BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00023314
         (595 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]              199   6e-49
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   199   6e-49
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]   182   8e-44
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme...   179   5e-43
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun...   174   2e-41
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme...   173   4e-41
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   173   4e-41
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   173   4e-41
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...   172   6e-41
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A...   168   9e-40
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no...   166   5e-39
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid...   166   6e-39
dbj|BAF01243.1| hypothetical protein [Arabidopsis thaliana]           166   6e-39
ref|XP_007018506.1| RNA-dependent RNA polymerase family protein,...   163   3e-38
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   162   5e-38
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu...   162   7e-38
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   162   7e-38
ref|XP_002883965.1| RNA-dependent RNA polymerase family protein ...   161   1e-37
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps...   160   2e-37
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...   160   3e-37

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  199 bits (505), Expect = 6e-49
 Identities = 99/197 (50%), Positives = 132/197 (67%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
            QLL+ F+ S PW +K + + V  ++PTDFSP ELE ELFQ FLTTRF  S ++G+AAD W
Sbjct: 646  QLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNW 705

Query: 183  LAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYL 362
            L +MDRLLTL DDC+          L+LTDIYYDALDAPK+G KV V   L+  ++PH++
Sbjct: 706  LVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFM 765

Query: 363  EKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQ 542
             + +  SY S SILG I+D V SF+  +     E  +LP F+ + +P +C+R W++RYDQ
Sbjct: 766  GRES--SYHSTSILGQIYDAVESFQ-PENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQ 822

Query: 543  YRSEMTDALNQDDDVKD 593
            YRSEM  AL    + KD
Sbjct: 823  YRSEMAAALQHGGETKD 839


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  199 bits (505), Expect = 6e-49
 Identities = 99/197 (50%), Positives = 132/197 (67%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
            QLL+ F+ S PW +K + + V  ++PTDFSP ELE ELFQ FLTTRF  S ++G+AAD W
Sbjct: 660  QLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNW 719

Query: 183  LAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYL 362
            L +MDRLLTL DDC+          L+LTDIYYDALDAPK+G KV V   L+  ++PH++
Sbjct: 720  LVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFM 779

Query: 363  EKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQ 542
             + +  SY S SILG I+D V SF+  +     E  +LP F+ + +P +C+R W++RYDQ
Sbjct: 780  GRES--SYHSTSILGQIYDAVESFQ-PENQSTKEIWRLPLFNIDAVPQACLRSWKDRYDQ 836

Query: 543  YRSEMTDALNQDDDVKD 593
            YRSEM  AL    + KD
Sbjct: 837  YRSEMAAALQHGGETKD 853


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score =  182 bits (461), Expect = 8e-44
 Identities = 93/189 (49%), Positives = 123/189 (65%)
 Frame = +3

Query: 27   SSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCWLAYMDRLL 206
            S PW +K + + V  ++PTDFSP ELE ELFQ FLTTRF  S ++G+AAD WL +MDRLL
Sbjct: 937  SEPWMRKXSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLL 996

Query: 207  TLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYLEKSNLGSY 386
            TL DDC+          L+LTDIYYDALDAPK+G KV V   L+  ++PH++ + +  SY
Sbjct: 997  TLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEKFPHFMGRES--SY 1054

Query: 387  QSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQYRSEMTDA 566
             S SILG I+D V SF+       N++ K      + +P +C+R W++RYDQYRSEM  A
Sbjct: 1055 HSTSILGQIYDAVESFQ-----PENQSTK------DAVPQACLRSWKDRYDQYRSEMAAA 1103

Query: 567  LNQDDDVKD 593
            L    + KD
Sbjct: 1104 LQHGGETKD 1112


>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
            vesca subsp. vesca]
          Length = 1405

 Score =  179 bits (454), Expect = 5e-43
 Identities = 97/194 (50%), Positives = 120/194 (61%), Gaps = 1/194 (0%)
 Frame = +3

Query: 3    QLLESFKPSSPW-EQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADC 179
            QLLE +KPS PW E   + K    R P+D SP +LED LF+ FLTTRF PS++M  AAD 
Sbjct: 1121 QLLEWYKPSEPWIEASISTKKNPSRCPSDHSPEDLEDVLFRSFLTTRFEPSFAMSEAADN 1180

Query: 180  WLAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHY 359
            WLA+MD  LTL D             LQL D+YY ALDA K G KV+VP  L+VS +PHY
Sbjct: 1181 WLAWMDHFLTLGDSNIHEKNNVKEKILQLVDLYYTALDAAKKGVKVDVPKELKVSCFPHY 1240

Query: 360  LEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYD 539
            + K+   SY S SILG I+++V   +T  R    E  KLPAFD  E+P +C+  W E + 
Sbjct: 1241 MGKNR--SYPSTSILGSIYNRVDEHQTEDR-SLKEVEKLPAFDENEVPDACLDKWAELHR 1297

Query: 540  QYRSEMTDALNQDD 581
            QYR EM  AL+ DD
Sbjct: 1298 QYRKEMASALDDDD 1311


>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
            gi|462399806|gb|EMJ05474.1| hypothetical protein
            PRUPE_ppa001584mg [Prunus persica]
          Length = 798

 Score =  174 bits (440), Expect = 2e-41
 Identities = 90/194 (46%), Positives = 119/194 (61%), Gaps = 1/194 (0%)
 Frame = +3

Query: 3    QLLESFKPSSPW-EQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADC 179
            QLLE FKPS PW E   +   V   +P++  P  +ED L + FL TRF PS++M  A+D 
Sbjct: 514  QLLECFKPSEPWIEASSSTPKVASTRPSELLPNHIEDALIKLFLKTRFEPSFAMSEASDS 573

Query: 180  WLAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHY 359
            WLA MDRLL L D             L+L D+YY+ALDAPK G KV VP  L+ + +PHY
Sbjct: 574  WLAMMDRLLILGDSSNSEKTHVKANMLRLVDLYYEALDAPKKGGKVVVPGELKSNLFPHY 633

Query: 360  LEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYD 539
            +E+ N  SY+S SILGLI+D V +++  +     E +KLP FD  E+P  C++ W E Y 
Sbjct: 634  MERVN--SYKSTSILGLIYDTVNAYQ-AEDASIKEVKKLPMFD-VEVPEECLKKWREHYQ 689

Query: 540  QYRSEMTDALNQDD 581
             YRSEM+ A+  DD
Sbjct: 690  HYRSEMSSAMQDDD 703


>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 988

 Score =  173 bits (438), Expect = 4e-41
 Identities = 93/198 (46%), Positives = 128/198 (64%), Gaps = 2/198 (1%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
            QLL+ F+   PW +         +KP++FSP ELE+ELF+ FL TRF PSY+MG++ + W
Sbjct: 703  QLLQYFRKGDPWIENSVPLDSSVKKPSEFSPEELEEELFRLFLKTRFQPSYAMGMSENSW 762

Query: 183  LAYMDRLLTLSDDCT--XXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPH 356
            +A MDRLLTL ++CT            L+L DIYY+ALDAPK+G KV+VP++L    +PH
Sbjct: 763  MALMDRLLTL-NNCTNENEKERVKENMLKLIDIYYEALDAPKSGRKVQVPNDLIAELFPH 821

Query: 357  YLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERY 536
            Y+EK    S+ S SILGLI+D+V  +     +   E  KLP FD  E+P SC+  W+ +Y
Sbjct: 822  YMEKDK--SFTSTSILGLIYDEVEIWLENDMV--GEIWKLPCFD-VEVPPSCLEKWKTKY 876

Query: 537  DQYRSEMTDALNQDDDVK 590
            ++YR +MTDALN  D  K
Sbjct: 877  EEYRKDMTDALNLKDKSK 894


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334280|gb|ERP58267.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  173 bits (438), Expect = 4e-41
 Identities = 92/198 (46%), Positives = 125/198 (63%), Gaps = 1/198 (0%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
            QLLE+FK + PW    +  +V +RKP++FS  ELE ELF+ FL  RF PS ++GVAAD W
Sbjct: 593  QLLETFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELFKLFLRNRFQPSSTVGVAADSW 652

Query: 183  LAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKT-GEKVEVPSNLRVSRYPHY 359
            LA MDRLLTL +DC             L DIYYDALDAPK  G ++EVP  L+   +PH+
Sbjct: 653  LAMMDRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKKGGRRIEVPEGLKAELFPHF 712

Query: 360  LEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYD 539
            + K+   +Y+S SILG I+DKV +++    L +N+  KLP FD +E+    +  W+E Y 
Sbjct: 713  MGKNEKKTYRSTSILGKIYDKVKAYEDMD-LSSNDVWKLPCFD-DEVHELYLVKWKELYG 770

Query: 540  QYRSEMTDALNQDDDVKD 593
            QYR EM +AL   ++  D
Sbjct: 771  QYRKEMRNALKAGEESND 788


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334279|gb|ERP58266.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  173 bits (438), Expect = 4e-41
 Identities = 92/198 (46%), Positives = 125/198 (63%), Gaps = 1/198 (0%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
            QLLE+FK + PW    +  +V +RKP++FS  ELE ELF+ FL  RF PS ++GVAAD W
Sbjct: 615  QLLETFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELFKLFLRNRFQPSSTVGVAADSW 674

Query: 183  LAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKT-GEKVEVPSNLRVSRYPHY 359
            LA MDRLLTL +DC             L DIYYDALDAPK  G ++EVP  L+   +PH+
Sbjct: 675  LAMMDRLLTLGNDCAEEIVCMKENINLLIDIYYDALDAPKKGGRRIEVPEGLKAELFPHF 734

Query: 360  LEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYD 539
            + K+   +Y+S SILG I+DKV +++    L +N+  KLP FD +E+    +  W+E Y 
Sbjct: 735  MGKNEKKTYRSTSILGKIYDKVKAYEDMD-LSSNDVWKLPCFD-DEVHELYLVKWKELYG 792

Query: 540  QYRSEMTDALNQDDDVKD 593
            QYR EM +AL   ++  D
Sbjct: 793  QYRKEMRNALKAGEESND 810


>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            lycopersicum]
          Length = 1011

 Score =  172 bits (436), Expect = 6e-41
 Identities = 90/196 (45%), Positives = 127/196 (64%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
            +L++S+  S PW + ++  +   +KP++FS  ELE ELF+QFL  + +   +M +AAD W
Sbjct: 729  KLVDSYTTSRPWIRMHSTPNAVSKKPSEFSADELEYELFRQFLEAK-SKGANMSLAADSW 787

Query: 183  LAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYL 362
            LA+MDRLLTL DD            L L DIYYDALDAPK+G+KV +P  L+ +++PHY+
Sbjct: 788  LAFMDRLLTLRDDNVDDMHSLKGKMLHLIDIYYDALDAPKSGKKVSIPHYLKANKFPHYM 847

Query: 363  EKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQ 542
            EK N  SY S SILG I+D V S+   + L   E  KLP F+  EIP  CM LW  RY++
Sbjct: 848  EKGNSCSYHSTSILGQIYDHVDSY-PDEDLCITEISKLPCFE-VEIPQRCMTLWRGRYEE 905

Query: 543  YRSEMTDALNQDDDVK 590
            Y+ +MT A+N D +++
Sbjct: 906  YKKDMTRAMNFDCELR 921


>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
            gi|548857326|gb|ERN15132.1| hypothetical protein
            AMTR_s00056p00110240 [Amborella trichopoda]
          Length = 988

 Score =  168 bits (426), Expect = 9e-40
 Identities = 91/196 (46%), Positives = 118/196 (60%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
            +LL  FK   PWE+  + K    RKP ++SP ELE ELF  FL +RF+PS +   AAD W
Sbjct: 708  ELLHYFKAGPPWERSSSEKPPPQRKPIEYSPDELETELFDLFLESRFHPSIAKCAAADSW 767

Query: 183  LAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYL 362
            L YMDRLLTL D+C           L+L D+YY+A+DAPK+G+KVEVP +L+  RYPH++
Sbjct: 768  LVYMDRLLTLGDECAEEKGCLHQKMLKLADLYYEAVDAPKSGKKVEVPKDLKPERYPHFM 827

Query: 363  EKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQ 542
            E++    Y S SILG I+D VAS      +   +   LP F  EE+  S M  W+  Y Q
Sbjct: 828  ERTY--QYTSTSILGQIYDLVAS--AQMDVPCEDIELLPCF-LEEVEPSGMEKWKGLYAQ 882

Query: 543  YRSEMTDALNQDDDVK 590
            YR EM  AL+  D  K
Sbjct: 883  YRDEMNKALSSTDQKK 898


>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
          Length = 521

 Score =  166 bits (420), Expect = 5e-39
 Identities = 92/212 (43%), Positives = 121/212 (57%), Gaps = 19/212 (8%)
 Frame = +3

Query: 3   QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
           +LL+ FKPS PW +K +   V+ ++P D S  ELEDEL + FLT RF PS++   A++ W
Sbjct: 220 ELLKYFKPSDPWIKKSSTGKVKSKQPIDLSDRELEDELIKLFLTVRFKPSFAKSEASEGW 279

Query: 183 LAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEK---------------- 314
           LA MDR LTL DDC            +L DIYYDALDAPK G K                
Sbjct: 280 LALMDRFLTLGDDCVAEKNAVKDNLFELVDIYYDALDAPKQGGKQQDLAKFFEAYAALEL 339

Query: 315 ---VEVPSNLRVSRYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAF 485
              VEVP  L+ +R+PHY+EK N  S+ SRSILG I+D+V +++        E  KLP F
Sbjct: 340 SFQVEVPRELKPNRFPHYMEKQN--SFHSRSILGWIYDEVDAYQLEDH-SNKEIFKLPHF 396

Query: 486 DGEEIPASCMRLWEERYDQYRSEMTDALNQDD 581
           +  E+P +C+  W+  Y  YR +M DAL   D
Sbjct: 397 E-VEVPEACLTKWKAHYKDYRDDMCDALLAKD 427


>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
            gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 5;
            Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
            5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
            polymerase 5 [Arabidopsis thaliana]
          Length = 977

 Score =  166 bits (419), Expect = 6e-39
 Identities = 94/198 (47%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYT-AKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADC 179
            +LLE+FKPS PW      +KS   R P+  SP ELE+ELF+ FLT  F+ S  +G+AAD 
Sbjct: 695  ELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADS 754

Query: 180  WLAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHY 359
            WL  MDR L L DD            L+L DIYYDALDAPK G+KV +P+ L+   +PHY
Sbjct: 755  WLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHY 814

Query: 360  LEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCM---RLWEE 530
            +E+     +QS SILGLIFD V S  T +   ++E  KLP F+ E +    M   RLW  
Sbjct: 815  MERDK--KFQSTSILGLIFDFVKSQTTEEPSPSSEISKLPCFEDEPVSEFHMQKCRLW-- 870

Query: 531  RYDQYRSEMTDALNQDDD 584
             YD YR+EMT A+  D D
Sbjct: 871  -YDNYRTEMTQAMKTDKD 887


>dbj|BAF01243.1| hypothetical protein [Arabidopsis thaliana]
          Length = 339

 Score =  166 bits (419), Expect = 6e-39
 Identities = 94/198 (47%), Positives = 119/198 (60%), Gaps = 4/198 (2%)
 Frame = +3

Query: 3   QLLESFKPSSPWEQKYT-AKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADC 179
           +LLE+FKPS PW      +KS   R P+  SP ELE+ELF+ FLT  F+ S  +G+AAD 
Sbjct: 57  ELLENFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADS 116

Query: 180 WLAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHY 359
           WL  MDR L L DD            L+L DIYYDALDAPK G+KV +P+ L+   +PHY
Sbjct: 117 WLTIMDRFLILGDDRAEEKAEMKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHY 176

Query: 360 LEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCM---RLWEE 530
           +E+     +QS SILGLIFD V S  T +   ++E  KLP F+ E +    M   RLW  
Sbjct: 177 MERDK--KFQSTSILGLIFDFVKSQTTEEPSPSSEISKLPCFEDEPVSEFHMQKCRLW-- 232

Query: 531 RYDQYRSEMTDALNQDDD 584
            YD YR+EMT A+  D D
Sbjct: 233 -YDNYRTEMTQAMKTDKD 249


>ref|XP_007018506.1| RNA-dependent RNA polymerase family protein, putative isoform 2,
           partial [Theobroma cacao] gi|508723834|gb|EOY15731.1|
           RNA-dependent RNA polymerase family protein, putative
           isoform 2, partial [Theobroma cacao]
          Length = 292

 Score =  163 bits (413), Expect = 3e-38
 Identities = 90/193 (46%), Positives = 115/193 (59%)
 Frame = +3

Query: 3   QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
           QLL+ FK S PW +  +   V  + P +FS  ELEDELF+ FL TRF PS +M +A+D  
Sbjct: 78  QLLDYFKVSEPWTENSSTCGVSTKGPCEFSNEELEDELFKLFLRTRFQPSNAMAIASDNC 137

Query: 183 LAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHYL 362
           +A MDRLLTL D  +           +L D+YY++LDAPKTG+K+EVP  LR   +PHYL
Sbjct: 138 MAVMDRLLTLEDSNSPEEFLLKKNLQRLIDLYYESLDAPKTGKKIEVPRELRADAFPHYL 197

Query: 363 EKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYDQ 542
           E+    S++S SILG I+D V S+   + L   E RKLP FD    P  C   W E Y Q
Sbjct: 198 ERQK--SFKSASILGKIYDFVKSY--GEELPRKEVRKLPCFD-VGFPQDCREKWTELYKQ 252

Query: 543 YRSEMTDALNQDD 581
           YR +MT  L   D
Sbjct: 253 YREDMTQTLQTLD 265


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  162 bits (411), Expect = 5e-38
 Identities = 90/195 (46%), Positives = 115/195 (58%), Gaps = 1/195 (0%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYT-AKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADC 179
            +LLE FKPS PW      +KS   R P+  SP ELE+ELF+ FL   F+ S  +G+AAD 
Sbjct: 699  ELLEHFKPSEPWVSLTPPSKSNSGRAPSQLSPEELEEELFEMFLKAGFHASNVIGIAADS 758

Query: 180  WLAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHY 359
            WL  MDRLL L D+            L+L DIYYDALDAPK G+KV +P+ LR   +PHY
Sbjct: 759  WLTIMDRLLILGDERAEEKAEMKKKMLKLIDIYYDALDAPKKGDKVYLPNELRPDIFPHY 818

Query: 360  LEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYD 539
            +E+     ++S SILGLI+D V S  T +   ++E  KLP F+ E +    M      YD
Sbjct: 819  MEREK--KFKSTSILGLIYDFVKSQTTEEPTPSSEISKLPCFEDEPVSEFHMEKCRRWYD 876

Query: 540  QYRSEMTDALNQDDD 584
             YRSEMT A+  D D
Sbjct: 877  NYRSEMTQAMKTDKD 891


>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
            gi|550336519|gb|ERP59562.1| hypothetical protein
            POPTR_0006s17780g [Populus trichocarpa]
          Length = 866

 Score =  162 bits (410), Expect = 7e-38
 Identities = 88/190 (46%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
            +LLE+FK + PW    +  +V +RKP++FS  ELE ELF+ FL  RF PS+++GVAAD W
Sbjct: 593  RLLENFKQTEPWTPSTSTPNVPNRKPSEFSDEELEVELFKLFLRNRFQPSFTVGVAADSW 652

Query: 183  LAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKT-GEKVEVPSNLRVSRYPHY 359
            LA MDRLLTL +DCT            L DIYYDALDAPK  G K+EVP  L+   +PH+
Sbjct: 653  LAMMDRLLTLGNDCTEEIACVKKNINLLIDIYYDALDAPKKGGRKIEVPEALKAELFPHF 712

Query: 360  LEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYD 539
            +EK    +Y+S SILG I+DKV +++    L +N            +  SC+  W+  Y 
Sbjct: 713  MEKHEKKTYRSTSILGKIYDKVKAYEDMD-LSSN------------VHESCLVKWKGLYG 759

Query: 540  QYRSEMTDAL 569
            QYR+EM +AL
Sbjct: 760  QYRTEMRNAL 769


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  162 bits (410), Expect = 7e-38
 Identities = 88/198 (44%), Positives = 121/198 (61%), Gaps = 1/198 (0%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
            QLLE F+P  PW    + + V ++KP +FS  ELE+ELF+ FL+TRF PSY+  VAAD W
Sbjct: 774  QLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKLFLSTRFQPSYAKSVAADNW 833

Query: 183  LAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKT-GEKVEVPSNLRVSRYPHY 359
            LA MD+ L L ++            LQL +IYYDALDAPK  G+K+EVP +L+    PH+
Sbjct: 834  LALMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAGTLPHF 893

Query: 360  LEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYD 539
            +E+    SY S SILG IFD    ++  + +   E +KLP F+ EE+P      W+  Y+
Sbjct: 894  MERGK-NSYVSTSILGQIFDTANMYQ--EEVPNIEVQKLPCFE-EELPEYIFMKWKFLYE 949

Query: 540  QYRSEMTDALNQDDDVKD 593
             YR +M DA+  D D K+
Sbjct: 950  LYRKDMVDAMQLDPDAKN 967


>ref|XP_002883965.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329805|gb|EFH60224.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 934

 Score =  161 bits (408), Expect = 1e-37
 Identities = 88/197 (44%), Positives = 117/197 (59%), Gaps = 1/197 (0%)
 Frame = +3

Query: 3    QLLESFKPSSPW-EQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADC 179
            +LLE FKPS PW      +K    RKP++ S  ELE+ELF+ FL  RF     +G+AADC
Sbjct: 648  KLLEYFKPSEPWVSSSKPSKIYSGRKPSELSEEELEEELFKMFLKARFCKRDVIGMAADC 707

Query: 180  WLAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHY 359
            WL  MD LLTL D+            L+L DIYYDALDAPK G KV++P +L +  +PHY
Sbjct: 708  WLGIMDPLLTLGDESAKEKYERKKNILKLIDIYYDALDAPKKGAKVDLPPDLEIKNFPHY 767

Query: 360  LEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYD 539
            +E+     ++S SILGLIFD V S    +    +E  KL  F+ E +P S M  +   Y+
Sbjct: 768  MERDPKRDFRSTSILGLIFDTVDS-HNAEEPPPSEISKLWYFEDEPVPKSHMDKFTSWYE 826

Query: 540  QYRSEMTDALNQDDDVK 590
             YR+EM+ A+ + D VK
Sbjct: 827  NYRAEMSQAMEETDKVK 843


>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
            gi|482565615|gb|EOA29804.1| hypothetical protein
            CARUB_v10012898mg [Capsella rubella]
          Length = 982

 Score =  160 bits (406), Expect = 2e-37
 Identities = 90/198 (45%), Positives = 115/198 (58%), Gaps = 1/198 (0%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYT-AKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADC 179
            +LLE FKPS PW      +KS   R P  FSP ELE+ELF+ FL   F+ S  +G+AAD 
Sbjct: 702  ELLEHFKPSEPWVSLTPPSKSNSARGPCQFSPEELEEELFEMFLKAGFHASNVIGMAADS 761

Query: 180  WLAYMDRLLTLSDDCTXXXXXXXXXXLQLTDIYYDALDAPKTGEKVEVPSNLRVSRYPHY 359
            WL  MDR L L D+            L+L DIYYDALDAPK G KV +P+ LR   +PHY
Sbjct: 762  WLTIMDRFLILGDESADEKAEMKQKMLELIDIYYDALDAPKKGAKVYLPNELRPDIFPHY 821

Query: 360  LEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEERYD 539
            +E+     ++S SILGLI+D V S  T Q    +E  KLP F+ E +    M+     YD
Sbjct: 822  MERDK--KFKSTSILGLIYDFVQSQTTKQPSPPSEINKLPCFEDEPVSEFHMKECRRWYD 879

Query: 540  QYRSEMTDALNQDDDVKD 593
            +Y+ EMT A+N D   K+
Sbjct: 880  EYKDEMTHAMNTDASNKN 897


>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            tuberosum]
          Length = 1110

 Score =  160 bits (404), Expect = 3e-37
 Identities = 90/200 (45%), Positives = 121/200 (60%), Gaps = 3/200 (1%)
 Frame = +3

Query: 3    QLLESFKPSSPWEQKYTAKSVRHRKPTDFSPGELEDELFQQFLTTRFNPSYSMGVAADCW 182
            QLL+ F  S PW + ++     HR+P +FS  E E +LFQ FL TR  P+YSM  A+  W
Sbjct: 814  QLLKYFTASRPWSRIHSTPKTLHREPNNFSAEEREHDLFQTFLETRM-PNYSMADASANW 872

Query: 183  LAYMDRLLTLSDDCTXXXXXXXXXX---LQLTDIYYDALDAPKTGEKVEVPSNLRVSRYP 353
             A MDRLL L  + T              +L D+YYDA+DAPK+G KV +P  L+V ++P
Sbjct: 873  YALMDRLLILGKNNTTENEEIKSVKEKLFELIDLYYDAIDAPKSGNKVYIPKRLKVDKFP 932

Query: 354  HYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEARKLPAFDGEEIPASCMRLWEER 533
            H+L+K    SY S S+LG I+D+V  FK  +   A E +KL AF+   IP +C+RLWEER
Sbjct: 933  HFLQKKE--SYHSTSVLGEIYDRVEKFK-AEEPAAVEIKKLSAFE-VGIPDTCLRLWEER 988

Query: 534  YDQYRSEMTDALNQDDDVKD 593
            Y  YR EM +ALN   + K+
Sbjct: 989  YRNYRFEMKEALNTSSESKN 1008