BLASTX nr result

ID: Papaver27_contig00029414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00029414
         (896 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   216   7e-54
emb|CBI35920.3| unnamed protein product [Vitis vinifera]              210   5e-52
ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221...   202   2e-49
ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616...   193   9e-47
ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citr...   193   9e-47
ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49,...   192   1e-46
ref|XP_004240985.1| PREDICTED: uncharacterized protein LOC101267...   192   1e-46
ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypep...   187   6e-45
ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603...   186   8e-45
ref|XP_004487983.1| PREDICTED: uncharacterized protein LOC101507...   186   8e-45
ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I sub...   184   5e-44
gb|EXB29690.1| DNA-directed RNA polymerase I subunit rpa49 [Moru...   182   1e-43
ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citr...   182   2e-43
ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 ...   182   2e-43
ref|XP_003595057.1| DNA-directed RNA polymerase I subunit rpa49 ...   182   2e-43
ref|XP_006407147.1| hypothetical protein EUTSA_v10020760mg [Eutr...   181   3e-43
ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 ...   179   2e-42
ref|XP_006369274.1| hypothetical protein POPTR_0001s20580g [Popu...   178   2e-42
ref|XP_007138779.1| hypothetical protein PHAVU_009G236700g [Phas...   177   4e-42
ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prun...   177   4e-42

>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Vitis
           vinifera]
          Length = 421

 Score =  216 bits (551), Expect = 7e-54
 Identities = 125/277 (45%), Positives = 171/277 (61%), Gaps = 5/277 (1%)
 Frame = +2

Query: 80  QELEMELEDYSLXXXXXXXXXXXQPIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDD 259
           +E E E+   +L           + +++K+E+V E+ EKI PLVGYFP+G+DPHK    +
Sbjct: 2   EEEEPEISSQTLTLTPTKKRKKKKHVNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHE 61

Query: 260 GNGDD-VKVYRH-VRRSRLELVVKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQT 433
            +    VKV+R+  R +RL+LVV P  SKVNFVGT+YSGEA +   C YALGV DKETQT
Sbjct: 62  SDPPPAVKVFRNKARANRLQLVVSPNDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQT 121

Query: 434 LKIVKIESNKIFRLEPKFAGKDKAPDEAK---VEALTAQERAERLNDLTMALGTKKAKKQ 604
           LKIV I SNKIFRLEP+  G D + DE         TA+E+A R+ DLT   GTKK+  Q
Sbjct: 122 LKIVPIASNKIFRLEPRVGGSDASVDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQ 181

Query: 605 VREKANLNRKENEETQKQMGEKIKKLKVLANATAGDNSEPARNIPYHDTTAETPERAYPI 784
            ++   LN+K++  +QK +  K+K++ +   A    ++  ARNIP +D TA TP+ AY +
Sbjct: 182 AKKLQALNQKDDPRSQKDLDRKLKEVVINKEALESTSAHSARNIPPYDDTATTPQEAYRL 241

Query: 785 EKIISKGENEILQKALHYLFYTEKVALEAFPIFVRNR 895
           +KII KGE + L   L  L    +V   A+  FV NR
Sbjct: 242 DKIIFKGEWDYLLDILDLLQAGVEVESSAYSSFVCNR 278


>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  210 bits (535), Expect = 5e-52
 Identities = 120/248 (48%), Positives = 159/248 (64%), Gaps = 5/248 (2%)
 Frame = +2

Query: 167 IEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDD-VKVYRH-VRRSRLELVVKPKGSK 340
           +E+V E+ EKI PLVGYFP+G+DPHK    + +    VKV+R+  R +RL+LVV P  SK
Sbjct: 1   MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRNKARANRLQLVVSPNDSK 60

Query: 341 VNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKDKAPDEAK 520
           VNFVGT+YSGEA +   C YALGV DKETQTLKIV I SNKIFRLEP+  G D + DE  
Sbjct: 61  VNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASVDEPS 120

Query: 521 ---VEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIKKLKVL 691
                  TA+E+A R+ DLT   GTKK+  Q ++   LN+K++  +QK +  K+K++ + 
Sbjct: 121 SLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLKEVVIN 180

Query: 692 ANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVALEA 871
             A    ++  ARNIP +D TA TP+ AY ++KII KGE + L   L  L    +V   A
Sbjct: 181 KEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEVESSA 240

Query: 872 FPIFVRNR 895
           +  FV NR
Sbjct: 241 YSSFVCNR 248


>ref|XP_004141689.1| PREDICTED: uncharacterized protein LOC101221697 [Cucumis sativus]
           gi|449480549|ref|XP_004155927.1| PREDICTED:
           uncharacterized protein LOC101224839 [Cucumis sativus]
          Length = 435

 Score =  202 bits (513), Expect = 2e-49
 Identities = 112/253 (44%), Positives = 161/253 (63%), Gaps = 6/253 (2%)
 Frame = +2

Query: 155 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKA-QDDGNGDDVKVYRHVRR-SRLELVVKP 328
           +D KI+++    +K  P+VGYFP+G+DPHK A ++       +VY+H  R +R++LVV P
Sbjct: 41  MDAKIQVLSNQPQKTPPVVGYFPSGFDPHKDADKEQSRSVRARVYKHKNRPNRMQLVVSP 100

Query: 329 KGSKVNFVGTNYSGEAEAPIS-CQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKDKA 505
            GS V+FVGTNY GEA A    C YALGV DK TQ+LKIV I SN IFRL+PK  G D  
Sbjct: 101 TGSNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMIFRLDPKVRGSDVT 160

Query: 506 PDEAKV---EALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIK 676
            +E+     E L+ Q++A R+ +LT   GTKK+KKQ ++   L ++++ ET+  +  ++K
Sbjct: 161 ENESPSVANEELSGQDKANRMRELTALYGTKKSKKQAQKLHALKQEDDPETKSDLDGRMK 220

Query: 677 KLKVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEK 856
            + V   A  G  +E ARNIP ++ +A TP+ AYP++KII KGE   L+     L  T +
Sbjct: 221 NVVVNKEALEGTQAEVARNIPAYNASATTPQEAYPLDKIILKGEWSFLEDLYFRLQETAE 280

Query: 857 VALEAFPIFVRNR 895
           ++   +P FVRNR
Sbjct: 281 IS-ATYPSFVRNR 292


>ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616137 [Citrus sinensis]
          Length = 447

 Score =  193 bits (490), Expect = 9e-47
 Identities = 103/252 (40%), Positives = 153/252 (60%), Gaps = 5/252 (1%)
 Frame = +2

Query: 155 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRHV-----RRSRLELV 319
           +  K++ + E   K  PLVGYFP+ Y P     D+     V+VYR++     R  R+ELV
Sbjct: 53  VKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELV 112

Query: 320 VKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD 499
           V P+ S V++VGT+YSGEA AP  C YA+GV D+ TQTLKIV I +NKIFRLEP+  G D
Sbjct: 113 VSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRSTQTLKIVPIAANKIFRLEPRVRGSD 172

Query: 500 KAPDEAKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIKK 679
            A  +A    ++A+ +A     L    GTKK+ +Q ++   LN++ + E+QK +  K+K 
Sbjct: 173 VADKDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKS 232

Query: 680 LKVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKV 859
           +K+   A     S+   N+P +D  A TP++AYP++KII KGE + +Q   +++    +V
Sbjct: 233 VKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAGSEV 292

Query: 860 ALEAFPIFVRNR 895
             +A+P FV NR
Sbjct: 293 ISDAYPSFVCNR 304


>ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
           gi|557528587|gb|ESR39837.1| hypothetical protein
           CICLE_v10025597mg [Citrus clementina]
          Length = 447

 Score =  193 bits (490), Expect = 9e-47
 Identities = 103/252 (40%), Positives = 153/252 (60%), Gaps = 5/252 (1%)
 Frame = +2

Query: 155 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRHV-----RRSRLELV 319
           +  K++ + E   K  PLVGYFP+ Y P     D+     V+VYR++     R  R+ELV
Sbjct: 53  VKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELV 112

Query: 320 VKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD 499
           V P+ S V++VGT+YSGEA AP  C YA+GV D+ TQTLKIV I +NKIFRLEP+  G D
Sbjct: 113 VSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRLEPRVRGSD 172

Query: 500 KAPDEAKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIKK 679
            A  +A    ++A+ +A     L    GTKK+ +Q ++   LN++ + E+QK +  K+K 
Sbjct: 173 VADKDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKS 232

Query: 680 LKVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKV 859
           +K+   A     S+   N+P +D  A TP++AYP++KII KGE + +Q   +++    +V
Sbjct: 233 VKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHVSAGSEV 292

Query: 860 ALEAFPIFVRNR 895
             +A+P FV NR
Sbjct: 293 ISDAYPSFVCNR 304


>ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
           cacao] gi|508776735|gb|EOY23991.1| DNA-directed RNA
           polymerase I subunit rpa49, putative [Theobroma cacao]
          Length = 457

 Score =  192 bits (489), Expect = 1e-46
 Identities = 109/268 (40%), Positives = 164/268 (61%), Gaps = 23/268 (8%)
 Frame = +2

Query: 161 LKIEMVKENQEKIAPLVGYFPTGYDPHK----------KAQDDGNGDD-------VKVYR 289
           +KI++ ++   KI PLV YFP+GY+P K          + +++  G D       VKVYR
Sbjct: 45  VKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEEEEEEEGPDNKSNQPRVKVYR 104

Query: 290 HV---RRSRLELVVKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESN 460
           ++   + +RL++VV P GS V+FVG+NYSGEA A   C+Y+LGV D+ET+TLKI+ I SN
Sbjct: 105 NMAQRKTNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCRYSLGVLDRETRTLKIIPIASN 164

Query: 461 KIFRLEPKFAGKDKAPDEAKVEA---LTAQERAERLNDLTMALGTKKAKKQVREKANLNR 631
           KIFRLEP+    + A  +        LT +++ +++ +LT   GTKK +K+ ++  NL +
Sbjct: 165 KIFRLEPRVRSSETANKDVSSSVKSELTTEDKEDKMGELTALYGTKKDRKKRKDLNNLKK 224

Query: 632 KENEETQKQMGEKIKKLKVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGEN 811
           + + E+QK + EKI+++     A    ++  ARNIP HD++A TP  AYP++KII KG+ 
Sbjct: 225 EVDPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDSSATTPVEAYPLDKIILKGDW 284

Query: 812 EILQKALHYLFYTEKVALEAFPIFVRNR 895
           E L      L    +VA  A+P FV NR
Sbjct: 285 EFLGDIYGLLEVGAEVASNAYPTFVCNR 312


>ref|XP_004240985.1| PREDICTED: uncharacterized protein LOC101267531 [Solanum
           lycopersicum]
          Length = 410

 Score =  192 bits (488), Expect = 1e-46
 Identities = 110/250 (44%), Positives = 155/250 (62%), Gaps = 7/250 (2%)
 Frame = +2

Query: 167 IEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRHVRRS-RLELVVKPKGSKV 343
           +E + EN   I+P+VGYFP+GYDP +   D       K+YR+VRR+ RL++VV P GS+V
Sbjct: 21  METIAENPNNISPMVGYFPSGYDPLRNTNDGVEELSTKLYRNVRRNNRLQVVVSPYGSQV 80

Query: 344 NFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD----KAPD 511
           +FVGTNYSGEA +   C Y+LG+ DKETQTLKIV I +NKI RLEP+  G +    + PD
Sbjct: 81  DFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGSEVPDAEDPD 140

Query: 512 EAKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIKKL--K 685
            AK E LTA+ER +++ +LT    +KK+ +Q R+  +L ++E+   Q++    I     K
Sbjct: 141 TAKQE-LTAEERNDKMRELTQMYSSKKSIRQARKLDSLRQQEDTGNQEEFDRNIAGAINK 199

Query: 686 VLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVAL 865
                T   +S  ARNIP HD  A  P+ AYP+++IISKGE + L           ++  
Sbjct: 200 EALEVTVATDS--ARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGAEMTP 257

Query: 866 EAFPIFVRNR 895
           + +P FVRNR
Sbjct: 258 DLYPSFVRNR 267


>ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus
           communis] gi|223539445|gb|EEF41035.1| DNA-directed RNA
           polymerase I 49 kDa polypeptide, putative [Ricinus
           communis]
          Length = 481

 Score =  187 bits (474), Expect = 6e-45
 Identities = 111/282 (39%), Positives = 156/282 (55%), Gaps = 34/282 (12%)
 Frame = +2

Query: 152 PIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGD--------------DVKVYR 289
           P+++KIE++ +  +K  P+VGYFP+GY P K  + +   D               VK YR
Sbjct: 57  PLNVKIEVIYDQTDKTPPIVGYFPSGYKPSKHNESNNLHDTSNEENATSSLSQPSVKFYR 116

Query: 290 HVRRS-----------------RLELVVKPKGSKVNFVGTNYSGEAEAPISCQYALGVFD 418
           + +R+                 R+ELVV P GS V+FVG +Y GEA A   C YALGV D
Sbjct: 117 NAQRTKIEKSSNERNEKWRSSERMELVVSPNGSNVDFVGKSYKGEATAAQLCTYALGVLD 176

Query: 419 KETQTLKIVKIESNKIFRLEPKFAG---KDKAPDEAKVEALTAQERAERLNDLTMALGTK 589
           K+T+TLKI+ I  NKIFRLEPK  G    DK P   + E L+ +  A R   LT   GTK
Sbjct: 177 KKTKTLKIMPIAGNKIFRLEPKIQGVDASDKEPSVLENEDLSKENMAVRKKTLTDTYGTK 236

Query: 590 KAKKQVREKANLNRKENEETQKQMGEKIKKLKVLANATAGDNSEPARNIPYHDTTAETPE 769
           K+  Q +    + + +N E++K + +KI  + V   A    ++  ARNIP H+T+A TP+
Sbjct: 237 KSITQGKRMEIMMQGDNPESRKDLDQKIDNVVVNKAALEDTSAHVARNIPPHNTSATTPQ 296

Query: 770 RAYPIEKIISKGENEILQKALHYLFYTEKVALEAFPIFVRNR 895
            AYP+ +II  GE + L+     L   E  A+ A+P+FVRNR
Sbjct: 297 EAYPLGRIILTGEWDYLEDLYEILQAGEGAAINAYPVFVRNR 338


>ref|XP_006350715.1| PREDICTED: uncharacterized protein LOC102603859 [Solanum tuberosum]
          Length = 431

 Score =  186 bits (473), Expect = 8e-45
 Identities = 109/251 (43%), Positives = 153/251 (60%), Gaps = 8/251 (3%)
 Frame = +2

Query: 167 IEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRHVRRS-RLELVVKPKGSKV 343
           +E + EN   I+P+VGYFP+GYDP     D       K+YR+ +R+ RL+LVV P GS+V
Sbjct: 42  METIAENPNNISPIVGYFPSGYDPLTNNNDGVEELSTKLYRNAKRNNRLQLVVSPNGSQV 101

Query: 344 NFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAG----KDKAPD 511
           +FVGTNYSGEA +   C Y+LG+ DKETQTLKIV I +NKI RLEP+  G    + + PD
Sbjct: 102 DFVGTNYSGEATSAQLCTYSLGILDKETQTLKIVPIAANKIIRLEPRVRGLEAQETEDPD 161

Query: 512 EAKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIK---KL 682
            AK E LTA+ER +++ +LT    +KK  +Q R+  +L ++E+   Q++    I      
Sbjct: 162 TAKQE-LTAEERNDKMRELTQKYSSKKTIRQARKLDSLRQQEDTGNQEEFDRNIAGAINK 220

Query: 683 KVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVA 862
           + L  A A D+   ARNIP HD  A  P+ AYP+++IISKGE + L           ++ 
Sbjct: 221 EALEVAVATDS---ARNIPPHDLDATIPQLAYPLDRIISKGEWDFLLDIFELTEAGAEMT 277

Query: 863 LEAFPIFVRNR 895
            + +P FV NR
Sbjct: 278 PDLYPSFVCNR 288


>ref|XP_004487983.1| PREDICTED: uncharacterized protein LOC101507754 [Cicer arietinum]
          Length = 418

 Score =  186 bits (473), Expect = 8e-45
 Identities = 104/254 (40%), Positives = 151/254 (59%), Gaps = 5/254 (1%)
 Frame = +2

Query: 149 QPIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRHVRRS-RLELVVK 325
           +P+  K+++V+EN  KI P +GYFP+G+DP K           +VYR+   + RLELVV 
Sbjct: 24  EPVQAKVKVVRENPNKIPPYIGYFPSGFDPVKSTSVSAG---FQVYRNKNMTKRLELVVS 80

Query: 326 PKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD-- 499
           P GS V+FVGTNY GEA       YALGVFDKE+QTLK+V I +NKIFRL+PK  G +  
Sbjct: 81  PAGSSVDFVGTNYMGEATGSHRSMYALGVFDKESQTLKVVPIGANKIFRLDPKVKGVEYN 140

Query: 500 --KAPDEAKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKI 673
             K      VE L+ ++ A +    T  LGTK+  +   +  ++ + +  E++K + EK+
Sbjct: 141 LYKESANGTVEELSPEQTAAKRRHSTAVLGTKRHIESTNKILDMRKDDEPESKKNLVEKM 200

Query: 674 KKLKVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTE 853
           K + V   A A   +  +RNIP +DT+A TP+ AY +++II + E   L+   + L   E
Sbjct: 201 KNVVVNEAALANTEATVSRNIPPYDTSATTPQEAYVLDRIILEREWSYLEDIYYILEQGE 260

Query: 854 KVALEAFPIFVRNR 895
                A+PIF+RNR
Sbjct: 261 AANFSAYPIFIRNR 274


>ref|XP_003546428.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like
           [Glycine max]
          Length = 424

 Score =  184 bits (466), Expect = 5e-44
 Identities = 103/250 (41%), Positives = 149/250 (59%), Gaps = 1/250 (0%)
 Frame = +2

Query: 149 QPIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRHVRR-SRLELVVK 325
           + I++++E+V+E+  K  P+VGYFP+G+DP K     G   + +VYRH     RLELVV+
Sbjct: 34  EQIEVEVEVVREHPNKTPPVVGYFPSGFDPVKN--HGGGPSNFQVYRHRSMPKRLELVVR 91

Query: 326 PKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKDKA 505
           P  S V FVGT+Y+GEA A    +YALGV DKE  TLK+V I  NKIFRLEPK  G    
Sbjct: 92  PPRSSVEFVGTSYAGEAAARHRAKYALGVLDKEAGTLKVVPIAGNKIFRLEPKVKGVGAF 151

Query: 506 PDEAKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIKKLK 685
            +E     L    + ++  + T   GTKK  ++ ++K  L + E+ ++Q+ +  K+K + 
Sbjct: 152 ENEPANSTLEEMTQQQKFAETTSIWGTKKDIEKAKKKLALRQDEDPDSQRNLDVKMKSVT 211

Query: 686 VLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVAL 865
           V   A     S  +RNIP +D +A TP+ AY ++KII KGE + L+   + L   E+   
Sbjct: 212 VNKKALESTESHVSRNIPPYDASATTPQEAYILDKIILKGEWDYLEDIYNNLQRGEEADF 271

Query: 866 EAFPIFVRNR 895
            A+P FVRNR
Sbjct: 272 SAYPTFVRNR 281


>gb|EXB29690.1| DNA-directed RNA polymerase I subunit rpa49 [Morus notabilis]
          Length = 438

 Score =  182 bits (463), Expect = 1e-43
 Identities = 104/252 (41%), Positives = 150/252 (59%), Gaps = 5/252 (1%)
 Frame = +2

Query: 155 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRHVRR-SRLELVVKPK 331
           ++  I++V+   E+  PLVGYFP+G+DP     +       +V+R+  +  RL+LVV P 
Sbjct: 43  VEATIQVVQNQPERAPPLVGYFPSGFDPKDGDDESSATAMARVFRNRNKPKRLQLVVSPN 102

Query: 332 GSKVNFVGTNYSGEAEAPIS-CQYALGVFDKETQTLKIVKIESNKIFRLEPKFAG---KD 499
           G+ V+FVGTNYSGEAEA    C YALGV DKETQTLKIV I SNKIFRLEPK  G    +
Sbjct: 103 GANVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVRGLRLPN 162

Query: 500 KAPDEAKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIKK 679
           K          +A  ++E++  LT   GT K+ ++ +++  L + ++ ETQK M EKIK+
Sbjct: 163 KDSGSLAEGERSALSKSEKIKGLTDRYGTNKSIREAKKRDALYQNDDPETQKDMDEKIKQ 222

Query: 680 LKVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKV 859
           + +  +A         RNIP ++  A + + AYPIEKII KGE + L+     L    ++
Sbjct: 223 IVIKKDALESTQVHTDRNIPPYNAAATSSQEAYPIEKIILKGEWDFLEDIYRLLQEEAEL 282

Query: 860 ALEAFPIFVRNR 895
             + +P F+ NR
Sbjct: 283 KSDDYPSFISNR 294


>ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
           gi|557528588|gb|ESR39838.1| hypothetical protein
           CICLE_v10025597mg [Citrus clementina]
          Length = 426

 Score =  182 bits (462), Expect = 2e-43
 Identities = 96/234 (41%), Positives = 143/234 (61%), Gaps = 5/234 (2%)
 Frame = +2

Query: 155 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRHV-----RRSRLELV 319
           +  K++ + E   K  PLVGYFP+ Y P     D+     V+VYR++     R  R+ELV
Sbjct: 53  VKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKNRTGRMELV 112

Query: 320 VKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD 499
           V P+ S V++VGT+YSGEA AP  C YA+GV D+ TQTLKIV I +NKIFRLEP+  G D
Sbjct: 113 VSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRLEPRVRGSD 172

Query: 500 KAPDEAKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIKK 679
            A  +A    ++A+ +A     L    GTKK+ +Q ++   LN++ + E+QK +  K+K 
Sbjct: 173 VADKDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQKDLALKMKS 232

Query: 680 LKVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYL 841
           +K+   A     S+   N+P +D  A TP++AYP++KII KGE + +Q   +++
Sbjct: 233 VKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFNHV 286


>ref|XP_003595058.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355484106|gb|AES65309.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 411

 Score =  182 bits (462), Expect = 2e-43
 Identities = 108/256 (42%), Positives = 150/256 (58%), Gaps = 7/256 (2%)
 Frame = +2

Query: 149 QPIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRH-VRRSRLELVVK 325
           +P+  KIE+V  +  K+ P +GYF +G+DP K +    +G DV+VYR+ V   R ELVV 
Sbjct: 12  EPVQAKIEVVSSDPSKMPPFIGYFTSGFDPVKSS----SGTDVQVYRNKVMHKRTELVVS 67

Query: 326 PKGSKVNFVGTNYSGEAEAPIS--CQYALGVFDKETQTLKIVKIESNKIFRLEPKFAG-- 493
           P GS V FVGT+Y GEA A       Y LGVFDKE+QTLKIV I  NKIFRLEP+  G  
Sbjct: 68  PAGSSVEFVGTSYEGEAVAAARNPATYMLGVFDKESQTLKIVPIGGNKIFRLEPRVKGVE 127

Query: 494 -KDKAPDEAK-VEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGE 667
            K+  P   K VE +TA++ AE+  +   ALGTK++ K     A++   E  E +K + E
Sbjct: 128 YKEPPPTPIKMVEEMTAEQLAEKKRNTDAALGTKRSNKMHSRLADMRGDEEPEAKKNLDE 187

Query: 668 KIKKLKVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFY 847
           K+K ++V   A A   +   R+IP ++++A TP+ AY ++KII   E   LQ   + L  
Sbjct: 188 KMKNVEVKETALANTEAHVTRHIPPYNSSATTPQEAYVLDKIILAEEWNYLQDIYYSLQK 247

Query: 848 TEKVALEAFPIFVRNR 895
                   +P F+RNR
Sbjct: 248 EVAADFSLYPSFIRNR 263


>ref|XP_003595057.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|217073572|gb|ACJ85146.1| unknown [Medicago
           truncatula] gi|355484105|gb|AES65308.1| DNA-directed RNA
           polymerase I subunit rpa49 [Medicago truncatula]
           gi|388522465|gb|AFK49294.1| unknown [Medicago
           truncatula]
          Length = 428

 Score =  182 bits (462), Expect = 2e-43
 Identities = 108/256 (42%), Positives = 150/256 (58%), Gaps = 7/256 (2%)
 Frame = +2

Query: 149 QPIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRH-VRRSRLELVVK 325
           +P+  KIE+V  +  K+ P +GYF +G+DP K +    +G DV+VYR+ V   R ELVV 
Sbjct: 29  EPVQAKIEVVSSDPSKMPPFIGYFTSGFDPVKSS----SGTDVQVYRNKVMHKRTELVVS 84

Query: 326 PKGSKVNFVGTNYSGEAEAPIS--CQYALGVFDKETQTLKIVKIESNKIFRLEPKFAG-- 493
           P GS V FVGT+Y GEA A       Y LGVFDKE+QTLKIV I  NKIFRLEP+  G  
Sbjct: 85  PAGSSVEFVGTSYEGEAVAAARNPATYMLGVFDKESQTLKIVPIGGNKIFRLEPRVKGVE 144

Query: 494 -KDKAPDEAK-VEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGE 667
            K+  P   K VE +TA++ AE+  +   ALGTK++ K     A++   E  E +K + E
Sbjct: 145 YKEPPPTPIKMVEEMTAEQLAEKKRNTDAALGTKRSNKMHSRLADMRGDEEPEAKKNLDE 204

Query: 668 KIKKLKVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFY 847
           K+K ++V   A A   +   R+IP ++++A TP+ AY ++KII   E   LQ   + L  
Sbjct: 205 KMKNVEVKETALANTEAHVTRHIPPYNSSATTPQEAYVLDKIILAEEWNYLQDIYYSLQK 264

Query: 848 TEKVALEAFPIFVRNR 895
                   +P F+RNR
Sbjct: 265 EVAADFSLYPSFIRNR 280


>ref|XP_006407147.1| hypothetical protein EUTSA_v10020760mg [Eutrema salsugineum]
           gi|557108293|gb|ESQ48600.1| hypothetical protein
           EUTSA_v10020760mg [Eutrema salsugineum]
          Length = 436

 Score =  181 bits (459), Expect = 3e-43
 Identities = 104/251 (41%), Positives = 144/251 (57%), Gaps = 2/251 (0%)
 Frame = +2

Query: 149 QPIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRHVRRS--RLELVV 322
           + +++ ++ + E  +++ P+V YF +GYDP  ++  +     V VYR+   S  RL++VV
Sbjct: 45  ETMEINVKEISEKPDRVPPIVAYFASGYDPCAQS-GERESPTVTVYRNKLESKKRLQVVV 103

Query: 323 KPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKDK 502
            P G  V FVG+NY+GE  A  +C Y LGV DKETQTL+I+ I  NKIFRLEP+   K+ 
Sbjct: 104 SPPGKSVEFVGSNYTGEQAARQTCVYKLGVLDKETQTLRILPIAHNKIFRLEPRVKTKET 163

Query: 503 APDEAKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIKKL 682
           A  EA  E      R ERL +L    GTKKA  Q +++   N   + + QK   +K+ K+
Sbjct: 164 ADSEAS-EITVLPGRRERLAELDHEFGTKKAINQEKKRRARNLGNDPDAQKSDEDKLDKV 222

Query: 683 KVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVA 862
            V  +A     S  ARNIP HD +A  P  AYPIEKII  GE   LQ     L    +  
Sbjct: 223 DVNQSALESTASMVARNIPPHDASATNPREAYPIEKIIESGEWVFLQDIYKLLGQEPRAP 282

Query: 863 LEAFPIFVRNR 895
            +A+P+FVRNR
Sbjct: 283 TDAYPVFVRNR 293


>ref|XP_003625839.1| DNA-directed RNA polymerase I subunit rpa49 [Medicago truncatula]
           gi|355500854|gb|AES82057.1| DNA-directed RNA polymerase
           I subunit rpa49 [Medicago truncatula]
          Length = 412

 Score =  179 bits (453), Expect = 2e-42
 Identities = 109/256 (42%), Positives = 146/256 (57%), Gaps = 7/256 (2%)
 Frame = +2

Query: 149 QPIDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRH-VRRSRLELVVK 325
           + +  KIE+V  N  K+ P VGYF +G+DP K +       DV+VYR+ V   R ELVV 
Sbjct: 12  ETVQAKIEVVSSNPTKMPPFVGYFTSGFDPVKSSS---GSTDVQVYRNKVMHKRTELVVS 68

Query: 326 PKGSKVNFVGTNYSGEAEAPIS--CQYALGVFDKETQTLKIVKIESNKIFRLEPKFAG-- 493
           P GS V FVGT+Y GEA A       Y LGVFDKE+QTLKIV I  NKIFRLEP+  G  
Sbjct: 69  PAGSLVEFVGTSYEGEAAAVARNPATYMLGVFDKESQTLKIVPIGGNKIFRLEPRVKGVE 128

Query: 494 -KDKAPDEAK-VEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGE 667
            K+  P   K VE LTA++  E+      ALGTKK+K+ +     +   E  E +K + E
Sbjct: 129 YKEPTPTPTKMVEELTAEQWTEKKRKADAALGTKKSKQMLIWLDEMTADEEPEAKKNLDE 188

Query: 668 KIKKLKVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFY 847
           K+K ++V   A A   +   R+IP ++++A TP+ AY ++KII   E   LQ   + L  
Sbjct: 189 KMKNVEVKETALANTEAHVTRHIPPYNSSATTPQEAYVLDKIILADEWNYLQDIYYSLQK 248

Query: 848 TEKVALEAFPIFVRNR 895
            E      +P F+RNR
Sbjct: 249 EEAANFSLYPSFIRNR 264


>ref|XP_006369274.1| hypothetical protein POPTR_0001s20580g [Populus trichocarpa]
           gi|550347732|gb|ERP65843.1| hypothetical protein
           POPTR_0001s20580g [Populus trichocarpa]
          Length = 472

 Score =  178 bits (452), Expect = 2e-42
 Identities = 109/276 (39%), Positives = 153/276 (55%), Gaps = 29/276 (10%)
 Frame = +2

Query: 155 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKK-----AQDD----GNGDDVKVYRHVRRS- 304
           +D+K+E+V    +K  P+VGYFP+GY+PHK      AQ+          VK+YR+ +R+ 
Sbjct: 54  LDVKLELVNNQVDKTPPVVGYFPSGYNPHKTNDINDAQEPILPLAAPPSVKLYRNAQRAK 113

Query: 305 ----------------RLELVVKPKGSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTL 436
                           RLELVV P GS V FVG +Y GEA A   C YALGV DK TQTL
Sbjct: 114 VEKSSGEKNEKGRTSERLELVVSPNGSNVEFVGNSYKGEAMAAQLCTYALGVLDKATQTL 173

Query: 437 KIVKIESNKIFRLEPKFAGK---DKAPDEAKVEALTAQERAERLNDLTMALGTKKAKKQV 607
           KI+ I  NKI RLEPK  G    DK     +   +TA++RA R+  L +  G KK+  Q 
Sbjct: 174 KIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKSIIQD 233

Query: 608 REKANLNRKENEETQKQMGEKIKKLKVLANATAGDNSEPARNIPYHDTTAETPERAYPIE 787
           ++   L + ++  +QK +G KI+   +  +A    +   ARNIP ++++A TP+ AYP++
Sbjct: 234 KKMQALRKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQEAYPLD 293

Query: 788 KIISKGENEILQKALHYLFYTEKVALEAFPIFVRNR 895
            II  GE + L+     L    +VA  A+P FV NR
Sbjct: 294 GIILTGEWDFLEDIYKILQVGGEVASNAYPTFVCNR 329


>ref|XP_007138779.1| hypothetical protein PHAVU_009G236700g [Phaseolus vulgaris]
           gi|561011866|gb|ESW10773.1| hypothetical protein
           PHAVU_009G236700g [Phaseolus vulgaris]
          Length = 426

 Score =  177 bits (450), Expect = 4e-42
 Identities = 96/248 (38%), Positives = 150/248 (60%), Gaps = 1/248 (0%)
 Frame = +2

Query: 155 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRHVRRS-RLELVVKPK 331
           I++++E+V+E+     P+VGYFP+G+DP K   +     D ++YRH   S R+++VV+P 
Sbjct: 34  IEVEVEVVREHPNITPPIVGYFPSGFDPVKNHANGHGPCDFQLYRHRNMSKRMQVVVRPP 93

Query: 332 GSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKDKAPD 511
            S V FVGT++SGEA A     +ALGV DKE  +LKIV I  NK+FRLEPK      A +
Sbjct: 94  RSSVEFVGTSFSGEAAAGQRSMFALGVLDKEAGSLKIVPIAGNKVFRLEPKVKAVGAADN 153

Query: 512 EAKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIKKLKVL 691
           E    AL      +   + T   GTKK  ++ ++K  L + EN ++Q+ +  K++ + V 
Sbjct: 154 EPASSALEDMTPQQMFAETTAIWGTKKDIEKAKKKLALKQDENPDSQRNLDVKMRNVSVN 213

Query: 692 ANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVALEA 871
            +A     S  +RN+P +DT+A TP+ AY ++KII KGE + L+  ++ + + E+    +
Sbjct: 214 KSALESTESHVSRNVPPYDTSATTPQEAYVLDKIILKGEWDYLED-IYCILHQEEADFSS 272

Query: 872 FPIFVRNR 895
           +P FVRNR
Sbjct: 273 YPTFVRNR 280


>ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prunus persica]
           gi|462411576|gb|EMJ16625.1| hypothetical protein
           PRUPE_ppa006096mg [Prunus persica]
          Length = 427

 Score =  177 bits (450), Expect = 4e-42
 Identities = 101/251 (40%), Positives = 152/251 (60%), Gaps = 4/251 (1%)
 Frame = +2

Query: 155 IDLKIEMVKENQEKIAPLVGYFPTGYDPHKKAQDDGNGDDVKVYRHVRRSR-LELVVKPK 331
           +   I++V +  EK  PLVGYFP  +DP K      N  DV ++R  ++ R L++VV P 
Sbjct: 34  VQATIQVVPDIPEKTPPLVGYFPCSFDPTKSPYS--NSTDVGLFRDSKKPRRLQIVVTPN 91

Query: 332 GSKVNFVGTNYSGEAEAPISCQYALGVFDKETQTLKIVKIESNKIFRLEPKFAGKD---K 502
           G+ V+FVGTNY+GEA    SC +ALGV DK TQTLKI+ + SNKIFRL+P   G +   K
Sbjct: 92  GTNVDFVGTNYTGEATTGQSCNFALGVLDKATQTLKILPVASNKIFRLQPMVRGYNYSAK 151

Query: 503 APDEAKVEALTAQERAERLNDLTMALGTKKAKKQVREKANLNRKENEETQKQMGEKIKKL 682
            P+ +  E LT +E+AE+  +L    GTKKA ++ ++  +L +++  E+QK +  KIK +
Sbjct: 152 EPESSVKEQLTGEEKAEKQMELQSRYGTKKAIRESKKLRSLKQEDGPESQKDLDAKIKLI 211

Query: 683 KVLANATAGDNSEPARNIPYHDTTAETPERAYPIEKIISKGENEILQKALHYLFYTEKVA 862
                A     S+ +R+IP  + +A TP+ AY ++KII  GE ++L     +     +V+
Sbjct: 212 VPNKEALESTESQISRHIPPFNESATTPQEAYSLDKIILTGEWDLLGDIYEHFQGGAEVS 271

Query: 863 LEAFPIFVRNR 895
            +AFP FV +R
Sbjct: 272 WDAFPRFVCHR 282