BLASTX nr result
ID: Papaver27_contig00030231
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver27_contig00030231 (2876 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 60 4e-06 emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 60 4e-06 >gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score: 42.57) [Arabidopsis thaliana] Length = 1662 Score = 60.5 bits (145), Expect = 4e-06 Identities = 45/153 (29%), Positives = 71/153 (46%) Frame = +1 Query: 2416 TKSHLRNLITKHKPDLIFLQETKHHESYXXXXXXXXQYLDMIVVNPTGMAGTVGGIVLAW 2595 T+S L NL K D++FL ET + + ++I P G +G G+ L W Sbjct: 397 TQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSG---GLALLW 453 Query: 2596 FVKIDLQFIHNFDNQIDVLILDKIRKFDSMLSVVYACPYKMKKHVSCIYFNDLARTV*TP 2775 + L ++ D IDV I I + LS VY P + ++H +F +L++T P Sbjct: 454 KDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHFENLSKTRNDP 511 Query: 2776 WLVL*YLNFVLIESEKRGGKRIDPCETNFFSQM 2874 W+++ N +L +EK GG + D F M Sbjct: 512 WILIGDFNEILSNNEKIGGPQRDEWTFRGFRNM 544 >emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1| putative protein [Arabidopsis thaliana] Length = 1294 Score = 60.5 bits (145), Expect = 4e-06 Identities = 45/153 (29%), Positives = 71/153 (46%) Frame = +1 Query: 2416 TKSHLRNLITKHKPDLIFLQETKHHESYXXXXXXXXQYLDMIVVNPTGMAGTVGGIVLAW 2595 T+S L NL K D++FL ET + + ++I P G +G G+ L W Sbjct: 377 TQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSG---GLALLW 433 Query: 2596 FVKIDLQFIHNFDNQIDVLILDKIRKFDSMLSVVYACPYKMKKHVSCIYFNDLARTV*TP 2775 + L ++ D IDV I I + LS VY P + ++H +F +L++T P Sbjct: 434 KDSVRLSNLYQDDRHIDVHI--SINNINFYLSRVYGHPCQSERHSLWTHFENLSKTRNDP 491 Query: 2776 WLVL*YLNFVLIESEKRGGKRIDPCETNFFSQM 2874 W+++ N +L +EK GG + D F M Sbjct: 492 WILIGDFNEILSNNEKIGGPQRDEWTFRGFRNM 524