BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00021888
         (791 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   351   2e-94
ref|XP_007041228.1| Pseudouridine synthase family protein isofor...   346   6e-93
ref|XP_007041230.1| Pseudouridine synthase family protein isofor...   340   3e-91
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ...   338   1e-90
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   334   2e-89
ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   332   9e-89
gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]      330   4e-88
ref|XP_007148561.1| hypothetical protein PHAVU_006G218900g [Phas...   330   5e-88
gb|EYU26478.1| hypothetical protein MIMGU_mgv1a018737mg [Mimulus...   327   3e-87
ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like ...   325   9e-87
ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Popu...   325   1e-86
ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutr...   325   2e-86
ref|XP_007148560.1| hypothetical protein PHAVU_006G218900g [Phas...   324   2e-86
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   324   2e-86
ref|XP_007041229.1| Pseudouridine synthase family protein isofor...   323   4e-86
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   323   4e-86
ref|NP_172451.2| pseudouridine synthase family protein [Arabidop...   323   6e-86
dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana] g...   323   6e-86
gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]                       323   6e-86
ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [S...   322   1e-85

>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
           gi|297739525|emb|CBI29707.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  351 bits (900), Expect = 2e-94
 Identities = 176/261 (67%), Positives = 207/261 (79%)
 Frame = +2

Query: 5   IISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVV 184
           I  SSRTDAGVHALSNVCHVDVERISKR+PGEVLPP+EP VVR AVNH+L K EGDV V+
Sbjct: 105 IFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDVMVI 164

Query: 185 DVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVG 364
           DVRC+P DFHAR++A ERTYFYR+LSGPEPLS+FE+ RAWHV E+LD++A+QKACRVLVG
Sbjct: 165 DVRCVPPDFHARYKARERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVG 224

Query: 365 DHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGI 544
            HDFSSFR  GCQAKSPI+TL EL V+EV  TPYFPS  ER Q N  E++P+  S+ +  
Sbjct: 225 CHDFSSFRAAGCQAKSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNA-- 282

Query: 545 DVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGT 724
           +V      +  D+L            RR+ HRC+++TARARSFLYHQVRLLVGV+K  GT
Sbjct: 283 EVPDSPSTANHDRLDGFNGAGQGFGVRRR-HRCFLVTARARSFLYHQVRLLVGVIKCVGT 341

Query: 725 GEITTSDVERILNAKTVTATS 787
           G++T SDVERILNAKTVTA S
Sbjct: 342 GDLTVSDVERILNAKTVTAAS 362


>ref|XP_007041228.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
           gi|508705163|gb|EOX97059.1| Pseudouridine synthase
           family protein isoform 1 [Theobroma cacao]
          Length = 374

 Score =  346 bits (887), Expect = 6e-93
 Identities = 174/261 (66%), Positives = 201/261 (77%)
 Frame = +2

Query: 5   IISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVV 184
           I  SSRTDAGVHALSNVCHVDVERISKR+PGEVLPP+EP VVR AVNH+L K EGD+ V+
Sbjct: 94  IFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITVI 153

Query: 185 DVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVG 364
           DVRC+P DFHAR++A ERTYFYR+LSG EPLSTFE+ RAWHV E+LD+ A+Q+AC+VLVG
Sbjct: 154 DVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLVG 213

Query: 365 DHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGI 544
            HDFSSFR  GCQAKSPI+TL EL V+E   TPYFPS  E+ Q N   +D    S    I
Sbjct: 214 HHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEI 273

Query: 545 DVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGT 724
           D+     ++  D++            RR+ H CYV+TARARSFLYHQVRLLVGVLK  GT
Sbjct: 274 DLPIDSFSNSDDEVGSNGITDLGFGIRRR-HHCYVVTARARSFLYHQVRLLVGVLKCVGT 332

Query: 725 GEITTSDVERILNAKTVTATS 787
           GE+TTSDVERILNAKTVTA S
Sbjct: 333 GELTTSDVERILNAKTVTAAS 353


>ref|XP_007041230.1| Pseudouridine synthase family protein isoform 3 [Theobroma cacao]
           gi|508705165|gb|EOX97061.1| Pseudouridine synthase
           family protein isoform 3 [Theobroma cacao]
          Length = 373

 Score =  340 bits (873), Expect = 3e-91
 Identities = 173/261 (66%), Positives = 201/261 (77%)
 Frame = +2

Query: 5   IISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVV 184
           I  SSRTDAGVHALSNVCHVDVERISKR+PGEVLPP+EP VVR AVNH+L + EGD+ V+
Sbjct: 94  IFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFL-QSEGDITVI 152

Query: 185 DVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVG 364
           DVRC+P DFHAR++A ERTYFYR+LSG EPLSTFE+ RAWHV E+LD+ A+Q+AC+VLVG
Sbjct: 153 DVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLVG 212

Query: 365 DHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGI 544
            HDFSSFR  GCQAKSPI+TL EL V+E   TPYFPS  E+ Q N   +D    S    I
Sbjct: 213 HHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEI 272

Query: 545 DVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGT 724
           D+     ++  D++            RR+ H CYV+TARARSFLYHQVRLLVGVLK  GT
Sbjct: 273 DLPIDSFSNSDDEVGSNGITDLGFGIRRR-HHCYVVTARARSFLYHQVRLLVGVLKCVGT 331

Query: 725 GEITTSDVERILNAKTVTATS 787
           GE+TTSDVERILNAKTVTA S
Sbjct: 332 GELTTSDVERILNAKTVTAAS 352


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 369

 Score =  338 bits (867), Expect = 1e-90
 Identities = 173/258 (67%), Positives = 201/258 (77%)
 Frame = +2

Query: 14  SSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVR 193
           SSRTDAGVHALSNVCHVD++RISKRRPGEVLPP+EP VV  AVNH+L K++ D+ V+DVR
Sbjct: 95  SSRTDAGVHALSNVCHVDIQRISKRRPGEVLPPHEPAVVGRAVNHFLQKHDSDLMVIDVR 154

Query: 194 CIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHD 373
           C+P+DFHAR +A ERTYFYR+LSGPEPLSTFE+ RAWHV EEL + A+Q+ACRVLVG HD
Sbjct: 155 CVPSDFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGCHD 214

Query: 374 FSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGIDVT 553
           FSSFR  GCQAKSPI+TL ELSV EV  +PYFPS ++R+Q N +  D    S+ +  D+ 
Sbjct: 215 FSSFRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSNNTETDIP 274

Query: 554 CKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEI 733
                SI DK+            RR  HRC V+TARARSFLYHQVRLLVGVLKAAGTG +
Sbjct: 275 PISNPSI-DKVITSSQDAGFGKRRR--HRCLVVTARARSFLYHQVRLLVGVLKAAGTGNL 331

Query: 734 TTSDVERILNAKTVTATS 787
           T  DVERILNAKTVTA S
Sbjct: 332 TIPDVERILNAKTVTAAS 349


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 372

 Score =  334 bits (856), Expect = 2e-89
 Identities = 167/258 (64%), Positives = 201/258 (77%)
 Frame = +2

Query: 14  SSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVR 193
           SSRTDAGVHALSNVCHVD+ERISKR+PGEVLPP+EP VVR AVNH+L K EGD+ V DVR
Sbjct: 100 SSRTDAGVHALSNVCHVDIERISKRKPGEVLPPHEPAVVRRAVNHFLQKNEGDIMVTDVR 159

Query: 194 CIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHD 373
           C+P+DFHAR +A ERTYFYR LSGPEPLSTFE+ RAWHV E+LDIVA+Q+AC+VLVG HD
Sbjct: 160 CVPSDFHARFKAQERTYFYRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHD 219

Query: 374 FSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGIDVT 553
           FSSFR +GCQAKSPI+TL E+SV+EVAST YFPS  ER+Q     ++       + + + 
Sbjct: 220 FSSFRASGCQAKSPIRTLAEISVSEVASTLYFPSITEREQNCENGENSCCKKFKTDLPMG 279

Query: 554 CKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEI 733
                ++ +               R+ HRC+V+TARARSFLYHQVRLLVGVLK+ G G++
Sbjct: 280 SHSNTNVAESSFGETDLGFGI---RRRHRCFVVTARARSFLYHQVRLLVGVLKSVGIGDL 336

Query: 734 TTSDVERILNAKTVTATS 787
           TTSDVERIL+AK+VTA S
Sbjct: 337 TTSDVERILSAKSVTAAS 354


>ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Cicer
           arietinum]
          Length = 374

 Score =  332 bits (851), Expect = 9e-89
 Identities = 168/262 (64%), Positives = 202/262 (77%), Gaps = 1/262 (0%)
 Frame = +2

Query: 5   IISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVV 184
           +I SSRTDAGVHALSNVCHVD+ERISKR+PGEVLPP+EP VVR AVNH+L K  GD+ V+
Sbjct: 98  VICSSRTDAGVHALSNVCHVDIERISKRKPGEVLPPHEPVVVRRAVNHFLQKQNGDLMVI 157

Query: 185 DVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVG 364
           DVRC+P+DFHAR++A ERTYFYR+LSG EPLST E+ RAWHV EEL++ A+Q+ACRVLVG
Sbjct: 158 DVRCVPSDFHARYKAQERTYFYRLLSGSEPLSTLEKDRAWHVPEELNLPAMQEACRVLVG 217

Query: 365 DHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGI 544
            HDFSSFR  GCQAKSPI+TL ELSV EV  +PYFPS ++R++   +  D  +    S  
Sbjct: 218 HHDFSSFRAAGCQAKSPIRTLDELSVVEVIQSPYFPSVMDRERQIKVADD--LHGCGSNA 275

Query: 545 DVTCKVPASIK-DKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAG 721
           +    V +S + DK+            +R+ HRC V+TARAR+FLYHQVRLLVGVLKA G
Sbjct: 276 EAVIPVSSSARIDKV--RASNEGVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKAVG 333

Query: 722 TGEITTSDVERILNAKTVTATS 787
           TG +T  DVERILNAKTVTA S
Sbjct: 334 TGNLTIPDVERILNAKTVTAAS 355


>gb|ABE79574.2| tRNA pseudouridine synthase [Medicago truncatula]
          Length = 361

 Score =  330 bits (846), Expect = 4e-88
 Identities = 165/261 (63%), Positives = 200/261 (76%)
 Frame = +2

Query: 5   IISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVV 184
           ++ SSRTDAGVHALSNVCHVD+ERISKR+PGEVL P+EP VVR AVNH+L K  GD+AV+
Sbjct: 85  VVCSSRTDAGVHALSNVCHVDIERISKRKPGEVLQPHEPAVVRRAVNHFLQKENGDLAVI 144

Query: 185 DVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVG 364
           DVRC+P+DFHAR++A ERTYFYR+LSGPE LSTFE+ RAWH+ EEL++ A+Q+AC+VLVG
Sbjct: 145 DVRCVPSDFHARYKAQERTYFYRLLSGPETLSTFEKDRAWHIPEELNLPAMQEACKVLVG 204

Query: 365 DHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGI 544
            HDFSSFR +GCQAKSPI++L ELSV EV  +PYFPS ++R+    +  D     S S  
Sbjct: 205 HHDFSSFRASGCQAKSPIRSLDELSVVEVTRSPYFPSVMDRENPINVTDDLHCFHSNSET 264

Query: 545 DVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGT 724
            +     A I +              +R+ HRC V+TARAR+FLYHQVRLLVGVLK  GT
Sbjct: 265 VIPLGSSARIDE---VSASKEDVGFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKDVGT 321

Query: 725 GEITTSDVERILNAKTVTATS 787
           G IT +DVERILNAKTVTATS
Sbjct: 322 GNITVTDVERILNAKTVTATS 342


>ref|XP_007148561.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
           gi|561021784|gb|ESW20555.1| hypothetical protein
           PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 373

 Score =  330 bits (845), Expect = 5e-88
 Identities = 165/258 (63%), Positives = 200/258 (77%)
 Frame = +2

Query: 14  SSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVR 193
           SSRTDAGVHALSNVCHVD++R SKR+PGEVLPP+EP VV  AVNH+L K++ D+ V+DVR
Sbjct: 99  SSRTDAGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFLQKHDSDLTVIDVR 158

Query: 194 CIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHD 373
           C+P+DFHAR++ALERTYFYR+LSGPEPLSTFE+ RAWHV EEL++ A+Q+ACRVLVG HD
Sbjct: 159 CVPSDFHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHD 218

Query: 374 FSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGIDVT 553
           FSSFR  GCQAKSPI+TL EL+V+EV  + +FPS ++R+  + +  DP    S S  D+ 
Sbjct: 219 FSSFRAAGCQAKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIP 278

Query: 554 CKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEI 733
                 I DK+            RR  HRC V+TARARSFLYHQVRLLVGVLKA GTG +
Sbjct: 279 PSSSPCI-DKVTTSSEDVGFGKRRR--HRCLVVTARARSFLYHQVRLLVGVLKAVGTGNL 335

Query: 734 TTSDVERILNAKTVTATS 787
           T  DVERILNAK+VT+ S
Sbjct: 336 TIPDVERILNAKSVTSAS 353


>gb|EYU26478.1| hypothetical protein MIMGU_mgv1a018737mg [Mimulus guttatus]
          Length = 374

 Score =  327 bits (838), Expect = 3e-87
 Identities = 166/261 (63%), Positives = 199/261 (76%)
 Frame = +2

Query: 5   IISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVV 184
           I  SSRTDAGVHALSNVCHVD+ER SKR+PGEVLPP+EP VV++AVNH+L K EGD+ V+
Sbjct: 103 IFCSSRTDAGVHALSNVCHVDIERTSKRKPGEVLPPHEPSVVKSAVNHFLQKNEGDMMVI 162

Query: 185 DVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVG 364
           DV+C+PADFH+R++A ERTYFYR+LSG EPLSTFE+ RAWHV EELDI+++QKAC+VL+G
Sbjct: 163 DVKCVPADFHSRYKAQERTYFYRLLSGMEPLSTFEKNRAWHVPEELDILSMQKACQVLIG 222

Query: 365 DHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGI 544
            HDFSSFR + CQAKSPIKTL ELSVTEVAS  YFPS  ER Q+N   +  +  S+ S  
Sbjct: 223 RHDFSSFRASACQAKSPIKTLDELSVTEVASGTYFPSPAERKQSNYTTEGLVSISNKSET 282

Query: 545 DVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGT 724
           D       S+ + +             RK HRC V+TAR RSFLYHQVRLLVGVLK+ GT
Sbjct: 283 DSV--NGNSVGEAIQGFGI--------RKRHRCIVVTARGRSFLYHQVRLLVGVLKSVGT 332

Query: 725 GEITTSDVERILNAKTVTATS 787
           G++T SDVERIL AK +   S
Sbjct: 333 GDLTVSDVERILKAKDIRTAS 353


>ref|XP_006349329.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Solanum
           tuberosum]
          Length = 389

 Score =  325 bits (834), Expect = 9e-87
 Identities = 161/261 (61%), Positives = 202/261 (77%), Gaps = 2/261 (0%)
 Frame = +2

Query: 5   IISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVV 184
           +  SSRTDAGVHALSNVCHVDVERISKR+PG+VLPP+EP VV+ AVNH+L K EGD+ V+
Sbjct: 106 VFCSSRTDAGVHALSNVCHVDVERISKRKPGDVLPPHEPLVVKRAVNHFLQKNEGDIMVI 165

Query: 185 DVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVG 364
           DVRC+PADFHAR++A ERTYFYR+LSGPE +S+FER RAWHV E LD++A+QKAC +L+G
Sbjct: 166 DVRCVPADFHARYKAQERTYFYRLLSGPESVSSFERDRAWHVPENLDLLAMQKACNILIG 225

Query: 365 DHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVS--SSTS 538
            HDFSSFR   CQA SPI+TL EL+V EV STP+FPS  ER +++ + +DP VS  S T+
Sbjct: 226 RHDFSSFRAAACQANSPIRTLDELNVIEVVSTPFFPSISERLKSSSVMEDPTVSLGSDTN 285

Query: 539 GIDVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAA 718
              ++     + ++KL             R+ HRC+V+TARARSFLYHQVRLLVGVLK+ 
Sbjct: 286 HSQISLN---TNEEKLEGSNGEACQEFGLRRRHRCFVVTARARSFLYHQVRLLVGVLKSV 342

Query: 719 GTGEITTSDVERILNAKTVTA 781
           G G +T  DV+RIL AK++TA
Sbjct: 343 GAGVLTDPDVKRILEAKSITA 363


>ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Populus trichocarpa]
           gi|550312358|gb|ERP48449.1| hypothetical protein
           POPTR_0022s00690g [Populus trichocarpa]
          Length = 370

 Score =  325 bits (833), Expect = 1e-86
 Identities = 170/266 (63%), Positives = 197/266 (74%), Gaps = 5/266 (1%)
 Frame = +2

Query: 5   IISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVV 184
           I  SSRTDAGVHALSNVCHVDVERISKR+PGEVLPP+EP VVR AVNH+L K EGD+ V 
Sbjct: 93  ICLSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPAVVRKAVNHFLQKKEGDIMVT 152

Query: 185 DVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVG 364
           DVR +PA FHAR +A ERTYFYR+L GPE LSTFE+ RAWHV EELD+V++Q+AC+VLVG
Sbjct: 153 DVRSVPAHFHARFKAQERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVG 212

Query: 365 DHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGI 544
            HDFSSFR +GCQAKSP +TL ELSV EV STPYFPS  ER+Q +   + P         
Sbjct: 213 HHDFSSFRASGCQAKSPFRTLEELSVLEVVSTPYFPSITEREQNSSNGEGP------HSF 266

Query: 545 DVTCKV---PASIKD--KLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVL 709
              CK      SI +                 R+ HRCYVITAR+RSFLYHQVRLLVGVL
Sbjct: 267 HNKCKTGLPTGSISNGFMAGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVL 326

Query: 710 KAAGTGEITTSDVERILNAKTVTATS 787
           K+ GTG++T SDVERILNA+++TA S
Sbjct: 327 KSVGTGDLTVSDVERILNARSITAAS 352


>ref|XP_006417534.1| hypothetical protein EUTSA_v10007981mg [Eutrema salsugineum]
           gi|557095305|gb|ESQ35887.1| hypothetical protein
           EUTSA_v10007981mg [Eutrema salsugineum]
          Length = 368

 Score =  325 bits (832), Expect = 2e-86
 Identities = 165/260 (63%), Positives = 196/260 (75%)
 Frame = +2

Query: 2   KIISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAV 181
           KI  SSRTDAGVHALSNVCHVDVERISKR+PGEVLPP+EP VV+ AVNH+L + +GDV V
Sbjct: 101 KIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRNDGDVMV 160

Query: 182 VDVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLV 361
           +DVRC+P+++HAR++A ERTYFYR+LSG +PLS  E+ RAWHV EELD+ ++Q+ACRVLV
Sbjct: 161 IDVRCVPSNYHARYKARERTYFYRLLSGSDPLSILEKDRAWHVPEELDLRSMQEACRVLV 220

Query: 362 GDHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSG 541
           G HDFSSFR  GCQAKSPI++L EL+VTEV STPYFPS  ER  +     DP+  SS + 
Sbjct: 221 GTHDFSSFRAAGCQAKSPIRSLDELNVTEVPSTPYFPSITERTPSYLNNGDPLACSSQAK 280

Query: 542 IDVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAG 721
            + T  V     D               R+ HRCYV+TAR R+FLYHQVRLLV  LK  G
Sbjct: 281 TE-TAGVSTDGGDTFGV-----------RRRHRCYVVTARGRAFLYHQVRLLVAALKCVG 328

Query: 722 TGEITTSDVERILNAKTVTA 781
           TGE+T SDVERIL AKTVTA
Sbjct: 329 TGELTVSDVERILKAKTVTA 348


>ref|XP_007148560.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
           gi|561021783|gb|ESW20554.1| hypothetical protein
           PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 372

 Score =  324 bits (831), Expect = 2e-86
 Identities = 164/258 (63%), Positives = 200/258 (77%)
 Frame = +2

Query: 14  SSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVR 193
           SSRTDAGVHALSNVCHVD++R SKR+PGEVLPP+EP VV  AVNH+L +++ D+ V+DVR
Sbjct: 99  SSRTDAGVHALSNVCHVDIQRTSKRKPGEVLPPHEPAVVGRAVNHFL-QHDSDLTVIDVR 157

Query: 194 CIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHD 373
           C+P+DFHAR++ALERTYFYR+LSGPEPLSTFE+ RAWHV EEL++ A+Q+ACRVLVG HD
Sbjct: 158 CVPSDFHARYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHD 217

Query: 374 FSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGIDVT 553
           FSSFR  GCQAKSPI+TL EL+V+EV  + +FPS ++R+  + +  DP    S S  D+ 
Sbjct: 218 FSSFRAAGCQAKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIP 277

Query: 554 CKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEI 733
                 I DK+            RR  HRC V+TARARSFLYHQVRLLVGVLKA GTG +
Sbjct: 278 PSSSPCI-DKVTTSSEDVGFGKRRR--HRCLVVTARARSFLYHQVRLLVGVLKAVGTGNL 334

Query: 734 TTSDVERILNAKTVTATS 787
           T  DVERILNAK+VT+ S
Sbjct: 335 TIPDVERILNAKSVTSAS 352


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
           gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  324 bits (831), Expect = 2e-86
 Identities = 167/258 (64%), Positives = 195/258 (75%)
 Frame = +2

Query: 14  SSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVVDVR 193
           SSRT AGVHALSNVCHVD++RISKRRPGEVL P+EP VV  AVNH+L K + D+ V+DVR
Sbjct: 96  SSRTVAGVHALSNVCHVDIQRISKRRPGEVLTPHEPAVVGRAVNHFLQKQDSDLMVIDVR 155

Query: 194 CIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVGDHD 373
           C+P+DFHAR +A ER YFYR+LSGPEPLSTFE+ RAWHV EEL + A+Q+ACRVLVG HD
Sbjct: 156 CVPSDFHARFKAQERIYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGFHD 215

Query: 374 FSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGIDVT 553
           FSSFR  GCQAKSPI+TL ELSV EV  +PYFPS ++R+Q N +  D     + S  D+ 
Sbjct: 216 FSSFRAAGCQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNSETDIP 275

Query: 554 CKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGTGEI 733
                SI DK+            RR  HRC V+TARAR+FLYHQVRLLVGVLKA GTG +
Sbjct: 276 PTSNPSI-DKVMASSQDVGFGKRRR--HRCLVVTARARAFLYHQVRLLVGVLKAVGTGNL 332

Query: 734 TTSDVERILNAKTVTATS 787
           T  DVERILNA+TVTA S
Sbjct: 333 TIPDVERILNARTVTAAS 350


>ref|XP_007041229.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
           gi|508705164|gb|EOX97060.1| Pseudouridine synthase
           family protein isoform 2 [Theobroma cacao]
          Length = 345

 Score =  323 bits (828), Expect = 4e-86
 Identities = 161/247 (65%), Positives = 188/247 (76%)
 Frame = +2

Query: 5   IISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVV 184
           I  SSRTDAGVHALSNVCHVDVERISKR+PGEVLPP+EP VVR AVNH+L K EGD+ V+
Sbjct: 94  IFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPSVVRRAVNHFLQKSEGDITVI 153

Query: 185 DVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVG 364
           DVRC+P DFHAR++A ERTYFYR+LSG EPLSTFE+ RAWHV E+LD+ A+Q+AC+VLVG
Sbjct: 154 DVRCVPNDFHARYKAQERTYFYRLLSGSEPLSTFEKERAWHVPEKLDLYAMQEACKVLVG 213

Query: 365 DHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGI 544
            HDFSSFR  GCQAKSPI+TL EL V+E   TPYFPS  E+ Q N   +D    S    I
Sbjct: 214 HHDFSSFRAAGCQAKSPIRTLDELHVSEAPPTPYFPSISEKKQNNSSTEDSHACSREPEI 273

Query: 545 DVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGT 724
           D+     ++  D++            RR+ H CYV+TARARSFLYHQVRLLVGVLK  GT
Sbjct: 274 DLPIDSFSNSDDEVGSNGITDLGFGIRRR-HHCYVVTARARSFLYHQVRLLVGVLKCVGT 332

Query: 725 GEITTSD 745
           GE+TTSD
Sbjct: 333 GELTTSD 339


>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca
           subsp. vesca]
          Length = 350

 Score =  323 bits (828), Expect = 4e-86
 Identities = 166/261 (63%), Positives = 197/261 (75%)
 Frame = +2

Query: 5   IISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVV 184
           I  SSRTDAGVHALSNVCHVD+ERISKR+PGEVLPP+EP VV+ AVNH+L K EGDV VV
Sbjct: 85  IFCSSRTDAGVHALSNVCHVDIERISKRKPGEVLPPHEPIVVQRAVNHFLQKNEGDVMVV 144

Query: 185 DVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVG 364
           DVR +PADFHAR +A ERTYFYR+LSGPEPLSTFE+ RAWH+ EELD++A+Q+AC++LVG
Sbjct: 145 DVRSVPADFHARFKAQERTYFYRLLSGPEPLSTFEKDRAWHIPEELDVLAMQEACKILVG 204

Query: 365 DHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSGI 544
            HDFSSFR  GCQAKSPI+TL EL+V+EV S+P FP+  ER + N +++D      T+  
Sbjct: 205 HHDFSSFRAAGCQAKSPIRTLDELNVSEVVSSPNFPTIAERTR-NLVQKD---IQCTNNP 260

Query: 545 DVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAGT 724
           +  C                       RK HRC V+TARAR+FLYHQVRLLVGVLK  GT
Sbjct: 261 EADCH---------SSFNGGTDQGFGLRKKHRCIVVTARARAFLYHQVRLLVGVLKCVGT 311

Query: 725 GEITTSDVERILNAKTVTATS 787
           G++   DVERILNAKTVTA S
Sbjct: 312 GDLKIPDVERILNAKTVTAAS 332


>ref|NP_172451.2| pseudouridine synthase family protein [Arabidopsis thaliana]
           gi|332190374|gb|AEE28495.1| pseudouridine synthase
           family protein [Arabidopsis thaliana]
          Length = 372

 Score =  323 bits (827), Expect = 6e-86
 Identities = 160/260 (61%), Positives = 198/260 (76%)
 Frame = +2

Query: 2   KIISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAV 181
           KI  SSRTDAGVHALSNVCHVDVERISKR+PGEVLPP+EP VV+ AVNH+L + +GDV V
Sbjct: 97  KIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMV 156

Query: 182 VDVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLV 361
           +DVRC+P+++HAR++A ERTYFYR+LSG +PLS  E+ R WHV EEL++  +Q+ACRVLV
Sbjct: 157 IDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLV 216

Query: 362 GDHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSG 541
           G HDFSSFR  GCQAKSP+++L EL++TEV STPYFPS  ER  +N    DP+  S+   
Sbjct: 217 GSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACSNQPK 276

Query: 542 IDVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAG 721
            + T  V  ++ +              RR+ HRCYV+TAR+R FLYHQVRL+VG LK  G
Sbjct: 277 SE-TAGVTTNVGE---VEGSTEGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVG 332

Query: 722 TGEITTSDVERILNAKTVTA 781
           TGE+T SDVERIL AKTV+A
Sbjct: 333 TGELTVSDVERILEAKTVSA 352


>dbj|BAD44444.1| unnamed protein product [Arabidopsis thaliana]
           gi|51971573|dbj|BAD44451.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 368

 Score =  323 bits (827), Expect = 6e-86
 Identities = 160/260 (61%), Positives = 198/260 (76%)
 Frame = +2

Query: 2   KIISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAV 181
           KI  SSRTDAGVHALSNVCHVDVERISKR+PGEVLPP+EP VV+ AVNH+L + +GDV V
Sbjct: 93  KIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMV 152

Query: 182 VDVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLV 361
           +DVRC+P+++HAR++A ERTYFYR+LSG +PLS  E+ R WHV EEL++  +Q+ACRVLV
Sbjct: 153 IDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLV 212

Query: 362 GDHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSG 541
           G HDFSSFR  GCQAKSP+++L EL++TEV STPYFPS  ER  +N    DP+  S+   
Sbjct: 213 GSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACSNQPK 272

Query: 542 IDVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAG 721
            + T  V  ++ +              RR+ HRCYV+TAR+R FLYHQVRL+VG LK  G
Sbjct: 273 SE-TAGVTTNVGE---VEGSTGGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVG 328

Query: 722 TGEITTSDVERILNAKTVTA 781
           TGE+T SDVERIL AKTV+A
Sbjct: 329 TGELTVSDVERILEAKTVSA 348


>gb|AAT06466.1| At1g09800 [Arabidopsis thaliana]
          Length = 372

 Score =  323 bits (827), Expect = 6e-86
 Identities = 160/260 (61%), Positives = 198/260 (76%)
 Frame = +2

Query: 2   KIISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAV 181
           KI  SSRTDAGVHALSNVCHVDVERISKR+PGEVLPP+EP VV+ AVNH+L + +GDV V
Sbjct: 97  KIFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLPPHEPGVVQRAVNHFLQRKDGDVMV 156

Query: 182 VDVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLV 361
           +DVRC+P+++HAR++A ERTYFYR+LSG +PLS  E+ R WHV EEL++  +Q+ACRVLV
Sbjct: 157 IDVRCVPSNYHARYKAQERTYFYRLLSGSDPLSILEKDRCWHVPEELNLRFMQEACRVLV 216

Query: 362 GDHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANPMEQDPIVSSSTSG 541
           G HDFSSFR  GCQAKSP+++L EL++TEV STPYFPS  ER  +N    DP+  S+   
Sbjct: 217 GSHDFSSFRAAGCQAKSPMRSLDELNITEVPSTPYFPSITERTLSNLNNGDPLACSNQPK 276

Query: 542 IDVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGVLKAAG 721
            + T  V  ++ +              RR+ HRCYV+TAR+R FLYHQVRL+VG LK  G
Sbjct: 277 SE-TAGVTTNVGE---VEGSTGGDSFGRRRRHRCYVVTARSRGFLYHQVRLIVGALKCVG 332

Query: 722 TGEITTSDVERILNAKTVTA 781
           TGE+T SDVERIL AKTV+A
Sbjct: 333 TGELTVSDVERILEAKTVSA 352


>ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [Sorghum bicolor]
           gi|241942657|gb|EES15802.1| hypothetical protein
           SORBIDRAFT_08g005650 [Sorghum bicolor]
          Length = 387

 Score =  322 bits (825), Expect = 1e-85
 Identities = 164/265 (61%), Positives = 197/265 (74%), Gaps = 6/265 (2%)
 Frame = +2

Query: 5   IISSSRTDAGVHALSNVCHVDVERISKRRPGEVLPPYEPEVVRNAVNHYLLKYEGDVAVV 184
           I  SSRTDAGVHALSNVCHVDVERISKR+PGEVL P+EP VV+ AVNH+LLK EGD+ V 
Sbjct: 109 IFCSSRTDAGVHALSNVCHVDVERISKRKPGEVLTPHEPGVVKRAVNHFLLKNEGDIMVT 168

Query: 185 DVRCIPADFHARHRALERTYFYRILSGPEPLSTFERGRAWHVEEELDIVAIQKACRVLVG 364
           DVRC+  DFHAR++ALERTY YR+LSGPE  S FE   AWH+ E+LDI A++KAC +LVG
Sbjct: 169 DVRCVAPDFHARYKALERTYHYRLLSGPESTSVFETNSAWHISEDLDIQAMKKACSILVG 228

Query: 365 DHDFSSFRGTGCQAKSPIKTLTELSVTEVASTPYFPSKVERDQANP------MEQDPIVS 526
            HDFSSFR  GCQA SP++TL ELSVTEV    +FPS VER Q           + P + 
Sbjct: 229 HHDFSSFRAAGCQANSPMRTLDELSVTEVFPFMFFPSSVERSQLESSNGSLVYSRTPDIE 288

Query: 527 SSTSGIDVTCKVPASIKDKLXXXXXXXXXXXXRRKVHRCYVITARARSFLYHQVRLLVGV 706
           SS  G D+ C   +S+K +L            +R  HRC+V+TARARSFLYHQVRL+VG+
Sbjct: 289 SSGKGSDLCC--TSSVKSEL-----ENGEDFGKRSRHRCFVVTARARSFLYHQVRLMVGL 341

Query: 707 LKAAGTGEITTSDVERILNAKTVTA 781
           LK+ GTG++TT+DVERIL+AKTVTA
Sbjct: 342 LKSVGTGDLTTADVERILDAKTVTA 366