BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00023313
         (775 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme...   172   2e-40
emb|CBI28010.3| unnamed protein product [Vitis vinifera]              162   9e-38
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...   162   9e-38
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr...   161   3e-37
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr...   161   3e-37
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus...   157   3e-36
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no...   157   4e-36
ref|XP_007018505.1| RNA-dependent RNA polymerase family protein,...   157   4e-36
ref|XP_007152981.1| hypothetical protein PHAVU_004G1764000g, par...   155   2e-35
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun...   155   2e-35
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme...   155   2e-35
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme...   154   4e-35
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]   152   1e-34
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ...   149   8e-34
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme...   149   1e-33
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid...   148   2e-33
dbj|BAF01243.1| hypothetical protein [Arabidopsis thaliana]           148   2e-33
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu...   147   4e-33
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu...   147   4e-33
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme...   145   1e-32

>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            tuberosum]
          Length = 1110

 Score =  172 bits (435), Expect = 2e-40
 Identities = 91/185 (49%), Positives = 128/185 (69%), Gaps = 5/185 (2%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            V +P  L+V K+PH+L+K    SY S S+LG I+D+V  FK  +   A E++KL AF+ G
Sbjct: 920  VYIPKRLKVDKFPHFLQKKE--SYHSTSVLGEIYDRVEKFKAEEPA-AVEIKKLSAFEVG 976

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
             IP +C+RLWEERY  YR EM +ALN   + K+D A++V +KYKQ+LYEAP++ ES R  
Sbjct: 977  -IPDTCLRLWEERYRNYRFEMKEALNTSSESKNDLADQVIKKYKQLLYEAPDMEESIRST 1035

Query: 363  EEIYNEALAIYNIVYDYARIKG-VGRCGFAWKVAGQALC----EFYAKKLDEDPIICTKS 527
             ++YN+ALAIY + YDYA+  G V +CGFAWKVAG ALC    E +AK+ ++  +  + S
Sbjct: 1036 TDMYNDALAIYCVTYDYAKAIGDVRKCGFAWKVAGAALCKLHAELHAKEHNQKVMAMSPS 1095

Query: 528  VLSEL 542
            +L +L
Sbjct: 1096 ILHKL 1100


>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score =  162 bits (411), Expect = 9e-38
 Identities = 84/183 (45%), Positives = 118/183 (64%), Gaps = 2/183 (1%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            V V   L+  K+PH++ + +  SY S SILG I+D V SF+   +    E+ +LP F+  
Sbjct: 750  VNVSKELKAEKFPHFMGRES--SYHSTSILGQIYDAVESFQPENQ-STKEIWRLPLFNID 806

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
             +P +C+R W++RYDQYRSEM  AL    + KD+YA EV  KYKQ+LY A E  ES R  
Sbjct: 807  AVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNL 866

Query: 363  EEIYNEALAIYNIVYDYARIKG--VGRCGFAWKVAGQALCEFYAKKLDEDPIICTKSVLS 536
            E+I++EALAIY++ Y++  I G  V  C F W+VAG+ALC+ Y  KL E  ++C  SVL 
Sbjct: 867  EDIFDEALAIYHVTYEFV-INGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLR 925

Query: 537  ELF 545
            ++F
Sbjct: 926  QVF 928


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
            vinifera]
          Length = 943

 Score =  162 bits (411), Expect = 9e-38
 Identities = 84/183 (45%), Positives = 118/183 (64%), Gaps = 2/183 (1%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            V V   L+  K+PH++ + +  SY S SILG I+D V SF+   +    E+ +LP F+  
Sbjct: 764  VNVSKELKAEKFPHFMGRES--SYHSTSILGQIYDAVESFQPENQ-STKEIWRLPLFNID 820

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
             +P +C+R W++RYDQYRSEM  AL    + KD+YA EV  KYKQ+LY A E  ES R  
Sbjct: 821  AVPQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNL 880

Query: 363  EEIYNEALAIYNIVYDYARIKG--VGRCGFAWKVAGQALCEFYAKKLDEDPIICTKSVLS 536
            E+I++EALAIY++ Y++  I G  V  C F W+VAG+ALC+ Y  KL E  ++C  SVL 
Sbjct: 881  EDIFDEALAIYHVTYEFV-INGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLR 939

Query: 537  ELF 545
            ++F
Sbjct: 940  QVF 942


>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843311|ref|XP_006475557.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
            sinensis] gi|557554498|gb|ESR64512.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1013

 Score =  161 bits (407), Expect = 3e-37
 Identities = 84/181 (46%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            VEVP +L+V K+P Y+ +    S++S S+LG I++ V S++   R    E+ KLP FD G
Sbjct: 833  VEVPEDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDR-SVTEIWKLPCFDDG 891

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
             +P +C+  W+  YDQYR EM +A+++    +++ AE V +KYKQ+LY A E  +STR  
Sbjct: 892  -VPEACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQSTRTL 950

Query: 363  EEIYNEALAIYNIVYDYARI-KGVGRCGFAWKVAGQALCEFYAKKLDEDPIICTKSVLSE 539
            EEIYNEALAIYNI YD A   + V  C FAW+VAG AL +FYA++  +  ++C+ SVL E
Sbjct: 951  EEIYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASVLRE 1010

Query: 540  L 542
            +
Sbjct: 1011 I 1011


>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
            gi|568843309|ref|XP_006475556.1| PREDICTED: probable
            RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
            sinensis] gi|557554497|gb|ESR64511.1| hypothetical
            protein CICLE_v10007331mg [Citrus clementina]
          Length = 1015

 Score =  161 bits (407), Expect = 3e-37
 Identities = 84/181 (46%), Positives = 121/181 (66%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            VEVP +L+V K+P Y+ +    S++S S+LG I++ V S++   R    E+ KLP FD G
Sbjct: 835  VEVPEDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDR-SVTEIWKLPCFDDG 893

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
             +P +C+  W+  YDQYR EM +A+++    +++ AE V +KYKQ+LY A E  +STR  
Sbjct: 894  -VPEACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQSTRTL 952

Query: 363  EEIYNEALAIYNIVYDYARI-KGVGRCGFAWKVAGQALCEFYAKKLDEDPIICTKSVLSE 539
            EEIYNEALAIYNI YD A   + V  C FAW+VAG AL +FYA++  +  ++C+ SVL E
Sbjct: 953  EEIYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASVLRE 1012

Query: 540  L 542
            +
Sbjct: 1013 I 1013


>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus guttatus]
          Length = 878

 Score =  157 bits (398), Expect = 3e-36
 Identities = 84/183 (45%), Positives = 117/183 (63%), Gaps = 3/183 (1%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            V+VP  LR   YPH++EK +  SY S S+LG I+D+V + K    +   E+ KLP FD  
Sbjct: 691  VKVPEELRAEMYPHHMEKGSELSYHSSSVLGQIYDRVDALKN-DFVPRKEIWKLPCFDV- 748

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
             IP   V++W+ RY+ YR EMT AL   ++ ++D A+EV +KYKQ+LYEA ++ ES +  
Sbjct: 749  PIPEIYVKMWKSRYESYRREMTKALKSGNESRNDAADEVIKKYKQLLYEAGDMEESAKSS 808

Query: 363  EEIYNEALAIYNIVYDYARIKGVGRCGFAWKVAGQALCEFYAKKL---DEDPIICTKSVL 533
            E IY+EA+AIY++ YDYA   GV +C FAW++A  ALC   A KL    E P+    S+L
Sbjct: 809  EVIYDEAIAIYHVTYDYAMEHGVEKCNFAWRIAASALCNLCAWKLAGPREKPLPILPSLL 868

Query: 534  SEL 542
             EL
Sbjct: 869  REL 871


>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
          Length = 521

 Score =  157 bits (397), Expect = 4e-36
 Identities = 87/182 (47%), Positives = 117/182 (64%), Gaps = 2/182 (1%)
 Frame = +3

Query: 3   VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
           VEVP  L+  ++PHY+EK N  S+ SRSILG I+D+V +++        E+ KLP F+  
Sbjct: 343 VEVPRELKPNRFPHYMEKQN--SFHSRSILGWIYDEVDAYQLEDHSN-KEIFKLPHFEV- 398

Query: 183 EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
           E+P +C+  W+  Y  YR +M DAL   D  K + AEEV +KYK++LY A EL EST+  
Sbjct: 399 EVPEACLTKWKAHYKDYRDDMCDALLAKDVGKTEAAEEVKRKYKRLLYGAEELEESTKKM 458

Query: 363 EEIYNEALAIYNIVYDYA-RIKGVGRCGFAWKVAGQALCEFYA-KKLDEDPIICTKSVLS 536
           EEIYNEALAIY++ YDYA   + V  C FAW +AG AL + +A KK+ E    C  SVL 
Sbjct: 459 EEIYNEALAIYHVCYDYAISQRKVSYCSFAWNIAGSALLKLHAFKKIGERAFFCLPSVLK 518

Query: 537 EL 542
           E+
Sbjct: 519 EV 520


>ref|XP_007018505.1| RNA-dependent RNA polymerase family protein, putative isoform 1
           [Theobroma cacao] gi|508723833|gb|EOY15730.1|
           RNA-dependent RNA polymerase family protein, putative
           isoform 1 [Theobroma cacao]
          Length = 328

 Score =  157 bits (397), Expect = 4e-36
 Identities = 92/186 (49%), Positives = 110/186 (59%), Gaps = 5/186 (2%)
 Frame = +3

Query: 3   VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
           +EVP  LR   +PHYLE+    S++S SILG I+D V S+   + L   EVRKLP FD G
Sbjct: 147 IEVPRELRADAFPHYLERQK--SFKSASILGKIYDFVKSYG--EELPRKEVRKLPCFDVG 202

Query: 183 EIPTSCVRLWEERYDQYRSEMTDALNQDD----DVKDDYAEEVNQKYKQMLYEAPELNES 350
             P  C   W E Y QYR +MT  L   D    +++D  A  V  KYKQ LY    L + 
Sbjct: 203 -FPQDCREKWTELYKQYREDMTQTLQTLDGKSKELRDVAANAVYNKYKQELYGGAVLEQR 261

Query: 351 TRIREEIYNEALAIYNIVYDYA-RIKGVGRCGFAWKVAGQALCEFYAKKLDEDPIICTKS 527
            R  ++IY EALAIYNI YDYA RI  VG+CGFAWKVAG AL   YA +  E  + C  S
Sbjct: 262 QRPLDQIYKEALAIYNISYDYAIRIDDVGKCGFAWKVAGSALLSLYASEQGEKTLSCAPS 321

Query: 528 VLSELF 545
           VL ELF
Sbjct: 322 VLKELF 327


>ref|XP_007152981.1| hypothetical protein PHAVU_004G1764000g, partial [Phaseolus
           vulgaris] gi|561026290|gb|ESW24975.1| hypothetical
           protein PHAVU_004G1764000g, partial [Phaseolus vulgaris]
          Length = 180

 Score =  155 bits (391), Expect = 2e-35
 Identities = 86/182 (47%), Positives = 116/182 (63%), Gaps = 2/182 (1%)
 Frame = +3

Query: 3   VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
           V+VP  LR  ++PHY+EK  L  + S SILGLI+D V +++T   L   E+R LP FD  
Sbjct: 1   VQVPDELRAERFPHYMEKDKL--FTSTSILGLIYDWVGAWQTKDLLSGEEIRLLPCFDV- 57

Query: 183 EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAP-ELNESTRI 359
           E+P SC+  WE +Y++YR  MTDAL   D  K D A +V +KYK+ LY A   + +S + 
Sbjct: 58  EVPPSCMEKWETKYEEYRMNMTDALK--DISKSDEAAKVIRKYKEELYGATARMEDSEKN 115

Query: 360 REEIYNEALAIYNIVYDYARI-KGVGRCGFAWKVAGQALCEFYAKKLDEDPIICTKSVLS 536
             +IYNEALAIY + Y+YAR+ K V +C FAWKVAG AL   Y  K  ++ + C  SVL 
Sbjct: 116 VCDIYNEALAIYRVCYEYARLRKSVSKCTFAWKVAGSALTSLYIIKHKQNSLNCAPSVLR 175

Query: 537 EL 542
           E+
Sbjct: 176 EI 177


>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
            gi|462399806|gb|EMJ05474.1| hypothetical protein
            PRUPE_ppa001584mg [Prunus persica]
          Length = 798

 Score =  155 bits (391), Expect = 2e-35
 Identities = 87/183 (47%), Positives = 121/183 (66%), Gaps = 3/183 (1%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            V VP  L+   +PHY+E+ N  SY+S SILGLI+D V +++  +     EV+KLP FD  
Sbjct: 619  VVVPGELKSNLFPHYMERVN--SYKSTSILGLIYDTVNAYQA-EDASIKEVKKLPMFDV- 674

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDD-DVKDDYAEEVNQKYKQMLYE-APELNESTR 356
            E+P  C++ W E Y  YRSEM+ A+  DD D K++ A++V +KYK++LY  A +L  STR
Sbjct: 675  EVPEECLKKWREHYQHYRSEMSSAMQDDDRDSKNNAADKVLRKYKEILYGGAEDLENSTR 734

Query: 357  IREEIYNEALAIYNIVYDYARIKG-VGRCGFAWKVAGQALCEFYAKKLDEDPIICTKSVL 533
               EI++EALAIY + YD+A  +G VG+C FAWKVAG ALC++Y  K     I  + SVL
Sbjct: 735  PLHEIFDEALAIYRVTYDHAISQGAVGKCCFAWKVAGSALCKYYMNKQGARTIEASFSVL 794

Query: 534  SEL 542
             +L
Sbjct: 795  KDL 797


>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
            lycopersicum]
          Length = 1011

 Score =  155 bits (391), Expect = 2e-35
 Identities = 82/181 (45%), Positives = 114/181 (62%), Gaps = 1/181 (0%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            V +P  L+  K+PHY+EK N  SY S SILG I+D V S+   + L   E+ KLP F+  
Sbjct: 832  VSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPD-EDLCITEISKLPCFEV- 889

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
            EIP  C+ LW  RY++Y+ +MT A+N D +++     EV +KYK +LY A E  ++ R  
Sbjct: 890  EIPQRCMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLLYGAVEFEQTVRKT 949

Query: 363  EEIYNEALAIYNIVYDYARIK-GVGRCGFAWKVAGQALCEFYAKKLDEDPIICTKSVLSE 539
            E+I++EALAIY++ YD ARI   + +CGFAWKVAG ALC  +A    E  +    SVL E
Sbjct: 950  EDIFDEALAIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYRKEKDLPILPSVLQE 1009

Query: 540  L 542
            +
Sbjct: 1010 I 1010


>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
            vesca subsp. vesca]
          Length = 1405

 Score =  154 bits (388), Expect = 4e-35
 Identities = 85/182 (46%), Positives = 117/182 (64%), Gaps = 2/182 (1%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            V+VP  L+V  +PHY+ K+   SY S SILG I+++V   +T  R    EV KLPAFD  
Sbjct: 1226 VDVPKELKVSCFPHYMGKNR--SYPSTSILGSIYNRVDEHQTEDR-SLKEVEKLPAFDEN 1282

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDD-DVKDDYAEEVNQKYKQMLYEAPELNESTRI 359
            E+P +C+  W E + QYR EM  AL+ DD   K+  A+ V +KY+++LYEA +  ES R 
Sbjct: 1283 EVPDACLDKWAELHRQYRKEMASALDDDDKQSKNQSADVVIRKYRKILYEANDFEESRRP 1342

Query: 360  REEIYNEALAIYNIVYDYA-RIKGVGRCGFAWKVAGQALCEFYAKKLDEDPIICTKSVLS 536
             EEIYNEA AIY++ YD+A R+  V  C FAW+VAG+ALC+ +A+  +E       SVL 
Sbjct: 1343 IEEIYNEAHAIYHVCYDHAKRVGNVKVCSFAWRVAGKALCQLHARNNNERFCTIVSSVLM 1402

Query: 537  EL 542
            E+
Sbjct: 1403 EI 1404


>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
          Length = 1202

 Score =  152 bits (384), Expect = 1e-34
 Identities = 82/183 (44%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            V V   L+  K+PH++ + +  SY S SILG I+D V SF+   +   + V         
Sbjct: 1033 VNVSKELKAEKFPHFMGRES--SYHSTSILGQIYDAVESFQPENQSTKDAV--------- 1081

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
              P +C+R W++RYDQYRSEM  AL    + KD+YA EV  KYKQ+LY A E  ES R  
Sbjct: 1082 --PQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRKL 1139

Query: 363  EEIYNEALAIYNIVYDYARIKG--VGRCGFAWKVAGQALCEFYAKKLDEDPIICTKSVLS 536
            E+I++EALAIY++ Y++A I G  V  C F W+VAG+ALC+ Y  KL E  ++C  SVL 
Sbjct: 1140 EDIFDEALAIYHVTYEFA-INGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLR 1198

Query: 537  ELF 545
            ++F
Sbjct: 1199 QVF 1201


>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
            RNA polymerase family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 981

 Score =  149 bits (377), Expect = 8e-34
 Identities = 81/182 (44%), Positives = 109/182 (59%), Gaps = 1/182 (0%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            V +P+ LR   +PHY+E+     ++S SILGLI+D V S  T +   ++E+ KLP F+  
Sbjct: 804  VYLPNELRPDIFPHYMEREK--KFKSTSILGLIYDFVKSQTTEEPTPSSEISKLPCFEDE 861

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
             +    +      YD YRSEMT A+  D   KD+ A EV Q+YKQ  Y A    +S +  
Sbjct: 862  PVSEFHMEKCRRWYDNYRSEMTQAMKTD---KDESANEVIQRYKQEFYGAAGFEDSKKSL 918

Query: 363  EEIYNEALAIYNIVYDYARIKGVGRCGFAWKVAGQALCEFY-AKKLDEDPIICTKSVLSE 539
            EE+Y +AL +Y IVYDYA   GV +CGF WKVAG  LC FY  KK+ E  ++C  SVL E
Sbjct: 919  EELYPQALTLYKIVYDYAIHAGVSKCGFVWKVAGPVLCRFYLMKKMQEKSLVCAPSVLKE 978

Query: 540  LF 545
            L+
Sbjct: 979  LW 980


>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
            sativus]
          Length = 1056

 Score =  149 bits (376), Expect = 1e-33
 Identities = 81/181 (44%), Positives = 109/181 (60%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            +EVP +L+ G  PH++E+    SY S SILG IFD    ++  + +   EV+KLP F+  
Sbjct: 879  IEVPKHLKAGTLPHFMERGK-NSYVSTSILGQIFDTANMYQ--EEVPNIEVQKLPCFEE- 934

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
            E+P      W+  Y+ YR +M DA+  D D K+  AE   +KYK++LY A EL  S R  
Sbjct: 935  ELPEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSN 994

Query: 363  EEIYNEALAIYNIVYDYARIKGVGRCGFAWKVAGQALCEFYAKKLDEDPIICTKSVLSEL 542
            EE+Y EALAIY + YD+A  + V  CGFAWKVAG AL + YA K  E    C  SV+ E+
Sbjct: 995  EEVYQEALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFKLYAIKHSERSFHCLPSVMREI 1054

Query: 543  F 545
            F
Sbjct: 1055 F 1055


>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
            gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
            Full=Probable RNA-dependent RNA polymerase 5;
            Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
            5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
            polymerase 5 [Arabidopsis thaliana]
          Length = 977

 Score =  148 bits (374), Expect = 2e-33
 Identities = 85/185 (45%), Positives = 111/185 (60%), Gaps = 4/185 (2%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDG- 179
            V +P+ L+   +PHY+E+     +QS SILGLIFD V S  T +   ++E+ KLP F+  
Sbjct: 800  VYLPNKLKPDIFPHYMERDK--KFQSTSILGLIFDFVKSQTTEEPSPSSEISKLPCFEDE 857

Query: 180  --GEIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNEST 353
               E      RLW   YD YR+EMT A+  D   KD+ A EV Q+YKQ  Y A    +S 
Sbjct: 858  PVSEFHMQKCRLW---YDNYRTEMTQAMKTD---KDESANEVIQRYKQEFYGAAGFEDSK 911

Query: 354  RIREEIYNEALAIYNIVYDYARIKGVGRCGFAWKVAGQALCEFYA-KKLDEDPIICTKSV 530
            +  EE+Y +ALA+Y IVYDYA   GV +C F WKVAG  LC FY  KK+ E  ++C  SV
Sbjct: 912  KSLEELYPQALALYKIVYDYAIHAGVSKCRFVWKVAGPVLCRFYLNKKMQEKCLVCAPSV 971

Query: 531  LSELF 545
            L EL+
Sbjct: 972  LKELW 976


>dbj|BAF01243.1| hypothetical protein [Arabidopsis thaliana]
          Length = 339

 Score =  148 bits (374), Expect = 2e-33
 Identities = 85/185 (45%), Positives = 111/185 (60%), Gaps = 4/185 (2%)
 Frame = +3

Query: 3   VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDG- 179
           V +P+ L+   +PHY+E+     +QS SILGLIFD V S  T +   ++E+ KLP F+  
Sbjct: 162 VYLPNKLKPDIFPHYMERDK--KFQSTSILGLIFDFVKSQTTEEPSPSSEISKLPCFEDE 219

Query: 180 --GEIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNEST 353
              E      RLW   YD YR+EMT A+  D   KD+ A EV Q+YKQ  Y A    +S 
Sbjct: 220 PVSEFHMQKCRLW---YDNYRTEMTQAMKTD---KDESANEVIQRYKQEFYGAAGFEDSK 273

Query: 354 RIREEIYNEALAIYNIVYDYARIKGVGRCGFAWKVAGQALCEFYA-KKLDEDPIICTKSV 530
           +  EE+Y +ALA+Y IVYDYA   GV +C F WKVAG  LC FY  KK+ E  ++C  SV
Sbjct: 274 KSLEELYPQALALYKIVYDYAIHAGVSKCRFVWKVAGPVLCRFYLNKKMQEKCLVCAPSV 333

Query: 531 LSELF 545
           L EL+
Sbjct: 334 LKELW 338


>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334280|gb|ERP58267.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 877

 Score =  147 bits (371), Expect = 4e-33
 Identities = 81/179 (45%), Positives = 115/179 (64%), Gaps = 2/179 (1%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            +EVP  L+   +PH++ K+   +Y+S SILG I+DKV +++    L +N+V KLP FD  
Sbjct: 698  IEVPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMD-LSSNDVWKLPCFDD- 755

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
            E+    +  W+E Y QYR EM +AL   ++  +D A EV +KYK+ LYEA E N S R  
Sbjct: 756  EVHELYLVKWKELYGQYRKEMRNALKAGEE-SNDKANEVIRKYKEFLYEAAEFNLSKRRD 814

Query: 363  EEIYNEALAIYNIVYDYARIKG-VGRCGFAWKVAGQALCEFYA-KKLDEDPIICTKSVL 533
            EEI+ EA+A+Y + Y++A+ +G VG C FAW+VAG ALC  Y  K   E P+IC+ S L
Sbjct: 815  EEIFEEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQGERPMICSPSAL 873


>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
            gi|550334279|gb|ERP58266.1| hypothetical protein
            POPTR_0007s06560g [Populus trichocarpa]
          Length = 899

 Score =  147 bits (371), Expect = 4e-33
 Identities = 81/179 (45%), Positives = 115/179 (64%), Gaps = 2/179 (1%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            +EVP  L+   +PH++ K+   +Y+S SILG I+DKV +++    L +N+V KLP FD  
Sbjct: 720  IEVPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMD-LSSNDVWKLPCFDD- 777

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKDDYAEEVNQKYKQMLYEAPELNESTRIR 362
            E+    +  W+E Y QYR EM +AL   ++  +D A EV +KYK+ LYEA E N S R  
Sbjct: 778  EVHELYLVKWKELYGQYRKEMRNALKAGEE-SNDKANEVIRKYKEFLYEAAEFNLSKRRD 836

Query: 363  EEIYNEALAIYNIVYDYARIKG-VGRCGFAWKVAGQALCEFYA-KKLDEDPIICTKSVL 533
            EEI+ EA+A+Y + Y++A+ +G VG C FAW+VAG ALC  Y  K   E P+IC+ S L
Sbjct: 837  EEIFEEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQGERPMICSPSAL 895


>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
          Length = 988

 Score =  145 bits (367), Expect = 1e-32
 Identities = 82/184 (44%), Positives = 116/184 (63%), Gaps = 3/184 (1%)
 Frame = +3

Query: 3    VEVPSNLRVGKYPHYLEKSNLGSYQSRSILGLIFDKVASFKTTQRLEANEVRKLPAFDGG 182
            V+VP++L    +PHY+EK    S+ S SILGLI+D+V  +     +   E+ KLP FD  
Sbjct: 808  VQVPNDLIAELFPHYMEKDK--SFTSTSILGLIYDEVEIWLENDMV--GEIWKLPCFDV- 862

Query: 183  EIPTSCVRLWEERYDQYRSEMTDALNQDDDVKD-DYAEEVNQKYKQMLYEAP-ELNESTR 356
            E+P SC+  W+ +Y++YR +MTDALN  D  K  + A EVN+KYK+  Y    E+    +
Sbjct: 863  EVPPSCLEKWKTKYEEYRKDMTDALNLKDKSKSHEEAAEVNRKYKEEFYGPTLEMEGCLK 922

Query: 357  IREEIYNEALAIYNIVYDYARIKG-VGRCGFAWKVAGQALCEFYAKKLDEDPIICTKSVL 533
               +I+NEALA+YN+ Y+YA +K  V RCGFAWK+AG AL   Y  K +E  + C  SV+
Sbjct: 923  SIGDIFNEALAVYNVSYEYAMLKKEVKRCGFAWKIAGSALTRLYIIKQNEKALNCDPSVV 982

Query: 534  SELF 545
             E+F
Sbjct: 983  REIF 986