BLASTX nr result
ID: Papaver27_contig00014542
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00014542
(912 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003538481.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 52 7e-11
ref|XP_006591392.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 52 7e-11
ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 51 9e-11
emb|CBI25423.3| unnamed protein product [Vitis vinifera] 51 9e-11
ref|XP_004148172.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 52 1e-10
ref|XP_006290198.1| hypothetical protein CARUB_v10003883mg [Caps... 54 2e-10
ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 52 2e-10
ref|XP_004307686.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 50 4e-10
ref|XP_007163578.1| hypothetical protein PHAVU_001G246000g [Phas... 50 5e-10
ref|XP_004500517.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 51 5e-10
ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putativ... 53 7e-10
ref|XP_002312182.1| DEAD/DEAH box helicase family protein [Popul... 52 7e-10
ref|XP_003600976.1| DEAD-box ATP-dependent RNA helicase [Medicag... 50 9e-10
ref|XP_006399006.1| hypothetical protein EUTSA_v10013039mg [Eutr... 51 1e-09
ref|NP_196164.1| DEAD-box ATP-dependent RNA helicase 18 [Arabido... 53 2e-09
ref|XP_006435808.1| hypothetical protein CICLE_v10031038mg [Citr... 51 2e-09
ref|XP_006486256.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 51 2e-09
ref|XP_006435809.1| hypothetical protein CICLE_v10031038mg [Citr... 51 2e-09
ref|XP_002871160.1| hypothetical protein ARALYDRAFT_908458 [Arab... 53 2e-09
ref|XP_006435811.1| hypothetical protein CICLE_v10033565mg [Citr... 51 3e-09
>ref|XP_003538481.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like isoformX1
[Glycine max]
Length = 665
Score = 52.0 bits (123), Expect(2) = 7e-11
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFV+PLVEILRRSSS K
Sbjct: 55 VAVDAATGSGKTLAFVIPLVEILRRSSSHPK 85
Score = 42.4 bits (98), Expect(2) = 7e-11
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +3
Query: 18 IRSVKLMAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ SV+ + PPLS+P L A++ GF++ TPVQ+ATI
Sbjct: 10 LTSVRFSDLNPPLSEPVLQALSHSGFDFCTPVQAATI 46
Score = 46.2 bits (108), Expect(3) = 9e-07
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXXAK----DKLEPASF 554
I I++ K RT +FSAT TEA+EELAKAGLR ++ +P S
Sbjct: 186 ITSIISLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSEKGPASSKQPESS 245
Query: 555 KTPLGLEME 581
KTP GL +E
Sbjct: 246 KTPSGLHIE 254
Score = 27.3 bits (59), Expect(3) = 9e-07
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 2/20 (10%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQI 382
+ILILDEADRLL G +KQI
Sbjct: 167 EILILDEADRLLDMGFQKQI 186
Score = 25.8 bits (55), Expect(3) = 9e-07
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
+K SQL+D L KN ++KII + M C C
Sbjct: 262 KKPSQLLDILIKNRSKKII-------IYFMTCAC 288
>ref|XP_006591392.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like isoform X2
[Glycine max]
Length = 644
Score = 52.0 bits (123), Expect(2) = 7e-11
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFV+PLVEILRRSSS K
Sbjct: 55 VAVDAATGSGKTLAFVIPLVEILRRSSSHPK 85
Score = 42.4 bits (98), Expect(2) = 7e-11
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +3
Query: 18 IRSVKLMAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ SV+ + PPLS+P L A++ GF++ TPVQ+ATI
Sbjct: 10 LTSVRFSDLNPPLSEPVLQALSHSGFDFCTPVQAATI 46
Score = 46.2 bits (108), Expect(3) = 9e-07
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXXAK----DKLEPASF 554
I I++ K RT +FSAT TEA+EELAKAGLR ++ +P S
Sbjct: 165 ITSIISLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSEKGPASSKQPESS 224
Query: 555 KTPLGLEME 581
KTP GL +E
Sbjct: 225 KTPSGLHIE 233
Score = 27.3 bits (59), Expect(3) = 9e-07
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 2/20 (10%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQI 382
+ILILDEADRLL G +KQI
Sbjct: 146 EILILDEADRLLDMGFQKQI 165
Score = 25.8 bits (55), Expect(3) = 9e-07
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
+K SQL+D L KN ++KII + M C C
Sbjct: 241 KKPSQLLDILIKNRSKKII-------IYFMTCAC 267
>ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Vitis
vinifera]
Length = 595
Score = 50.8 bits (120), Expect(2) = 9e-11
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFVVPLVEILRR+SS K
Sbjct: 60 VAVDAATGSGKTLAFVVPLVEILRRASSAPK 90
Score = 43.1 bits (100), Expect(2) = 9e-11
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +3
Query: 18 IRSVKLMAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ + + + PPLS+P L+A+T+ GF++ TPVQ+ATI
Sbjct: 15 LTTTRFSELNPPLSEPVLEALTQSGFHFCTPVQAATI 51
Score = 45.1 bits (105), Expect(3) = 9e-07
Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGL----RYXXXXXXXXXXXAKDKLEPASF 554
I I+ R K RT +FSAT TEAVEEL+KAGL R + + AS
Sbjct: 191 ITSIIARLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKSLNDSVSSQQLASS 250
Query: 555 KTPLGLEME 581
KTP GL +E
Sbjct: 251 KTPSGLNIE 259
Score = 27.3 bits (59), Expect(3) = 9e-07
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 2/20 (10%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQI 382
+ILILDEADRLL G +KQI
Sbjct: 172 EILILDEADRLLDMGFQKQI 191
Score = 26.9 bits (58), Expect(3) = 9e-07
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
+K SQLVD L KN ++KII + M C C
Sbjct: 267 KKPSQLVDLLIKNKSKKII-------IYFMTCAC 293
>emb|CBI25423.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 50.8 bits (120), Expect(2) = 9e-11
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFVVPLVEILRR+SS K
Sbjct: 60 VAVDAATGSGKTLAFVVPLVEILRRASSAPK 90
Score = 43.1 bits (100), Expect(2) = 9e-11
Identities = 17/37 (45%), Positives = 28/37 (75%)
Frame = +3
Query: 18 IRSVKLMAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ + + + PPLS+P L+A+T+ GF++ TPVQ+ATI
Sbjct: 15 LTTTRFSELNPPLSEPVLEALTQSGFHFCTPVQAATI 51
Score = 45.1 bits (105), Expect(3) = 9e-07
Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGL----RYXXXXXXXXXXXAKDKLEPASF 554
I I+ R K RT +FSAT TEAVEEL+KAGL R + + AS
Sbjct: 191 ITSIIARLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKSLNDSVSSQQLASS 250
Query: 555 KTPLGLEME 581
KTP GL +E
Sbjct: 251 KTPSGLNIE 259
Score = 27.3 bits (59), Expect(3) = 9e-07
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 2/20 (10%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQI 382
+ILILDEADRLL G +KQI
Sbjct: 172 EILILDEADRLLDMGFQKQI 191
Score = 26.9 bits (58), Expect(3) = 9e-07
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
+K SQLVD L KN ++KII + M C C
Sbjct: 267 KKPSQLVDLLIKNKSKKII-------IYFMTCAC 293
>ref|XP_004148172.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
sativus] gi|449515784|ref|XP_004164928.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 18-like [Cucumis
sativus]
Length = 587
Score = 51.6 bits (122), Expect(2) = 1e-10
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCKGMHL 237
+ +DAATGSGKTLAFVVP+VEILRR SS+ K H+
Sbjct: 55 VAVDAATGSGKTLAFVVPVVEILRRCSSRPKPHHV 89
Score = 41.6 bits (96), Expect(2) = 1e-10
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 18 IRSVKLMAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ + + + PPLS P +DA+T+ GF + TPVQ+ATI
Sbjct: 10 LTTTRFSDLQPPLSPPVIDALTQSGFQFCTPVQAATI 46
Score = 44.3 bits (103), Expect(3) = 2e-06
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXXAKDKLEP------A 548
I I++R K RT +FSAT TEAVEEL+KAGLR A+ K P A
Sbjct: 186 ITSIISRLPKLRRTGLFSATQTEAVEELSKAGLR----NPIRVEVKAESKPGPLSSTQLA 241
Query: 549 SFKTPLGLEME 581
S KTP L +E
Sbjct: 242 SSKTPSSLHIE 252
Score = 27.3 bits (59), Expect(3) = 2e-06
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM 642
+KS+QLVD L KN ++KII+
Sbjct: 260 KKSTQLVDILIKNKSKKIIV 279
Score = 26.9 bits (58), Expect(3) = 2e-06
Identities = 14/20 (70%), Positives = 17/20 (85%), Gaps = 2/20 (10%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQI 382
++LILDEADRLL G +KQI
Sbjct: 167 EVLILDEADRLLDMGFQKQI 186
>ref|XP_006290198.1| hypothetical protein CARUB_v10003883mg [Capsella rubella]
gi|482558904|gb|EOA23096.1| hypothetical protein
CARUB_v10003883mg [Capsella rubella]
Length = 595
Score = 53.5 bits (127), Expect(3) = 2e-10
Identities = 29/65 (44%), Positives = 39/65 (60%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXXAKDKLEPASFKTPL 566
+N I++R KQ RT +FSAT TE VEELAKAGLR ++ + A+ +TP
Sbjct: 190 VNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESNSESSQQLANSRTPS 249
Query: 567 GLEME 581
GL +E
Sbjct: 250 GLHLE 254
Score = 29.6 bits (65), Expect(3) = 2e-10
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM 642
+KSSQLVD L KN N+K+I+
Sbjct: 262 KKSSQLVDLLIKNSNKKLIV 281
Score = 29.3 bits (64), Expect(3) = 2e-10
Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQIN 385
+ILILDEADRLL G +KQ+N
Sbjct: 171 EILILDEADRLLEMGFQKQVN 191
Score = 48.9 bits (115), Expect(2) = 1e-06
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSS 216
+ +DAATGSGKTLAFV+PLVEILR+S+S
Sbjct: 58 VAVDAATGSGKTLAFVIPLVEILRKSTS 85
Score = 31.2 bits (69), Expect(2) = 1e-06
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 36 MAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ + PPLS ++A+ + F + TPVQ+ATI
Sbjct: 19 LELEPPLSGDIIEALKKSNFEFCTPVQAATI 49
>ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Glycine
max]
Length = 589
Score = 52.4 bits (124), Expect(2) = 2e-10
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFVVPLVEILRRSSS K
Sbjct: 55 VAVDAATGSGKTLAFVVPLVEILRRSSSHPK 85
Score = 40.4 bits (93), Expect(2) = 2e-10
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 18 IRSVKLMAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ S + + PPLS+P L A++ GF + TPVQ+ATI
Sbjct: 10 LTSTRFSDLNPPLSEPVLQALSHSGFEFCTPVQAATI 46
Score = 48.1 bits (113), Expect(3) = 3e-07
Identities = 30/69 (43%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXXAKD----KLEPASF 554
I I+T K RT +FSAT TEA+EELAKAGLR +++ +P S
Sbjct: 186 ITSIITLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSENGPASSKQPESS 245
Query: 555 KTPLGLEME 581
KTP GL +E
Sbjct: 246 KTPSGLHIE 254
Score = 27.3 bits (59), Expect(3) = 3e-07
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 2/20 (10%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQI 382
+ILILDEADRLL G +KQI
Sbjct: 167 EILILDEADRLLDMGFQKQI 186
Score = 25.4 bits (54), Expect(3) = 3e-07
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
+K SQLV L KN+++KII + M C C
Sbjct: 262 KKPSQLVHILIKNLSKKII-------IYFMTCAC 288
>ref|XP_004307686.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Fragaria
vesca subsp. vesca]
Length = 592
Score = 50.1 bits (118), Expect(2) = 4e-10
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFVVPLVEILRR+S+ K
Sbjct: 57 VAVDAATGSGKTLAFVVPLVEILRRASTDPK 87
Score = 41.6 bits (96), Expect(2) = 4e-10
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 18 IRSVKLMAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ + + + PPLS+P L A+T GF++ TPVQ+ATI
Sbjct: 12 LSNTRFSELKPPLSEPVLQALTAAGFDFCTPVQAATI 48
>ref|XP_007163578.1| hypothetical protein PHAVU_001G246000g [Phaseolus vulgaris]
gi|561037042|gb|ESW35572.1| hypothetical protein
PHAVU_001G246000g [Phaseolus vulgaris]
Length = 588
Score = 50.4 bits (119), Expect(2) = 5e-10
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFVVPLVEILRRS S K
Sbjct: 55 VAVDAATGSGKTLAFVVPLVEILRRSCSHPK 85
Score = 40.8 bits (94), Expect(2) = 5e-10
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 18 IRSVKLMAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ S + + PPLS P L A+++ GF++ TPVQ+ATI
Sbjct: 10 LTSTRFSDLNPPLSDPVLQALSQSGFDFCTPVQAATI 46
Score = 46.6 bits (109), Expect(3) = 5e-07
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXXAKD----KLEPASF 554
I I+++ K RT +FSAT TEA+EEL+KAGLR +++ +P S
Sbjct: 186 ITAIISQLPKLRRTGLFSATQTEAIEELSKAGLRNPVRVEVRAETKSENDPSSSKQPESS 245
Query: 555 KTPLGLEME 581
KTP GL +E
Sbjct: 246 KTPSGLHIE 254
Score = 27.3 bits (59), Expect(3) = 5e-07
Identities = 15/20 (75%), Positives = 17/20 (85%), Gaps = 2/20 (10%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQI 382
+ILILDEADRLL G +KQI
Sbjct: 167 EILILDEADRLLDMGFQKQI 186
Score = 26.2 bits (56), Expect(3) = 5e-07
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
+K SQL+D L KN + KII + M C C
Sbjct: 262 KKPSQLIDILIKNRSRKII-------IYFMTCAC 288
>ref|XP_004500517.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Cicer
arietinum]
Length = 587
Score = 50.8 bits (120), Expect(2) = 5e-10
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFV+PLVEILRRS+S K
Sbjct: 55 VAVDAATGSGKTLAFVIPLVEILRRSASNPK 85
Score = 40.4 bits (93), Expect(2) = 5e-10
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +3
Query: 18 IRSVKLMAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ S + + PPLS P L A++ GF++ TPVQ+ATI
Sbjct: 10 LTSTRFSELNPPLSDPVLQALSHSGFDFCTPVQAATI 46
Score = 46.2 bits (108), Expect(3) = 3e-08
Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLR------YXXXXXXXXXXXAKDKLEPA 548
+N I+T+ K RT +FSAT T+AVEELAKAGLR A +LE
Sbjct: 186 LNAIITQLPKLRRTGLFSATQTQAVEELAKAGLRNPVRVEVRAETKTDNDPSASKQLE-- 243
Query: 549 SFKTPLGLEME 581
S KTP GL +E
Sbjct: 244 SSKTPSGLHIE 254
Score = 29.3 bits (64), Expect(3) = 3e-08
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +2
Query: 308 IIYFCLGQILILDEADRLL--GSEKQIN 385
++ F +ILILDEADRLL G +KQ+N
Sbjct: 160 VLNFKSFEILILDEADRLLDMGFQKQLN 187
Score = 28.9 bits (63), Expect(3) = 3e-08
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
+K SQLVDFL KN + KII + M C C
Sbjct: 262 KKPSQLVDFLIKNRSRKII-------IYFMTCAC 288
>ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223539916|gb|EEF41494.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 592
Score = 52.8 bits (125), Expect(2) = 7e-10
Identities = 32/52 (61%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Frame = +1
Query: 124 RYK-IKIDAATGSGKTLAFVVPLVEILRRSSSQCKGMHLQTSFPLNETLDRS 276
RYK + +DAATGSGKTLAFVVPLVEILRR SS K +H L+ T + S
Sbjct: 54 RYKDVAVDAATGSGKTLAFVVPLVEILRRLSSPIK-LHQVMGIILSPTRELS 104
Score = 38.1 bits (87), Expect(2) = 7e-10
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 48 PPLSQPTLDAVTEVGFNYYTPVQSATI 128
PPLS+ + A+T+ GF Y TPVQ+ATI
Sbjct: 23 PPLSESVVHALTQAGFEYCTPVQAATI 49
>ref|XP_002312182.1| DEAD/DEAH box helicase family protein [Populus trichocarpa]
gi|222852002|gb|EEE89549.1| DEAD/DEAH box helicase
family protein [Populus trichocarpa]
Length = 592
Score = 51.6 bits (122), Expect(2) = 7e-10
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSS 216
+ +DAATGSGKTLAFVVPLVEILRRSSS
Sbjct: 58 VAVDAATGSGKTLAFVVPLVEILRRSSS 85
Score = 39.3 bits (90), Expect(2) = 7e-10
Identities = 16/37 (43%), Positives = 26/37 (70%)
Frame = +3
Query: 18 IRSVKLMAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ + + + P +S+P L+A+T GF+Y TPVQ+ATI
Sbjct: 13 LTNTRFSDLKPSISEPVLEALTNSGFDYCTPVQAATI 49
>ref|XP_003600976.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355490024|gb|AES71227.1| DEAD-box ATP-dependent RNA
helicase [Medicago truncatula]
Length = 659
Score = 50.1 bits (118), Expect(2) = 9e-10
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCKGMHLQTS 246
+ +DAATGSGKTLAFV+PLVEILRR++S K + +S
Sbjct: 55 VAVDAATGSGKTLAFVIPLVEILRRNASNPKPHQVPSS 92
Score = 40.4 bits (93), Expect(2) = 9e-10
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +3
Query: 18 IRSVKLMAMTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ S + + PPLS+P L A+T+ F++ TPVQ+ATI
Sbjct: 10 LTSTRFSDLKPPLSEPVLQALTDSNFDFCTPVQAATI 46
Score = 47.0 bits (110), Expect(3) = 9e-10
Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLR------YXXXXXXXXXXXAKDKLEPA 548
IN I+T K RT +FSAT T+AVEELAKAGLR + K+E
Sbjct: 209 INAIITELPKLRRTGLFSATQTQAVEELAKAGLRNPVRVEVRAETKTANDSASSKKIE-- 266
Query: 549 SFKTPLGLEME 581
S KTP GL++E
Sbjct: 267 SSKTPSGLQIE 277
Score = 33.1 bits (74), Expect(3) = 9e-10
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +2
Query: 290 FVKFYLIIYFCLGQILILDEADRLL--GSEKQIN 385
F F + + +G ILILDEADRLL G +KQIN
Sbjct: 177 FKSFEVYLLEKIGHILILDEADRLLDMGFQKQIN 210
Score = 29.6 bits (65), Expect(3) = 9e-10
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
+K SQLVDFL KN ++KII + M C C
Sbjct: 285 KKPSQLVDFLVKNRSKKII-------IYFMTCAC 311
>ref|XP_006399006.1| hypothetical protein EUTSA_v10013039mg [Eutrema salsugineum]
gi|557100096|gb|ESQ40459.1| hypothetical protein
EUTSA_v10013039mg [Eutrema salsugineum]
Length = 595
Score = 51.2 bits (121), Expect(3) = 1e-09
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXXAKDKLEPASFKTPL 566
+N I++R KQ RT +FSAT TE VEELAKAGLR ++ + + K P
Sbjct: 188 VNSIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAESKSEPSQQLTNSKIPS 247
Query: 567 GLEME 581
GL +E
Sbjct: 248 GLHLE 252
Score = 29.3 bits (64), Expect(3) = 1e-09
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM 642
+KSSQLVD L KN N+K+I+
Sbjct: 260 KKSSQLVDLLIKNENKKLIV 279
Score = 28.9 bits (63), Expect(3) = 1e-09
Identities = 14/21 (66%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQIN 385
+IL+LDEADRLL G +KQ+N
Sbjct: 169 EILVLDEADRLLEMGFQKQVN 189
Score = 47.8 bits (112), Expect(2) = 6e-07
Identities = 21/28 (75%), Positives = 27/28 (96%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSS 216
+ +DAATGSGKTLAF++PL+EILRRS+S
Sbjct: 56 VAVDAATGSGKTLAFLLPLIEILRRSTS 83
Score = 33.1 bits (74), Expect(2) = 6e-07
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 42 MTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ PPLS+ ++ + + GF + TPVQ+ATI
Sbjct: 19 LEPPLSEDIIEVLEKSGFEFCTPVQAATI 47
>ref|NP_196164.1| DEAD-box ATP-dependent RNA helicase 18 [Arabidopsis thaliana]
gi|75334017|sp|Q9FLB0.1|RH18_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 18
gi|10176757|dbj|BAB09988.1| ATP-dependent RNA
helicase-like protein [Arabidopsis thaliana]
gi|332003492|gb|AED90875.1| DEAD-box ATP-dependent RNA
helicase 18 [Arabidopsis thaliana]
Length = 593
Score = 53.1 bits (126), Expect(3) = 2e-09
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXXAKDKLEPASFKTPL 566
+N I++R KQ RT +FSAT TE VEELAKAGLR ++ + + KTP
Sbjct: 188 VNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPS 247
Query: 567 GLEME 581
GL +E
Sbjct: 248 GLHLE 252
Score = 28.1 bits (61), Expect(3) = 2e-09
Identities = 14/21 (66%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQIN 385
+ILILDEADRLL G ++Q+N
Sbjct: 169 EILILDEADRLLEMGFQRQVN 189
Score = 27.7 bits (60), Expect(3) = 2e-09
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM 642
+KSSQLVD L KN ++K+I+
Sbjct: 260 KKSSQLVDLLIKNSDKKLIV 279
Score = 50.4 bits (119), Expect(2) = 4e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSS 216
+ +DAATGSGKTLAFVVPLVEILRRS+S
Sbjct: 56 VAVDAATGSGKTLAFVVPLVEILRRSTS 83
Score = 31.2 bits (69), Expect(2) = 4e-07
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 42 MTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ PPLS ++A+ + F + TPVQ+ATI
Sbjct: 19 LEPPLSGDIIEALNQSDFEFCTPVQAATI 47
>ref|XP_006435808.1| hypothetical protein CICLE_v10031038mg [Citrus clementina]
gi|568865795|ref|XP_006486255.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 18-like isoform X1 [Citrus
sinensis] gi|557538004|gb|ESR49048.1| hypothetical
protein CICLE_v10031038mg [Citrus clementina]
Length = 589
Score = 50.8 bits (120), Expect(2) = 2e-09
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFVVPLVEILRR+SS K
Sbjct: 54 VAVDAATGSGKTLAFVVPLVEILRRASSARK 84
Score = 38.5 bits (88), Expect(2) = 2e-09
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 42 MTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ P LS+P L+A+ E GF + TPVQ+ATI
Sbjct: 17 LKPALSEPVLEALAEAGFEFCTPVQAATI 45
Score = 48.1 bits (113), Expect(3) = 4e-08
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGL----RYXXXXXXXXXXXAKDKLEPASF 554
I+ I++R K RT +FSAT TEAVEEL+KAGL R + + AS
Sbjct: 185 ISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 244
Query: 555 KTPLGLEME 581
KTPLGL +E
Sbjct: 245 KTPLGLHLE 253
Score = 28.5 bits (62), Expect(3) = 4e-08
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
EK SQLVD L KN ++KII + M C C
Sbjct: 261 EKPSQLVDLLIKNKSKKII-------IYFMTCAC 287
Score = 27.3 bits (59), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQIN 385
+IL+LDEADRLL G +KQI+
Sbjct: 166 EILVLDEADRLLDMGFQKQIS 186
>ref|XP_006486256.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like isoform X2
[Citrus sinensis]
Length = 537
Score = 50.8 bits (120), Expect(2) = 2e-09
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFVVPLVEILRR+SS K
Sbjct: 54 VAVDAATGSGKTLAFVVPLVEILRRASSARK 84
Score = 38.5 bits (88), Expect(2) = 2e-09
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 42 MTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ P LS+P L+A+ E GF + TPVQ+ATI
Sbjct: 17 LKPALSEPVLEALAEAGFEFCTPVQAATI 45
Score = 48.1 bits (113), Expect(3) = 4e-08
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGL----RYXXXXXXXXXXXAKDKLEPASF 554
I+ I++R K RT +FSAT TEAVEEL+KAGL R + + AS
Sbjct: 185 ISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 244
Query: 555 KTPLGLEME 581
KTPLGL +E
Sbjct: 245 KTPLGLHLE 253
Score = 28.5 bits (62), Expect(3) = 4e-08
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
EK SQLVD L KN ++KII + M C C
Sbjct: 261 EKPSQLVDLLIKNKSKKII-------IYFMTCAC 287
Score = 27.3 bits (59), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQIN 385
+IL+LDEADRLL G +KQI+
Sbjct: 166 EILVLDEADRLLDMGFQKQIS 186
>ref|XP_006435809.1| hypothetical protein CICLE_v10031038mg [Citrus clementina]
gi|557538005|gb|ESR49049.1| hypothetical protein
CICLE_v10031038mg [Citrus clementina]
Length = 503
Score = 50.8 bits (120), Expect(2) = 2e-09
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFVVPLVEILRR+SS K
Sbjct: 54 VAVDAATGSGKTLAFVVPLVEILRRASSARK 84
Score = 38.5 bits (88), Expect(2) = 2e-09
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 42 MTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ P LS+P L+A+ E GF + TPVQ+ATI
Sbjct: 17 LKPALSEPVLEALAEAGFEFCTPVQAATI 45
Score = 48.1 bits (113), Expect(3) = 4e-08
Identities = 31/69 (44%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGL----RYXXXXXXXXXXXAKDKLEPASF 554
I+ I++R K RT +FSAT TEAVEEL+KAGL R + + AS
Sbjct: 185 ISYIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAESKSHHVSASSQQLASS 244
Query: 555 KTPLGLEME 581
KTPLGL +E
Sbjct: 245 KTPLGLHLE 253
Score = 28.5 bits (62), Expect(3) = 4e-08
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
EK SQLVD L KN ++KII + M C C
Sbjct: 261 EKPSQLVDLLIKNKSKKII-------IYFMTCAC 287
Score = 27.3 bits (59), Expect(3) = 4e-08
Identities = 14/21 (66%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQIN 385
+IL+LDEADRLL G +KQI+
Sbjct: 166 EILVLDEADRLLDMGFQKQIS 186
>ref|XP_002871160.1| hypothetical protein ARALYDRAFT_908458 [Arabidopsis lyrata subsp.
lyrata] gi|297316997|gb|EFH47419.1| hypothetical protein
ARALYDRAFT_908458 [Arabidopsis lyrata subsp. lyrata]
Length = 593
Score = 52.8 bits (125), Expect(3) = 2e-09
Identities = 29/65 (44%), Positives = 38/65 (58%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXXAKDKLEPASFKTPL 566
+N I++R KQ RT +FSAT TE VEELAKAGLR ++ + + KTP
Sbjct: 188 VNYIISRLPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQFTNSKTPS 247
Query: 567 GLEME 581
GL +E
Sbjct: 248 GLHLE 252
Score = 28.1 bits (61), Expect(3) = 2e-09
Identities = 14/21 (66%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQIN 385
+ILILDEADRLL G ++Q+N
Sbjct: 169 EILILDEADRLLEMGFQRQVN 189
Score = 27.7 bits (60), Expect(3) = 2e-09
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM 642
+KSSQLVD L KN ++K+I+
Sbjct: 260 KKSSQLVDLLIKNSDKKLIV 279
Score = 50.4 bits (119), Expect(2) = 5e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSS 216
+ +DAATGSGKTLAFVVPLVEILRRS+S
Sbjct: 56 VAVDAATGSGKTLAFVVPLVEILRRSTS 83
Score = 30.8 bits (68), Expect(2) = 5e-07
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 42 MTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ PPLS ++A+ + F + TPVQ+ATI
Sbjct: 19 LEPPLSGNIIEALNQSDFEFCTPVQAATI 47
>ref|XP_006435811.1| hypothetical protein CICLE_v10033565mg [Citrus clementina]
gi|557538007|gb|ESR49051.1| hypothetical protein
CICLE_v10033565mg [Citrus clementina]
Length = 605
Score = 50.8 bits (120), Expect(2) = 3e-09
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 133 IKIDAATGSGKTLAFVVPLVEILRRSSSQCK 225
+ +DAATGSGKTLAFVVPLVEILRR+SS K
Sbjct: 54 VAVDAATGSGKTLAFVVPLVEILRRASSARK 84
Score = 38.1 bits (87), Expect(2) = 3e-09
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 42 MTPPLSQPTLDAVTEVGFNYYTPVQSATI 128
+ PPLS+ L+A+ E GF + TPVQ+ATI
Sbjct: 17 LKPPLSERVLEALAEAGFEFCTPVQAATI 45
Score = 48.5 bits (114), Expect(3) = 9e-08
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = +3
Query: 387 INPIVTR*LKQHRTSIFSATHTEAVEELAKAGLRYXXXXXXXXXXXAKDKLEPASFKTPL 566
I+ +++R K RT +FSAT TEAVEEL+KAGLR + AS KTPL
Sbjct: 185 ISYVISRLPKLRRTGLFSATQTEAVEELSKAGLR-------NPVRIEASSQQLASSKTPL 237
Query: 567 GLEME 581
GL +E
Sbjct: 238 GLHLE 242
Score = 27.3 bits (59), Expect(3) = 9e-08
Identities = 14/21 (66%), Positives = 18/21 (85%), Gaps = 2/21 (9%)
Frame = +2
Query: 329 QILILDEADRLL--GSEKQIN 385
+IL+LDEADRLL G +KQI+
Sbjct: 166 EILVLDEADRLLDMGFQKQIS 186
Score = 26.9 bits (58), Expect(3) = 9e-08
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 583 EKSSQLVDFLTKNMNEKIIM*VIQFQLPIMYCGC 684
+K SQLVD L KN ++KII + M C C
Sbjct: 250 KKPSQLVDLLIKNKSKKII-------IYFMACAC 276