BLASTX nr result

ID: Papaver27_contig00023308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00023308
         (1403 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006829172.1| hypothetical protein AMTR_s00001p00270600 [A...    60   2e-06
ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like isofo...    58   9e-06

>ref|XP_006829172.1| hypothetical protein AMTR_s00001p00270600 [Amborella trichopoda]
            gi|548834151|gb|ERM96588.1| hypothetical protein
            AMTR_s00001p00270600 [Amborella trichopoda]
          Length = 641

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
 Frame = +3

Query: 792  SLDLSSNGVLLKNVYGVRSLTRQDFDIDIREGVLSKCGKFGNVVRCVLD--DEGNALLEF 965
            S+ + S  +LLKN++  ++ T  DFD+DI+E V  +C KFG +    +D   EG+  L F
Sbjct: 541  SIGVPSECLLLKNMFDPKAETEPDFDVDIKEDVQEECSKFGTLKHIFVDKISEGHVYLRF 600

Query: 966  DDARAAALCRKGMHLKFFRCRLV 1034
            D A AA   ++ MH ++F  +++
Sbjct: 601  DSATAAIGAQRAMHGRWFAGKMI 623


>ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like isoform X1 [Glycine max]
          Length = 554

 Score = 58.2 bits (139), Expect = 9e-06
 Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = +3

Query: 807  SNGVLLKNVYGVRSLTRQDFDIDIREGVLSKCGKFGNVVRCVLDDE--GNALLEFDDARA 980
            S  +LLKN++   + T  DFDIDI+E V  +C K+G V    +D +  G   L FD   A
Sbjct: 459  SECLLLKNMFDPSTETEPDFDIDIKEDVEEECSKYGRVKHIFVDKKSAGFVYLRFDTVEA 518

Query: 981  AALCRKGMHLKFFRCRLV 1034
            A+  +  MHL++F  RL+
Sbjct: 519  ASAAQHAMHLRWFARRLI 536


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