BLASTX nr result
ID: Papaver27_contig00027393
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00027393
(842 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008802509.1| ribosomal protein S4 (mitochondrion) [Asclep... 88 4e-15
dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [N... 88 4e-15
ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millet... 88 5e-15
ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus ... 87 8e-15
ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus] gi|... 87 1e-14
gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella t... 84 5e-14
ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica ... 83 1e-13
emb|CBX33388.1| ribosomal protein S4 (mitochondrion) [Malus dome... 79 2e-12
ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygr... 79 3e-12
ref|XP_004500180.1| PREDICTED: ribosomal protein S4, mitochondri... 78 4e-12
ref|YP_173472.1| ribosomal protein S4 [Nicotiana tabacum] 78 5e-12
gb|AHC94278.1| ribosomal protein S4, partial (mitochondrion) [Am... 77 6e-12
ref|YP_007889804.1| ribosomal protein S4 (mitochondrion) [Vigna ... 77 6e-12
ref|YP_007516900.1| ribosomal protein S4 (mitochondrion) [Glycin... 77 6e-12
ref|YP_004222821.1| ribosomal protein S4 [Vigna radiata] gi|3082... 77 6e-12
ref|YP_008999590.1| ribosomal protein S4 (mitochondrion) [Vaccin... 77 8e-12
ref|YP_740450.1| ribosomal protein S4 [Zea luxurians] gi|1102876... 77 8e-12
ref|YP_588274.1| ribosomal protein S4 [Zea mays subsp. mays] gi|... 77 8e-12
ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|375911... 77 1e-11
sp|Q31708.2|RT04_ARATH RecName: Full=Ribosomal protein S4, mitoc... 77 1e-11
>ref|YP_008802509.1| ribosomal protein S4 (mitochondrion) [Asclepias syriaca]
gi|556562347|gb|AGZ63043.1| ribosomal protein S4
(mitochondrion) [Asclepias syriaca]
Length = 274
Score = 88.2 bits (217), Expect = 4e-15
Identities = 50/96 (52%), Positives = 53/96 (55%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKNR R+RSP + + LY NST S SP LP
Sbjct: 181 NEKNRNIPTRTRSPIVYNS-------------SLYSNSTYCSASPHQFTMKRKRKRIELP 227
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNLL 616
THY EVNYRTLKAVVFYGPNI HIPH I KDLNLL
Sbjct: 228 THYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLL 263
>dbj|BAD83538.2| ribosomal protein S4, partial (mitochondrion) [Nicotiana tabacum]
Length = 349
Score = 88.2 bits (217), Expect = 4e-15
Identities = 50/96 (52%), Positives = 53/96 (55%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKNR R+RSP + + LY NST S SP LP
Sbjct: 256 NEKNRNIPTRTRSPIVYNS-------------SLYSNSTYCSASPHQFTKKIKIKRIELP 302
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNLL 616
THY EVNYRTLKAVVFYGPNI HIPH I KDLNLL
Sbjct: 303 THYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLL 338
>ref|YP_005090450.1| ribosomal protein S4 (mitochondrion) [Millettia pinnata]
gi|372450274|ref|YP_005090457.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
gi|357197313|gb|AET62910.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
gi|357197320|gb|AET62917.1| ribosomal protein S4
(mitochondrion) [Millettia pinnata]
Length = 358
Score = 87.8 bits (216), Expect = 5e-15
Identities = 50/96 (52%), Positives = 54/96 (56%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKNR R+RSP ++ + LY NST S SP LP
Sbjct: 265 NEKNRYLPTRTRSPIVD-------------YSSLYSNSTYCSSSPHQFTMKRRIKRIELP 311
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNLL 616
THY EVNYRTLKAVVFYGPNI HIPH I KDLNLL
Sbjct: 312 THYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLL 347
>ref|YP_005090486.1| ribosomal protein S4 (mitochondrion) [Lotus japonicus]
gi|357197350|gb|AET62946.1| ribosomal protein S4
(mitochondrion) [Lotus japonicus]
Length = 358
Score = 87.0 bits (214), Expect = 8e-15
Identities = 50/96 (52%), Positives = 53/96 (55%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKNR R+RSP + + LY NST S SP LP
Sbjct: 265 NEKNRYLPTRTRSPIVYNS-------------SLYSNSTYCSSSPHQFTMKRRIKRIELP 311
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNLL 616
THY EVNYRTLKAVVFYGPNI HIPH I KDLNLL
Sbjct: 312 THYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLL 347
>ref|YP_003587235.1| ribosomal protein S4 [Citrullus lanatus]
gi|259156791|gb|ACV96653.1| ribosomal protein S4
[Citrullus lanatus]
Length = 355
Score = 86.7 bits (213), Expect = 1e-14
Identities = 49/95 (51%), Positives = 52/95 (54%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKNR R+RSP + + LY NST S SP LP
Sbjct: 262 NEKNRNLPTRTRSPIVYNS-------------SLYSNSTYCSASPHQFTMKSKIKRIELP 308
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNL 613
THY EVNYRTLKAVVFYGPNI HIPH I KDLNL
Sbjct: 309 THYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNL 343
>gb|AHA47128.1| ribosomal protein S4 (mitochondrion) [Amborella trichopoda]
Length = 354
Score = 84.3 bits (207), Expect = 5e-14
Identities = 48/94 (51%), Positives = 51/94 (54%)
Frame = +2
Query: 332 EKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLPT 511
EKNR R+RSP +N LY NST SGSP LPT
Sbjct: 253 EKNREISTRTRSPIVNN-------------GNLYSNSTYCSGSPHRFTRKRRIKRIELPT 299
Query: 512 HYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNL 613
HY EVNYRTLKAVVFYGP+I HIPH I KD NL
Sbjct: 300 HYLEVNYRTLKAVVFYGPDIGHIPHDIRLKDPNL 333
>ref|YP_002000578.1| ribosomal protein S4 [Oryza sativa Japonica Group]
gi|92700092|dbj|BAC19883.2| Ribosomal protein S4 [Oryza
sativa Japonica Group]
Length = 352
Score = 83.2 bits (204), Expect = 1e-13
Identities = 51/96 (53%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Frame = +2
Query: 335 KNRGGMVRSRSPTLNRTR--SPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
K ++R+ NR R SP + K+ LYRNST SGSP LP
Sbjct: 253 KEEEELIRTIGEAENRKRAISPFVYKS-----SLYRNSTYCSGSPFTRKIRIKRI--ELP 305
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNLL 616
THY EVNYRTLKAVVFYGPNI HIPH I KDLNLL
Sbjct: 306 THYLEVNYRTLKAVVFYGPNIGHIPHDIRLKDLNLL 341
>emb|CBX33388.1| ribosomal protein S4 (mitochondrion) [Malus domestica]
Length = 359
Score = 79.3 bits (194), Expect = 2e-12
Identities = 46/95 (48%), Positives = 51/95 (53%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
N+KNR R+RSP + + LYRNST S SP LP
Sbjct: 266 NKKNRNLPTRTRSPIVYNS-------------SLYRNSTYCSASPHQFTMKRRIKRIELP 312
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNL 613
TH EVN+RTLKAVV YGPNI HIPH I KDLNL
Sbjct: 313 THXSEVNHRTLKAVVSYGPNIGHIPHDIRLKDLNL 347
>ref|YP_005090421.1| rps4 gene product (mitochondrion) [Boea hygrometrica]
gi|340549497|gb|AEK53318.1| ribosomal protein S4
(mitochondrion) [Boea hygrometrica]
Length = 329
Score = 78.6 bits (192), Expect = 3e-12
Identities = 45/96 (46%), Positives = 51/96 (53%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKN+ R+R+P + + LY NST S SP LP
Sbjct: 236 NEKNKNIPTRTRNPIVYNS-------------SLYSNSTYCSASPHQFTMKRKIKRIELP 282
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNLL 616
THY EVN+RT KAVVFYGPNI HIPH I KD NLL
Sbjct: 283 THYSEVNHRTPKAVVFYGPNIGHIPHDIRLKDPNLL 318
>ref|XP_004500180.1| PREDICTED: ribosomal protein S4, mitochondrial-like [Cicer
arietinum]
Length = 304
Score = 78.2 bits (191), Expect = 4e-12
Identities = 46/95 (48%), Positives = 50/95 (52%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKNR R+RSP + + LY NST S SP LP
Sbjct: 211 NEKNRYLPTRTRSPIVYNS-------------SLYSNSTYCSSSPHQFTMKRRIKRIELP 257
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNL 613
THY EVN+RT KAVVFYGPNI HIPH I KD NL
Sbjct: 258 THYSEVNHRTPKAVVFYGPNIGHIPHDIRLKDPNL 292
>ref|YP_173472.1| ribosomal protein S4 [Nicotiana tabacum]
Length = 349
Score = 77.8 bits (190), Expect = 5e-12
Identities = 46/96 (47%), Positives = 50/96 (52%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKNR R+RSP + + LY NST S SP LP
Sbjct: 256 NEKNRNIPTRTRSPIVYNS-------------SLYSNSTYCSASPHQFTKKIKIKRIELP 302
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNLL 616
THY EVN+RT KAVV YGPNI HIPH I KD NLL
Sbjct: 303 THYSEVNHRTPKAVVSYGPNIGHIPHDIRLKDPNLL 338
>gb|AHC94278.1| ribosomal protein S4, partial (mitochondrion) [Amborella
trichopoda]
Length = 324
Score = 77.4 bits (189), Expect = 6e-12
Identities = 43/85 (50%), Positives = 46/85 (54%)
Frame = +2
Query: 332 EKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLPT 511
EKNR R+RSP +N LY NST SGSP LPT
Sbjct: 253 EKNREISTRTRSPIVNN-------------GNLYSNSTYCSGSPHRFTRKRRIKRIELPT 299
Query: 512 HYCEVNYRTLKAVVFYGPNIDHIPH 586
HY EVNYRTLKAVVFYGP+I HIPH
Sbjct: 300 HYLEVNYRTLKAVVFYGPDIGHIPH 324
>ref|YP_007889804.1| ribosomal protein S4 (mitochondrion) [Vigna angularis]
gi|478620963|dbj|BAN15009.1| ribosomal protein S4
(mitochondrion) [Vigna angularis]
Length = 346
Score = 77.4 bits (189), Expect = 6e-12
Identities = 45/95 (47%), Positives = 50/95 (52%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKN+ R+RSP + + LY NST S SP LP
Sbjct: 253 NEKNQDLPTRTRSPLVYNS-------------SLYSNSTYCSSSPHPFPRKRRIKRIELP 299
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNL 613
THY EVN+RT KAVVFYGPNI HIPH I KD NL
Sbjct: 300 THYSEVNHRTPKAVVFYGPNIGHIPHDIRLKDPNL 334
>ref|YP_007516900.1| ribosomal protein S4 (mitochondrion) [Glycine max]
gi|403311571|gb|AFR34319.1| ribosomal protein S4
(mitochondrion) [Glycine max]
Length = 346
Score = 77.4 bits (189), Expect = 6e-12
Identities = 45/95 (47%), Positives = 50/95 (52%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKN+ R+RSP + + LY NST S SP LP
Sbjct: 253 NEKNQDLPTRTRSPIVYNS-------------SLYSNSTYCSSSPHPFPRKRRIKRIELP 299
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNL 613
THY EVN+RT KAVVFYGPNI HIPH I KD NL
Sbjct: 300 THYSEVNHRTPKAVVFYGPNIGHIPHDIRLKDPNL 334
>ref|YP_004222821.1| ribosomal protein S4 [Vigna radiata] gi|308206763|gb|ADO19900.1|
ribosomal protein S4 [Vigna radiata]
Length = 346
Score = 77.4 bits (189), Expect = 6e-12
Identities = 45/95 (47%), Positives = 50/95 (52%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKN+ R+RSP + + LY NST S SP LP
Sbjct: 253 NEKNQDLPTRTRSPLVYNS-------------SLYSNSTYCSSSPHPFPRKRRIKRIELP 299
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNL 613
THY EVN+RT KAVVFYGPNI HIPH I KD NL
Sbjct: 300 THYSEVNHRTPKAVVFYGPNIGHIPHDIRLKDPNL 334
>ref|YP_008999590.1| ribosomal protein S4 (mitochondrion) [Vaccinium macrocarpon]
gi|549531665|gb|AGX28804.1| ribosomal protein S4
(mitochondrion) [Vaccinium macrocarpon]
Length = 276
Score = 77.0 bits (188), Expect = 8e-12
Identities = 45/95 (47%), Positives = 50/95 (52%)
Frame = +2
Query: 329 NEKNRGGMVRSRSPTLNRTRSPNLNKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLP 508
NEKNR R+RSP + + LYR+ST S SP LP
Sbjct: 183 NEKNRNLPTRTRSPIVYNS-------------SLYRDSTHCSASPHQFTMKRKMKRIELP 229
Query: 509 THYCEVNYRTLKAVVFYGPNIDHIPHGISKKDLNL 613
THY EVN+RT KAVV YGPNI HIPH I KD NL
Sbjct: 230 THYSEVNHRTPKAVVSYGPNIGHIPHDIRLKDPNL 264
>ref|YP_740450.1| ribosomal protein S4 [Zea luxurians] gi|110287616|gb|ABG65662.1|
ribosomal protein S4 (mitochondrion) [Zea luxurians]
Length = 358
Score = 77.0 bits (188), Expect = 8e-12
Identities = 39/63 (61%), Positives = 41/63 (65%)
Frame = +2
Query: 425 ELYRNSTQFSGSPXXXXXXXXXXXXNLPTHYCEVNYRTLKAVVFYGPNIDHIPHGISKKD 604
+LYRNST SGSP LPTHY EVN+RTLKAVV YGPNI HIPH I KD
Sbjct: 284 KLYRNSTYCSGSPFTITRKIRIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKD 343
Query: 605 LNL 613
NL
Sbjct: 344 PNL 346
>ref|YP_588274.1| ribosomal protein S4 [Zea mays subsp. mays]
gi|114151588|ref|YP_740375.1| ribosomal protein S4 [Zea
perennis] gi|114151655|ref|YP_740407.1| ribosomal
protein S4 [Zea mays subsp. parviglumis]
gi|40795010|gb|AAR91054.1| ribosomal protein S4
(mitochondrion) [Zea mays] gi|93116061|gb|ABE98694.1|
ribosomal protein S4 (mitochondrion) [Zea mays subsp.
mays] gi|93116105|gb|ABE98737.1| ribosomal protein S4
(mitochondrion) [Zea mays subsp. mays]
gi|93116154|gb|ABE98785.1| ribosomal protein S4 [Zea
mays subsp. mays] gi|102567922|gb|ABF70839.1| ribosomal
protein S4 (mitochondrion) [Zea perennis]
gi|102567988|gb|ABF70872.1| ribosomal protein S4
(mitochondrion) [Zea mays subsp. parviglumis]
gi|102579654|gb|ABF70934.1| ribosomal protein S4
(mitochondrion) [Zea mays subsp. mays]
Length = 358
Score = 77.0 bits (188), Expect = 8e-12
Identities = 39/63 (61%), Positives = 41/63 (65%)
Frame = +2
Query: 425 ELYRNSTQFSGSPXXXXXXXXXXXXNLPTHYCEVNYRTLKAVVFYGPNIDHIPHGISKKD 604
+LYRNST SGSP LPTHY EVN+RTLKAVV YGPNI HIPH I KD
Sbjct: 284 KLYRNSTYCSGSPFTITRKIRIKRIELPTHYSEVNHRTLKAVVSYGPNIGHIPHDIRLKD 343
Query: 605 LNL 613
NL
Sbjct: 344 PNL 346
>ref|YP_717175.1| ribosomal protein S4 [Brassica napus] gi|37591124|dbj|BAC98926.1|
ribosomal protein S4 [Brassica napus]
Length = 362
Score = 76.6 bits (187), Expect = 1e-11
Identities = 48/91 (52%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = +2
Query: 356 RSRSPTLN---RTRSPNL-NKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLPTHYCE 523
R + LN RT SP + N +L LY NST SP LPTHY E
Sbjct: 265 RRKEKNLNLPTRTISPIVYNSSLS----LYSNSTYCFASPHKLTMKRRIKRIELPTHYLE 320
Query: 524 VNYRTLKAVVFYGPNIDHIPHGISKKDLNLL 616
VNYRT KAVVFYGPNI HIPH I KDLNLL
Sbjct: 321 VNYRTPKAVVFYGPNIGHIPHDIRLKDLNLL 351
>sp|Q31708.2|RT04_ARATH RecName: Full=Ribosomal protein S4, mitochondrial
Length = 362
Score = 76.6 bits (187), Expect = 1e-11
Identities = 48/91 (52%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Frame = +2
Query: 356 RSRSPTLN---RTRSPNL-NKALGRLAELYRNSTQFSGSPXXXXXXXXXXXXNLPTHYCE 523
R + LN RT SP + N +L LY NST SP LPTHY E
Sbjct: 265 RRKDKNLNLPTRTISPIVYNSSLS----LYSNSTYCFASPHKLTMKRRIKRIELPTHYLE 320
Query: 524 VNYRTLKAVVFYGPNIDHIPHGISKKDLNLL 616
VNYRT KAVVFYGPNI HIPH I KDLNLL
Sbjct: 321 VNYRTPKAVVFYGPNIGHIPHDIRLKDLNLL 351