BLASTX nr result

ID: Papaver27_contig00028017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00028017
         (1848 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB67543.1| F-box protein [Morus notabilis]                         62   7e-07
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    62   1e-06

>gb|EXB67543.1| F-box protein [Morus notabilis]
          Length = 395

 Score = 62.4 bits (150), Expect = 7e-07
 Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 9/181 (4%)
 Frame = +3

Query: 501  SHLPDDLFTENILTRLPFRDLAATCSGVSKLWYNLIYNDNRFAATHLLVQQNQKNYDLFL 680
            S+LP+D+    IL +LP + L      VSK W++LI ND +F A HL   Q+ KN   F 
Sbjct: 5    SNLPEDMVITEILPKLPVKSLMRF-KCVSKKWFSLITNDPKFIAAHLQYHQS-KNTKFFS 62

Query: 681  HFLDNRESCYIFRLAKNQHNN--SLNMKFSLVRYFQFKY------ELVGYCNGLTCYSER 836
                  +  + + L K    N  S +  F    Y +  Y       +VG CNGL C S  
Sbjct: 63   IIERKHDPVWKYELGKFLVLNYESKDAIFDQT-YLEKSYLSSNINNIVGSCNGLVCLSTF 121

Query: 837  ELVDGTGSITVVNLTTLETLGLSYTTPRTRKYNHLCH-GFGLDPFSQVYKVVLIYTSKAS 1013
             +V+GT  I + N  T E   +   T  T  ++     GFG D  S+ YK+V I  S ++
Sbjct: 122  HMVNGT-KIILWNPATREFRDIPDVTFPTDVFSASGPLGFGFDKNSKDYKLVRIMKSLST 180

Query: 1014 D 1016
            +
Sbjct: 181  N 181


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
            gi|223533120|gb|EEF34878.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 379

 Score = 61.6 bits (148), Expect = 1e-06
 Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
 Frame = +3

Query: 504  HLPDDLFTENILTRLPFRDLAATCSGVSKLWYNLIYNDNRFAATH--LLVQQNQKNYDLF 677
            H+P ++  + I  RLP + L   C  + K WY+LI N N F +TH    +  N  NY + 
Sbjct: 4    HIPKEVLIK-IFLRLPVKQLLR-CRCICKTWYSLISNHN-FISTHSRYTIDSNNNNYLIL 60

Query: 678  LHFL--DNRESCYIFRLAKNQHNNSLNMKFSLVRYFQFKYELVGYCNGLTCYSERELVDG 851
             H+   + +E   +     +  +    + F L   + + +E+VG CNG+ C     L D 
Sbjct: 61   RHYSRSNKKERFALHFDDDDMFSEYQELDFPLESSWDY-FEIVGSCNGIIC-----LTDN 114

Query: 852  TGSITVVNLTTLETLGLSYTTPRTR---KYNHLCHGFGLDPFSQVYKVV-LIYTSKASDR 1019
               I    +    ++GLS T P  R   K +++  GFG D  +  YKV+ ++Y S   D 
Sbjct: 115  HSHILKRIVLWNPSIGLSVTLPLQRISYKVSNVVLGFGFDSRTNDYKVIRIVYYSTNDDS 174

Query: 1020 FL 1025
             +
Sbjct: 175  LM 176


Top