BLASTX nr result
ID: Papaver27_contig00018710
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00018710
(1661 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 626 e-176
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 622 e-175
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 620 e-175
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 618 e-174
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 618 e-174
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 610 e-172
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 603 e-170
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 602 e-169
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 602 e-169
ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, part... 598 e-168
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus... 587 e-165
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas... 587 e-165
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 586 e-164
ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arab... 579 e-162
dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Ar... 578 e-162
ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana... 578 e-162
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 578 e-162
ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutr... 577 e-162
ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Caps... 577 e-162
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 576 e-161
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 626 bits (1614), Expect = e-176
Identities = 334/522 (63%), Positives = 388/522 (74%), Gaps = 24/522 (4%)
Frame = -2
Query: 1495 QFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSR 1316
Q +FTK+PY+EDVGPRKI+SI+FSM+S EI KA+EVQVY + +YD +P + LLD R
Sbjct: 2 QQKFTKRPYIEDVGPRKIKSIQFSMLSDSEIAKAAEVQVYQALYYDPKSRPIEGGLLDPR 61
Query: 1315 MGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILL 1136
MGPA +K G C TCHG+FA+CPGHYGYL L LPV+NVGY + IL+ILKCICKSC+RI+L
Sbjct: 62 MGPA-NKSGK-CATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCICKSCSRIIL 119
Query: 1135 SEKERVSYLKKMRNPKAEALQKTATAKAILKSC------KPETCSRCGYINACSEKSRNS 974
EK YLK+MR+PK +AL+K K+I+K C K C RCGY+N +K+
Sbjct: 120 DEKLCKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSKAVKCWRCGYVNGTVKKAVAM 179
Query: 973 YGYYS*PKQKIYG*HR*RMQSS----------------TFWDXRVLGLFKRILDQDCELL 842
G + KI +S+ +VL LFKR+ D DCELL
Sbjct: 180 LGIIH-DRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRMTDLDCELL 238
Query: 841 YLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDLDGKKS 662
YLSDRPEKLIIT+I VPPIPIRPS +DG +SNE+DIT +L IIQ NASLRQ+L +
Sbjct: 239 YLSDRPEKLIITNIAVPPIPIRPSVIMDGSQSNENDITERLKRIIQANASLRQELVETNA 298
Query: 661 TSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRV 482
+CLG WE+LQVEVAQYINS+VRGVP SM Q SKPL GFVQR+KGK GRFRGNL GKRV
Sbjct: 299 AFKCLGGWEMLQVEVAQYINSDVRGVPFSM-QVSKPLSGFVQRIKGKHGRFRGNLSGKRV 357
Query: 481 EYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSI 302
EYT RTVISPDPNLKITEV IPI +A+ILTYPE VS HNIEKLR+CV NG KYPGA+ +
Sbjct: 358 EYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPSKYPGARMV 417
Query: 301 -ISAGSVWIL-NRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMP 128
GS +L RK A LKFG +V+RHLEDGD+VLFNRQ SLHRMSIMCHRA+IMP
Sbjct: 418 RYPDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMP 477
Query: 127 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 478 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 519
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 622 bits (1604), Expect = e-175
Identities = 324/513 (63%), Positives = 383/513 (74%), Gaps = 18/513 (3%)
Frame = -2
Query: 1486 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1307
FTKQPY+EDVGPRKI+S++F+ SG EI K +EVQVY +YD RKP LLD RMGP
Sbjct: 11 FTKQPYIEDVGPRKIKSMQFTTFSGAEISKLAEVQVYKGLYYDTTRKPIDGGLLDPRMGP 70
Query: 1306 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1127
A G C TCH +F +CPGHYGY++L LPVFNVGYF IL ILKCICKSC+RILL EK
Sbjct: 71 ANK--GCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKCICKSCSRILLEEK 128
Query: 1126 ERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKSRNSYG 968
+L+KMRNPK EAL+K K I+K C K CSRCGY+N +K+ + G
Sbjct: 129 LFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRCSRCGYLNGSVKKAVSMLG 188
Query: 967 ---YYS*PKQKIYG*HR*RMQSSTFWD----XRVLGLFKRILDQDCELLYLSDRPEKLII 809
Y + K R + D RVL LF+R+ D+DCELL+LS+RPEKLII
Sbjct: 189 ILHYRARSKDAGVVSEDLRAPYNVSNDILNPFRVLCLFQRMSDEDCELLFLSNRPEKLII 248
Query: 808 TDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDLDGKKSTSQCLGDWELL 629
T++LVPPI IRPS +DG +SNE+DIT +L IIQ NAS+ Q+L S ++CL W++L
Sbjct: 249 TNVLVPPIAIRPSVIMDGSQSNENDITERLKRIIQQNASVSQELSTSNSQAKCLESWDML 308
Query: 628 QVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEYTARTVISPD 449
Q EVAQ INS+VRG+P S MQ SKPL GFVQRLKGKQGRFRGNLCGKRVE+T RTVISPD
Sbjct: 309 QSEVAQLINSDVRGIPFS-MQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFTGRTVISPD 367
Query: 448 PNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII----SAGSVW 281
PNLKITEV +PI +A+ILTYPE V++HNIEKLR+CV NG KYPGA+ + S S+
Sbjct: 368 PNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLM 427
Query: 280 ILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWRTLRFNES 101
I R+R +D LK+G+IVERHLEDGDVVLFNRQ SLHRMSIMCHR ++MPWRTLRFNES
Sbjct: 428 ISGRKRLADE--LKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNES 485
Query: 100 VCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
VCNPYNADFDGDEMNMHVPQTEEARTEA++LMG
Sbjct: 486 VCNPYNADFDGDEMNMHVPQTEEARTEAILLMG 518
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 620 bits (1598), Expect = e-175
Identities = 333/529 (62%), Positives = 381/529 (72%), Gaps = 22/529 (4%)
Frame = -2
Query: 1522 TARQSEAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKP 1343
T + + FTKQPY+EDVGPRKI+SI+FSMMS EIMKA+EVQVY +Y NR P
Sbjct: 2 TQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVP 61
Query: 1342 KKNALLDSRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCI 1163
+ LLD RMGPA C TCHG F+NCPGHYGYL L LPV+NVGY + IL+ILKCI
Sbjct: 62 IEGGLLDPRMGPANKSC--TCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKCI 119
Query: 1162 CKSCARILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC-----KPETCSRCGYINA 998
CK C+R+LL EK YLKKMRNPK EAL+KT K+I+K C K C RCGYIN
Sbjct: 120 CKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPRCGYING 179
Query: 997 CSEKSRNSYGYYS*PKQKIYG*HR*RMQSSTFWDX---------------RVLGLFKRIL 863
+K+ G + K+ + + T VL LFKR+
Sbjct: 180 MVKKAVAVLGIIH-DRSKVTESLQEFASAITHTKESKAAVNVATYILNPVNVLFLFKRMT 238
Query: 862 DQDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQ 683
D DCE+LYLS+RPEKLIIT+I VPPI IRPS +DG +SNE+DIT +L IIQTNASL+Q
Sbjct: 239 DTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGSQSNENDITERLKRIIQTNASLQQ 298
Query: 682 DLDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRG 503
+L S + L WE LQVEVAQYINS+VRGVP SM Q ++PL GFVQRLKGKQGRFRG
Sbjct: 299 ELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSM-QVARPLSGFVQRLKGKQGRFRG 357
Query: 502 NLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYK 323
NL GKRVEYT RTVISPDPNLKITEV IPI +A+ILTYPE VS HNIEKLR+C+ NG K
Sbjct: 358 NLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPDK 417
Query: 322 YPGAKSI-ISAGSVWIL-NRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMC 149
YPGA+ I G+ +L + R A LK G IV+RHLEDGDVVLFNRQ SLHRMSIMC
Sbjct: 418 YPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIMC 477
Query: 148 HRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
HRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL+LMG
Sbjct: 478 HRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMG 526
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 618 bits (1594), Expect = e-174
Identities = 327/522 (62%), Positives = 393/522 (75%), Gaps = 26/522 (4%)
Frame = -2
Query: 1489 QFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMG 1310
QFTK+PY+EDVGPRKI+SI+F++ S EI KA+EVQV+ +YD NRKP +N LLD RMG
Sbjct: 6 QFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRMG 65
Query: 1309 PAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSE 1130
PA +K G C TC G+F +CPGH GYL L LPV+NVGY + I++ILKCICKSC+R+LL E
Sbjct: 66 PA-NKNGT-CATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDE 123
Query: 1129 KERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKSRNSY 971
K YLKKMR+ K EAL+K K I++ C K CSRCGY+N +K+ +
Sbjct: 124 KASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVL 183
Query: 970 GYYS*PKQKIYG*---------HR*RMQSS-----TFWDXRVLGLFKRILDQDCELLYLS 833
G + G H ++S +VL LFKR++D+DC+LL L+
Sbjct: 184 GIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243
Query: 832 DRPEKLIITDILVPPIPIRPSSFVDGG-RSNEDDITSKLNTIIQTNASLRQDLDGKKSTS 656
+RPEKL++T+I VPPI IRPS F+DGG +SNE+D+T +L IIQ NASL Q+L STS
Sbjct: 244 ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303
Query: 655 QCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEY 476
+CL W+ LQ+EVAQYINS+VRGVPL+M Q+++PL GFVQRLKGKQGRFRGNL GKRVEY
Sbjct: 304 KCLAGWDYLQIEVAQYINSDVRGVPLAM-QAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362
Query: 475 TARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII- 299
T RTVISPDPNLKITEV IPIL+A+IL+YPE VS HNIEKLR+C++NG +KYPGAK I
Sbjct: 363 TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422
Query: 298 ---SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMP 128
S S+ R+R +D LK+G IVERHLEDGDVVLFNRQ SLHRMSIMCHRA+IMP
Sbjct: 423 PDGSMRSLMFSGRKRFADE--LKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMP 480
Query: 127 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 481 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 522
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 618 bits (1594), Expect = e-174
Identities = 327/522 (62%), Positives = 393/522 (75%), Gaps = 26/522 (4%)
Frame = -2
Query: 1489 QFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMG 1310
QFTK+PY+EDVGPRKI+SI+F++ S EI KA+EVQV+ +YD NRKP +N LLD RMG
Sbjct: 6 QFTKEPYIEDVGPRKIESIRFALFSESEISKAAEVQVWRGVYYDANRKPIENGLLDPRMG 65
Query: 1309 PAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSE 1130
PA +K G C TC G+F +CPGH GYL L LPV+NVGY + I++ILKCICKSC+R+LL E
Sbjct: 66 PA-NKNGT-CATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKCICKSCSRVLLDE 123
Query: 1129 KERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKSRNSY 971
K YLKKMR+ K EAL+K K I++ C K CSRCGY+N +K+ +
Sbjct: 124 KASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGYMNGIVKKAVSVL 183
Query: 970 GYYS*PKQKIYG*---------HR*RMQSS-----TFWDXRVLGLFKRILDQDCELLYLS 833
G + G H ++S +VL LFKR++D+DC+LL L+
Sbjct: 184 GIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKRMMDEDCDLLNLA 243
Query: 832 DRPEKLIITDILVPPIPIRPSSFVDGG-RSNEDDITSKLNTIIQTNASLRQDLDGKKSTS 656
+RPEKL++T+I VPPI IRPS F+DGG +SNE+D+T +L IIQ NASL Q+L STS
Sbjct: 244 ERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTS 303
Query: 655 QCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEY 476
+CL W+ LQ+EVAQYINS+VRGVPL+M Q+++PL GFVQRLKGKQGRFRGNL GKRVEY
Sbjct: 304 KCLAGWDYLQIEVAQYINSDVRGVPLAM-QAARPLSGFVQRLKGKQGRFRGNLSGKRVEY 362
Query: 475 TARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII- 299
T RTVISPDPNLKITEV IPIL+A+IL+YPE VS HNIEKLR+C++NG +KYPGAK I
Sbjct: 363 TGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRY 422
Query: 298 ---SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMP 128
S S+ R+R +D LK+G IVERHLEDGDVVLFNRQ SLHRMSIMCHRA+IMP
Sbjct: 423 PDGSMRSLMFSGRKRFADE--LKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMP 480
Query: 127 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 481 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 522
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 610 bits (1572), Expect = e-172
Identities = 333/544 (61%), Positives = 381/544 (70%), Gaps = 37/544 (6%)
Frame = -2
Query: 1522 TARQSEAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKP 1343
T + + FTKQPY+EDVGPRKI+SI+FSMMS EIMKA+EVQVY +Y NR P
Sbjct: 2 TQQLQQKSQSIAFTKQPYIEDVGPRKIESIQFSMMSDSEIMKAAEVQVYKGQYYSSNRVP 61
Query: 1342 KKNALLDSRM---------------GPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVF 1208
+ LLD RM GPA C TCHG F+NCPGHYGYL L LPV+
Sbjct: 62 IEGGLLDPRMEKIIFLQRLFFHGFQGPANKSC--TCATCHGGFSNCPGHYGYLTLALPVY 119
Query: 1207 NVGYFNAILNILKCICKSCARILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC--- 1037
NVGY + IL+ILKCICK C+R+LL EK YLKKMRNPK EAL+KT K+I+K C
Sbjct: 120 NVGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTM 179
Query: 1036 --KPETCSRCGYINACSEKSRNSYGYYS*PKQKIYG*HR*RMQSSTFWDX---------- 893
K C RCGYIN +K+ G + K+ + + T
Sbjct: 180 ASKAVKCPRCGYINGMVKKAVAVLGIIH-DRSKVTESLQEFASAITHTKESKAAVNVATY 238
Query: 892 -----RVLGLFKRILDQDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDIT 728
VL LFKR+ D DCE+LYLS+RPEKLIIT+I VPPI IRPS +DG +SNE+DIT
Sbjct: 239 ILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDGSQSNENDIT 298
Query: 727 SKLNTIIQTNASLRQDLDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLR 548
+L IIQTNASL+Q+L S + L WE LQVEVAQYINS+VRGVP SM Q ++PL
Sbjct: 299 ERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSM-QVARPLS 357
Query: 547 GFVQRLKGKQGRFRGNLCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQH 368
GFVQRLKGKQGRFRGNL GKRVEYT RTVISPDPNLKITEV IPI +A+ILTYPE VS H
Sbjct: 358 GFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDH 417
Query: 367 NIEKLRKCVVNGAYKYPGAKSI-ISAGSVWIL-NRRRKSDAYGLKFGDIVERHLEDGDVV 194
NIEKLR+C+ NG KYPGA+ I G+ +L + R A LK G IV+RHLEDGDVV
Sbjct: 418 NIEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVV 477
Query: 193 LFNRQSSLHRMSIMCHRAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL 14
LFNRQ SLHRMSIMCHRA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL
Sbjct: 478 LFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAL 537
Query: 13 MLMG 2
+LMG
Sbjct: 538 LLMG 541
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 603 bits (1555), Expect = e-170
Identities = 324/522 (62%), Positives = 380/522 (72%), Gaps = 19/522 (3%)
Frame = -2
Query: 1510 SEAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNA 1331
+ AQ Q TKQPY+EDVGPRKI+SIKFS+ S EI+K +EV+VY +Y+ +KP +N
Sbjct: 2 NRAQESLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKLAEVEVYLGLYYESTKKPIQNG 61
Query: 1330 LLDSRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSC 1151
LLD RMGP +K G CETCHG+F CPGHYGYL L LPV+NVGY +++ILKCICK C
Sbjct: 62 LLDPRMGPP-NKSGC-CETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCC 119
Query: 1150 ARILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACS 992
+ ILL +KER LKKMRNP+ E L+K+ K ++K C K TCS+CGY+N
Sbjct: 120 SSILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTATCSKCGYMNGMV 179
Query: 991 EKSR----NSYGYYS*PKQKIYG*HR*RMQSSTFWDXR-----VLGLFKRILDQDCELLY 839
+K + + G + + + +++S V LFK + D+DCELLY
Sbjct: 180 KKLQLKITHEQGNRILDEINVAISDKRELRASVSVPPEIDPKVVYSLFKNMSDEDCELLY 239
Query: 838 LSDRPEKLIITDILVPPIPIRPSSFVDGG-RSNEDDITSKLNTIIQTNASLRQDLDGKKS 662
LSDRPEKL++T I VPPI IRPS FVDGG +SNE+DIT +L IIQ NASL Q++ S
Sbjct: 240 LSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDS-S 298
Query: 661 TSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRV 482
+ L W LQ+EVAQYINS+VRGVPL M Q +PL GF QRLKGKQGRFRGNL GKRV
Sbjct: 299 PVKSLNQWIDLQMEVAQYINSDVRGVPLQM-QPPRPLSGFTQRLKGKQGRFRGNLSGKRV 357
Query: 481 EYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSI 302
EYT RTVISPDPNLKITEV IPIL+AQILTYPE VSQHNIEKLR+CV NG KYPGAK I
Sbjct: 358 EYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFI 417
Query: 301 I--SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMP 128
+ ++ RK A LKFG IV+RHLEDGD+VLFNRQ SLHRMSIM HRA+IMP
Sbjct: 418 RHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMP 477
Query: 127 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 478 WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 519
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Solanum tuberosum]
Length = 1243
Score = 602 bits (1553), Expect = e-169
Identities = 324/519 (62%), Positives = 383/519 (73%), Gaps = 19/519 (3%)
Frame = -2
Query: 1501 QAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLD 1322
Q Q TKQPY+EDVGPRKI+SIKFS+ S EI+K++EV+VY +Y+ +KP +N LLD
Sbjct: 5 QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64
Query: 1321 SRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARI 1142
RMGP +K G CETCHG+F CPGHYGYL L LPV+NVGY +++ILKCICK C+ I
Sbjct: 65 PRMGPP-NKNGC-CETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSI 122
Query: 1141 LLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKS 983
LL +KER LKKMRNP+ E L+K+ K ++K C K TCS+CGY+N +K
Sbjct: 123 LLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSKCGYMNGMVKKL 182
Query: 982 R----NSYGYYS*PKQKIYG*HR*RMQSSTF----WDXRVL-GLFKRILDQDCELLYLSD 830
+ + G + + + +++S D +V+ LFK + D+DCELLYLSD
Sbjct: 183 QLKITHEQGNRILDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYLSD 242
Query: 829 RPEKLIITDILVPPIPIRPSSFVDGG-RSNEDDITSKLNTIIQTNASLRQDLDGKKSTSQ 653
RPEKL++T I VPPI IRPS FVDGG +SNE+DIT +L IIQ NASL Q++ S +
Sbjct: 243 RPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDS-SPVK 301
Query: 652 CLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEYT 473
L W LQ+EVAQYINS+VRGVPL M Q+ +PL GF QRLKGKQGRFRGNL GKRVEYT
Sbjct: 302 SLNLWIDLQMEVAQYINSDVRGVPLHM-QAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYT 360
Query: 472 ARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII-- 299
RTVISPDPNLKITEV IPIL+AQILTYPE VSQHNIEKLR+CV NG KYPGAK I
Sbjct: 361 GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP 420
Query: 298 SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWRT 119
+ ++ RK A LKFG IV+RHLEDGD+VLFNRQ SLHRMSIM HRA+IMPWRT
Sbjct: 421 DGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 480
Query: 118 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 481 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 519
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 602 bits (1553), Expect = e-169
Identities = 324/519 (62%), Positives = 383/519 (73%), Gaps = 19/519 (3%)
Frame = -2
Query: 1501 QAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLD 1322
Q Q TKQPY+EDVGPRKI+SIKFS+ S EI+K++EV+VY +Y+ +KP +N LLD
Sbjct: 5 QNSLQVTKQPYIEDVGPRKIKSIKFSLFSESEILKSAEVEVYLGLYYESTKKPIQNGLLD 64
Query: 1321 SRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARI 1142
RMGP +K G CETCHG+F CPGHYGYL L LPV+NVGY +++ILKCICK C+ I
Sbjct: 65 PRMGPP-NKNGC-CETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKCICKCCSSI 122
Query: 1141 LLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKS 983
LL +KER LKKMRNP+ E L+K+ K ++K C K TCS+CGY+N +K
Sbjct: 123 LLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSKCGYMNGMVKKL 182
Query: 982 R----NSYGYYS*PKQKIYG*HR*RMQSSTF----WDXRVL-GLFKRILDQDCELLYLSD 830
+ + G + + + +++S D +V+ LFK + D+DCELLYLSD
Sbjct: 183 QLKITHEQGNRILDEINVAISDKRELRASVSVPPELDPKVVYSLFKNMSDEDCELLYLSD 242
Query: 829 RPEKLIITDILVPPIPIRPSSFVDGG-RSNEDDITSKLNTIIQTNASLRQDLDGKKSTSQ 653
RPEKL++T I VPPI IRPS FVDGG +SNE+DIT +L IIQ NASL Q++ S +
Sbjct: 243 RPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDS-SPVK 301
Query: 652 CLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEYT 473
L W LQ+EVAQYINS+VRGVPL M Q+ +PL GF QRLKGKQGRFRGNL GKRVEYT
Sbjct: 302 SLNLWIDLQMEVAQYINSDVRGVPLHM-QAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYT 360
Query: 472 ARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII-- 299
RTVISPDPNLKITEV IPIL+AQILTYPE VSQHNIEKLR+CV NG KYPGAK I
Sbjct: 361 GRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHP 420
Query: 298 SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWRT 119
+ ++ RK A LKFG IV+RHLEDGD+VLFNRQ SLHRMSIM HRA+IMPWRT
Sbjct: 421 DGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRT 480
Query: 118 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 481 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 519
>ref|XP_007208145.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
gi|462403787|gb|EMJ09344.1| hypothetical protein
PRUPE_ppa024521mg, partial [Prunus persica]
Length = 867
Score = 598 bits (1541), Expect = e-168
Identities = 312/518 (60%), Positives = 374/518 (72%), Gaps = 23/518 (4%)
Frame = -2
Query: 1486 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1307
FTKQP++ED G RKI+ +FS MS EI+ +E Q+Y +YD N+KP + LLD R+GP
Sbjct: 14 FTKQPFIEDEGHRKIEKWQFSAMSDTEIVNMAETQIYKCNYYDPNQKPIEGGLLDPRLGP 73
Query: 1306 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1127
A G C TC +CPGH+G+L L LPV NVGY + +++ILKCICK C+ ILL E
Sbjct: 74 ANKSSGE-CATCGAVMKDCPGHFGFLVLALPVLNVGYLSTVVDILKCICKLCSGILLEEG 132
Query: 1126 ERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKSRNSYG 968
R +LKKMR+PK E L+KT K I+K C +P CS+CG+IN +K+ G
Sbjct: 133 MRNDFLKKMRSPKMEPLRKTELMKKIVKKCNNLTTNYRPVKCSKCGFINGSVKKAVGVLG 192
Query: 967 YYS*PKQKIYG*---------HR*RMQSS------TFWDXRVLGLFKRILDQDCELLYLS 833
+ K+ G H ++S R+ LFKR++D+DCELL LS
Sbjct: 193 IIH-DRSKLNGVMDDFRTTLSHTKESKASFNVATHMLNPARIYSLFKRMVDEDCELLNLS 251
Query: 832 DRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDLDGKKSTSQ 653
+RP+ LII +I VPPI IRPS VD SNE+DIT +L IIQ+NA LR+DL KS +
Sbjct: 252 NRPQNLIIKNIAVPPIAIRPSVIVDRSLSNENDITERLKRIIQSNAILRRDLLEAKSAPK 311
Query: 652 CLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEYT 473
CL W++LQVEVAQYINS++RGVP SM Q++KPL GFVQRLKGK GRFRGNL GKRVEYT
Sbjct: 312 CLASWDILQVEVAQYINSDIRGVPFSM-QTAKPLSGFVQRLKGKGGRFRGNLSGKRVEYT 370
Query: 472 ARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSIISA 293
RTVISPDPNLKITEVG+PI +AQILTYPE VS HNIEKLR+CV NG KYPGA+ + +
Sbjct: 371 GRTVISPDPNLKITEVGVPIKMAQILTYPERVSHHNIEKLRQCVSNGPDKYPGARMLRNP 430
Query: 292 -GSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWRTL 116
G+ W L RK+ A GLK+GDIVERHLEDGD+VLFNRQ SLHRMSIMCHRAK+MPWRTL
Sbjct: 431 DGTEWSLKVNRKNAADGLKYGDIVERHLEDGDIVLFNRQPSLHRMSIMCHRAKVMPWRTL 490
Query: 115 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
RFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+MLMG
Sbjct: 491 RFNESVCNPYNADFDGDEMNMHVPQTEEARTEAVMLMG 528
>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
Length = 1394
Score = 587 bits (1513), Expect = e-165
Identities = 307/520 (59%), Positives = 373/520 (71%), Gaps = 24/520 (4%)
Frame = -2
Query: 1489 QFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMG 1310
QFTK+PYVEDVGPR+I+SI+FS S E++KA EV+V +YD+NRKP N LLD RMG
Sbjct: 8 QFTKRPYVEDVGPRRIESIQFSTFSAAEVLKAGEVEVNKIAYYDENRKPIDNGLLDQRMG 67
Query: 1309 PAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSE 1130
PA I+C+TC G F +CPGHYGYL L LPV+NVG+F I++ILKCICK+C+R+LL++
Sbjct: 68 PANKS--ILCKTCGGKFVDCPGHYGYLPLALPVYNVGFFLTIIDILKCICKNCSRVLLAD 125
Query: 1129 KERVSYLKKMRNPKAEALQKTATAKAILKSC-------KPETCSRCGYINACSEKSRNSY 971
K+ +LK+MRNPK E L+K K ++K C + CSRCGYIN +K++
Sbjct: 126 KDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAGSKRAVKCSRCGYINGMVKKAKEPL 185
Query: 970 GYYS*PKQKIYG*HR*RMQS--------------STFWDXRVLGLFKRILDQDCELLYLS 833
+ + R + ST L + +LD+DCELLYL
Sbjct: 186 KIQHDRAKVVDNCLDERRSALAHTKDIKGNPVVISTIDPKTAYHLLENMLDEDCELLYLH 245
Query: 832 DRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDLDGKKSTSQ 653
DRPEKLI+T+ILVPPI IRPS F SNE+DITS+L IIQ NA++ Q++ + S SQ
Sbjct: 246 DRPEKLIVTNILVPPIAIRPSVFSTRAMSNENDITSRLKQIIQINAAVLQEMSDQSSQSQ 305
Query: 652 CL-GDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEY 476
L +W+ LQVEVAQYINS+VR VPL +++KPL GFVQRLKGKQGRFRGNL GKRVE+
Sbjct: 306 SLTNNWDSLQVEVAQYINSDVR-VPLQYSENTKPLSGFVQRLKGKQGRFRGNLSGKRVEF 364
Query: 475 TARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII- 299
T RTVISPDPNLKI EV +PIL+AQIL+YPE VS HNIE+LR+CV NG KYPGAK I
Sbjct: 365 TGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRNGPTKYPGAKFIKH 424
Query: 298 -SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWR 122
+ + + R A LK+G IV RHL+DGD++LFNRQ SLHRMSIM HRA+IMPWR
Sbjct: 425 PDGTEISLTGKIRHRAADDLKYGYIVCRHLQDGDIILFNRQPSLHRMSIMSHRARIMPWR 484
Query: 121 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG
Sbjct: 485 TLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 524
>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
gi|561005141|gb|ESW04135.1| hypothetical protein
PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 587 bits (1513), Expect = e-165
Identities = 311/516 (60%), Positives = 371/516 (71%), Gaps = 21/516 (4%)
Frame = -2
Query: 1486 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1307
FTK+P++ED GPRKI+++KFSM+S EI K EVQV+ +YD +KP LLD RMGP
Sbjct: 11 FTKEPFMEDAGPRKIKNMKFSMLSDSEISKLGEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70
Query: 1306 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1127
A +G C TCHG+F +CPGHYGYL+L LPVFNVGY +I+ ILKCICK CARILL E
Sbjct: 71 ANKSLG--CATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKCICKGCARILLDED 128
Query: 1126 ERVSYLKKMRNPKAEALQKTATAKA-ILKSC-KPETCSRCGYINA--------------C 995
R +LKKMR+ K L K K I+K C K C RCGYIN C
Sbjct: 129 TRKKHLKKMRSSKKSELDKMDFVKVRIIKDCSKVVNCPRCGYINGSVKKLPASLIIMHDC 188
Query: 994 SEKSRNSYGYYS*PKQKIYG*HR*RMQSSTFWDX-RVLGLFKRILDQDCELLYLSDRPEK 818
S+ N +I S+ + +VL LF+++LD+DCELLY+++RPEK
Sbjct: 189 SKCKNNIVEELESTLSRIKDSKATANVSNRILNPFQVLSLFRKMLDEDCELLYVAERPEK 248
Query: 817 LIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDLDGKKSTSQCLGDW 638
LIIT+I+VPPI IRPS +D SNE+DIT +L IIQ NA LRQ+L +S+ L W
Sbjct: 249 LIITNIVVPPIAIRPSVVMDESLSNENDITERLKNIIQANAVLRQELQESSVSSKFLDGW 308
Query: 637 ELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEYTARTVI 458
E+LQ EVAQ+INSEVRG+P MQS+K L GFVQRLKGK GRFRGNL GKRVEYT RTVI
Sbjct: 309 EILQNEVAQFINSEVRGIPF-YMQSTKQLAGFVQRLKGKHGRFRGNLSGKRVEYTGRTVI 367
Query: 457 SPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSIISAG---- 290
SPDPNLKI+EV IPIL+A ILTYPE V+ HNIEKLR+CV NG KYPGA+ + G
Sbjct: 368 SPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRRDGGHSW 427
Query: 289 SVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWRTLRF 110
S+ +L R+R +D L+ GDIV+RHLEDGD+VLFNRQ SLHRMSIM HRA+IMPWRTLRF
Sbjct: 428 SLKVLCRKRAADE--LRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRF 485
Query: 109 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
NESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMG
Sbjct: 486 NESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMG 521
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 586 bits (1510), Expect = e-164
Identities = 305/519 (58%), Positives = 368/519 (70%), Gaps = 23/519 (4%)
Frame = -2
Query: 1489 QFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMG 1310
Q TKQPY+EDVG R+I+SI FS +SG E++K + V+VY +YD N+KP N LLD RMG
Sbjct: 2 QSTKQPYIEDVGSRRIESINFSTLSGSEVLKTAVVEVYKGSYYDANKKPVSNGLLDMRMG 61
Query: 1309 PAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSE 1130
P + +C TCHG+F CPGHYGYL L LPV+NVGY + I++ILKCICK+C+R+LL E
Sbjct: 62 PPNKRS--VCGTCHGNFQECPGHYGYLALALPVYNVGYLSNIVDILKCICKNCSRVLLEE 119
Query: 1129 KERVSYLKKMRNPKAEALQKTATAKAILKSCKPET-------CSRCGYINACSEKSRNSY 971
KE +L+KMRNP+ E L+KT K I+K C + C RCG+IN +++
Sbjct: 120 KEHHGFLRKMRNPRLEPLKKTDLFKKIVKRCNSKAGSNKLAKCPRCGHINGMVKRAPYKV 179
Query: 970 GYYS*PKQKIYG*HR*RMQS-------------STFWDXRVLGLFKRILDQDCELLYLSD 830
Y + ++ QS ST V L + +LD+DCELLY+ D
Sbjct: 180 MY---DRGRVIDSQMEECQSAGPSMKASRGNTTSTLDALFVFRLLRNMLDEDCELLYIHD 236
Query: 829 RPEKLIITDILVPPIPIRPSSFVDGG-RSNEDDITSKLNTIIQTNASLRQDLDGKKSTSQ 653
RPEKL++T+ILVPP IRPS FVDGG +SNE+DIT +L II+ NA+L Q L +
Sbjct: 237 RPEKLMVTNILVPPTAIRPSVFVDGGTQSNENDITERLKYIIEANANLSQQLLETNIYKK 296
Query: 652 CLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEYT 473
+ WE LQ+EVAQYINS+ RG+PL SSKPL GFVQRLKGKQGRFRGNL GKRVEYT
Sbjct: 297 GVTSWETLQIEVAQYINSDTRGLPLYGGGSSKPLSGFVQRLKGKQGRFRGNLSGKRVEYT 356
Query: 472 ARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSIISA 293
RTVISPDPNLKITEV +PIL+A+ILTYPE VS NI +LR+CV G +YPGAK I
Sbjct: 357 GRTVISPDPNLKITEVAVPILMAKILTYPERVSHQNIAELRECVRRGPNEYPGAKFIRQP 416
Query: 292 GSVWILNR--RRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWRT 119
I R RK A LK+GDIV+RHL+DGD+VLFNRQ SLHRMSIMCHRA+IMPWRT
Sbjct: 417 DGTEISLRFSSRKIHADALKYGDIVDRHLKDGDIVLFNRQPSLHRMSIMCHRARIMPWRT 476
Query: 118 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
LRFNESVCNPYNADFDGDEMNMHVPQTEE+R EA+MLMG
Sbjct: 477 LRFNESVCNPYNADFDGDEMNMHVPQTEESRAEAIMLMG 515
>ref|XP_002864665.1| hypothetical protein ARALYDRAFT_496142 [Arabidopsis lyrata subsp.
lyrata] gi|297310500|gb|EFH40924.1| hypothetical protein
ARALYDRAFT_496142 [Arabidopsis lyrata subsp. lyrata]
Length = 1376
Score = 579 bits (1493), Expect = e-162
Identities = 306/527 (58%), Positives = 371/527 (70%), Gaps = 25/527 (4%)
Frame = -2
Query: 1507 EAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNAL 1328
E + + +FTKQPY+EDVGP KI+SI FS++S E+MKA+EVQV+ + +Y+ N KP +N L
Sbjct: 2 ETKMEIEFTKQPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWKNNYYETNLKPYENGL 61
Query: 1327 LDSRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCA 1148
LD+RMGP K IC TC G+F NCPGHYGYL L LPV+NVG+FN IL+ILKCICK C+
Sbjct: 62 LDARMGPPNKKS--ICTTCDGNFQNCPGHYGYLKLDLPVYNVGFFNFILDILKCICKRCS 119
Query: 1147 RILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSCKPE------TCSRCGYINACSEK 986
+LL EK +L+KMRNPK E L+KT AKA++K C TC +CGY+N +K
Sbjct: 120 NMLLDEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKK 179
Query: 985 SRNSYGY-YS*PKQKIYG*HR*RMQSSTFWDXR----------------VLGLFKRILDQ 857
G S + KI+G +S+ VLGLFK + D+
Sbjct: 180 IAAQMGIGISHDRSKIHGGEVDECKSAISHTKESTRAINPLTYVLDPNLVLGLFKGMSDK 239
Query: 856 DCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDL 677
DCELLY++ RPE LI T +LVPP+ IRPS + G RSNE+DIT +L IIQ NA L + L
Sbjct: 240 DCELLYIAHRPENLITTCMLVPPLSIRPSVMIGGTRSNENDITERLKLIIQNNACLHRIL 299
Query: 676 DGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNL 497
++ + + W+ +Q EVA+YINSEVRGV PL G +QRLKGKQGRFR NL
Sbjct: 300 SQPTTSPKNMQVWDTVQSEVAKYINSEVRGV--QNQPEKTPLSGLLQRLKGKQGRFRANL 357
Query: 496 CGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYP 317
GKRVEYT RTVISPDPNLKITEVGIPIL+A+ILT+PE VS+HNIEKLR+CV NG KYP
Sbjct: 358 SGKRVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYP 417
Query: 316 GAKSI--ISAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHR 143
GA+++ S ++ RK A L G IV+RHLE+GD VLFNRQ SLHRMSIMCHR
Sbjct: 418 GARNVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHR 477
Query: 142 AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
A+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMG
Sbjct: 478 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMG 524
>dbj|BAA96933.1| DNA-directed RNA polymerase II largest chain [Arabidopsis thaliana]
Length = 1383
Score = 578 bits (1491), Expect = e-162
Identities = 305/527 (57%), Positives = 375/527 (71%), Gaps = 25/527 (4%)
Frame = -2
Query: 1507 EAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNAL 1328
E + + +FTK+PY+EDVGP KI+SI FS++S E+MKA+EVQV++ G YD + KP +N L
Sbjct: 2 ETKMEIEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGL 61
Query: 1327 LDSRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCA 1148
LD RMGP K IC TC G+F NCPGHYGYL L LPV+NVGYFN IL+ILKCICK C+
Sbjct: 62 LDPRMGPPNKKS--ICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCS 119
Query: 1147 RILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSCKPE------TCSRCGYINACSEK 986
+LL EK +L+KMRNP+ E L+KT AKA++K C TC +CGY+N +K
Sbjct: 120 NMLLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKK 179
Query: 985 SRNSYGY-YS*PKQKIYG*HR*RMQSSTFWDXR----------------VLGLFKRILDQ 857
+G S + KI+G +S+ + VLGLFKR+ D+
Sbjct: 180 IAAQFGIGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDK 239
Query: 856 DCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDL 677
DCELLY++ RPE LIIT +LVPP+ IRPS + G +SNE+D+T++L II NASL + L
Sbjct: 240 DCELLYIAYRPENLIITCMLVPPLSIRPSVMIGGIQSNENDLTARLKQIILGNASLHKIL 299
Query: 676 DGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNL 497
S+ + + W+ +Q+EVA+YINSEVRG PL G +QRLKGK GRFR NL
Sbjct: 300 SQPTSSPKNMQVWDTVQIEVARYINSEVRG--CQNQPEEHPLSGILQRLKGKGGRFRANL 357
Query: 496 CGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYP 317
GKRVE+T RTVISPDPNLKITEVGIPIL+AQILT+PE VS+HNIEKLR+CV NG KYP
Sbjct: 358 SGKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYP 417
Query: 316 GAKSI--ISAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHR 143
GA+++ S ++ RK A L G IV+RHL++GDVVLFNRQ SLHRMSIMCHR
Sbjct: 418 GARNVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHR 477
Query: 142 AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
A+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMG
Sbjct: 478 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMG 524
>ref|NP_200812.2| nuclear RNA polymerase C1 [Arabidopsis thaliana]
gi|332009886|gb|AED97269.1| nuclear RNA polymerase C1
[Arabidopsis thaliana]
Length = 1376
Score = 578 bits (1491), Expect = e-162
Identities = 305/527 (57%), Positives = 375/527 (71%), Gaps = 25/527 (4%)
Frame = -2
Query: 1507 EAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNAL 1328
E + + +FTK+PY+EDVGP KI+SI FS++S E+MKA+EVQV++ G YD + KP +N L
Sbjct: 2 ETKMEIEFTKKPYIEDVGPLKIKSINFSVLSDLEVMKAAEVQVWNIGLYDHSFKPYENGL 61
Query: 1327 LDSRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCA 1148
LD RMGP K IC TC G+F NCPGHYGYL L LPV+NVGYFN IL+ILKCICK C+
Sbjct: 62 LDPRMGPPNKKS--ICTTCEGNFQNCPGHYGYLKLDLPVYNVGYFNFILDILKCICKRCS 119
Query: 1147 RILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSCKPE------TCSRCGYINACSEK 986
+LL EK +L+KMRNP+ E L+KT AKA++K C TC +CGY+N +K
Sbjct: 120 NMLLDEKLYEDHLRKMRNPRMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKK 179
Query: 985 SRNSYGY-YS*PKQKIYG*HR*RMQSSTFWDXR----------------VLGLFKRILDQ 857
+G S + KI+G +S+ + VLGLFKR+ D+
Sbjct: 180 IAAQFGIGISHDRSKIHGGEIDECKSAISHTKQSTAAINPLTYVLDPNLVLGLFKRMSDK 239
Query: 856 DCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDL 677
DCELLY++ RPE LIIT +LVPP+ IRPS + G +SNE+D+T++L II NASL + L
Sbjct: 240 DCELLYIAYRPENLIITCMLVPPLSIRPSVMIGGIQSNENDLTARLKQIILGNASLHKIL 299
Query: 676 DGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNL 497
S+ + + W+ +Q+EVA+YINSEVRG PL G +QRLKGK GRFR NL
Sbjct: 300 SQPTSSPKNMQVWDTVQIEVARYINSEVRG--CQNQPEEHPLSGILQRLKGKGGRFRANL 357
Query: 496 CGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYP 317
GKRVE+T RTVISPDPNLKITEVGIPIL+AQILT+PE VS+HNIEKLR+CV NG KYP
Sbjct: 358 SGKRVEFTGRTVISPDPNLKITEVGIPILMAQILTFPECVSRHNIEKLRQCVRNGPNKYP 417
Query: 316 GAKSI--ISAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHR 143
GA+++ S ++ RK A L G IV+RHL++GDVVLFNRQ SLHRMSIMCHR
Sbjct: 418 GARNVRYPDGSSRTLVGDYRKRIADELAIGCIVDRHLQEGDVVLFNRQPSLHRMSIMCHR 477
Query: 142 AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
A+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMG
Sbjct: 478 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMG 524
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
max]
Length = 1391
Score = 578 bits (1489), Expect = e-162
Identities = 306/516 (59%), Positives = 370/516 (71%), Gaps = 21/516 (4%)
Frame = -2
Query: 1486 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1307
FTK+P++ED GPRKI+++KFS +S EI K +EVQV+ +YD +KP LLD RMGP
Sbjct: 11 FTKEPFMEDTGPRKIKNMKFSTLSESEISKIAEVQVWKGSYYDSFKKPIHGGLLDPRMGP 70
Query: 1306 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1127
A + +C TC G+F +CPGHYGYL+L LPVFNVGY + I+ ILKCICK CARILL E
Sbjct: 71 ANKSL--VCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKCICKGCARILLDED 128
Query: 1126 ERVSYLKKMRNPKAEALQKTATAKA-ILKSC-KPETCSRCGYINACSEKSRNSYGY-YS* 956
R +LKKMR+ K L K K ++K C K C RCGYIN +K S +
Sbjct: 129 TRKKHLKKMRSSKKSELDKIDFVKVRVIKDCSKVVNCPRCGYINGSVKKLPASLTIIHDC 188
Query: 955 PKQKIYG*HR*RMQSSTFWDXR--------------VLGLFKRILDQDCELLYLSDRPEK 818
K + Y S D R VL LFKR+LD+DCELLY+++RPEK
Sbjct: 189 SKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRMLDEDCELLYVAERPEK 248
Query: 817 LIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDLDGKKSTSQCLGDW 638
LI+T+++VPPI IRPS +D SNE+DIT +L IIQ NA LRQ+L +S+ L W
Sbjct: 249 LIMTNVVVPPIAIRPSVVMDESLSNENDITERLKNIIQANAVLRQELQESTFSSKFLDGW 308
Query: 637 ELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEYTARTVI 458
++LQ EVAQ+INS+VRG+P MQ +K L GFVQRLKGK GRFRGNL GKRVEYT RTVI
Sbjct: 309 DILQNEVAQFINSDVRGIPF-YMQPTKQLAGFVQRLKGKHGRFRGNLSGKRVEYTGRTVI 367
Query: 457 SPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSIISAG---- 290
SPDPNLKI+EV IPI +A+ILTYPE V+ HNIEKLR+CV NG KYPGA+ + G
Sbjct: 368 SPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRRDGGHSW 427
Query: 289 SVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWRTLRF 110
S+ +L R+R +D L+ GDIV+RHLEDGD+VLFNRQ SLHRMSIMCHRA+IMPWRTLRF
Sbjct: 428 SLKVLCRKRAADE--LRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRF 485
Query: 109 NESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
NESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMG
Sbjct: 486 NESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMG 521
>ref|XP_006400888.1| hypothetical protein EUTSA_v10012446mg [Eutrema salsugineum]
gi|557101978|gb|ESQ42341.1| hypothetical protein
EUTSA_v10012446mg [Eutrema salsugineum]
Length = 1375
Score = 577 bits (1487), Expect = e-162
Identities = 304/528 (57%), Positives = 370/528 (70%), Gaps = 26/528 (4%)
Frame = -2
Query: 1507 EAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNAL 1328
E + + +FTKQPY+EDVGP KI+SI FS+ S EIMKA+EVQV+ + +Y+ N KP + L
Sbjct: 2 ETKMEIEFTKQPYIEDVGPLKIKSINFSIFSDLEIMKAAEVQVWRNNYYESNFKPVEGGL 61
Query: 1327 LDSRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCA 1148
LD RMGP K IC TCH DF NCPGH+GYL L LPV+NVG+ N IL+ILKCICK C+
Sbjct: 62 LDPRMGPPNKKS--ICATCHADFQNCPGHFGYLKLDLPVYNVGFLNYILDILKCICKRCS 119
Query: 1147 RILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSC------KPETCSRCGYINACSEK 986
IL+ EK +LKKMRNPK E L+KT AKA++K C + TC CGY+N +K
Sbjct: 120 NILIDEKLYEDHLKKMRNPKMEPLKKTELAKAVVKKCSMMASQRIITCKNCGYLNGMVKK 179
Query: 985 SRNSYGY--YS*PKQKIYG*HR*RMQSSTFWDXR----------------VLGLFKRILD 860
G S + KI+G +S+ VLGLFK + D
Sbjct: 180 VAAQMGIIGISHDRSKIHGGEVDEFKSAISHTRESTGAINPLTYVLDPNLVLGLFKGMSD 239
Query: 859 QDCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQD 680
+DCELLY++ RPE L I + VPP+P RPS + G +SNE+D+T ++ I+Q NAS ++
Sbjct: 240 KDCELLYIAHRPENLFIICMFVPPLPTRPSVRIGGTQSNENDLTERVKKILQDNASCKKI 299
Query: 679 LDGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGN 500
L+ ++ + + W+ +Q EVAQYINSEVRG+P SKPL G +QRLKGKQGRFR N
Sbjct: 300 LNQATTSPKNMQVWDTVQSEVAQYINSEVRGIP--NQPDSKPLSGILQRLKGKQGRFRAN 357
Query: 499 LCGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKY 320
L GKRVEYT RTVISPDPNLKITEVGIPIL+A+ILT+PE VS+HNIEKLR+CV NG KY
Sbjct: 358 LSGKRVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKY 417
Query: 319 PGAKSI--ISAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCH 146
PGA+S+ S ++ RK A L G IV+RHLE+GD VLFNRQ SLHRMSIMCH
Sbjct: 418 PGARSVRYPDGSSRTLVGDYRKRIADELTIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCH 477
Query: 145 RAKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
RA+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMG
Sbjct: 478 RARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMG 525
>ref|XP_006279465.1| hypothetical protein CARUB_v10025743mg [Capsella rubella]
gi|482548169|gb|EOA12363.1| hypothetical protein
CARUB_v10025743mg [Capsella rubella]
Length = 1376
Score = 577 bits (1487), Expect = e-162
Identities = 304/527 (57%), Positives = 374/527 (70%), Gaps = 25/527 (4%)
Frame = -2
Query: 1507 EAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNAL 1328
E + + ++TK+PY+EDVG KI+SI FSM+S E+MKA+EVQV+ + +YD N KP + L
Sbjct: 2 ETKMEIEYTKKPYIEDVGSLKIKSINFSMLSDLEVMKAAEVQVWKNSYYDPNCKPFEGGL 61
Query: 1327 LDSRMGPAGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCA 1148
LD RMGP K IC TC G+F NCPGHYGYL L LPV+N+GYFN IL+ILKCICK C+
Sbjct: 62 LDPRMGPPNKKS--ICTTCEGNFQNCPGHYGYLKLDLPVYNIGYFNFILDILKCICKCCS 119
Query: 1147 RILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSCKPE------TCSRCGYINACSEK 986
+LL EK +L+KMRNPK E L+KT AKA++K C TC +CGY+N +K
Sbjct: 120 NMLLDEKLYEDHLRKMRNPKMEPLKKTELAKAVVKKCSTMASQRIITCKKCGYLNGMVKK 179
Query: 985 SRNSYGY-YS*PKQKIYG*HR*RMQSSTFWDXR----------------VLGLFKRILDQ 857
G S + KI+G +++ VLGLFK + D+
Sbjct: 180 IPAQMGIGISHDRSKIHGGEVDEFKAAISHIKESTQAINPLTYVLDPNVVLGLFKGMSDK 239
Query: 856 DCELLYLSDRPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDL 677
DCELLY++ RPE LIIT +LVPP+ IRPS V G +SNE+D++++L IIQ NASL + L
Sbjct: 240 DCELLYIAHRPENLIITCMLVPPLSIRPSVMVGGSQSNENDLSARLKQIIQDNASLHRIL 299
Query: 676 DGKKSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNL 497
++++ + W+ +Q EVA+YINSEVRGV SKP+ G +QRLKGKQGRFR NL
Sbjct: 300 SQPTTSAKNMQVWDTVQSEVAKYINSEVRGV--QNQPDSKPMSGILQRLKGKQGRFRANL 357
Query: 496 CGKRVEYTARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYP 317
GKRVEYT RTVISPDPNLKITEVGIPIL+A+ILT+PE VS+HNIEKLR+CV NG KYP
Sbjct: 358 SGKRVEYTGRTVISPDPNLKITEVGIPILMARILTFPECVSRHNIEKLRQCVRNGPNKYP 417
Query: 316 GAKSII--SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHR 143
GA+++ S ++ RK A L G IV+RHLE+GD VLFNRQ SLHRMSIMCHR
Sbjct: 418 GARNVRYPDGSSRALVGDYRKRIADELAIGCIVDRHLEEGDAVLFNRQPSLHRMSIMCHR 477
Query: 142 AKIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
A+IMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA+ LMG
Sbjct: 478 ARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAITLMG 524
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 576 bits (1484), Expect = e-161
Identities = 311/519 (59%), Positives = 372/519 (71%), Gaps = 24/519 (4%)
Frame = -2
Query: 1486 FTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQNRKPKKNALLDSRMGP 1307
+TKQPY+EDVGPR+I+SI+FS MSG +I+KASE QV+ +YD N+K LLD+RMG
Sbjct: 10 YTKQPYIEDVGPRRIKSIQFSTMSGSDILKASECQVHLGQYYDANKKAIVGGLLDTRMG- 68
Query: 1306 AGSKMGIICETCHGDFANCPGHYGYLHLCLPVFNVGYFNAILNILKCICKSCARILLSEK 1127
A +K G C+TC G F +CPGH+GYL+L LPV+NVGY + IL+ILKCICKSC+R+L+ EK
Sbjct: 69 APNKHGT-CQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKCICKSCSRVLVDEK 127
Query: 1126 ERVSYLKKMRNPKAEALQKTATAKAILKSC------KPETCSRCGYINACSEK------- 986
R SYLK+MRNP+ E L+K K I+K C K C RCGY+N +K
Sbjct: 128 LRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSKAVKCLRCGYMNGMVKKAGSVVGI 187
Query: 985 ----SRNSYGYYS*PKQKIYG*HR*R----MQSSTFWDXRVLGLFKRILDQDCELLYLSD 830
S+ GY K I R + + RVL LF+R++++DCELLYL
Sbjct: 188 IHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQRMVEEDCELLYLQG 247
Query: 829 RPEKLIITDILVPPIPIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDL-DGKKSTSQ 653
RPEKLIIT I VPPI IRPS F +G +SNE+DIT +L IIQ NA LR +L +G+++ +
Sbjct: 248 RPEKLIITTIAVPPISIRPSVFTEGSQSNENDITERLKQIIQFNAKLRLELLEGRRTGIK 307
Query: 652 CLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGKRVEYT 473
L W+ LQ V YINS+VR +PL M Q +PL GFVQRL GKQGRFR NL GKRVE+T
Sbjct: 308 YLIGWDELQAVVTLYINSDVR-IPLDM-QVGRPLSGFVQRLTGKQGRFRQNLAGKRVEFT 365
Query: 472 ARTVISPDPNLKITEVGIPILIAQILTYPELVSQHNIEKLRKCVVNGAYKYPGAKSII-- 299
RTVISPDPNLKITEV IPI +A+ILTYPE V+ HNIEKLR+CV NG+YKYPGA+ +
Sbjct: 366 GRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTYP 425
Query: 298 SAGSVWILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQSSLHRMSIMCHRAKIMPWRT 119
S + RK A LK G IV RHLEDGDVVLFNRQ SLHRMSIMCHRA+IMPWRT
Sbjct: 426 DGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRT 485
Query: 118 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMG 2
LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA +LMG
Sbjct: 486 LRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMG 524