BLASTX nr result
ID: Papaver27_contig00028082
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00028082
(754 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prun... 253 7e-65
ref|XP_006372225.1| tRNA pseudouridine synthase family protein [... 252 1e-64
ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Popu... 252 1e-64
ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus ... 251 2e-64
ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma ... 248 2e-63
ref|XP_007014569.1| Pseudouridine synthase isoform 3 [Theobroma ... 246 6e-63
ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma ... 246 6e-63
ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-lik... 245 1e-62
gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis] 243 7e-62
ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622... 242 9e-62
ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citr... 242 9e-62
ref|XP_002870430.1| tRNA pseudouridine synthase family protein [... 239 1e-60
ref|XP_006403086.1| hypothetical protein EUTSA_v10003453mg [Eutr... 238 2e-60
ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-lik... 237 4e-60
ref|XP_006850975.1| hypothetical protein AMTR_s00025p00208060 [A... 235 1e-59
ref|NP_198390.2| Pseudouridine synthase family protein [Arabidop... 233 5e-59
emb|CBI33811.3| unnamed protein product [Vitis vinifera] 233 5e-59
ref|XP_006283804.1| hypothetical protein CARUB_v10004903mg [Caps... 232 9e-59
ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mi... 227 4e-57
ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago trun... 226 5e-57
>ref|XP_007222727.1| hypothetical protein PRUPE_ppa006478mg [Prunus persica]
gi|462419663|gb|EMJ23926.1| hypothetical protein
PRUPE_ppa006478mg [Prunus persica]
Length = 409
Score = 253 bits (645), Expect = 7e-65
Identities = 135/256 (52%), Positives = 170/256 (66%), Gaps = 8/256 (3%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLEN--E 176
TWR D+K+QD+ DAINSA+PGKLRVVS ++VSR FHPNF+AKWR Y YIFP D E+ +
Sbjct: 162 TWRKDVKSQDITDAINSAAPGKLRVVSVTEVSRAFHPNFTAKWRHYLYIFPFNDEEDMEQ 221
Query: 177 GIGSGKNDENSSSKEKHSDLKNGCLNVEEKDECLAVDAQNGVECRN------KPRSFSVK 338
SG+N +N S E + + KNGC D+C + N V N KPR F+V
Sbjct: 222 SNQSGENAQNFKSLENYHEHKNGC------DQCNEANVGNLVINDNEDLETLKPREFTVS 275
Query: 339 RVNELLLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRG 518
RVN+LL +LEGK LSY+MFARD K SR+ GPPTECF+YHARA E++LP E ++G
Sbjct: 276 RVNQLLQKLEGKLLSYKMFARDTKPSRNEGPPTECFLYHARAKESKLPCSEH-----EKG 330
Query: 519 QKVMCVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLC 698
++VMC+EL+ NRFLRRMVRVLVAT+IR LM+ DGLC
Sbjct: 331 RRVMCIELVANRFLRRMVRVLVATSIREAAAGADEDALLKLMDATCRRATAPPAPPDGLC 390
Query: 699 LLDVGYEEFNPENTLI 746
L+DVGYEEF+P++ LI
Sbjct: 391 LVDVGYEEFDPQDCLI 406
>ref|XP_006372225.1| tRNA pseudouridine synthase family protein [Populus trichocarpa]
gi|550318756|gb|ERP50022.1| tRNA pseudouridine synthase
family protein [Populus trichocarpa]
Length = 457
Score = 252 bits (643), Expect = 1e-64
Identities = 138/251 (54%), Positives = 165/251 (65%), Gaps = 3/251 (1%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLEN-EG 179
TWR D+K ++EDAIN +PGK+RV S S+VSR FHPNFSAKWRRY YIFP+ D EN E
Sbjct: 211 TWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREE 270
Query: 180 IGSGKNDENSSSKEKHSDLKNGC--LNVEEKDECLAVDAQNGVECRNKPRSFSVKRVNEL 353
I EN SS E +N C L EE E + ++ ++ KPRSFSV RVN+L
Sbjct: 271 IEGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQL 330
Query: 354 LLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVMC 533
L QLEGK LSY+MFARD KASR+ GPPTECF+YHARATE RLPS + ++G +VMC
Sbjct: 331 LQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDH-----EKGIRVMC 385
Query: 534 VELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDVG 713
VELI NRFLR+MVRVLVAT++R LM+ DGLCL+DVG
Sbjct: 386 VELIANRFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVG 445
Query: 714 YEEFNPENTLI 746
Y EF+P N LI
Sbjct: 446 YTEFDPRNCLI 456
>ref|XP_006372224.1| hypothetical protein POPTR_0018s14400g [Populus trichocarpa]
gi|550318755|gb|ERP50021.1| hypothetical protein
POPTR_0018s14400g [Populus trichocarpa]
Length = 448
Score = 252 bits (643), Expect = 1e-64
Identities = 138/251 (54%), Positives = 165/251 (65%), Gaps = 3/251 (1%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLEN-EG 179
TWR D+K ++EDAIN +PGK+RV S S+VSR FHPNFSAKWRRY YIFP+ D EN E
Sbjct: 202 TWRKDVKPHEIEDAINDVAPGKVRVESISEVSRAFHPNFSAKWRRYLYIFPLNDGENREE 261
Query: 180 IGSGKNDENSSSKEKHSDLKNGC--LNVEEKDECLAVDAQNGVECRNKPRSFSVKRVNEL 353
I EN SS E +N C L EE E + ++ ++ KPRSFSV RVN+L
Sbjct: 262 IEGEGGIENFSSHENCEKQRNECGELASEENVENSIISDEDELQGAKKPRSFSVCRVNQL 321
Query: 354 LLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVMC 533
L QLEGK LSY+MFARD KASR+ GPPTECF+YHARATE RLPS + ++G +VMC
Sbjct: 322 LQQLEGKLLSYKMFARDTKASRNVGPPTECFLYHARATETRLPSPDH-----EKGIRVMC 376
Query: 534 VELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDVG 713
VELI NRFLR+MVRVLVAT++R LM+ DGLCL+DVG
Sbjct: 377 VELIANRFLRKMVRVLVATSVREAAAGAQEDALLKLMDATCRRATAPPAPPDGLCLVDVG 436
Query: 714 YEEFNPENTLI 746
Y EF+P N LI
Sbjct: 437 YTEFDPRNCLI 447
>ref|XP_002524161.1| pseudouridylate synthase, putative [Ricinus communis]
gi|223536579|gb|EEF38224.1| pseudouridylate synthase,
putative [Ricinus communis]
Length = 443
Score = 251 bits (641), Expect = 2e-64
Identities = 135/251 (53%), Positives = 166/251 (66%), Gaps = 3/251 (1%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 182
TWR D++ ++EDAINS++PGK+RV+S S+VSR FHPNFSAKWRRY YIFPI D E+
Sbjct: 197 TWRKDVRPHEIEDAINSSAPGKIRVISVSEVSRVFHPNFSAKWRRYLYIFPINDGEDSEQ 256
Query: 183 GSGKND-ENSSSKEKHSDLKNGC--LNVEEKDECLAVDAQNGVECRNKPRSFSVKRVNEL 353
D EN S EK+ + +NGC L EE E L ++ +E KPR FS+ RVN+L
Sbjct: 257 SFDSEDLENLRSYEKYDEQRNGCAELTSEEHVEELITSDKDELEGAKKPRIFSICRVNQL 316
Query: 354 LLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVMC 533
L QLEGK LSY++FARD KASR+ GPPTECFIYHARATEARLP + G+KVMC
Sbjct: 317 LQQLEGKLLSYKIFARDTKASRNVGPPTECFIYHARATEARLPCPDH-----GEGRKVMC 371
Query: 534 VELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDVG 713
VEL+ NRFLR+MVRVLVAT+IR LM+ DGLCL DVG
Sbjct: 372 VELVANRFLRKMVRVLVATSIREAAAGAEDDALLKLMDASCRRASAPPAPPDGLCLFDVG 431
Query: 714 YEEFNPENTLI 746
Y EF+ + ++
Sbjct: 432 YTEFDAQICIV 442
>ref|XP_007014568.1| Pseudouridine synthase isoform 2 [Theobroma cacao]
gi|508784931|gb|EOY32187.1| Pseudouridine synthase
isoform 2 [Theobroma cacao]
Length = 446
Score = 248 bits (632), Expect = 2e-63
Identities = 135/252 (53%), Positives = 166/252 (65%), Gaps = 4/252 (1%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPII--DLENE 176
TWR D+K D+EDAINS +PGKLRVVS S+VSR FHPNFSAKWR Y YIFP+ ++E +
Sbjct: 197 TWRKDVKPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQ 256
Query: 177 GIGSGKNDENSSSKEKHSDLKNGCL-NVE-EKDECLAVDAQNGVECRNKPRSFSVKRVNE 350
+ K EN S +++ +NG L N+ E E L + G+E NKP FSV RVN+
Sbjct: 257 SCENKKEVENFISDGNYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQ 316
Query: 351 LLLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVM 530
LL QLE K LSY+MFARD KASR+ GPPTECF+YHARA EAR+P +G G++VM
Sbjct: 317 LLQQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPCSVNDHG---EGREVM 373
Query: 531 CVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDV 710
CVEL+ NRFLR+MVRVLVAT+IR LM DGLCL+DV
Sbjct: 374 CVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDV 433
Query: 711 GYEEFNPENTLI 746
GY EF+P+N L+
Sbjct: 434 GYTEFDPQNCLL 445
>ref|XP_007014569.1| Pseudouridine synthase isoform 3 [Theobroma cacao]
gi|508784932|gb|EOY32188.1| Pseudouridine synthase
isoform 3 [Theobroma cacao]
Length = 303
Score = 246 bits (628), Expect = 6e-63
Identities = 134/252 (53%), Positives = 165/252 (65%), Gaps = 4/252 (1%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPII--DLENE 176
TWR D+K D+EDAINS +PGKLRVVS S+VSR FHPNFSAKWR Y YIFP+ ++E +
Sbjct: 56 TWRKDVKPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQ 115
Query: 177 GIGSGKNDENSSSKEKHSDLKNGCL-NVE-EKDECLAVDAQNGVECRNKPRSFSVKRVNE 350
+ K EN S +++ +NG L N+ E E L + G+E NKP FSV RVN+
Sbjct: 116 SCENKKEVENFISDGNYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQ 175
Query: 351 LLLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVM 530
LL QLE K LSY+MFARD KASR+ GPPTECF+YHARA EAR+P + G++VM
Sbjct: 176 LLQQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPC-----SDHGEGREVM 230
Query: 531 CVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDV 710
CVEL+ NRFLR+MVRVLVAT+IR LM DGLCL+DV
Sbjct: 231 CVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDV 290
Query: 711 GYEEFNPENTLI 746
GY EF+P+N L+
Sbjct: 291 GYTEFDPQNCLL 302
>ref|XP_007014567.1| Pseudouridine synthase isoform 1 [Theobroma cacao]
gi|508784930|gb|EOY32186.1| Pseudouridine synthase
isoform 1 [Theobroma cacao]
Length = 444
Score = 246 bits (628), Expect = 6e-63
Identities = 134/252 (53%), Positives = 165/252 (65%), Gaps = 4/252 (1%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPII--DLENE 176
TWR D+K D+EDAINS +PGKLRVVS S+VSR FHPNFSAKWR Y YIFP+ ++E +
Sbjct: 197 TWRKDVKPWDIEDAINSVAPGKLRVVSVSEVSRVFHPNFSAKWRHYLYIFPLSNQEIEKQ 256
Query: 177 GIGSGKNDENSSSKEKHSDLKNGCL-NVE-EKDECLAVDAQNGVECRNKPRSFSVKRVNE 350
+ K EN S +++ +NG L N+ E E L + G+E NKP FSV RVN+
Sbjct: 257 SCENKKEVENFISDGNYNEQRNGYLENIRWENVENLIISDNMGLEAANKPTRFSVCRVNQ 316
Query: 351 LLLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVM 530
LL QLE K LSY+MFARD KASR+ GPPTECF+YHARA EAR+P + G++VM
Sbjct: 317 LLQQLERKLLSYKMFARDTKASRNIGPPTECFMYHARAAEARIPC-----SDHGEGREVM 371
Query: 531 CVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDV 710
CVEL+ NRFLR+MVRVLVAT+IR LM DGLCL+DV
Sbjct: 372 CVELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMGATCRRATAPPAPPDGLCLVDV 431
Query: 711 GYEEFNPENTLI 746
GY EF+P+N L+
Sbjct: 432 GYTEFDPQNCLL 443
>ref|XP_002275354.2| PREDICTED: tRNA pseudouridine synthase A-like [Vitis vinifera]
Length = 433
Score = 245 bits (626), Expect = 1e-62
Identities = 131/254 (51%), Positives = 166/254 (65%), Gaps = 5/254 (1%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLEN-EG 179
TW+ D+K QD+EDAIN A+PGKLRV+S S+VSR FHPNFSAKWR YFYIFP+ D ++ E
Sbjct: 185 TWKKDVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLNDGDDGEQ 244
Query: 180 IGSGKND-ENSSSKEKHSDLKNGC---LNVEEKDECLAVDAQNGVECRNKPRSFSVKRVN 347
I + D + S EK+ + + C N E E L D E R KP +FS+ RV+
Sbjct: 245 ISENEMDIQKISFNEKYGEQGSECPAQYNGGENTENLIFDDDGEFESRKKPSTFSISRVD 304
Query: 348 ELLLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKV 527
+LL QLEGK LSY++FARD KASR+ GPPTECF++HARATEARL + +D G KV
Sbjct: 305 QLLRQLEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQ-----FSDDGEGTKV 359
Query: 528 MCVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLD 707
MC+EL+ NRFLR+MVRVLVAT+IR LM+ DGLCL+D
Sbjct: 360 MCIELVANRFLRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLCLID 419
Query: 708 VGYEEFNPENTLIQ 749
VG+ EF+P+ I+
Sbjct: 420 VGFTEFDPQICFIR 433
>gb|EXC12817.1| tRNA pseudouridine synthase A [Morus notabilis]
Length = 446
Score = 243 bits (619), Expect = 7e-62
Identities = 137/251 (54%), Positives = 163/251 (64%), Gaps = 3/251 (1%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 182
TWR DI QD+E+AIN+A+ GKL+ S S+VSR FHPNFSAKWRRY YIFP D E+E
Sbjct: 204 TWRKDITCQDIEEAINNAALGKLKAKSVSEVSRVFHPNFSAKWRRYLYIFPFNDEEDEE- 262
Query: 183 GSGKNDENSSSKEKHSDLKNGCLNVEEKDEC---LAVDAQNGVECRNKPRSFSVKRVNEL 353
S KN EN + EK +++GC E DE L +D +E KP SFSV RV++L
Sbjct: 263 QSNKNGENLETYEK---IESGC--GEWNDESFGNLIIDDSEELESGKKPSSFSVSRVDQL 317
Query: 354 LLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVMC 533
L LEGK LSY+MFARD KASR+ GPPTECFIYHARA EARLP+ + G+K+MC
Sbjct: 318 LRLLEGKLLSYKMFARDTKASRNEGPPTECFIYHARAAEARLPT-----SDCTEGRKIMC 372
Query: 534 VELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDVG 713
VEL+ NRFLR+MVRVLVAT+IR LM+ DGLCL+DVG
Sbjct: 373 VELVANRFLRKMVRVLVATSIREAAAGAEEDALLKLMDATCRRATAPPAPPDGLCLVDVG 432
Query: 714 YEEFNPENTLI 746
Y EF P N LI
Sbjct: 433 YSEFKPNNCLI 443
>ref|XP_006474334.1| PREDICTED: uncharacterized protein LOC102622951 [Citrus sinensis]
Length = 454
Score = 242 bits (618), Expect = 9e-62
Identities = 130/250 (52%), Positives = 161/250 (64%), Gaps = 2/250 (0%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLEN--E 176
TWR D+K ++EDAINSA+PGK+RV+S S+VSR FHPNFSAKWRRY YIFP+ D E +
Sbjct: 210 TWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQ 269
Query: 177 GIGSGKNDENSSSKEKHSDLKNGCLNVEEKDECLAVDAQNGVECRNKPRSFSVKRVNELL 356
I S EN + NGC E E L ++ + G KPR+F++ RVN LL
Sbjct: 270 SIDSEVEVENFHTSNNVGKQSNGCY---ENIENLLINDEGGFGSHEKPRNFTICRVNLLL 326
Query: 357 LQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVMCV 536
+LEGK LSY+ FARD KASR+ GPPTECFIYHARATEA LP +G G+KVMCV
Sbjct: 327 QRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDHG---EGRKVMCV 383
Query: 537 ELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDVGY 716
EL+ NRFLR+MVRVLVAT +R L++ +GLCL+DVGY
Sbjct: 384 ELVANRFLRKMVRVLVATLVREAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVGY 443
Query: 717 EEFNPENTLI 746
F+P+N+LI
Sbjct: 444 TNFDPQNSLI 453
>ref|XP_006453182.1| hypothetical protein CICLE_v10008288mg [Citrus clementina]
gi|557556408|gb|ESR66422.1| hypothetical protein
CICLE_v10008288mg [Citrus clementina]
Length = 447
Score = 242 bits (618), Expect = 9e-62
Identities = 130/250 (52%), Positives = 161/250 (64%), Gaps = 2/250 (0%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLEN--E 176
TWR D+K ++EDAINSA+PGK+RV+S S+VSR FHPNFSAKWRRY YIFP+ D E +
Sbjct: 203 TWRKDVKPSEIEDAINSAAPGKIRVISVSQVSRVFHPNFSAKWRRYLYIFPLNDGEKREQ 262
Query: 177 GIGSGKNDENSSSKEKHSDLKNGCLNVEEKDECLAVDAQNGVECRNKPRSFSVKRVNELL 356
I S EN + NGC E E L ++ + G KPR+F++ RVN LL
Sbjct: 263 SIDSEVEVENFHTSNNVGKQSNGCY---ENIENLLINDEGGFGSHEKPRNFTICRVNLLL 319
Query: 357 LQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVMCV 536
+LEGK LSY+ FARD KASR+ GPPTECFIYHARATEA LP +G G+KVMCV
Sbjct: 320 QRLEGKLLSYKTFARDTKASRNIGPPTECFIYHARATEATLPCPVNDHG---EGRKVMCV 376
Query: 537 ELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDVGY 716
EL+ NRFLR+MVRVLVAT +R L++ +GLCL+DVGY
Sbjct: 377 ELVANRFLRKMVRVLVATLVREAAAGADEDALLKLVDATCRRATAPPAPPEGLCLVDVGY 436
Query: 717 EEFNPENTLI 746
F+P+N+LI
Sbjct: 437 TNFDPQNSLI 446
>ref|XP_002870430.1| tRNA pseudouridine synthase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297316266|gb|EFH46689.1| tRNA
pseudouridine synthase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 420
Score = 239 bits (609), Expect = 1e-60
Identities = 132/256 (51%), Positives = 162/256 (63%), Gaps = 8/256 (3%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 182
TWR DI+ +EDAIN + GKLRVVS SKVSR FHPNFSAKWRRY YIFP+ D E+
Sbjct: 170 TWRKDIEPIAIEDAINKDASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAESLH- 228
Query: 183 GSGKNDENSSSKEKHSDLKNGCLNVE--------EKDECLAVDAQNGVECRNKPRSFSVK 338
SG+N EN E H +NG L+ E E DE + NG+E KP FSV
Sbjct: 229 ESGENHENFIFDENHEKQRNGLLSEENTEEVILSEDDELEIEETSNGLEVVEKPSDFSVI 288
Query: 339 RVNELLLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRG 518
+V++LL QL+GK LSY+MFARD KA+R+ GPPTECF+YHARA E RL + V G
Sbjct: 289 KVDQLLQQLQGKVLSYKMFARDTKAARNEGPPTECFMYHARAAEIRLSCSDCV-----EG 343
Query: 519 QKVMCVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLC 698
++VMCVEL+ NRFLR+MVRVLVAT+IR L+E +GLC
Sbjct: 344 RRVMCVELVANRFLRKMVRVLVATSIREAAAGAENDALLKLLEASCRRATAPPAPSEGLC 403
Query: 699 LLDVGYEEFNPENTLI 746
L DVGY +F+P+ +LI
Sbjct: 404 LFDVGYADFDPQTSLI 419
>ref|XP_006403086.1| hypothetical protein EUTSA_v10003453mg [Eutrema salsugineum]
gi|557104193|gb|ESQ44539.1| hypothetical protein
EUTSA_v10003453mg [Eutrema salsugineum]
Length = 420
Score = 238 bits (607), Expect = 2e-60
Identities = 132/256 (51%), Positives = 164/256 (64%), Gaps = 8/256 (3%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 182
TWR DI+ D+EDAIN + GKLRVVS SKVSR FHPNFSAKWRRY YIFP+ + E
Sbjct: 171 TWRKDIELIDIEDAINKDASGKLRVVSISKVSRAFHPNFSAKWRRYLYIFPLDNAEP--C 228
Query: 183 GSGKNDENSSSKEKHSDLKNGCLNVEE-----KDECLAVDAQ---NGVECRNKPRSFSVK 338
SGK EN E H +NG L+ EE +D+ L +D NG++ KP FSV
Sbjct: 229 ESGKTRENFIFHENHGKQRNGLLSEEETEGVSEDDELEIDETEKVNGLQVVEKPSEFSVS 288
Query: 339 RVNELLLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRG 518
+V++LL QL+GK LSY+MFARD KA+R+ GPPTECF+YHARA E RL + V G
Sbjct: 289 KVDQLLQQLQGKLLSYKMFARDTKAARNEGPPTECFMYHARAAEIRLSCPDYV-----EG 343
Query: 519 QKVMCVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLC 698
++VMCVEL+ NRFLR+MVRVLVAT+IR L+E +GLC
Sbjct: 344 RRVMCVELVANRFLRKMVRVLVATSIREAAAGAENDALLKLLEASCRRATAPPAPCEGLC 403
Query: 699 LLDVGYEEFNPENTLI 746
L DVGY +F+P+ +LI
Sbjct: 404 LFDVGYADFDPQTSLI 419
>ref|XP_004299762.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca
subsp. vesca]
Length = 410
Score = 237 bits (604), Expect = 4e-60
Identities = 127/254 (50%), Positives = 162/254 (63%), Gaps = 6/254 (2%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 182
TW D++ QD+ DAI++A+PGKLR VS ++VSR FHPNFSAKWRRY YIFP D E +
Sbjct: 161 TWSKDVRCQDIADAIDNAAPGKLRTVSVTEVSRVFHPNFSAKWRRYLYIFPFNDDEEDRE 220
Query: 183 GSGKNDENSSS---KEKHSD---LKNGCLNVEEKDECLAVDAQNGVECRNKPRSFSVKRV 344
S EN+ KE H + + + C + + D G+E KP+ FSV RV
Sbjct: 221 QSNDTGENAQILKIKENHHEHEVVSDNCSEANVGNTNITDDV--GLEAEKKPQMFSVSRV 278
Query: 345 NELLLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQK 524
N+LL +LEGK LSY+MFARD KASR+ GPPTECF++HARA E RLP E ++G++
Sbjct: 279 NKLLQKLEGKLLSYKMFARDTKASRNEGPPTECFVFHARAREYRLPCSEH-----EKGRR 333
Query: 525 VMCVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLL 704
+MC+ELI NRFLRRM+RVLVAT+IR LM+ DGLCL+
Sbjct: 334 IMCIELIANRFLRRMIRVLVATSIREAAAGADEDALIKLMDATCRRATAPPAPPDGLCLV 393
Query: 705 DVGYEEFNPENTLI 746
DVGYEEF+P + LI
Sbjct: 394 DVGYEEFDPLDCLI 407
>ref|XP_006850975.1| hypothetical protein AMTR_s00025p00208060 [Amborella trichopoda]
gi|548854646|gb|ERN12556.1| hypothetical protein
AMTR_s00025p00208060 [Amborella trichopoda]
Length = 371
Score = 235 bits (600), Expect = 1e-59
Identities = 129/253 (50%), Positives = 166/253 (65%), Gaps = 4/253 (1%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPI-IDLEN-- 173
TWR D+KTQ++E AIN+ +PG+LR V S+VSR FHPNFSAKWR Y YIFP+ ++ E+
Sbjct: 128 TWRTDVKTQEIEHAINTVAPGQLRAVYVSEVSRAFHPNFSAKWRHYLYIFPLKVEEESLG 187
Query: 174 -EGIGSGKNDENSSSKEKHSDLKNGCLNVEEKDECLAVDAQNGVECRNKPRSFSVKRVNE 350
E IG G N+ +E+ ++NG N C + ++ +E R+KP FSV +V+
Sbjct: 188 LENIGGGFIQCNNHDEERKEWVENGLEN-----GCSIMVDEDYLE-RSKPMRFSVSKVDR 241
Query: 351 LLLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVM 530
+L QLEG+ LSY+MFARD K+SR+ GPPTECF+YHARA E RLP +EV GN G VM
Sbjct: 242 ILRQLEGRLLSYKMFARDTKSSRNEGPPTECFLYHARAAETRLPCPDEVDGN---GLGVM 298
Query: 531 CVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDV 710
CVEL+ NRFLR+MVRVLVAT+IR LM+ DGLCL+DV
Sbjct: 299 CVELVANRFLRKMVRVLVATSIREAAAGAGDDVLLRLMDATCRRATAPPAPPDGLCLVDV 358
Query: 711 GYEEFNPENTLIQ 749
GYE+F P NT I+
Sbjct: 359 GYEDFKPGNTFIR 371
>ref|NP_198390.2| Pseudouridine synthase family protein [Arabidopsis thaliana]
gi|27311599|gb|AAO00765.1| putative protein [Arabidopsis
thaliana] gi|30725698|gb|AAP37871.1| At5g35400
[Arabidopsis thaliana] gi|332006580|gb|AED93963.1|
Pseudouridine synthase family protein [Arabidopsis
thaliana]
Length = 420
Score = 233 bits (594), Expect = 5e-59
Identities = 130/256 (50%), Positives = 159/256 (62%), Gaps = 8/256 (3%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 182
TWR DI+ +EDAIN + GKLRVVS SKVSR FHPNFSAKWRRY YIFP+ D E
Sbjct: 170 TWRKDIEPIAIEDAINKDASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLR- 228
Query: 183 GSGKNDENSSSKEKHSDLKNGCLNVE--------EKDECLAVDAQNGVECRNKPRSFSVK 338
SG+N EN E +NG L+ E E DE + N +E KP FSV
Sbjct: 229 KSGENHENFIFDENKKKQRNGLLSEEIAEEVIMSEDDELEIEETSNALEVVEKPSDFSVS 288
Query: 339 RVNELLLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRG 518
+V++LL L+GK LSY+MFARD KA+R+ GPPTECF+YHARA E RL S + V G
Sbjct: 289 KVDQLLQHLQGKVLSYKMFARDTKAARNEGPPTECFMYHARAAEIRLSSSDCV-----EG 343
Query: 519 QKVMCVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLC 698
++VMCVEL+ NRFLR+MVRVLVAT+IR L+E +GLC
Sbjct: 344 RRVMCVELVANRFLRKMVRVLVATSIREAAAGAEDDALLKLLEASCRRATAPPAPSEGLC 403
Query: 699 LLDVGYEEFNPENTLI 746
L DVGY +F+P+ +LI
Sbjct: 404 LFDVGYTDFDPQTSLI 419
>emb|CBI33811.3| unnamed protein product [Vitis vinifera]
Length = 402
Score = 233 bits (594), Expect = 5e-59
Identities = 123/249 (49%), Positives = 154/249 (61%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 182
TW+ D+K QD+EDAIN A+PGKLRV+S S+VSR FHPNFSAKWR YFYIFP+ D
Sbjct: 185 TWKKDVKVQDIEDAINGAAPGKLRVISVSEVSRIFHPNFSAKWRHYFYIFPLND------ 238
Query: 183 GSGKNDENSSSKEKHSDLKNGCLNVEEKDECLAVDAQNGVECRNKPRSFSVKRVNELLLQ 362
D+ E D++ N E R KP +FS+ RV++LL Q
Sbjct: 239 ----GDDGEQISENEMDIQKISFN----------------ENRKKPSTFSISRVDQLLRQ 278
Query: 363 LEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVMCVEL 542
LEGK LSY++FARD KASR+ GPPTECF++HARATEARL + +D G KVMC+EL
Sbjct: 279 LEGKLLSYKIFARDTKASRNIGPPTECFVFHARATEARLQ-----FSDDGEGTKVMCIEL 333
Query: 543 IGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDVGYEE 722
+ NRFLR+MVRVLVAT+IR LM+ DGLCL+DVG+ E
Sbjct: 334 VANRFLRKMVRVLVATSIREAAAGAEQDALLKLMDATCRRATAPPAPPDGLCLIDVGFTE 393
Query: 723 FNPENTLIQ 749
F+P+ I+
Sbjct: 394 FDPQICFIR 402
>ref|XP_006283804.1| hypothetical protein CARUB_v10004903mg [Capsella rubella]
gi|482552509|gb|EOA16702.1| hypothetical protein
CARUB_v10004903mg [Capsella rubella]
Length = 421
Score = 232 bits (592), Expect = 9e-59
Identities = 127/256 (49%), Positives = 160/256 (62%), Gaps = 8/256 (3%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 182
TWR DI+ +EDAIN + GKL+VVS SKVSR FHPNFSAKWRRY YIFP+ D+E
Sbjct: 171 TWRKDIEPIAIEDAINKDASGKLKVVSISKVSRSFHPNFSAKWRRYLYIFPLDDIEPLCE 230
Query: 183 GSGKNDENSSSKEKHSDLKNGCLNVE--------EKDECLAVDAQNGVECRNKPRSFSVK 338
G GKN EN E H +NG L+ E E DE + ++ KP FSV
Sbjct: 231 G-GKNHENYIFDENHEKQRNGLLSEENTEEVVLSEDDELEIEETSKELQVVEKPSDFSVS 289
Query: 339 RVNELLLQLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRG 518
+V+++L QL+GK LSY+MFARD KA+R+ GPPTECF+YHARA E +L + V G
Sbjct: 290 KVDQILQQLQGKVLSYKMFARDTKAARNEGPPTECFMYHARAAEIKLSCSDHV-----EG 344
Query: 519 QKVMCVELIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLC 698
++VMCVEL+ NRFLR+MVRVLVAT+IR L+E +GLC
Sbjct: 345 RRVMCVELVANRFLRKMVRVLVATSIREAAAGADNDALLKLLEASCRRATAPPAPSEGLC 404
Query: 699 LLDVGYEEFNPENTLI 746
L DVGY +F+P+ +LI
Sbjct: 405 LFDVGYTDFDPQISLI 420
>ref|XP_003532450.2| PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like
isoform X1 [Glycine max]
Length = 444
Score = 227 bits (578), Expect = 4e-57
Identities = 124/249 (49%), Positives = 157/249 (63%), Gaps = 1/249 (0%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 182
TW+ D+K +D+EDAIN A+PGKLRV+S S+VSR FHPNFSAKWRRY YIFP+ +
Sbjct: 214 TWKKDVKPRDIEDAINHAAPGKLRVISVSEVSRVFHPNFSAKWRRYLYIFPLTN------ 267
Query: 183 GSGKNDENSSSKEKHSDLK-NGCLNVEEKDECLAVDAQNGVECRNKPRSFSVKRVNELLL 359
G D++S + E + K N + KDE +E K +FS+ +VN LL
Sbjct: 268 -GGYTDQSSDNGEFYDSFKYNEIHDSASKDE---------LENEKKSYAFSISKVNRLLR 317
Query: 360 QLEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVMCVE 539
+LEGK LSY+MFARD KASR+ GPPTECF+YHARA E +LP+ + +G + KVMCVE
Sbjct: 318 KLEGKLLSYKMFARDTKASRNDGPPTECFVYHARAMEVKLPATD--HGEE---TKVMCVE 372
Query: 540 LIGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDVGYE 719
L+ NRFLR+MVRVLVAT+IR LM+ DGLCL+DVGY
Sbjct: 373 LVANRFLRKMVRVLVATSIREAAAGAEDDALIKLMDATCRRATAPPAPPDGLCLVDVGYT 432
Query: 720 EFNPENTLI 746
EF P+ I
Sbjct: 433 EFEPQKCFI 441
>ref|XP_003630601.1| tRNA pseudouridine synthase A [Medicago truncatula]
gi|355524623|gb|AET05077.1| tRNA pseudouridine synthase
A [Medicago truncatula]
Length = 400
Score = 226 bits (577), Expect = 5e-57
Identities = 125/248 (50%), Positives = 153/248 (61%)
Frame = +3
Query: 3 TWRNDIKTQDVEDAINSASPGKLRVVSASKVSRDFHPNFSAKWRRYFYIFPIIDLENEGI 182
TW+ DIK +++EDAIN A+PGKLRVVS +VSR FHPNFSAKWRRY YIFP+ D
Sbjct: 170 TWKKDIKPREIEDAINDAAPGKLRVVSVYEVSRAFHPNFSAKWRRYLYIFPLTD------ 223
Query: 183 GSGKNDENSSSKEKHSDLKNGCLNVEEKDECLAVDAQNGVECRNKPRSFSVKRVNELLLQ 362
G K+ + + S + N + + KDE +E NK F V++VN LL +
Sbjct: 224 GQDKDQSGGNGESCDSFIYNEICDSDSKDE---------LEKENKSYVFGVRKVNRLLQK 274
Query: 363 LEGKSLSYRMFARDIKASRSTGPPTECFIYHARATEARLPSIEEVYGNDDRGQKVMCVEL 542
LEGK LSY+MFARD KASR+ GPPTECF++HARA EA+LP E G + R VMC+EL
Sbjct: 275 LEGKMLSYKMFARDTKASRNDGPPTECFVHHARAMEAKLPITEN--GEETR---VMCIEL 329
Query: 543 IGNRFLRRMVRVLVATTIRXXXXXXXXXXXXNLMEXXXXXXXXXXXXXDGLCLLDVGYEE 722
+ NRFLR+MVRVLVATTIR LM+ DGLCL+DVGY E
Sbjct: 330 VANRFLRKMVRVLVATTIREAAAGAEDDALLKLMDATCRRATAPPAPPDGLCLVDVGYAE 389
Query: 723 FNPENTLI 746
F E I
Sbjct: 390 FEREKCFI 397