BLASTX nr result

ID: Papaver27_contig00026271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00026271
         (365 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...    72   6e-11
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]    70   2e-10
ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Popu...    64   2e-08
ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prun...    61   1e-07

>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
           gi|296081598|emb|CBI20603.3| unnamed protein product
           [Vitis vinifera]
          Length = 561

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 43/121 (35%), Positives = 68/121 (56%)
 Frame = -2

Query: 364 SVRGKEVSCESARVSLISVSPDESESTLTRDSFRVSACSSAAVQIVENSSIEREEMKLKT 185
           SV+GKE S +S R S  SV+ ++ ES L +D F+  ACSS A+Q  EN     E MK+K 
Sbjct: 31  SVQGKEASFDSTRFSFPSVTSEDCES-LYKDPFKPFACSSGALQTFENDYSAMEAMKMKI 89

Query: 184 RKAPGIIMYDPFHSITTSVQDERSILNSSFHTNKTSYFGLLVNSLEKVEEIFVDEELIRL 5
            K     ++   ++    + ++ S   +    +K S F LL+ +L+ +EE+F D  ++RL
Sbjct: 90  GKCSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRL 149

Query: 4   E 2
           E
Sbjct: 150 E 150


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 41/120 (34%), Positives = 67/120 (55%)
 Frame = -2

Query: 361 VRGKEVSCESARVSLISVSPDESESTLTRDSFRVSACSSAAVQIVENSSIEREEMKLKTR 182
           ++GKE S +S R S  SV+ ++ ES L +D F+  ACSS A+Q  EN     E MK+K  
Sbjct: 82  IQGKEASFDSTRFSFPSVTSEDCES-LYKDPFKPFACSSGALQTFENDYSAMEAMKMKIG 140

Query: 181 KAPGIIMYDPFHSITTSVQDERSILNSSFHTNKTSYFGLLVNSLEKVEEIFVDEELIRLE 2
           K     ++   ++    + ++ S   +    +K S F LL+ +L+ +EE+F D  ++RLE
Sbjct: 141 KCSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVRLE 200


>ref|XP_002308586.1| hypothetical protein POPTR_0006s25090g [Populus trichocarpa]
           gi|222854562|gb|EEE92109.1| hypothetical protein
           POPTR_0006s25090g [Populus trichocarpa]
          Length = 559

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 39/121 (32%), Positives = 67/121 (55%)
 Frame = -2

Query: 364 SVRGKEVSCESARVSLISVSPDESESTLTRDSFRVSACSSAAVQIVENSSIEREEMKLKT 185
           S RG E S   AR+S +SV  +E +  L + SF+  ACSSAA Q VEN  ++ E +K+  
Sbjct: 31  SARGMEASVNQARLSFLSVVSEEGD-ILNKHSFKSFACSSAA-QNVENDCLQMERLKMNV 88

Query: 184 RKAPGIIMYDPFHSITTSVQDERSILNSSFHTNKTSYFGLLVNSLEKVEEIFVDEELIRL 5
            K   + + +   +   SV++E S  ++      TS    L+++L+ +E++  D + ++L
Sbjct: 89  DKTSHVSINNMMGNDKVSVEEEISTSHTRLRERMTSRISFLLDNLDTLEKLVADLDALKL 148

Query: 4   E 2
           E
Sbjct: 149 E 149


>ref|XP_007222923.1| hypothetical protein PRUPE_ppa003696mg [Prunus persica]
           gi|462419859|gb|EMJ24122.1| hypothetical protein
           PRUPE_ppa003696mg [Prunus persica]
          Length = 555

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 40/121 (33%), Positives = 65/121 (53%)
 Frame = -2

Query: 364 SVRGKEVSCESARVSLISVSPDESESTLTRDSFRVSACSSAAVQIVENSSIEREEMKLKT 185
           SVRG+E S  SAR+S +SV  +E E++ ++D  +V    SA+ QI+E+   E EE+K   
Sbjct: 32  SVRGREGSFNSARLSFLSVISEEGEAS-SKDPLKVYTFPSASPQILEDGVSELEEVKTAF 90

Query: 184 RKAPGIIMYDPFHSITTSVQDERSILNSSFHTNKTSYFGLLVNSLEKVEEIFVDEELIRL 5
           R+ P       F      V + + I +        S+F LL+ +L  +EE F   ++++L
Sbjct: 91  RRVP-----KSFSDNQMPVAEGKFISSKGLEACTASHFSLLLQNLNVLEETFATSDVLKL 145

Query: 4   E 2
           E
Sbjct: 146 E 146


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