BLASTX nr result

ID: Papaver27_contig00015846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00015846
         (448 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34367.3| unnamed protein product [Vitis vinifera]              219   3e-55
ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...   219   3e-55
ref|XP_007040301.1| Xeroderma pigmentosum complementation group ...   219   4e-55
gb|EYU40077.1| hypothetical protein MIMGU_mgv1a001651mg [Mimulus...   218   5e-55
ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Popu...   216   3e-54
ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ri...   216   3e-54
ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [So...   215   4e-54
ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [So...   215   4e-54
ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fr...   214   1e-53
ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, pa...   213   2e-53
ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cu...   213   2e-53
gb|ABR16132.1| unknown [Picea sitchensis]                             212   4e-53
ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp....   212   5e-53
ref|XP_002870640.1| DNA repair and transcription factor XPB1 [Ar...   211   8e-53
ref|XP_006285201.1| hypothetical protein CARUB_v10006557mg [Caps...   211   1e-52
ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]...   210   2e-52
ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutr...   210   2e-52
gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabido...   210   2e-52
dbj|BAB08509.1| DNA excision repair cross-complementing protein;...   210   2e-52
ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like iso...   207   1e-51

>emb|CBI34367.3| unnamed protein product [Vitis vinifera]
          Length = 850

 Score =  219 bits (558), Expect = 3e-55
 Identities = 112/142 (78%), Positives = 121/142 (85%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPP DSGADL YH  DEQL LL
Sbjct: 710  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPDSGADLSYHRLDEQLALL 769

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKG--KYPGQG 356
            GKVL+AGDD +GLEQLDED DDIAL KARR++ SMS MSGA GM YME+  G  K+ GQG
Sbjct: 770  GKVLSAGDDAVGLEQLDEDADDIALQKARRSVGSMSAMSGASGMVYMEYNTGRNKHGGQG 829

Query: 357  HLKSIKPKDPTKRHSLFKKRFG 422
             +K  KPKDP+KRH LFK+RFG
Sbjct: 830  QIKG-KPKDPSKRHHLFKRRFG 850


>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score =  219 bits (558), Expect = 3e-55
 Identities = 112/142 (78%), Positives = 121/142 (85%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPP DSGADL YH  DEQL LL
Sbjct: 631  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPPDSGADLSYHRLDEQLALL 690

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKG--KYPGQG 356
            GKVL+AGDD +GLEQLDED DDIAL KARR++ SMS MSGA GM YME+  G  K+ GQG
Sbjct: 691  GKVLSAGDDAVGLEQLDEDADDIALQKARRSVGSMSAMSGASGMVYMEYNTGRNKHGGQG 750

Query: 357  HLKSIKPKDPTKRHSLFKKRFG 422
             +K  KPKDP+KRH LFK+RFG
Sbjct: 751  QIKG-KPKDPSKRHHLFKRRFG 771


>ref|XP_007040301.1| Xeroderma pigmentosum complementation group B 1 isoform 1 [Theobroma
            cacao] gi|508777546|gb|EOY24802.1| Xeroderma pigmentosum
            complementation group B 1 isoform 1 [Theobroma cacao]
          Length = 771

 Score =  219 bits (557), Expect = 4e-55
 Identities = 110/142 (77%), Positives = 123/142 (86%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP D+GADL Y+  DEQL LL
Sbjct: 631  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGADLSYYHLDEQLALL 690

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKG--KYPGQG 356
            GKVL AGDD +GLEQL+ED DDIAL KARR+  SMS MSGA+GM YME++ G  KYPGQG
Sbjct: 691  GKVLTAGDDAVGLEQLEEDADDIALHKARRSTGSMSAMSGANGMVYMEYSTGKHKYPGQG 750

Query: 357  HLKSIKPKDPTKRHSLFKKRFG 422
             +KS KPKDP+KRH LFK+R+G
Sbjct: 751  QIKS-KPKDPSKRHYLFKRRYG 771


>gb|EYU40077.1| hypothetical protein MIMGU_mgv1a001651mg [Mimulus guttatus]
          Length = 778

 Score =  218 bits (556), Expect = 5e-55
 Identities = 107/140 (76%), Positives = 121/140 (86%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPPSDSG++L YH  ++QL LL
Sbjct: 639  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPSDSGSELSYHRLEDQLALL 698

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
            GKVL+AGDD +GLEQL+ED DDIAL KARR+  SMS MSGA+GM YME++ G+    G +
Sbjct: 699  GKVLSAGDDAVGLEQLEEDADDIALQKARRSAGSMSAMSGANGMVYMEYSTGQKKLHGQM 758

Query: 363  KSIKPKDPTKRHSLFKKRFG 422
            KS KPKDPTKRH LFKKRFG
Sbjct: 759  KSNKPKDPTKRHQLFKKRFG 778


>ref|XP_006368764.1| hypothetical protein POPTR_0001s09670g [Populus trichocarpa]
            gi|550346909|gb|ERP65333.1| hypothetical protein
            POPTR_0001s09670g [Populus trichocarpa]
          Length = 783

 Score =  216 bits (550), Expect = 3e-54
 Identities = 108/140 (77%), Positives = 121/140 (86%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP+DSGADL Y+S D+QL LL
Sbjct: 645  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPADSGADLSYNSLDDQLGLL 704

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
             KVL+AGDD +GLEQLDED DDIAL KARR M SMS MSGA+GM YME++ G+  G+G +
Sbjct: 705  AKVLSAGDDAVGLEQLDEDADDIALHKARRYMGSMSAMSGANGMVYMEYSTGQKGGKGQI 764

Query: 363  KSIKPKDPTKRHSLFKKRFG 422
            K  KPKDP KRH LFK+RFG
Sbjct: 765  KG-KPKDPAKRHYLFKRRFG 783


>ref|XP_002509835.1| rad25/xp-B DNA repair helicase, putative [Ricinus communis]
            gi|223549734|gb|EEF51222.1| rad25/xp-B DNA repair
            helicase, putative [Ricinus communis]
          Length = 768

 Score =  216 bits (549), Expect = 3e-54
 Identities = 110/142 (77%), Positives = 120/142 (84%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP DSG DL Y+  DEQL LL
Sbjct: 628  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPLDSGPDLSYYHLDEQLALL 687

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKG--KYPGQG 356
             KVLNAGDD +GLEQL+ED DDIAL KARR+M SMS MSGA GM YME++ G  K  GQG
Sbjct: 688  AKVLNAGDDAVGLEQLEEDADDIALHKARRSMGSMSAMSGAKGMVYMEYSTGRNKLAGQG 747

Query: 357  HLKSIKPKDPTKRHSLFKKRFG 422
            H+KS KPKDP KRH LFK+R+G
Sbjct: 748  HIKS-KPKDPAKRHYLFKRRYG 768


>ref|XP_006343950.1| PREDICTED: DNA repair helicase XPB1-like [Solanum tuberosum]
          Length = 768

 Score =  215 bits (548), Expect = 4e-54
 Identities = 109/140 (77%), Positives = 120/140 (85%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPPSDSG++L YH  D+QL LL
Sbjct: 633  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPSDSGSELSYHRLDDQLQLL 692

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
            GKVL+AGDD +GLEQLDED DD+AL KARR M SMS MSGA GM YME+  GK   +G +
Sbjct: 693  GKVLSAGDDAVGLEQLDEDADDVALQKARRYMGSMSAMSGAKGMVYMEYNTGK---RGLI 749

Query: 363  KSIKPKDPTKRHSLFKKRFG 422
            K+ KPKDPTKRH LFKKRFG
Sbjct: 750  KN-KPKDPTKRHQLFKKRFG 768


>ref|XP_004245582.1| PREDICTED: DNA repair helicase XPB1-like [Solanum lycopersicum]
          Length = 768

 Score =  215 bits (548), Expect = 4e-54
 Identities = 109/140 (77%), Positives = 120/140 (85%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPPSDSG++L YH  DEQL LL
Sbjct: 633  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPSDSGSELSYHRLDEQLQLL 692

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
            GKVL+AGDD +GLEQLDED DD+AL KARR + SMS MSGA GM YME+  GK   +G +
Sbjct: 693  GKVLSAGDDAVGLEQLDEDADDVALQKARRYVGSMSAMSGAKGMVYMEYNSGK---KGLI 749

Query: 363  KSIKPKDPTKRHSLFKKRFG 422
            K+ KPKDPTKRH LFKKRFG
Sbjct: 750  KN-KPKDPTKRHQLFKKRFG 768


>ref|XP_004298821.1| PREDICTED: DNA repair helicase XPB1-like [Fragaria vesca subsp.
            vesca]
          Length = 768

 Score =  214 bits (544), Expect = 1e-53
 Identities = 110/140 (78%), Positives = 117/140 (83%), Gaps = 1/140 (0%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP DSGADL YH  DEQL LL
Sbjct: 629  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDSGADLSYHRLDEQLQLL 688

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGK-YPGQGH 359
             KVL AGDD +GLEQLDED DDIAL+K+RR   SMS MSGADG  YME++ GK   G+G 
Sbjct: 689  SKVLTAGDDAVGLEQLDEDIDDIALLKSRRFSGSMSAMSGADGRVYMEYSTGKNRNGKGQ 748

Query: 360  LKSIKPKDPTKRHSLFKKRF 419
            LKS KPKDP KRH LFKKRF
Sbjct: 749  LKS-KPKDPAKRHHLFKKRF 767


>ref|XP_004172213.1| PREDICTED: DNA repair helicase XPB1-like, partial [Cucumis sativus]
          Length = 725

 Score =  213 bits (542), Expect = 2e-53
 Identities = 108/140 (77%), Positives = 120/140 (85%), Gaps = 1/140 (0%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP+D+GA+L YH  D+QL LL
Sbjct: 586  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPADAGAELSYHRLDDQLALL 645

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKG-KYPGQGH 359
            GKVLNAGDDM+GLEQL++D D IAL  ARR+  SMS MSGA+GM YME++ G K  GQG 
Sbjct: 646  GKVLNAGDDMVGLEQLEDDADQIALDAARRSKGSMSAMSGANGMVYMEYSTGRKLAGQGQ 705

Query: 360  LKSIKPKDPTKRHSLFKKRF 419
            LKS KPKDP KRH LFKKRF
Sbjct: 706  LKS-KPKDPAKRHHLFKKRF 724


>ref|XP_004143892.1| PREDICTED: DNA repair helicase XPB1-like [Cucumis sativus]
          Length = 768

 Score =  213 bits (542), Expect = 2e-53
 Identities = 108/140 (77%), Positives = 120/140 (85%), Gaps = 1/140 (0%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP+D+GA+L YH  D+QL LL
Sbjct: 629  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPADAGAELSYHRLDDQLALL 688

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKG-KYPGQGH 359
            GKVLNAGDDM+GLEQL++D D IAL  ARR+  SMS MSGA+GM YME++ G K  GQG 
Sbjct: 689  GKVLNAGDDMVGLEQLEDDADQIALDAARRSKGSMSAMSGANGMVYMEYSTGRKLAGQGQ 748

Query: 360  LKSIKPKDPTKRHSLFKKRF 419
            LKS KPKDP KRH LFKKRF
Sbjct: 749  LKS-KPKDPAKRHHLFKKRF 767


>gb|ABR16132.1| unknown [Picea sitchensis]
          Length = 772

 Score =  212 bits (540), Expect = 4e-53
 Identities = 106/142 (74%), Positives = 122/142 (85%), Gaps = 2/142 (1%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVS DTQEMYYSTKRQQFLIDQGYSFK+ITSLPP D+GADL YH+ ++QL LL
Sbjct: 632  YNAFFYSLVSNDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDTGADLNYHTLEDQLALL 691

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFT--KGKYPGQG 356
             KVLNAGDD +GLEQL+ED DDI L+KARR++ SMS MSGA GM YME++  +GK   QG
Sbjct: 692  TKVLNAGDDAVGLEQLEEDADDITLLKARRSVGSMSAMSGASGMVYMEYSTGRGKQGMQG 751

Query: 357  HLKSIKPKDPTKRHSLFKKRFG 422
             +KS KP+DPTKRH+LFKKRFG
Sbjct: 752  QMKS-KPRDPTKRHNLFKKRFG 772


>ref|XP_002870639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316475|gb|EFH46898.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 779

 Score =  212 bits (539), Expect = 5e-53
 Identities = 104/139 (74%), Positives = 119/139 (85%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP D+G+ L YHS++EQL LL
Sbjct: 642  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLL 701

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
            GKVLNAGDD++GLEQL+EDTD +AL KARR+M SMS MSGA GM YME+  G++      
Sbjct: 702  GKVLNAGDDLVGLEQLEEDTDGMALQKARRSMGSMSLMSGAKGMVYMEYNSGRHKSGQQF 761

Query: 363  KSIKPKDPTKRHSLFKKRF 419
            K  KPKDPTKRH+LFKKR+
Sbjct: 762  K--KPKDPTKRHNLFKKRY 778


>ref|XP_002870640.1| DNA repair and transcription factor XPB1 [Arabidopsis lyrata subsp.
            lyrata] gi|297316476|gb|EFH46899.1| DNA repair and
            transcription factor XPB1 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 767

 Score =  211 bits (537), Expect = 8e-53
 Identities = 102/140 (72%), Positives = 120/140 (85%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP D+G+ LGYHS++EQL LL
Sbjct: 630  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGSSLGYHSQEEQLSLL 689

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
            GKVLNAGDD++GLEQL+EDTD +AL KARR+M SMS MSGA G  YME+  G++     +
Sbjct: 690  GKVLNAGDDLVGLEQLEEDTDGMALQKARRSMGSMSAMSGAKGRVYMEYNSGRHKSGQQV 749

Query: 363  KSIKPKDPTKRHSLFKKRFG 422
            K  KPKDPT+RH +F+KR+G
Sbjct: 750  K--KPKDPTQRHQMFRKRYG 767


>ref|XP_006285201.1| hypothetical protein CARUB_v10006557mg [Capsella rubella]
            gi|482553906|gb|EOA18099.1| hypothetical protein
            CARUB_v10006557mg [Capsella rubella]
          Length = 821

 Score =  211 bits (536), Expect = 1e-52
 Identities = 105/139 (75%), Positives = 119/139 (85%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP+D+G+ L YHS++EQL LL
Sbjct: 685  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPTDAGSSLSYHSQEEQLSLL 744

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
            GKVLNAGDD++GLEQL+EDTD +AL KARR+M SMS MSGA GM YME+      GQ   
Sbjct: 745  GKVLNAGDDLVGLEQLEEDTDGMALQKARRSMGSMSAMSGAKGMVYMEYNSRNKSGQ--- 801

Query: 363  KSIKPKDPTKRHSLFKKRF 419
            +  KPKDPTKRH+LFKKRF
Sbjct: 802  QFKKPKDPTKRHNLFKKRF 820


>ref|NP_568592.1| DNA repair helicase XPB1 [Arabidopsis thaliana]
            gi|57013137|sp|Q38861.3|XPB1_ARATH RecName: Full=DNA
            repair helicase XPB1; AltName: Full=ERCC3 homolog 1;
            AltName: Full=Protein araXPB; AltName: Full=RAD25 homolog
            1; Short=AtXPB1; AltName: Full=XPB homolog 1
            gi|11771735|gb|AAC49987.2| putative DNA repair protein
            and transcription factor [Arabidopsis thaliana]
            gi|14517424|gb|AAK62602.1| AT5g41370/MYC6_8 [Arabidopsis
            thaliana] gi|21360401|gb|AAM47316.1| AT5g41370/MYC6_8
            [Arabidopsis thaliana] gi|332007287|gb|AED94670.1| DNA
            repair helicase XPB1 [Arabidopsis thaliana]
          Length = 767

 Score =  210 bits (534), Expect = 2e-52
 Identities = 102/139 (73%), Positives = 119/139 (85%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP D+G+ L YHS++EQL LL
Sbjct: 630  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLL 689

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
            GKV+NAGDD++GLEQL+EDTD +AL KARR+M SMS MSG+ GM YME+  G++      
Sbjct: 690  GKVMNAGDDLVGLEQLEEDTDGMALQKARRSMGSMSVMSGSKGMVYMEYNSGRHKSGQQF 749

Query: 363  KSIKPKDPTKRHSLFKKRF 419
            K  KPKDPTKRH+LFKKR+
Sbjct: 750  K--KPKDPTKRHNLFKKRY 766


>ref|XP_006405358.1| hypothetical protein EUTSA_v10027651mg [Eutrema salsugineum]
            gi|557106496|gb|ESQ46811.1| hypothetical protein
            EUTSA_v10027651mg [Eutrema salsugineum]
          Length = 769

 Score =  210 bits (534), Expect = 2e-52
 Identities = 103/139 (74%), Positives = 116/139 (83%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP D+GA L YHS++EQL LL
Sbjct: 631  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGASLSYHSQEEQLSLL 690

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
             KVLNAGDD++GLEQL+EDTD +AL K RR  RS+S MSGA GM YME+  G++   G  
Sbjct: 691  AKVLNAGDDLVGLEQLEEDTDGMALQKERRN-RSLSEMSGAKGMVYMEYNSGRHKSSGQQ 749

Query: 363  KSIKPKDPTKRHSLFKKRF 419
            +  KPKDPTKRH LFKKRF
Sbjct: 750  QFKKPKDPTKRHQLFKKRF 768


>gb|AAT36215.1| DNA repair and transcription factor XPB1 [Arabidopsis thaliana]
          Length = 767

 Score =  210 bits (534), Expect = 2e-52
 Identities = 102/139 (73%), Positives = 119/139 (85%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP D+G+ L YHS++EQL LL
Sbjct: 630  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLL 689

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
            GKV+NAGDD++GLEQL+EDTD +AL KARR+M SMS MSG+ GM YME+  G++      
Sbjct: 690  GKVMNAGDDLVGLEQLEEDTDGMALQKARRSMGSMSVMSGSKGMVYMEYNSGRHKSGQQF 749

Query: 363  KSIKPKDPTKRHSLFKKRF 419
            K  KPKDPTKRH+LFKKR+
Sbjct: 750  K--KPKDPTKRHNLFKKRY 766


>dbj|BAB08509.1| DNA excision repair cross-complementing protein; similar to human
            Xeroderma pigmentosum group B DNA repair protein
            [Arabidopsis thaliana]
          Length = 755

 Score =  210 bits (534), Expect = 2e-52
 Identities = 102/139 (73%), Positives = 119/139 (85%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFK+ITSLPP D+G+ L YHS++EQL LL
Sbjct: 618  YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDAGSSLSYHSQEEQLSLL 677

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
            GKV+NAGDD++GLEQL+EDTD +AL KARR+M SMS MSG+ GM YME+  G++      
Sbjct: 678  GKVMNAGDDLVGLEQLEEDTDGMALQKARRSMGSMSVMSGSKGMVYMEYNSGRHKSGQQF 737

Query: 363  KSIKPKDPTKRHSLFKKRF 419
            K  KPKDPTKRH+LFKKR+
Sbjct: 738  K--KPKDPTKRHNLFKKRY 754


>ref|XP_006580561.1| PREDICTED: DNA repair helicase XPB1-like isoform X2 [Glycine max]
          Length = 769

 Score =  207 bits (527), Expect = 1e-51
 Identities = 102/140 (72%), Positives = 116/140 (82%)
 Frame = +3

Query: 3    YNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKIITSLPPSDSGADLGYHSRDEQLHLL 182
            YNAFFYSLVS DTQEMYYSTKRQQFLIDQGYSFK+ITSLPP D G +L YH  ++QL LL
Sbjct: 629  YNAFFYSLVSIDTQEMYYSTKRQQFLIDQGYSFKVITSLPPPDEGPNLSYHRLEDQLALL 688

Query: 183  GKVLNAGDDMIGLEQLDEDTDDIALIKARRTMRSMSHMSGADGMAYMEFTKGKYPGQGHL 362
            GKVL+AGDD +GLEQLDED D+IAL  ARR+  SMS MSGA GM YME++ G+  GQG +
Sbjct: 689  GKVLSAGDDQVGLEQLDEDADEIALQSARRSQGSMSAMSGAKGMVYMEYSTGRNKGQGQI 748

Query: 363  KSIKPKDPTKRHSLFKKRFG 422
            KS KPKDP KRH LFK+R+G
Sbjct: 749  KS-KPKDPAKRHFLFKRRYG 767


Top