFENLSKTRNDP 491

Query: 2776 WLVL*YLNFVLIESEKRGGKRIDPCETNFFSQM 2874
            W+++   N +L  +EK GG + D      F  M
Sbjct: 492  WILIGDFNEILSNNEKIGGPQRDEWTFRGFRNM 524


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