BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00023825
         (1143 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus...   346   1e-92
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [...   345   3e-92
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun...   343   6e-92
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I...   343   1e-91
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil...   342   1e-91
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr...   341   4e-91
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun...   340   9e-91
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I...   337   4e-90
ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Caps...   336   1e-89
ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prun...   336   1e-89
ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrat...   336   1e-89
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a...   335   2e-89
ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis ...   334   4e-89
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a...   333   6e-89
ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutr...   332   2e-88
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A...   330   7e-88
ref|XP_007152860.1| hypothetical protein PHAVU_004G166200g [Phas...   328   2e-87
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin...   327   4e-87
gb|AFK38034.1| unknown [Lotus japonicus]                              326   1e-86
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin...   326   1e-86

>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
          Length = 206

 Score =  346 bits (887), Expect = 1e-92
 Identities = 167/203 (82%), Positives = 188/203 (92%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           +DE+ITRL R+R+ VMQML DRGY+VGDFE+  T+ QFL K+G+N+KREDL I K  RN+
Sbjct: 4   SDEEITRLVRVRKNVMQMLKDRGYMVGDFEIDMTKYQFLQKYGENMKREDLVINKGLRNN 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
           + +QIY+FFPEEPKVGVKTMKTYTNRMK + VHRA+L+VQQNLTPFARTCISEIS+KFHL
Sbjct: 64  SSDQIYIFFPEEPKVGVKTMKTYTNRMKEEGVHRAVLIVQQNLTPFARTCISEISTKFHL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQEAE+L+NIKEHVLVPEHQVLTPEEKKTLLERYT+KETQLPRIQITDPIARYYGLKR
Sbjct: 124 EVFQEAEMLINIKEHVLVPEHQVLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYVV 375
           G VVKIIRPSETAGRYVTYRYVV
Sbjct: 184 GHVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
           gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
           family protein [Populus trichocarpa]
          Length = 206

 Score =  345 bits (884), Expect = 3e-92
 Identities = 171/203 (84%), Positives = 188/203 (92%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           T+E+I RL RIR+TVMQML DRGY VGDFE+K TR QF SK+G+N+KREDL I K KRND
Sbjct: 4   TEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRND 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
           + +QIYVFFPEE KVGVKTMKTYTNRMK++ V RA+LVVQQNLTPFARTCI+EIS+KFHL
Sbjct: 64  SSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQEAELLVNIKEHVLVPEHQVL+ EEKKTLLERYT+KETQLPRIQITDPIARYYGLKR
Sbjct: 124 EVFQEAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYVV 375
           GQVVKIIRPSETAGRYVTYRYV+
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVI 206


>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
           gi|462414880|gb|EMJ19617.1| hypothetical protein
           PRUPE_ppa011542mg [Prunus persica]
          Length = 206

 Score =  343 bits (881), Expect = 6e-92
 Identities = 167/202 (82%), Positives = 187/202 (92%)
 Frame = -2

Query: 980 DEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRNDN 801
           +E+ITRLYR+R+TVMQML DR YLVGDFE+  TR QF SK+G+N+KREDL I K KR+D+
Sbjct: 5   EEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDS 64

Query: 800 DEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHLE 621
            +QIYVFFPEEPKVGVKTMKTYTNRMK++ V RA+LV QQNLTPFA+TCISEISSKFHLE
Sbjct: 65  SDQIYVFFPEEPKVGVKTMKTYTNRMKSENVLRAVLVTQQNLTPFAKTCISEISSKFHLE 124

Query: 620 VFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 441
           VFQEAELLVNIKEHVLVPEH VLT EEKKTLLERYT+KETQLPRIQ+TDPIA+YYGLKRG
Sbjct: 125 VFQEAELLVNIKEHVLVPEHLVLTTEEKKTLLERYTVKETQLPRIQVTDPIAKYYGLKRG 184

Query: 440 QVVKIIRPSETAGRYVTYRYVV 375
           QVVKIIRPSETAGRY+TYRYV+
Sbjct: 185 QVVKIIRPSETAGRYITYRYVI 206


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 isoform 1 [Vitis vinifera]
           gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1 isoform 2
           [Vitis vinifera]
          Length = 206

 Score =  343 bits (879), Expect = 1e-91
 Identities = 167/204 (81%), Positives = 190/204 (93%)
 Frame = -2

Query: 986 ATDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRN 807
           A++E+I+RL+RIR+TVMQML DRGY VGDFE+  T+ QF+SKFG+N+KREDL I K KR 
Sbjct: 3   ASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRT 62

Query: 806 DNDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFH 627
           D+ +QIYVFFPEE KVGVKTMKTYTNRMK++ V RA+LVVQQNLTPFARTCI+EIS+KFH
Sbjct: 63  DSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFH 122

Query: 626 LEVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLK 447
           LEVFQEAELLVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQ++DPIARY+GLK
Sbjct: 123 LEVFQEAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLK 182

Query: 446 RGQVVKIIRPSETAGRYVTYRYVV 375
           RGQVVKIIRPSETAGRY+TYRYVV
Sbjct: 183 RGQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 206

 Score =  342 bits (878), Expect = 1e-91
 Identities = 166/203 (81%), Positives = 189/203 (93%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           +D++I RL+RIR+TVMQML DRGY VGDFE+  T+AQF+SK+G+N+KREDL I K KRND
Sbjct: 4   SDDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRND 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
           N +QIYVFFP+E KVGVKTMKTYTNRMK++ V RA+LVVQQNLTPFARTCI+EISSKFHL
Sbjct: 64  NSDQIYVFFPDEAKVGVKTMKTYTNRMKSENVFRAVLVVQQNLTPFARTCINEISSKFHL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQE+ELLVN+KEH LVPEHQVLT EEKKTLL+RYT+KETQLPRIQ++DPIARYYGLKR
Sbjct: 124 EVFQESELLVNVKEHSLVPEHQVLTNEEKKTLLQRYTVKETQLPRIQVSDPIARYYGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYVV 375
           GQVVKIIRPSETAGRYVTYRYVV
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|567918420|ref|XP_006451216.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
           gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Citrus sinensis] gi|568843558|ref|XP_006475671.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like isoform X2 [Citrus sinensis]
           gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X3
           [Citrus sinensis] gi|557554441|gb|ESR64455.1|
           hypothetical protein CICLE_v10009504mg [Citrus
           clementina] gi|557554442|gb|ESR64456.1| hypothetical
           protein CICLE_v10009504mg [Citrus clementina]
          Length = 206

 Score =  341 bits (874), Expect = 4e-91
 Identities = 167/203 (82%), Positives = 187/203 (92%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           +DE+I RL+RIRRTVMQML DRGY VGDFE+  ++ QF++KFG+N+KREDL I K  RND
Sbjct: 4   SDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRND 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
           + +QIYVFFP+E KVGVKTMKTYTNRMK++ V RA+LVVQQNLTPFARTCI EIS+KFHL
Sbjct: 64  SSDQIYVFFPDEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCIQEISAKFHL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQEAELLVNIKEHVLVPEHQVLT EEKKTLL+RYT+KETQLPRIQ+TDPIARYYGLKR
Sbjct: 124 EVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLKRYTVKETQLPRIQVTDPIARYYGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYVV 375
           GQVVKIIRPSETAGRYVTYRYVV
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVV 206


>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score =  340 bits (871), Expect = 9e-91
 Identities = 167/202 (82%), Positives = 187/202 (92%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           ++++ITRL+RIRRTVMQML DR YLVGDFEL  T+ QF +K+G+N+KREDL I K +RND
Sbjct: 4   SEDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRND 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
           + +QIYVFFPEE KVGVKTMKTY NRMK++ V RA+LVVQQNLTPFARTCISEIS+KFHL
Sbjct: 64  SPDQIYVFFPEEQKVGVKTMKTYINRMKSENVLRAVLVVQQNLTPFARTCISEISTKFHL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQEAELLVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQ+TDPIARYYGLKR
Sbjct: 124 EVFQEAELLVNIKEHVLVPEHQVLTNEEKKTLLERYTVKETQLPRIQVTDPIARYYGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYV 378
           GQVVKIIRPSETAGRY+TYRYV
Sbjct: 184 GQVVKIIRPSETAGRYITYRYV 205


>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like isoform 1 [Solanum lycopersicum]
           gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           isoform 2 [Solanum lycopersicum]
          Length = 206

 Score =  337 bits (865), Expect = 4e-90
 Identities = 158/203 (77%), Positives = 192/203 (94%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           ++E++++L+R+R+T+M+ML+DRGYLVGDFE+  ++ QFL K+G+N+KREDL I+K KRN+
Sbjct: 4   SEEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAKRNN 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
           + +QIYVFFPEEPKVGVKTMKTYT RMK ++V +A+L+VQQNLTPFARTCISEIS+KFHL
Sbjct: 64  SSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFHL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQEAE+LVNIK HVL+PEHQ+L+PEEKKTLLERYT+KETQLPRIQITDPIARYYGLKR
Sbjct: 124 EVFQEAEMLVNIKNHVLIPEHQLLSPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYVV 375
           GQVVKIIRPSETAGRY+TYRYVV
Sbjct: 184 GQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_006298572.1| hypothetical protein CARUB_v10014656mg [Capsella rubella]
           gi|482567281|gb|EOA31470.1| hypothetical protein
           CARUB_v10014656mg [Capsella rubella]
          Length = 205

 Score =  336 bits (862), Expect = 1e-89
 Identities = 163/205 (79%), Positives = 185/205 (90%)
 Frame = -2

Query: 989 MATDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKR 810
           M T+E+I RLYRI +T+MQML DRGY + D E+  T+ QF+ K+GDN+KREDL   K KR
Sbjct: 1   MLTEEEIKRLYRIHKTLMQMLKDRGYFIADSEITITKQQFIRKYGDNMKREDLVTLKAKR 60

Query: 809 NDNDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKF 630
           NDN +Q+Y+FFP+E KVGVKTMK YTNRMK++ V+RA+LVVQQNLTPFARTCISEISSKF
Sbjct: 61  NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKF 120

Query: 629 HLEVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGL 450
           HLEVFQEAE+LVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQ+TDPIARY+GL
Sbjct: 121 HLEVFQEAEMLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVTDPIARYFGL 180

Query: 449 KRGQVVKIIRPSETAGRYVTYRYVV 375
           KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 KRGQVVKIIRPSETAGRYVTYRYVV 205


>ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prunus persica]
           gi|462416214|gb|EMJ20951.1| hypothetical protein
           PRUPE_ppa024345mg [Prunus persica]
          Length = 206

 Score =  336 bits (861), Expect = 1e-89
 Identities = 160/202 (79%), Positives = 185/202 (91%)
 Frame = -2

Query: 980 DEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRNDN 801
           +E+ITRLYR+RRTVMQML DR YLVGDFE+  TR QF +K+G+N+KREDL I K KRND+
Sbjct: 5   EEEITRLYRVRRTVMQMLRDRKYLVGDFEINMTREQFKAKYGENMKREDLTINKTKRNDS 64

Query: 800 DEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHLE 621
            +Q+YVFFPEEPKVGVKT+KTYTNRMK+D V RA+LV QQN+TP ARTCISEISSKFH+E
Sbjct: 65  TDQLYVFFPEEPKVGVKTIKTYTNRMKSDNVARAILVTQQNMTPMARTCISEISSKFHME 124

Query: 620 VFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 441
           VFQE EL+VN+ EHVLVPEHQ+LT EEKKTLLERYT+KETQLPRIQ+TDP+A+YYGLKRG
Sbjct: 125 VFQEPELMVNVTEHVLVPEHQLLTNEEKKTLLERYTVKETQLPRIQLTDPVAKYYGLKRG 184

Query: 440 QVVKIIRPSETAGRYVTYRYVV 375
           QV+KIIRPSETAGRY+TYRYVV
Sbjct: 185 QVMKIIRPSETAGRYITYRYVV 206


>ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
           gi|297331338|gb|EFH61757.1| ATRPABC24.3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 205

 Score =  336 bits (861), Expect = 1e-89
 Identities = 164/205 (80%), Positives = 185/205 (90%)
 Frame = -2

Query: 989 MATDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKR 810
           M T+E+I RLYRI++T+MQML DRGY + D EL  T+ QF+ K GDN+KREDL   K KR
Sbjct: 1   MLTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKR 60

Query: 809 NDNDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKF 630
           NDN +Q+Y+FFP+E KVGVKTMK YTNRMK++ V+RA+LVVQQNLTPFARTCISEISSKF
Sbjct: 61  NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKF 120

Query: 629 HLEVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGL 450
           HLEVFQEAE+LVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQ+TDPIARY+GL
Sbjct: 121 HLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGL 180

Query: 449 KRGQVVKIIRPSETAGRYVTYRYVV 375
           KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 KRGQVVKIIRPSETAGRYVTYRYVV 205


>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Solanum tuberosum]
          Length = 206

 Score =  335 bits (860), Expect = 2e-89
 Identities = 158/203 (77%), Positives = 190/203 (93%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           ++E+++RL+R+R+T+M+ML+DRGYLVGDFE+  ++ +FL K+G+N+KREDL ++K KRN+
Sbjct: 4   SEEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKYEFLQKYGENMKREDLVLQKAKRNN 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
           + +QIYVFFPEEPKVGVKTMKTYT RMK ++V +A+L+VQQNLTPFARTCISEIS KFHL
Sbjct: 64  SSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISIKFHL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQEAE+LVNIK HVL+P+HQ LTPEEKKTLLERYT+KETQLPRIQITDPIARYYGLKR
Sbjct: 124 EVFQEAEMLVNIKNHVLIPKHQTLTPEEKKTLLERYTVKETQLPRIQITDPIARYYGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYVV 375
           GQVVKIIRPSETAGRYVTYRYVV
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVV 206


>ref|NP_188871.1| DNA-directed RNA polymerase NRPB5 [Arabidopsis thaliana]
           gi|75275037|sp|O81098.1|RPB5A_ARATH RecName:
           Full=DNA-directed RNA polymerases II and IV subunit 5A;
           Short=RPB5a; AltName: Full=DNA-directed RNA polymerase
           II subunit E; AltName: Full=RNA polymerase I, II and III
           24.3 kDa subunit; Short=AtRPB24.3
           gi|13899113|gb|AAK48978.1|AF370551_1 RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|15724322|gb|AAL06554.1|AF412101_1 AT3g22320/MCB17_5
           [Arabidopsis thaliana] gi|3372233|gb|AAC28253.1| RNA
           polymerase I, II and III 24.3 kDa subunit [Arabidopsis
           thaliana] gi|9293866|dbj|BAB01769.1| RNA polymerase I,
           II and III 24.3 kDa subunit [Arabidopsis thaliana]
           gi|21554280|gb|AAM63355.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|25083949|gb|AAN72141.1| RNA polymerase I, II and III
           24.3 kDa subunit [Arabidopsis thaliana]
           gi|332643100|gb|AEE76621.1| DNA-directed RNA polymerase
           NRPB5 [Arabidopsis thaliana]
          Length = 205

 Score =  334 bits (857), Expect = 4e-89
 Identities = 163/205 (79%), Positives = 184/205 (89%)
 Frame = -2

Query: 989 MATDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKR 810
           M T+E++ RLYRI++T+MQML DRGY + D EL  T+ QF+ K GDN+KREDL   K KR
Sbjct: 1   MLTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKR 60

Query: 809 NDNDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKF 630
           NDN +Q+Y+FFP+E KVGVKTMK YTNRMK++ V RA+LVVQQNLTPFARTCISEISSKF
Sbjct: 61  NDNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKF 120

Query: 629 HLEVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGL 450
           HLEVFQEAE+LVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQ+TDPIARY+GL
Sbjct: 121 HLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGL 180

Query: 449 KRGQVVKIIRPSETAGRYVTYRYVV 375
           KRGQVVKIIRPSETAGRYVTYRYVV
Sbjct: 181 KRGQVVKIIRPSETAGRYVTYRYVV 205


>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Solanum tuberosum]
          Length = 206

 Score =  333 bits (855), Expect = 6e-89
 Identities = 156/203 (76%), Positives = 191/203 (94%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           ++E+++RL+R+R+T+M+ML+DRGYLVGDFE+  ++ QFL K+G+N+KREDL ++K KRN+
Sbjct: 4   SEEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVLQKAKRNN 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
           + +QIYVFFPEEPKVGVKTMKTYT RMK ++V +A+L+VQQNLTPFARTCISEIS+KFHL
Sbjct: 64  SSDQIYVFFPEEPKVGVKTMKTYTERMKKEDVFQAILIVQQNLTPFARTCISEISTKFHL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQEAE+LVNIK HVL+PEH +L+PEEKK+LLERYT+KETQLPRIQITDPIARYYGLKR
Sbjct: 124 EVFQEAEMLVNIKNHVLIPEHLLLSPEEKKSLLERYTVKETQLPRIQITDPIARYYGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYVV 375
           GQVVKIIRPSETAGRY+TYRYVV
Sbjct: 184 GQVVKIIRPSETAGRYITYRYVV 206


>ref|XP_006406183.1| hypothetical protein EUTSA_v10021534mg [Eutrema salsugineum]
           gi|557107329|gb|ESQ47636.1| hypothetical protein
           EUTSA_v10021534mg [Eutrema salsugineum]
          Length = 206

 Score =  332 bits (851), Expect = 2e-88
 Identities = 162/203 (79%), Positives = 183/203 (90%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           T+E+I RLYRI++T+MQML DRGY + D E+  T  QF+ K GDN+KREDL   K KRND
Sbjct: 4   TEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMTLGQFIRKHGDNMKREDLVTLKAKRND 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
           N++Q+Y+FFP+E KVGVKTMK YTNRMK++ V RA+LVVQQNLTPFARTCISEISSKFHL
Sbjct: 64  NNDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFHL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQEAE+LVNIKEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQ+TDPIARY+GLKR
Sbjct: 124 EVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYVV 375
           GQVVKIIRPSETAGRYVTYRYVV
Sbjct: 184 GQVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
           gi|548863022|gb|ERN20377.1| hypothetical protein
           AMTR_s00068p00034280 [Amborella trichopoda]
          Length = 206

 Score =  330 bits (846), Expect = 7e-88
 Identities = 161/202 (79%), Positives = 182/202 (90%)
 Frame = -2

Query: 980 DEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRNDN 801
           D+  ++L+RIRRT+MQML DRGYLVGDFE+  T+AQF+ KFGD +K++DL I K  RN+ 
Sbjct: 5   DDQTSKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKTMRNNP 64

Query: 800 DEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHLE 621
            EQIYVFFPEE KVGVKT+KTYT RMK++ V RA+LV+QQNLTPFAR C+ EIS+KFHLE
Sbjct: 65  SEQIYVFFPEEQKVGVKTVKTYTERMKSENVFRAILVLQQNLTPFARQCVQEISAKFHLE 124

Query: 620 VFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 441
           +FQE+ELLVNIKEHVLVPEHQVLT EEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG
Sbjct: 125 IFQESELLVNIKEHVLVPEHQVLTSEEKKTLLERYTLKETQLPRIQITDPIARYYGLKRG 184

Query: 440 QVVKIIRPSETAGRYVTYRYVV 375
           QVVKIIRPSETAGRYVTYRYVV
Sbjct: 185 QVVKIIRPSETAGRYVTYRYVV 206


>ref|XP_007152860.1| hypothetical protein PHAVU_004G166200g [Phaseolus vulgaris]
           gi|561026169|gb|ESW24854.1| hypothetical protein
           PHAVU_004G166200g [Phaseolus vulgaris]
          Length = 207

 Score =  328 bits (842), Expect = 2e-87
 Identities = 160/204 (78%), Positives = 184/204 (90%), Gaps = 1/204 (0%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFG-DNLKREDLDIKKQKRN 807
           TDE+I+RLYRIR+TVM ML DRGYLVGDFE+  ++ +F S  G +N+KREDLD+ K K++
Sbjct: 4   TDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKKD 63

Query: 806 DNDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFH 627
           ++ +QIYVFFP+E KVGVKTMKTYTNRM ND V+RA+LV Q NLTPFARTC+SEISSKFH
Sbjct: 64  NSSDQIYVFFPDEAKVGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISSKFH 123

Query: 626 LEVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLK 447
           LEVFQEAELLVNIKEH LVPEHQVLT  EKKTL+ERYT+KETQLPRIQ+TDP+ARYYGLK
Sbjct: 124 LEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLK 183

Query: 446 RGQVVKIIRPSETAGRYVTYRYVV 375
           RGQVVKIIRPSETAGRYVTYR+VV
Sbjct: 184 RGQVVKIIRPSETAGRYVTYRFVV 207


>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
           gi|255625665|gb|ACU13177.1| unknown [Glycine max]
          Length = 206

 Score =  327 bits (839), Expect = 4e-87
 Identities = 158/203 (77%), Positives = 186/203 (91%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           ++E++ RLYRIR+TVMQML DRG+LVGDFE+  ++ +F SK+G+++KREDL I K K+++
Sbjct: 4   SEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDN 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
           + +QIYVFFP+EPKVGVKTMKTYTNRM ++ V+RA+LV Q NLTPFARTCISEISSKFHL
Sbjct: 64  SGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQEAELLVNIKEH LVPEHQVLT  EKKTLLERYT+KETQLPRIQ+TDP+ARYYGLKR
Sbjct: 124 EVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYVV 375
           GQVVKIIRPSETAGRYVTYR+VV
Sbjct: 184 GQVVKIIRPSETAGRYVTYRFVV 206


>gb|AFK38034.1| unknown [Lotus japonicus]
          Length = 206

 Score =  326 bits (836), Expect = 1e-86
 Identities = 158/203 (77%), Positives = 182/203 (89%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           T+EDIT+L+RIR+TVMQML DR YLVGDFE+  +R +F +K+GDN+KREDL I K K++ 
Sbjct: 4   TEEDITKLHRIRKTVMQMLRDRNYLVGDFEINMSRHEFKTKYGDNMKREDLTINKTKKDG 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
             +QIYVFFP+EPKVGVKTMKTYTNRM ++ V RA+LV Q NLTPFA+TCISE+SSKF L
Sbjct: 64  PSDQIYVFFPDEPKVGVKTMKTYTNRMNSENVFRAILVCQSNLTPFAKTCISEMSSKFQL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQEAELLVNIKEHVLVPEHQ+L   EKKTLLERYT+KETQLPRIQITDP+ARYYGLKR
Sbjct: 124 EVFQEAELLVNIKEHVLVPEHQILNETEKKTLLERYTVKETQLPRIQITDPVARYYGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYVV 375
           GQVVKIIRPSETAGRY+TYR+VV
Sbjct: 184 GQVVKIIRPSETAGRYITYRFVV 206


>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
           gi|255627545|gb|ACU14117.1| unknown [Glycine max]
          Length = 206

 Score =  326 bits (836), Expect = 1e-86
 Identities = 158/203 (77%), Positives = 185/203 (91%)
 Frame = -2

Query: 983 TDEDITRLYRIRRTVMQMLNDRGYLVGDFELKETRAQFLSKFGDNLKREDLDIKKQKRND 804
           ++E+I RLYRIR+TVMQML DR +LVGDFE+  ++ +F SK+G+++KREDL I K K+++
Sbjct: 4   SEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKDN 63

Query: 803 NDEQIYVFFPEEPKVGVKTMKTYTNRMKNDEVHRALLVVQQNLTPFARTCISEISSKFHL 624
           + +QIYVFFP+EPKVGVKTMKTYTNRM ++ V+RA+LV Q NLTPFARTCISEISSKFHL
Sbjct: 64  SGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSKFHL 123

Query: 623 EVFQEAELLVNIKEHVLVPEHQVLTPEEKKTLLERYTLKETQLPRIQITDPIARYYGLKR 444
           EVFQEAELLVNIKEH LVPEHQVLT  EKKTLLERYT+KETQLPRIQ+TDP+ARYYGLKR
Sbjct: 124 EVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYGLKR 183

Query: 443 GQVVKIIRPSETAGRYVTYRYVV 375
           GQVVKIIRPSETAGRYVTYR+VV
Sbjct: 184 GQVVKIIRPSETAGRYVTYRFVV 206