BLASTX nr result
ID: Papaver27_contig00023405
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00023405
(1815 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 336 e-145
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 317 e-138
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 332 e-138
ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [S... 318 e-137
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 328 e-137
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc... 321 e-137
ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group] g... 317 e-137
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 317 e-136
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 325 e-136
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 316 e-136
gb|AAB82754.1| retrofit [Oryza longistaminata] 328 e-135
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 327 e-135
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 317 e-135
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera] 314 e-135
gb|EMT21953.1| ABC transporter C family member 10 [Aegilops taus... 311 e-134
emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera] 325 e-134
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 315 e-133
emb|CCH50966.1| T4.5 [Malus x robusta] 326 e-133
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 307 e-133
gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sa... 304 e-132
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 336 bits (862), Expect(3) = e-145
Identities = 173/352 (49%), Positives = 236/352 (67%), Gaps = 3/352 (0%)
Frame = +2
Query: 182 STAPPSVSNNHSMTIRGKQGIFKPKVYASEVQNVCEDITVPTCYTEACKDPRWRAVMDEE 361
ST+ P +N H M R K GI K KVY S I+ PT +T+A KD W M++E
Sbjct: 678 STSEPHPTNQHPMVTRAKNGISKKKVYFSS------HISEPTTFTQAVKDSNWVLAMEKE 731
Query: 362 ITSLLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQD 541
++L +N TWHLV S N+IG K ++K+K K GT++R+KAR+VA+G+ Q GL+Y +
Sbjct: 732 FSALQRNNTWHLVPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLBYFE 791
Query: 542 IFSPVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNHV 721
FSPVVK +TI++I++++L W + QLDV+NAFLHG+L+E VFM QP G+ + P+HV
Sbjct: 792 TFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFLHGDLEEHVFMQQPPGFINSQYPSHV 851
Query: 722 CKLKKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLV 901
CKL K+LYGLKQAPRAW+ +LS+ LL GFQAS+ D+S+F + L +LIYVD LV
Sbjct: 852 CKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTHDVLILLIYVDDILV 911
Query: 902 TGISTLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNMT 1081
TG S+ + + +T L+ FA++DLG ++ FLGI+ R+ HLSQ +Y +LL +T M
Sbjct: 912 TGSSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQHKYTQDLLSRTAML 971
Query: 1082 FSKPYSTP---FAATTGVDSSPLFDDPALYRSVVGALQYATITRPDIYFAVN 1228
SKP +TP + +D P F D LYRS VGALQY T+TRPDI FAVN
Sbjct: 972 DSKPATTPGLLGQTLSHLDGEP-FSDATLYRSTVGALQYLTLTRPDISFAVN 1022
Score = 196 bits (498), Expect(3) = e-145
Identities = 94/159 (59%), Positives = 114/159 (71%)
Frame = +3
Query: 1230 ACQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTG 1409
ACQ M +PT HW AVKRILRYL+GTL + +Q + S+SL + ++DADWA DRRSTG
Sbjct: 1024 ACQFMATPTTTHWLAVKRILRYLKGTLSYGIQMQQSTSLDIHGYTDADWASCPDDRRSTG 1083
Query: 1410 GMAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVL 1589
G IFLGPNL+SW S KQK VSRSS E+EYRALA AT E++WIQ +L EL SS P+L
Sbjct: 1084 GYGIFLGPNLVSWSSNKQKVVSRSSAESEYRALASATSEMIWIQYVLQELCLSSSSPPLL 1143
Query: 1590 WCDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKAL 1706
WCDN A L ANP+FH R KHI + H+ R+ V+ K L
Sbjct: 1144 WCDNKSAAHLAANPVFHARTKHIEMDLHFIRDHVLRKQL 1182
Score = 35.0 bits (79), Expect(3) = e-145
Identities = 16/35 (45%), Positives = 25/35 (71%)
Frame = +2
Query: 1709 VRLISTQDQLVDIFTKGLSSSRFATLRLKLSVSDS 1813
++ + + +Q+ DIFTK +SSS+F + R KLSV S
Sbjct: 1184 IQYLPSAEQVADIFTKHISSSQFLSFRTKLSVVPS 1218
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 317 bits (813), Expect(3) = e-138
Identities = 169/348 (48%), Positives = 227/348 (65%), Gaps = 9/348 (2%)
Frame = +2
Query: 227 RGKQGIFKPKVYAS---EVQNVCEDITVPTCYTEACKDPRWRAVMDEEITSLLQNGTWHL 397
R + GI KPK + N IT P+ +EA DP+WRA M+ E +L +N TW L
Sbjct: 897 RLQHGISKPKQFTDGTVRYGNAAARITEPSSVSEALADPQWRAAMEAEFQALQKNNTWTL 956
Query: 398 VQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQDIFSPVVKPTTIK 577
V + N+I K +FK+K A G+I+R KAR+VAKG+ Q G+DY D FSPVVK +TI+
Sbjct: 957 VPPDRTRNLIDCKWVFKVKYNADGSIDRLKARLVAKGFKQQYGIDYDDTFSPVVKHSTIR 1016
Query: 578 MIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNHVCKLKKSLYGLKQ 757
+++S+++ ++W +RQLDV+NAFLHG L+E V+M QP G+AD PN+ C L+KSLYGLKQ
Sbjct: 1017 LVLSLAVSQKWSLRQLDVQNAFLHGILEETVYMKQPPGFADTTHPNYHCHLQKSLYGLKQ 1076
Query: 758 APRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLVTGISTLTIDNLL 937
PRAW++RLS L GF SK D SLF S+A+Y+L+YVD ++TG S IDN+L
Sbjct: 1077 RPRAWYSRLSEKLQSLGFVPSKADVSLFIYNAHSTAIYILVYVDDIIITGSSPHAIDNVL 1136
Query: 938 TALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNMTFSKPYSTPFA-- 1111
L +FAIKDLG+LH FLGI+ R GL L QE+Y +LL + M KP TP A
Sbjct: 1137 AKLKDDFAIKDLGDLHYFLGIEVHRKGDGLLLCQEKYARDLLKRVGMECCKPVHTPVATS 1196
Query: 1112 ----ATTGVDSSPLFDDPALYRSVVGALQYATITRPDIYFAVNSLSTY 1243
A+ G SP ++ YRSVVGALQY T+TRPD+ +A+N + +
Sbjct: 1197 EKLSASAGTLLSP--EETTKYRSVVGALQYLTLTRPDLSYAINRVCQF 1242
Score = 196 bits (498), Expect(3) = e-138
Identities = 96/158 (60%), Positives = 120/158 (75%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ + +PT+ HWTAVKRILR +Q T+G L + S SL + AFSDADWAG DR+STGG
Sbjct: 1240 CQFLHAPTDLHWTAVKRILRNIQHTIGLGLTIRPSLSLMLSAFSDADWAGCPDDRKSTGG 1299
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+FLGPNLISW S+KQ TVSRSSTEAEY+A+A+AT EV+W+QSLL EL + P LW
Sbjct: 1300 YALFLGPNLISWNSKKQSTVSRSSTEAEYKAMANATAEVIWLQSLLHELGIRLTGIPRLW 1359
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKAL 1706
CDN+ AT L++ PIF+ R KHI + FH+ R+ V+SK L
Sbjct: 1360 CDNLGATYLSSKPIFNARTKHIEVDFHFVRDRVLSKKL 1397
Score = 30.0 bits (66), Expect(3) = e-138
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLR 1789
+ +RLIST DQ+ D FTK L+ R R
Sbjct: 1397 LDIRLISTNDQVADGFTKALTIGRLNEFR 1425
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 332 bits (852), Expect(3) = e-138
Identities = 173/343 (50%), Positives = 235/343 (68%), Gaps = 6/343 (1%)
Frame = +2
Query: 233 KQGIFKPKVYASE-VQNVCEDIT-VPTCYTEACKDPRWRAVMDEEITSLLQNGTWHLVQV 406
++GI K K+Y V+ C T P +A D W+ MD + T+LL N TWHLV
Sbjct: 723 QKGIRKEKIYTDRTVKYGCLTTTGEPRDLHDALHDTNWKHAMDAKFTALLHNKTWHLVPP 782
Query: 407 NSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQDIFSPVVKPTTIKMII 586
G N+I YK ++KIKRK G+++R+KAR+VAKG+ Q G+DY+D FSPVVK TI++I+
Sbjct: 783 QKGRNIIDYKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRIIL 842
Query: 587 SISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNHVCKLKKSLYGLKQAPR 766
SI++ + W +RQLDV+NAFLHG L+EEV+M QP GY DK+ P++VCKL K+LYGLKQAPR
Sbjct: 843 SIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYEDKVHPDYVCKLDKALYGLKQAPR 902
Query: 767 AWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLVTGISTLTIDNLLTAL 946
AW+A+LS L H GFQ SK DTSLFF ++VL+YVD +V + LL L
Sbjct: 903 AWYAKLSQKLQHLGFQGSKADTSLFFYNKGGLIIFVLVYVDDIIVASSRQDAVPALLKDL 962
Query: 947 SKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNMTFSKPYSTPFAAT--T 1120
K+FA+KDLG+LH FLGI+ ++ S+G+ L+QE+Y+++LL + MT KP STP + +
Sbjct: 963 QKDFALKDLGDLHYFLGIEVNKASSGIVLTQEKYVTDLLRRVGMTDCKPVSTPLSTSEKL 1022
Query: 1121 GVDSSPLF--DDPALYRSVVGALQYATITRPDIYFAVNSLSTY 1243
+ L +D + YRSVVGALQY T+TRPDIYF VN + +
Sbjct: 1023 TLHEGDLLGPNDASNYRSVVGALQYLTLTRPDIYFPVNKVCQF 1065
Score = 181 bits (460), Expect(3) = e-138
Identities = 87/164 (53%), Positives = 113/164 (68%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ + +PT HW A+KRILRYL+ L+ S S+ V +SDADWAG+ DRRSTGG
Sbjct: 1063 CQFLHAPTIVHWAAMKRILRYLKQCTKLGLKISKSKSMLVSGYSDADWAGNIDDRRSTGG 1122
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+FLG NL+SW ++KQ TV RSSTE+EY+ALA+AT E++WIQ+LL EL PS LW
Sbjct: 1123 FAVFLGDNLVSWNAKKQATVPRSSTESEYKALANATAEIMWIQTLLEELSVPSPPMARLW 1182
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKALRYGSFP 1724
CDN+ A L++NP+FH R KHI + +H+ RE + K L P
Sbjct: 1183 CDNLGAKYLSSNPVFHARTKHIEVDYHFVRERMQRKLLEVEFIP 1226
Score = 28.1 bits (61), Expect(3) = e-138
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLRLKLSV 1804
++V I T DQ+ D FTK LS+ + + L+V
Sbjct: 1220 LEVEFIPTGDQVADGFTKALSARQLENFKYNLNV 1253
>ref|XP_002442174.1| hypothetical protein SORBIDRAFT_08g015513 [Sorghum bicolor]
gi|241942867|gb|EES16012.1| hypothetical protein
SORBIDRAFT_08g015513 [Sorghum bicolor]
Length = 757
Score = 318 bits (814), Expect(3) = e-137
Identities = 176/368 (47%), Positives = 238/368 (64%), Gaps = 13/368 (3%)
Frame = +2
Query: 179 TSTAPPSVSN---NHSMTIRGKQGIFKPKVYASE------VQNVCEDITVPTCYTEACKD 331
+S A P S N R + GI KPK+Y + N + T PT A D
Sbjct: 209 SSAASPEFSTEPENPRPATRLQSGIIKPKIYTDGTVRWGMLANTAD--TEPTTVERALSD 266
Query: 332 PRWRAVMDEEITSLLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGY 511
P+W MD E +LL+N TW LV G N+IG K ++K+KR+A G+++R+KAR+VAKG+
Sbjct: 267 PKWVEAMDVEHDALLRNKTWKLVPRPRGENIIGCKWLYKVKRRADGSVDRYKARLVAKGF 326
Query: 512 NQI*GLDYQDIFSPVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSG 691
Q G+DY+D FSPVVK TI++I+SI++ W +RQLDV+NAFLHG L EE +M QP G
Sbjct: 327 KQRYGIDYEDTFSPVVKAATIRLILSIAVSNGWLLRQLDVQNAFLHGVLDEEDYMDQPLG 386
Query: 692 YADKLLPNHVCKLKKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALY 871
Y KL P +VCKL+K+LY LKQAPRAW+ARLSS L+ F++S+ DTSLF+ ++
Sbjct: 387 YVSKLHPGYVCKLEKALYELKQAPRAWYARLSSKLISLRFKSSRADTSLFYYNKGGHTIF 446
Query: 872 VLIYVDGNLVTGISTLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYI 1051
VL+YVD +V S LL+ L K+FA+KDLG+LH FLGI+ R+S GL LSQ +Y
Sbjct: 447 VLVYVDDIIVASSSLEATKVLLSDLQKDFALKDLGDLHYFLGIEVKRDSNGLVLSQGKYA 506
Query: 1052 SNLLHKTNMTFSKPYSTPFAATTGV---DSSPL-FDDPALYRSVVGALQYATITRPDIYF 1219
+++L ++ M+ SKP TP +T + D L +D YRS+VGALQY T+TRPDI F
Sbjct: 507 NDILVRSGMSKSKPVHTPLPSTQKISITDGDKLGEEDCTRYRSLVGALQYLTLTRPDISF 566
Query: 1220 AVNSLSTY 1243
AVN + +
Sbjct: 567 AVNKVCQF 574
Score = 193 bits (490), Expect(3) = e-137
Identities = 97/158 (61%), Positives = 115/158 (72%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ + +PT H +AVKRILRY+QGT F L+ + S V AFS ADWAGD DRRSTGG
Sbjct: 572 CQFLHAPTTTHLSAVKRILRYIQGTSKFGLRIRKSKCRIVSAFSYADWAGDVDDRRSTGG 631
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+FLG NLISW ++KQ TVSRSSTEAEY+ALA+AT EV+W+Q LL EL P +R LW
Sbjct: 632 FAVFLGENLISWTAQKQATVSRSSTEAEYKALANATAEVMWVQKLLAELCVPHARVARLW 691
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKAL 1706
CDN+ A L+ANP+FH R KHI I FH+ RE V K L
Sbjct: 692 CDNLGAKYLSANPVFHARTKHIEIDFHFVRERVAQKLL 729
Score = 29.6 bits (65), Expect(3) = e-137
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLR 1789
+ +R IS++DQL D FTK L ++F R
Sbjct: 729 LDIRFISSEDQLADGFTKSLPVTKFHKFR 757
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea mays]
Length = 1313
Score = 328 bits (840), Expect(3) = e-137
Identities = 176/345 (51%), Positives = 239/345 (69%), Gaps = 6/345 (1%)
Frame = +2
Query: 227 RGKQGIFKPKVYAS-EVQNVCEDIT-VPTCYTEACKDPRWRAVMDEEITSLLQNGTWHLV 400
R +QG+ KPKVY ++ C + P EA D W+ MD E ++L++N TWHLV
Sbjct: 778 RLQQGVRKPKVYTDGTIRYGCFTSSGEPYDLNEALGDVNWKDAMDIEYSALMKNKTWHLV 837
Query: 401 QVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQDIFSPVVKPTTIKM 580
G NVIG K ++KIKRKA G+++R+KAR+VAKGY Q G+DY D FSPVVK TI++
Sbjct: 838 PPKKGRNVIGCKWVYKIKRKADGSLDRYKARLVAKGYKQQYGIDYDDTFSPVVKHATIRI 897
Query: 581 IISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNHVCKLKKSLYGLKQA 760
I+SI++ + W + QLDV+NAFLHG L+EEV+M QP GY D N+VCKL K+LYGLKQA
Sbjct: 898 ILSIAVSRGWSLCQLDVQNAFLHGVLEEEVYMQQPPGYEDSTKLNYVCKLDKALYGLKQA 957
Query: 761 PRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLVTGISTLTIDNLLT 940
PRAW++RLS+ LL GFQASK DTSLFF S ++VL+YVD +V + + LL+
Sbjct: 958 PRAWYSRLSNKLLSLGFQASKADTSLFFYNKGSVTIFVLVYVDDIIVASSTHKATEALLS 1017
Query: 941 ALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNMTFSKPYSTPFAATT 1120
L+KEFA+KDLG+L+ FLGI+ ++ G+ L+Q++Y S+LL K M+ KP STP + +
Sbjct: 1018 DLNKEFALKDLGDLNYFLGIEVNKVRDGIILTQDKYASDLLKKVGMSDCKPISTPLSTSE 1077
Query: 1121 GV---DSSPLFD-DPALYRSVVGALQYATITRPDIYFAVNSLSTY 1243
+ + SPL + D YRS+VGALQY T+TRPDI F+VN + +
Sbjct: 1078 KLSIHEGSPLGEKDITQYRSIVGALQYLTLTRPDIAFSVNKVCQF 1122
Score = 189 bits (480), Expect(3) = e-137
Identities = 90/158 (56%), Positives = 112/158 (70%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ + +PT HW AVKRILRY++ L S S V AFSDADWAG DR+STGG
Sbjct: 1120 CQFLHAPTTLHWAAVKRILRYIKQCTNLGLHIHRSDSTLVSAFSDADWAGSVDDRKSTGG 1179
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+FLG NL+SW +RKQ TVSRSSTE+EY+ALA+AT E++W+Q LLTE+ S R+ LW
Sbjct: 1180 FAVFLGSNLVSWSARKQPTVSRSSTESEYKALANATAELIWVQILLTEISIKSPRAAKLW 1239
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKAL 1706
CDN+ A L+ANPIFH R KHI + +H+ R+ V K L
Sbjct: 1240 CDNLGAKYLSANPIFHARTKHIEVDYHFVRDRVAKKLL 1277
Score = 23.1 bits (48), Expect(3) = e-137
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLRLKLSVS 1807
+ + + T DQ+ D FTK LS ++ L+++
Sbjct: 1277 LDIEYVPTGDQVADGFTKPLSVRLLENFKVNLNLT 1311
>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 900
Score = 321 bits (823), Expect(3) = e-137
Identities = 169/347 (48%), Positives = 227/347 (65%), Gaps = 8/347 (2%)
Frame = +2
Query: 227 RGKQGIFKPKVYAS-EVQNVCEDIT-VPTCYTEACKDPRWRAVMDEEITSLLQNGTWHLV 400
R + G+ +PK Y V+ C T P+ EA W+ MD+E ++LL N TWHLV
Sbjct: 357 RSQHGVHRPKKYTDGTVRYGCLTETGEPSSLQEALSSANWKQAMDKEFSALLHNKTWHLV 416
Query: 401 QVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQDIFSPVVKPTTIKM 580
G N+I K ++KIK+KA GTI+R+KAR+VAKG+ Q G+DY+D FSPVVK TI++
Sbjct: 417 PPVKGKNIIDSKWVYKIKKKADGTIDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRL 476
Query: 581 IISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNHVCKLKKSLYGLKQA 760
++SI++ + W +RQLDV+NAFLHG L EEV+M QP G+ D P+ +CKL K+LYGLKQA
Sbjct: 477 VLSIAMSQGWSLRQLDVQNAFLHGYLDEEVYMRQPPGFEDARQPHFLCKLDKALYGLKQA 536
Query: 761 PRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLVTGISTLTIDNLLT 940
PRAW++RLS L GF +SK DTSLFF ++VL+YVD +V S+ ++ LL
Sbjct: 537 PRAWYSRLSKKLQELGFSSSKADTSLFFYNKGHHKMFVLVYVDDIIVASSSSPAVNALLK 596
Query: 941 ALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNMTFSKPYSTPFAAT- 1117
L K+FA+KDLG+LH FLGI+ R L LSQE+Y + LL + NMT KP STP +
Sbjct: 597 DLEKDFALKDLGDLHYFLGIEVKRTPQTLLLSQERYTTELLERVNMTSCKPVSTPLSTAE 656
Query: 1118 -----TGVDSSPLFDDPALYRSVVGALQYATITRPDIYFAVNSLSTY 1243
G + P D YRS+VGALQY T+TRPDI ++VN + +
Sbjct: 657 KLSVEIGDELGP--SDVTQYRSIVGALQYLTLTRPDISYSVNKVCQF 701
Score = 192 bits (489), Expect(3) = e-137
Identities = 97/167 (58%), Positives = 117/167 (70%), Gaps = 9/167 (5%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDS-------- 1388
CQ +Q+PT AHW+AVKRILRYL+GTL L+ SSS V AFSDADWAG
Sbjct: 699 CQFLQTPTTAHWSAVKRILRYLKGTLDLGLKIVKSSSNLVSAFSDADWAGSVDDRRSTGG 758
Query: 1389 -TDRRSTGGMAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQF 1565
DRRSTGG A+F G NLISW +RKQ TVSRSSTEAEY+ALA+A E++W++ LLTEL
Sbjct: 759 FADRRSTGGFAVFFGDNLISWSARKQATVSRSSTEAEYKALANAAAEIIWVRKLLTELGI 818
Query: 1566 PSSRSPVLWCDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKAL 1706
+ LWCDN+ AT +TANP+FH R KHI + +H+ RE V K L
Sbjct: 819 LHPNAARLWCDNLGATYMTANPVFHARTKHIEVDYHFVREQVAQKLL 865
Score = 25.8 bits (55), Expect(3) = e-137
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLRLKLSV 1804
+ + +S+QDQ+ D FTK +S + R L++
Sbjct: 865 LDIHFVSSQDQVADGFTKPISLQQLIGFRHNLNL 898
>ref|NP_001175678.1| Os08g0544300 [Oryza sativa Japonica Group]
gi|255678617|dbj|BAH94406.1| Os08g0544300 [Oryza sativa
Japonica Group]
Length = 821
Score = 317 bits (812), Expect(3) = e-137
Identities = 168/345 (48%), Positives = 225/345 (65%), Gaps = 6/345 (1%)
Frame = +2
Query: 227 RGKQGIFKPKVYASEVQNVCEDITV--PTCYTEACKDPRWRAVMDEEITSLLQNGTWHLV 400
R + GI K KVY + P EA + W+ MD E +L++N TWHLV
Sbjct: 280 RLQSGIRKEKVYTDGTVKWLNFTSSGEPQSLEEAVNNKHWKEAMDAEYMALIENKTWHLV 339
Query: 401 QVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQDIFSPVVKPTTIKM 580
G NVI K ++K+KRKA G+++R+KAR+VAKG+ Q G+DY+D FSPVVK TI++
Sbjct: 340 PPQKGRNVIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRI 399
Query: 581 IISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNHVCKLKKSLYGLKQA 760
++S+++ + W +RQLDVKNAFLHG L+EEV+M QP GY K +PN+VCKL K+LYGLKQA
Sbjct: 400 VLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYMEQPPGYEKKSMPNYVCKLDKALYGLKQA 459
Query: 761 PRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLVTGISTLTIDNLLT 940
PRAW++RLS+ L GF SK DTSLFF ++++LIYVD ++ LL
Sbjct: 460 PRAWYSRLSTKLSELGFVPSKADTSLFFYKKGQVSIFLLIYVDDIIMASSVPDATSTLLQ 519
Query: 941 ALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNMTFSKPYSTPFAAT- 1117
LSK+FA+KDLG+LH FLGI+ + GL LSQE+Y S+LL + M KP STP + +
Sbjct: 520 ELSKDFALKDLGDLHYFLGIEVHKVKDGLMLSQEKYASDLLRRVGMYECKPVSTPLSTSE 579
Query: 1118 -TGVDSSPLF--DDPALYRSVVGALQYATITRPDIYFAVNSLSTY 1243
V+ L D YRSVVGALQY T+TRPDI F++N + +
Sbjct: 580 KLSVNEGTLLGPQDSTQYRSVVGALQYLTLTRPDISFSINKVCQF 624
Score = 197 bits (502), Expect(3) = e-137
Identities = 96/158 (60%), Positives = 117/158 (74%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ + +PT HW AVKRILRY++ T+ L+F + SL V FSDADWAG DRRSTGG
Sbjct: 622 CQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGG 681
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+FLGPNL+SW +RKQ TVSRSSTEAEY+ALA+AT E++W+Q+LL EL S R+ LW
Sbjct: 682 FAVFLGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWVQTLLQELGVESPRAAKLW 741
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKAL 1706
CDN+ A L+ANPIFH R KHI + FH+ RE V K L
Sbjct: 742 CDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLL 779
Score = 23.9 bits (50), Expect(3) = e-137
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGL 1762
+++ IST+DQ+ D FTK +
Sbjct: 779 LEIAYISTKDQVADGFTKAI 798
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 317 bits (813), Expect(3) = e-136
Identities = 163/348 (46%), Positives = 228/348 (65%), Gaps = 2/348 (0%)
Frame = +2
Query: 191 PPSVSNNHSMTIRGKQGIFKPKVYASEVQNVCEDITVPTCYTEACKDPRWRAVMDEEITS 370
PP N H M R K GI K + + + + T P Y++A K+ W M+ E +
Sbjct: 828 PPLPLNTHPMVTRAKSGIHKKRSF------IVQHTTEPRTYSQASKNDSWVQAMNSEYQA 881
Query: 371 LLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQDIFS 550
LL+N TW LV S +++G + I+K+K + G+I+R KAR+VA+G+ Q G+DY D FS
Sbjct: 882 LLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFS 941
Query: 551 PVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNHVCKL 730
PVVKP TI++I+++++ +W +RQLDV+NAFL+G+L+EEVFM QP G+ + P +VCKL
Sbjct: 942 PVVKPCTIRLILALAVSFQWSVRQLDVENAFLNGDLEEEVFMTQPQGFVNPTYPTYVCKL 1001
Query: 731 KKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLVTGI 910
K+LYGLKQAPRAWF +L LL GFQ+S+ DTSLF A+ L +L+YVD LVTG
Sbjct: 1002 HKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGS 1061
Query: 911 STLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNMTFSK 1090
+ + + + ++ L +FA++DLG L FLGIQA + + LHL+Q +YI++LL++T M SK
Sbjct: 1062 NPMLVSHFISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSK 1121
Query: 1091 PYSTP--FAATTGVDSSPLFDDPALYRSVVGALQYATITRPDIYFAVN 1228
P TP T DP+ YR VGALQY T+TRPDI FAVN
Sbjct: 1122 PAPTPGRLGRTLSQSDGMSLSDPSEYRRTVGALQYVTLTRPDIAFAVN 1169
Score = 186 bits (472), Expect(3) = e-136
Identities = 89/160 (55%), Positives = 114/160 (71%)
Frame = +3
Query: 1230 ACQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTG 1409
ACQ M P++ HW AVKRILRYL+GT+ L F+ ++S+++Q +SDADWA DRRST
Sbjct: 1171 ACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMELQGYSDADWASCPDDRRSTS 1230
Query: 1410 GMAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVL 1589
G +FLG NLISW S KQ+ VS+SS E+EYR L T E+VWIQSLL EL P+S P+L
Sbjct: 1231 GYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPTS-PPIL 1289
Query: 1590 WCDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKALR 1709
WCDN A L ANP+FH+R KHI + H+ RE V+ + L+
Sbjct: 1290 WCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQ 1329
Score = 32.7 bits (73), Expect(3) = e-136
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLRLKLSVS 1807
+++ + + DQL DIFTK L ++F LR KL+V+
Sbjct: 1328 LQICYVPSGDQLADIFTKHLPITQFCNLRSKLTVT 1362
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 325 bits (833), Expect(2) = e-136
Identities = 169/360 (46%), Positives = 231/360 (64%), Gaps = 5/360 (1%)
Frame = +2
Query: 179 TSTAPPSVSNNHSMTIRGKQGIFKPKVYASEVQNVCEDITVPTCYTEACKDPRWRAVMDE 358
T T N H M R K GI KPK++ + ++ P+ + A + W+ M
Sbjct: 903 TRTIAKDADNTHPMITRAKSGIVKPKIFIAAIRE-------PSSVSAALQQDEWKKAMVA 955
Query: 359 EITSLLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQ 538
E +L +N TW LV + +G IG K ++K K GT++++KAR+VAKG++Q G D+
Sbjct: 956 EYDALQRNNTWSLVPLPAGRQAIGCKWVYKTKENPDGTVQKYKARLVAKGFHQQAGFDFT 1015
Query: 539 DIFSPVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNH 718
+ FSPVVKP+T++++ +I+L + W I+QLDV NAFL+G+LQEEVFM QP G+ D+ PN
Sbjct: 1016 ETFSPVVKPSTVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFIDEQNPNL 1075
Query: 719 VCKLKKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNL 898
VC+L K+LYGLKQAPRAWF +L LL GF ++K+D SLF RF + YVL+YVD L
Sbjct: 1076 VCRLHKALYGLKQAPRAWFEKLHRALLSFGFVSAKSDQSLFLRFTPNHITYVLVYVDDIL 1135
Query: 899 VTGISTLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNM 1078
V G T I +L+ L+ EF++KDLGE+H FLGIQ S + GLHLSQ +YI +LL KT M
Sbjct: 1136 VIGSDTAAITSLIAQLNSEFSLKDLGEVHYFLGIQVSHTNNGLHLSQTKYIRDLLQKTKM 1195
Query: 1079 TFSKPYSTPFAATTGV-----DSSPLFDDPALYRSVVGALQYATITRPDIYFAVNSLSTY 1243
KP TP TG+ D P+ +D YRS VGALQY TITRP++ F+VN + +
Sbjct: 1196 VHCKPARTPL--PTGLKLRVGDGDPV-EDLHGYRSTVGALQYVTITRPELSFSVNKVCQF 1252
Score = 188 bits (478), Expect(2) = e-136
Identities = 90/164 (54%), Positives = 112/164 (68%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ MQ+PTE HW VKRILRYLQGTL L K SS+L + F DADWA D DRRST G
Sbjct: 1250 CQFMQNPTEEHWKVVKRILRYLQGTLQHGLHLKKSSNLDLIGFCDADWASDLDDRRSTSG 1309
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
+FLGPNLISW S+KQ VSRSS E EYR+LA E+ W++SLL+ELQ P ++ P++W
Sbjct: 1310 HCVFLGPNLISWQSKKQHIVSRSSIEIEYRSLAGLVAEITWLRSLLSELQLPLAKPPLVW 1369
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKALRYGSFP 1724
CDN+ L+ANP+ H R KHI + ++ RE V+ K + P
Sbjct: 1370 CDNLSTVLLSANPVLHARTKHIELDLYFVREKVIRKEVEVRHVP 1413
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 316 bits (810), Expect(3) = e-136
Identities = 161/313 (51%), Positives = 215/313 (68%), Gaps = 4/313 (1%)
Frame = +2
Query: 317 EACKDPRWRAVMDEEITSLLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARI 496
EA + W+ MD E +L++N TWHLV G NVI K ++K+KRKA G+++R+KAR+
Sbjct: 890 EAVNNKHWKEAMDAEYMALIENKTWHLVPPQKGRNVIDCKWVYKVKRKADGSLDRYKARL 949
Query: 497 VAKGYNQI*GLDYQDIFSPVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFM 676
VAKG+ Q G+DY+D FSPVVK TI++++S+++ + W +RQLDVKNAFLHG L+EEV+M
Sbjct: 950 VAKGFKQRYGIDYEDTFSPVVKAATIRIVLSLAVSRGWSLRQLDVKNAFLHGVLEEEVYM 1009
Query: 677 MQPSGYADKLLPNHVCKLKKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNA 856
QP GY K +PN+VCKL K+LYGLKQAPRAW++RLS+ L GF SK DTSLFF
Sbjct: 1010 KQPPGYEKKSMPNYVCKLDKALYGLKQAPRAWYSRLSTKLSELGFVPSKADTSLFFYKKG 1069
Query: 857 SSALYVLIYVDGNLVTGISTLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLS 1036
++++LIYVD +V LL LSK+FA+KDLG+LH FLGI+ + GL LS
Sbjct: 1070 QVSIFLLIYVDDIIVASSVPDATSTLLQELSKDFALKDLGDLHYFLGIEVHKVKDGLMLS 1129
Query: 1037 QEQYISNLLHKTNMTFSKPYSTPFAAT--TGVDSSPLF--DDPALYRSVVGALQYATITR 1204
QE+Y S+LL + M KP STP + + V+ L D YRSVVGALQY T+TR
Sbjct: 1130 QEKYASDLLRRVGMYECKPVSTPLSTSEKLSVNEGTLLGPQDSTQYRSVVGALQYLTLTR 1189
Query: 1205 PDIYFAVNSLSTY 1243
PDI F++N + +
Sbjct: 1190 PDISFSINKVCQF 1202
Score = 195 bits (496), Expect(3) = e-136
Identities = 95/158 (60%), Positives = 116/158 (73%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ + +PT HW AVKRILRY++ T+ L+F + SL V FSDADWAG DRRSTGG
Sbjct: 1200 CQFLHAPTTTHWAAVKRILRYVKYTVDTGLKFCRNPSLLVSGFSDADWAGSPDDRRSTGG 1259
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+FLGPNL+SW +RKQ TVSRSS EAEY+ALA+AT E++W+Q+LL EL S R+ LW
Sbjct: 1260 FAVFLGPNLVSWSARKQATVSRSSIEAEYKALANATAEIMWVQTLLQELGVESPRAAKLW 1319
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKAL 1706
CDN+ A L+ANPIFH R KHI + FH+ RE V K L
Sbjct: 1320 CDNLGAKYLSANPIFHARTKHIEVDFHFVRERVARKLL 1357
Score = 23.9 bits (50), Expect(3) = e-136
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGL 1762
+++ IST+DQ+ D FTK +
Sbjct: 1357 LEIAYISTKDQVADGFTKAI 1376
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 328 bits (842), Expect(3) = e-135
Identities = 177/361 (49%), Positives = 242/361 (67%), Gaps = 6/361 (1%)
Frame = +2
Query: 179 TSTAPPSVSNNHSMTIRGKQGIFKPKVYAS-EVQNVCEDIT-VPTCYTEACKDPRWRAVM 352
T T +V+ R + GI K KVY V+ C T P EA D WR M
Sbjct: 894 TGTVLATVAPASRPHTRLRSGIRKEKVYTDGTVKYGCFSSTGEPQNDKEALGDKNWRDAM 953
Query: 353 DEEITSLLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLD 532
+ E +L++N TWHLV G N+IG K ++KIKRKA GT++R+KAR+VAKG+ Q G+D
Sbjct: 954 ETEYNALIKNDTWHLVPYEKGQNIIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGID 1013
Query: 533 YQDIFSPVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLP 712
Y+D FSPVVK TI++I+SI++ + W +RQLDV+NAFLHG L+EEV+M QP G+ P
Sbjct: 1014 YEDTFSPVVKAATIRIILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESSSKP 1073
Query: 713 NHVCKLKKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDG 892
++VCKL K+LYGLKQAPRAW++RLS L+ GF+ASK DTSLFF ++VL+YVD
Sbjct: 1074 DYVCKLDKALYGLKQAPRAWYSRLSKKLVELGFEASKADTSLFFLNKGGILMFVLVYVDD 1133
Query: 893 NLVTGISTLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKT 1072
+V + LL L+KEFA+KDLG+LH FLGI+ ++ S G+ L+QE+Y ++LL +
Sbjct: 1134 IIVASSTEKATTALLKDLNKEFALKDLGDLHYFLGIEVTKVSNGVILTQEKYANDLLKRV 1193
Query: 1073 NMTFSKPYSTPFAAT---TGVDSSPLFDDPAL-YRSVVGALQYATITRPDIYFAVNSLST 1240
NM+ KP STP + + T + SPL + A+ YRS+VGALQY T+TRPDI ++VN +
Sbjct: 1194 NMSNCKPVSTPLSVSEKLTLYEGSPLGPNDAIQYRSIVGALQYLTLTRPDIAYSVNKVCQ 1253
Query: 1241 Y 1243
+
Sbjct: 1254 F 1254
Score = 184 bits (466), Expect(3) = e-135
Identities = 87/164 (53%), Positives = 112/164 (68%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ + +PT +HW AVKRILRYL L S+S V +SDADWAG DR+STGG
Sbjct: 1252 CQFLHAPTTSHWIAVKRILRYLNQCTSLGLHIHKSASTLVHGYSDADWAGSIDDRKSTGG 1311
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+FLG NL+SW +RKQ TVSRSSTEAEY+A+A+ T E++W+Q+LL EL S ++ +W
Sbjct: 1312 FAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIW 1371
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKALRYGSFP 1724
CDN+ A L+ANP+FH R KHI + +H+ RE V K L P
Sbjct: 1372 CDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVP 1415
Score = 22.3 bits (46), Expect(3) = e-135
Identities = 9/35 (25%), Positives = 20/35 (57%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLRLKLSVS 1807
+++ + + DQ+ D FTK LS+ + L+++
Sbjct: 1409 LEIDFVPSGDQVADGFTKALSACLLENFKHNLNLA 1443
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 327 bits (839), Expect(2) = e-135
Identities = 174/345 (50%), Positives = 236/345 (68%), Gaps = 6/345 (1%)
Frame = +2
Query: 227 RGKQGIFKPKVYAS-EVQNVCEDIT-VPTCYTEACKDPRWRAVMDEEITSLLQNGTWHLV 400
R + GI K KVY V+ C T P EA D W+A M+ E +L++N TWHLV
Sbjct: 901 RLRSGIRKEKVYTDGTVKYGCFTSTGEPQNDKEALGDKNWKAAMEAEYDALIKNDTWHLV 960
Query: 401 QVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQDIFSPVVKPTTIKM 580
G NVIG K ++KIKRKA GT++R+KAR+VAKG+ Q G+DY+D FSPVVK TI++
Sbjct: 961 PYEKGQNVIGCKWVYKIKRKADGTLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAATIRI 1020
Query: 581 IISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNHVCKLKKSLYGLKQA 760
I+SI++ + W +RQLDV+NAFLHG L+EEV+M QP G+ PN+VCKL K+LYGLKQA
Sbjct: 1021 ILSIAVSRGWSLRQLDVQNAFLHGFLEEEVYMQQPPGFESFSKPNYVCKLDKALYGLKQA 1080
Query: 761 PRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLVTGISTLTIDNLLT 940
PRAW++RLS L+ GF+ASK DTSLFF ++VL+YVD ++ + LL
Sbjct: 1081 PRAWYSRLSKKLVELGFEASKADTSLFFLNKGGIIMFVLVYVDDIIIASSTEKATTALLK 1140
Query: 941 ALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNMTFSKPYSTPFAAT- 1117
L+KEFA+KDLG+LH FLGI+ ++ G+ L+QE+Y ++LL + NM+ KP STP + +
Sbjct: 1141 DLNKEFALKDLGDLHYFLGIEVTKVPNGIVLTQEKYANDLLKRVNMSNCKPVSTPLSVSE 1200
Query: 1118 --TGVDSSPLF-DDPALYRSVVGALQYATITRPDIYFAVNSLSTY 1243
T + SPL +D YRS+VGALQY T+TRPDI ++VN + +
Sbjct: 1201 KLTLYEGSPLGPNDATQYRSIVGALQYLTLTRPDIAYSVNKVCQF 1245
Score = 185 bits (469), Expect(2) = e-135
Identities = 88/164 (53%), Positives = 112/164 (68%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ + +PT HWTAVKRILRYL L S+S V +SDADWAG DR+STGG
Sbjct: 1243 CQFLHAPTTDHWTAVKRILRYLNQCTSLGLNIHKSASTLVHGYSDADWAGSVDDRKSTGG 1302
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+FLG NL+SW +RKQ TVSRSSTEAEY+A+A+ T E++W+Q+LL EL S ++ +W
Sbjct: 1303 FAVFLGSNLVSWSARKQPTVSRSSTEAEYKAVANTTAELIWVQTLLRELGIDSPKAAKIW 1362
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKALRYGSFP 1724
CDN+ A L+ANP+FH R KHI + +H+ RE V K L P
Sbjct: 1363 CDNLGAKYLSANPVFHARTKHIEVDYHFVRERVSQKLLEIDFVP 1406
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 317 bits (812), Expect(2) = e-135
Identities = 171/351 (48%), Positives = 231/351 (65%), Gaps = 10/351 (2%)
Frame = +2
Query: 221 TIRGKQGIFKPKVYAS---EVQNVCEDIT-VPTCYTEACKDPRWRAVMDEEITSLLQNGT 388
T R ++GI K KVY + +N +T P T+A ++ W+ MD E +L+ N T
Sbjct: 908 TTRLQRGIRKEKVYTDGTVKYKNTFLTVTGEPKNLTDALQNTNWKKAMDIEYEALMNNKT 967
Query: 389 WHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQDIFSPVVKPT 568
WHLV G NVI K ++KIKRK G+++R+KAR+VAKG+ Q G+DY+D FSPVVK
Sbjct: 968 WHLVPPKQGRNVIDCKWVYKIKRKQDGSLDRYKARLVAKGFKQRYGIDYEDTFSPVVKAA 1027
Query: 569 TIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNHVCKLKKSLYG 748
TI++++SI++ + W +RQLDV+NAFLHG L+EEV+M QP GY D+ P +VCKL K+LYG
Sbjct: 1028 TIRIVLSIAVSRGWCMRQLDVQNAFLHGFLEEEVYMKQPPGYEDESFPGYVCKLDKALYG 1087
Query: 749 LKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLVTGISTLTID 928
LKQAPRAW++RLS L GFQ SK DTSLFF ++VLIYVD +VT +
Sbjct: 1088 LKQAPRAWYSRLSKKLYDLGFQGSKGDTSLFFYNKGGLIIFVLIYVDDIIVTSSRQEAVS 1147
Query: 929 NLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNMTFSKPYSTPF 1108
LL L KEFA+KDLG+LH FLGI+ ++ + + L+Q++Y +LL + NM KP STP
Sbjct: 1148 ALLQDLKKEFALKDLGDLHYFLGIEVNKVTDEIILTQDKYACDLLRRVNMFDCKPVSTPL 1207
Query: 1109 AATTGVDS------SPLFDDPALYRSVVGALQYATITRPDIYFAVNSLSTY 1243
+ + + + PL D YRSVVGALQY T+TRPDI F VN + +
Sbjct: 1208 STSEKLSAHEGDLLGPL--DATNYRSVVGALQYLTLTRPDIAFPVNKVCQF 1256
Score = 194 bits (492), Expect(2) = e-135
Identities = 93/164 (56%), Positives = 116/164 (70%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ + +PT HW AVKRILRYL+ L+ S S+ V A+SDADWAG DRRSTGG
Sbjct: 1254 CQFLHAPTTVHWAAVKRILRYLKQCTKLGLKLCKSKSMLVSAYSDADWAGSLDDRRSTGG 1313
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+FLG NL+SWC+RKQ TVSRSSTE+EY+ALA+AT E++W+Q+LLTELQ S LW
Sbjct: 1314 FAVFLGDNLVSWCARKQATVSRSSTESEYKALANATAEIMWVQTLLTELQVQSPPMAKLW 1373
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKALRYGSFP 1724
CDN+ A L++NP+FH R KHI + +H+ RE V K L P
Sbjct: 1374 CDNLGAKYLSSNPVFHARTKHIEVDYHFVRERVSQKLLEIDFVP 1417
>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
Length = 773
Score = 314 bits (805), Expect(3) = e-135
Identities = 162/348 (46%), Positives = 226/348 (64%), Gaps = 2/348 (0%)
Frame = +2
Query: 191 PPSVSNNHSMTIRGKQGIFKPKVYASEVQNVCEDITVPTCYTEACKDPRWRAVMDEEITS 370
PP N H M R K GI K + + + + T P Y++A K+ W M+ E +
Sbjct: 175 PPLPLNTHPMVTRAKSGIHKKRSF------IVQHTTEPRTYSQAFKNDSWVQAMNSEYQA 228
Query: 371 LLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQDIFS 550
LL+N TW LV S +++G + I+K+K + G+I+R KAR+VA+G+ Q G+DY D FS
Sbjct: 229 LLRNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFDTFS 288
Query: 551 PVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNHVCKL 730
PVVKP TI++I+++++ +W +RQLDV+N FL+G+L+EEVFM QP G+ + P +VCKL
Sbjct: 289 PVVKPCTIRLILALAVSFQWSVRQLDVENGFLNGDLEEEVFMTQPQGFVNPTYPTYVCKL 348
Query: 731 KKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLVTGI 910
K+LYGLKQAPRAWF +L LL GFQ+S+ DTSLF A+ L +L+YVD LVTG
Sbjct: 349 HKALYGLKQAPRAWFQKLRIALLDYGFQSSRADTSLFIFHTATDILILLVYVDDILVTGS 408
Query: 911 STLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNMTFSK 1090
+ + + ++ L +FA++DLG L FLGIQA + + LHL+Q +YI++LL++T M SK
Sbjct: 409 NPTLVSHFISYLRTKFALRDLGPLSYFLGIQAQQLGSVLHLNQHKYIADLLNRTQMETSK 468
Query: 1091 PYSTP--FAATTGVDSSPLFDDPALYRSVVGALQYATITRPDIYFAVN 1228
P TP T DP+ YR VGALQY T+TRPDI FAVN
Sbjct: 469 PAPTPGRLGRTLSQSDGVSLSDPSEYRRTVGALQYVTLTRPDIAFAVN 516
Score = 185 bits (470), Expect(3) = e-135
Identities = 89/160 (55%), Positives = 113/160 (70%)
Frame = +3
Query: 1230 ACQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTG 1409
ACQ M P++ HW AVKRILRYL+GT+ L F+ ++S++ Q +SDADWA DRRST
Sbjct: 518 ACQFMAKPSDVHWMAVKRILRYLKGTIHLGLHFQPAASMEXQGYSDADWASCPDDRRSTS 577
Query: 1410 GMAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVL 1589
G +FLG NLISW S KQ+ VS+SS E+EYR L T E+VWIQSLL EL P+S P+L
Sbjct: 578 GYCVFLGSNLISWSSSKQRLVSKSSAESEYRGLVSLTAELVWIQSLLQELCLPTS-PPIL 636
Query: 1590 WCDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKALR 1709
WCDN A L ANP+FH+R KHI + H+ RE V+ + L+
Sbjct: 637 WCDNQSAAHLAANPVFHSRSKHIELDLHFIREKVLRQELQ 676
Score = 32.7 bits (73), Expect(3) = e-135
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLRLKLSVS 1807
+++ + + DQL DIFTK L ++F LR KL+V+
Sbjct: 675 LQICYVPSGDQLADIFTKHLPITQFCNLRSKLTVT 709
>gb|EMT21953.1| ABC transporter C family member 10 [Aegilops tauschii]
Length = 3041
Score = 311 bits (796), Expect(2) = e-134
Identities = 159/318 (50%), Positives = 216/318 (67%), Gaps = 4/318 (1%)
Frame = +2
Query: 302 PTCYTEACKDPRWRAVMDEEITSLLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIER 481
P EA D RW+ M+EE +L +N TWHLV G N+I K +++IKRK+ GTI+R
Sbjct: 2275 PGTLDEALGDTRWKKAMEEEYMTLQKNKTWHLVSPRRGKNLIDCKWVYRIKRKSDGTIDR 2334
Query: 482 FKARIVAKGYNQI*GLDYQDIFSPVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQ 661
+KAR+VAKG+ Q G+DY+D FSPVVK TI++++SI++ + W +RQLDV+NAFLHG L+
Sbjct: 2335 YKARLVAKGFKQRYGIDYEDTFSPVVKAATIRLVLSIAVSRGWSLRQLDVQNAFLHGVLK 2394
Query: 662 EEVFMMQPSGYADKLLPNHVCKLKKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLF 841
EEV+M QP G+ +K P HVCKL +LYGLKQAPRAW++ LS L GF SK+DTSLF
Sbjct: 2395 EEVYMKQPPGFENKDKPFHVCKLDNALYGLKQAPRAWYSHLSQKLQALGFVPSKSDTSLF 2454
Query: 842 FRFNASSALYVLIYVDGNLVTGISTLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSA 1021
++++VLIYVD +VT S + L LS EFA+KDLG+LH FLGI+ +
Sbjct: 2455 IYNKLKTSIFVLIYVDDIIVTSSSNEAVTGSLKDLSAEFALKDLGDLHFFLGIEVKKTED 2514
Query: 1022 GLHLSQEQYISNLLHKTNMTFSKPYSTPFAAT--TGVDSSPLF--DDPALYRSVVGALQY 1189
GLHLSQE+Y ++L+ + + K TP ++T ++ L +D YRS+VGALQY
Sbjct: 2515 GLHLSQEKYAADLVRRAGLQGCKASPTPLSSTEKLSLEEGDLLGQEDSTRYRSLVGALQY 2574
Query: 1190 ATITRPDIYFAVNSLSTY 1243
T+TRPDI FAVN + +
Sbjct: 2575 LTLTRPDISFAVNKVCQF 2592
Score = 198 bits (504), Expect(2) = e-134
Identities = 94/158 (59%), Positives = 117/158 (74%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ + +PT H TA KRI+RY++ T+ L F SSS V AFSD+DWAG DRRSTGG
Sbjct: 2590 CQFLHAPTTVHLTAAKRIVRYVKNTMSLGLTFTKSSSTLVSAFSDSDWAGCIDDRRSTGG 2649
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+F GPNLISWC +KQ TVSRSSTEAEY+ALA+AT E++W+QS+L EL +++P LW
Sbjct: 2650 FAVFFGPNLISWCVKKQATVSRSSTEAEYKALANATAEIIWVQSMLRELGVKHTKTPCLW 2709
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKAL 1706
CDN+ AT L+ANP+FH R KHI I FH+ RE V + L
Sbjct: 2710 CDNLGATYLSANPVFHARTKHIKIDFHFVRERVARRQL 2747
>emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]
Length = 1635
Score = 325 bits (833), Expect(3) = e-134
Identities = 175/349 (50%), Positives = 230/349 (65%), Gaps = 3/349 (0%)
Frame = +2
Query: 191 PPSVSNNHSMTIRGKQGIFKPKVYASEVQNVCEDITVPTCYTEACKDPRWRAVMDEEITS 370
PPS S MT R +GI K K + I+ P +A KDP W MD EI +
Sbjct: 648 PPSPSPAPRMTTRLIRGITKKKTI---LDLSAVKISEPYTLKQALKDPNWIQAMDLEIXA 704
Query: 371 LLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQDIFS 550
L +N TW LV+ S N+IG K ++K+K K G+IER+KAR+VAKGYNQ GLDY + FS
Sbjct: 705 LHRNQTWDLVEQPSEVNLIGXKWVYKLKHKPDGSIERYKARLVAKGYNQTHGLDYFETFS 764
Query: 551 PVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNHVCKL 730
PVVK TI++I++++L +W+IRQLDV NAFL+G L+E+V+M QP GY D P VC+L
Sbjct: 765 PVVKAATIRIILTVALSFQWEIRQLDVHNAFLNGELEEQVYMSQPPGYLDTTFPTKVCRL 824
Query: 731 KKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLVTGI 910
KK+LYGLKQAPRAWF RLSS L+ GF S+ D+S+F F S+ L VL+YVD ++ G
Sbjct: 825 KKALYGLKQAPRAWFQRLSSALIQWGFSNSRTDSSMFLHFGESTTLIVLVYVDDIIIXGC 884
Query: 911 STLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHKTNMTFSK 1090
S+ I +L+ L F ++DLG+L FLGI+ S + ++LSQ +Y+S+LLH+T M +K
Sbjct: 885 SSTQISSLIXKLDSIFTLRDLGQLSYFLGIEVSYHEGSMNLSQTKYVSDLLHRTEMFDTK 944
Query: 1091 PYSTPFAATTGV---DSSPLFDDPALYRSVVGALQYATITRPDIYFAVN 1228
P TP + D P+ D+ YRSVVGALQY TITRPDI FAVN
Sbjct: 945 PAKTPGVVGKNLSKFDGDPM-DEVTQYRSVVGALQYLTITRPDIAFAVN 992
Score = 171 bits (433), Expect(3) = e-134
Identities = 81/155 (52%), Positives = 106/155 (68%)
Frame = +3
Query: 1230 ACQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTG 1409
ACQ MQ PT AHW ++KRILRYL+GT+ L S++L ++ FSDA+W DRRS+
Sbjct: 994 ACQFMQQPTSAHWLSIKRILRYLKGTMQDGLLLSPSTNLTIEXFSDANWGAQPDDRRSSS 1053
Query: 1410 GMAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVL 1589
G ++LG NL+SW S KQK VSRSS E+EYR LA AT E++W+Q+LL EL P P+L
Sbjct: 1054 GYLVYLGGNLVSWSSTKQKVVSRSSAESEYRGLALATAEIIWMQALLQELCVPIPAIPLL 1113
Query: 1590 WCDNMCATSLTANPIFHNRMKHI*IAFHYARE*VV 1694
W DN+ A + NP+FH R KHI I H+ R+ V+
Sbjct: 1114 WYDNISAYHMAKNPVFHARTKHIEIDLHFIRDQVI 1148
Score = 32.7 bits (73), Expect(3) = e-134
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLRLKLSVS 1807
I++ + T+DQ D+ TK L+SSRF +L+ L ++
Sbjct: 1152 IQLHFVPTEDQPADLLTKHLTSSRFLSLKSHLCIA 1186
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 315 bits (807), Expect(3) = e-133
Identities = 169/351 (48%), Positives = 231/351 (65%), Gaps = 7/351 (1%)
Frame = +2
Query: 212 HSMTIRGKQGIFKPKVYASEVQNVCEDITVPTCYTEACKDPRWRAVMDEEITSLLQNGTW 391
H M R K GIFKP VY ++ ++ P + EA P+W+ MDEE +L++N TW
Sbjct: 722 HHMVTRSKNGIFKPXVYTVDL-----NVEEPNTFQEAISHPKWKEAMDEEFRALMKNKTW 776
Query: 392 HLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GLDYQDIFSPVVKPTT 571
LV + + +G + +FK+KR G++ R+KAR+VAKGY+Q+ G D+ + FSPVVKPTT
Sbjct: 777 SLVSLPTNRTSVGCRWVFKLKRNPDGSVSRYKARLVAKGYSQVPGFDFYETFSPVVKPTT 836
Query: 572 IKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLLPNH--VCKLKKSLY 745
I+++++I++ + W IRQLDV NAFL+G LQEEV+M QP G+ K VCKL K+LY
Sbjct: 837 IRVVLAIAVSQSWCIRQLDVNNAFLNGELQEEVYMDQPPGFDGKTNQEQKLVCKLHKALY 896
Query: 746 GLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVDGNLVTGISTLTI 925
GLKQAPRAWF +L L GF ++K+D SLF RF S+L+VL+YVD +VTG S+ I
Sbjct: 897 GLKQAPRAWFDKLKISLQQFGFSSTKSDQSLFVRFTNCSSLFVLVYVDDIVVTGSSSQEI 956
Query: 926 DNLLTALSKEFAIKDLGELHLFLGIQASRNS-AGLHLSQEQYISNLLHKTNMTFSKPYST 1102
L++ L F++KDLGEL FLGI+ + + GLHLSQ++YI +LL KT M +K T
Sbjct: 957 HELISRLRGLFSLKDLGELSYFLGIEVKKTADGGLHLSQKKYIQDLLKKTKMDGAKSLPT 1016
Query: 1103 PFAATTGVDSSPLFDDPA----LYRSVVGALQYATITRPDIYFAVNSLSTY 1243
P +G+ S DP YRSVVGALQY TITRP+I F+VN + +
Sbjct: 1017 PM--LSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAFSVNKVCQF 1065
Score = 179 bits (455), Expect(3) = e-133
Identities = 84/164 (51%), Positives = 110/164 (67%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ MQ P + HW AVKRILRYL GT + K S ++ + F DADW D DRRST G
Sbjct: 1063 CQFMQKPLDTHWKAVKRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSG 1122
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
+FLG +L+SW S+KQ T SRSSTEAEYR+LA T E++W+QSLL+ELQ + PV+W
Sbjct: 1123 HCVFLGKSLVSWSSKKQHTTSRSSTEAEYRSLASLTSEMLWLQSLLSELQTKMTMVPVIW 1182
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKALRYGSFP 1724
CDN+ SL+ANP+ H+R KH+ + ++ RE V+ + L P
Sbjct: 1183 CDNISTVSLSANPVLHSRTKHMELDLYFVREKVMERKLVVNHVP 1226
Score = 32.0 bits (71), Expect(3) = e-133
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 1709 VRLISTQDQLVDIFTKGLSSSRFATLRLKLSVS 1807
V + T+DQ+ D+FTK LS F LR KL+V+
Sbjct: 1222 VNHVPTEDQVADVFTKPLSFRFFDKLREKLTVA 1254
>emb|CCH50966.1| T4.5 [Malus x robusta]
Length = 1670
Score = 326 bits (835), Expect(3) = e-133
Identities = 165/358 (46%), Positives = 234/358 (65%), Gaps = 7/358 (1%)
Frame = +2
Query: 191 PPSVSNNHSMTIRGKQGIFKPKVYAS---EVQNVCEDITV----PTCYTEACKDPRWRAV 349
PP N H+M R K GI KPKV+ + ++ + + +T P+ + +A K W
Sbjct: 1105 PPIPVNTHTMITRAKAGIHKPKVFTATKHQLPSTVDSLTALPPTPSTFLQASKSSHWMEA 1164
Query: 350 MDEEITSLLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*GL 529
M E +L GTW LV +S YN++G K +FK+K K GTIER+KAR+VAKG++Q GL
Sbjct: 1165 MQFEFQALQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFHQQEGL 1224
Query: 530 DYQDIFSPVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKLL 709
D+ + FSPV KPTTI++++SI++ W I QLDV NAFLHG+L+E+V+M+QP G+ D
Sbjct: 1225 DFSETFSPVAKPTTIRILLSIAVSYYWFIHQLDVSNAFLHGHLKEDVYMVQPPGFVDPSK 1284
Query: 710 PNHVCKLKKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYVD 889
P+HVCKL+KSLYGLKQAPRAW+ + +L GF +S +DTSLF + +S ++L+YVD
Sbjct: 1285 PHHVCKLRKSLYGLKQAPRAWYEAFYTAILSLGFSSSHSDTSLFIK-RDTSITFILVYVD 1343
Query: 890 GNLVTGISTLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLHK 1069
++TG S ++++ L F +KDLG+++ FLGI+ ++ GL L Q +Y +LL K
Sbjct: 1344 DIIITGSSVTECQSIISQLQTMFPVKDLGDINYFLGIEVHKSDQGLLLHQAKYALDLLKK 1403
Query: 1070 TNMTFSKPYSTPFAATTGVDSSPLFDDPALYRSVVGALQYATITRPDIYFAVNSLSTY 1243
T+M +KP +TP + + S L DP YRS VGALQY T TRPD+ FAVN + Y
Sbjct: 1404 TDMLGAKPCATPVSTSKLDHSGTLLSDPTSYRSTVGALQYLTWTRPDLAFAVNQVCQY 1461
Score = 167 bits (424), Expect(3) = e-133
Identities = 81/154 (52%), Positives = 106/154 (68%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ+M SP H AVKRILRYL+GT+ L F S + A+SDADWAG DRRST G
Sbjct: 1459 CQYMHSPQTIHLQAVKRILRYLKGTVDLGLWFTKGSQC-LTAWSDADWAGCPVDRRSTSG 1517
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
+FLG NLISW ++KQ TV+RSSTEAEYR+LA+ E+ W+ +L ++ FP ++PV++
Sbjct: 1518 YCVFLGSNLISWSAKKQATVARSSTEAEYRSLANTAAEITWVCKILHDISFPLLKTPVIY 1577
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VV 1694
CDN +L NP+FH R KH+ I +HY RE V+
Sbjct: 1578 CDNKSVIALAFNPVFHARTKHVEIDYHYIREKVL 1611
Score = 32.7 bits (73), Expect(3) = e-133
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLRLKLSV 1804
I V+ +++ Q+ DIFTK L++ RFA L KLSV
Sbjct: 1615 IGVQHVASLLQIADIFTKPLAADRFAALTSKLSV 1648
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 307 bits (786), Expect(3) = e-133
Identities = 168/363 (46%), Positives = 237/363 (65%), Gaps = 10/363 (2%)
Frame = +2
Query: 185 TAPPSVSNNHSMTIRGK----QGIFKPKVYAS-EVQNVCEDIT-VPTCYTEACKDPRWRA 346
++ PS S S IR K GI K K+Y V+ C + P EA D W+
Sbjct: 879 SSAPSESAQLSEVIRPKTRLQSGIRKEKIYTDGTVRYSCFTSSGEPQTLHEALGDKNWKE 938
Query: 347 VMDEEITSLLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*G 526
MD E +L++N TWHLV G N+I K ++K+KRKA G+++R+KAR+VAKG+ Q G
Sbjct: 939 AMDSEYQALMKNKTWHLVPSKKGQNIIDCKWVYKVKRKADGSLDRYKARVVAKGFKQRYG 998
Query: 527 LDYQDIFSPVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKL 706
+DY+D F+PVVK TI+ I+SI++ + W +RQLDV+NAFLHG L+E+VFM QP GY K
Sbjct: 999 IDYEDTFNPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEEDVFMRQPPGYEQK- 1057
Query: 707 LPNHVCKLKKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYV 886
+VCKL K+LYGLKQAPRAW++RLS+ L GF++SK+DTSLFF A+++L+YV
Sbjct: 1058 -DGYVCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDVAMFMLVYV 1116
Query: 887 DGNLVTGISTLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLH 1066
D +V S + LL L++EFA+KDLG LH FLGI+ + G+ L+QE+Y ++L
Sbjct: 1117 DDIIVASSSIDATNALLKNLNQEFALKDLGRLHYFLGIEVKEVNNGIVLTQEKYAMDVLK 1176
Query: 1067 KTNMTFSKPYSTPFAAT---TGVDSSPLF-DDPALYRSVVGALQYATITRPDIYFAVNSL 1234
+ NM+ K +TP + + + + +P +D YRS+VGALQY T+TRPD+ F+VN +
Sbjct: 1177 RVNMSDCKAVNTPLSISEKLSAHEGNPFGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKV 1236
Query: 1235 STY 1243
Y
Sbjct: 1237 CQY 1239
Score = 190 bits (482), Expect(3) = e-133
Identities = 90/159 (56%), Positives = 116/159 (72%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ++ +PT HW A KRILRYL+ T+ L+ S+SL V AFSDADWAG DR STGG
Sbjct: 1237 CQYLHAPTTKHWAAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRHSTGG 1296
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+F+GPNL+SW +RKQ TVSRSSTEAEY+ALA+ T E++WIQ+LL EL + + +W
Sbjct: 1297 FAVFIGPNLVSWSARKQATVSRSSTEAEYKALANVTAEIMWIQTLLHELGIQAPKIAKVW 1356
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKALR 1709
CDN+ A +TANP+FH R KHI + +H+ RE V K L+
Sbjct: 1357 CDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKFLQ 1395
Score = 29.3 bits (64), Expect(3) = e-133
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLRLKLSVSDS 1813
++V IST+DQ+ D FTK LS + R L+++ S
Sbjct: 1394 LQVEYISTKDQVADGFTKTLSVRQLEMFRNNLNLTGS 1430
>gb|AAK55460.1|AC069300_15 putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|31433472|gb|AAP54977.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1031
Score = 304 bits (779), Expect(3) = e-132
Identities = 166/363 (45%), Positives = 236/363 (65%), Gaps = 10/363 (2%)
Frame = +2
Query: 185 TAPPSVSNNHSMTIRGK----QGIFKPKVYAS-EVQNVCEDIT-VPTCYTEACKDPRWRA 346
++ PS S S +R K GI K K+Y V+ C + P EA D W+
Sbjct: 479 SSAPSESAQLSEVMRPKTRLQSGIRKEKIYTDGTVRYSCFTSSGEPQTLHEALGDKNWKE 538
Query: 347 VMDEEITSLLQNGTWHLVQVNSGYNVIGYK*IFKIKRKAYGTIERFKARIVAKGYNQI*G 526
MD E +L++N TWH V G N+I K ++K+KRKA G+++R+KAR+VAKG+ Q G
Sbjct: 539 AMDSEYQALMKNKTWHRVPSKKGQNIIDCKWVYKVKRKADGSLDRYKARLVAKGFKQRYG 598
Query: 527 LDYQDIFSPVVKPTTIKMIISISLHKRWQIRQLDVKNAFLHGNLQEEVFMMQPSGYADKL 706
+DY+D F PVVK TI+ I+SI++ + W +RQLDV+NAFLHG L+E+VFM QP GY K
Sbjct: 599 IDYEDTFRPVVKAATIRTILSIAISRGWTLRQLDVQNAFLHGVLEEDVFMRQPPGYEQK- 657
Query: 707 LPNHVCKLKKSLYGLKQAPRAWFARLSSFLLHNGFQASKNDTSLFFRFNASSALYVLIYV 886
+VCKL K+LYGLKQAPRAW++RLS+ L GF++SK+DTSLFF +++L+YV
Sbjct: 658 -DGYVCKLDKALYGLKQAPRAWYSRLSTKLHELGFKSSKSDTSLFFYSKGDVTIFMLVYV 716
Query: 887 DGNLVTGISTLTIDNLLTALSKEFAIKDLGELHLFLGIQASRNSAGLHLSQEQYISNLLH 1066
D +V S + + LL L++EFA+KDLG LH FLGI+ + G+ L+QE+Y ++L
Sbjct: 717 DDIIVASSSIVATNALLKNLNQEFALKDLGRLHYFLGIEVKEVNDGIVLTQEKYAMDVLK 776
Query: 1067 KTNMTFSKPYSTPFAAT---TGVDSSPLF-DDPALYRSVVGALQYATITRPDIYFAVNSL 1234
+ NM+ K +TP + + + + +PL +D YRS+VGALQY T+TRPD+ F+VN +
Sbjct: 777 RVNMSDCKAVNTPLSISEKLSAHEGNPLGPEDSTRYRSLVGALQYLTLTRPDLSFSVNKV 836
Query: 1235 STY 1243
Y
Sbjct: 837 CQY 839
Score = 189 bits (481), Expect(3) = e-132
Identities = 91/159 (57%), Positives = 116/159 (72%)
Frame = +3
Query: 1233 CQHMQSPTEAHWTAVKRILRYLQGTLGFDLQFKCSSSLQVQAFSDADWAGDSTDRRSTGG 1412
CQ++ + T HW A KRILRYL+ T+ L+ S+SL V AFSDADWAG DRRSTGG
Sbjct: 837 CQYLHAATTKHWVAAKRILRYLKHTVKLGLKISKSNSLLVSAFSDADWAGCLDDRRSTGG 896
Query: 1413 MAIFLGPNLISWCSRKQKTVSRSSTEAEYRALADATLEVVWIQSLLTELQFPSSRSPVLW 1592
A+F+GPNL+SW +RKQ TVSRSSTEAEY+ALA+AT E++WIQ+LL EL + +W
Sbjct: 897 FAVFIGPNLVSWSARKQATVSRSSTEAEYKALANATAEIMWIQTLLHELGIQVPKIAKVW 956
Query: 1593 CDNMCATSLTANPIFHNRMKHI*IAFHYARE*VVSKALR 1709
CDN+ A +TANP+FH R KHI + +H+ RE V K L+
Sbjct: 957 CDNIGAKYMTANPVFHARTKHIEVDYHFVRERVARKLLQ 995
Score = 29.3 bits (64), Expect(3) = e-132
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 1703 IKVRLISTQDQLVDIFTKGLSSSRFATLRLKLSVSDS 1813
++V IST+DQ+ D FTK LS + R L+++ S
Sbjct: 994 LQVEYISTKDQVADGFTKTLSVRQLEMFRNNLNLTGS 1030