BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00011531
         (3315 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr...   406   e-110
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   396   e-107
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   393   e-106
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   390   e-105
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr...   385   e-104
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia...   385   e-104
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr...   385   e-104
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr...   385   e-104
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   384   e-103
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   383   e-103
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   381   e-102
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309...   373   e-100
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   369   5e-99
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun...   365   7e-98
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s...   363   3e-97
ref|XP_002312652.1| RNA recognition motif-containing family prot...   354   1e-94
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu...   317   3e-83
ref|XP_002315647.1| RNA recognition motif-containing family prot...   317   3e-83
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A...   316   5e-83
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus...   286   6e-74

>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695488|ref|XP_007044903.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708837|gb|EOY00734.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 653

 Score =  406 bits (1044), Expect = e-110
 Identities = 233/492 (47%), Positives = 292/492 (59%), Gaps = 8/492 (1%)
 Frame = +1

Query: 241  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQ 417
            MD +AEEQ+D+GDEEYG +QKMQYQG GAI AL DEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 418  MHQSETQVPSGGVGNDG--HPKTEGAGSRVSESGPSRGVNL---KLDGRGSTNSGSSFPQ 582
            + +SE     GG+G+ G    K E    R  E+G S+G+N+    + G+   N  + +P+
Sbjct: 61   LQRSEAPPQPGGMGSTGLQAQKNEAPEPR-GEAGGSQGLNIPGVSVQGK-HLNVTARYPE 118

Query: 583  QNTGGLNFNKGPEEGTGDYSNGSA--PKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPN 756
            Q+  G      PE G+G Y +G++   KGR ME  +  QV NMGFQG ++A  K G DP+
Sbjct: 119  QD--GQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPS 176

Query: 757  QMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVG 936
             +P K +       + G    + A  +  N++  NVN P++S+N +RP ++NG TM+FVG
Sbjct: 177  GVPQKIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISENQVRPPIENGPTMLFVG 236

Query: 937  DLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFL 1116
            +LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVEFY+ ++AAACKEGM G++
Sbjct: 237  ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYM 296

Query: 1117 FNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXD 1296
            FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGRR P+D                 
Sbjct: 297  FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR-PND----GLGRGGNMNYQSG 351

Query: 1297 TGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQX 1476
              GRN+ +                             KNM+               Y Q 
Sbjct: 352  DAGRNYGR-GGWGRGGQGVVNRSGVGGPMRGRGGVGVKNMVGSSAGVGNGANGGAAYGQG 410

Query: 1477 XXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPG 1656
                            Q MMGAGFDPT                      +P +N +GL G
Sbjct: 411  PAGPPFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAG 470

Query: 1657 VAPHVNPAFFGR 1692
            VAPHVNPAFFGR
Sbjct: 471  VAPHVNPAFFGR 482



 Score = 60.1 bits (144), Expect = 7e-06
 Identities = 30/56 (53%), Positives = 35/56 (62%)
 Frame = +1

Query: 2029 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            +R+H               GQSSSRSR ++H M E+  RSRSRD DYGKRRRLPSE
Sbjct: 598  YREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  396 bits (1018), Expect = e-107
 Identities = 237/497 (47%), Positives = 289/497 (58%), Gaps = 13/497 (2%)
 Frame = +1

Query: 241  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQ 417
            MD +AEEQ+DY +EEYG +QKMQYQGGGAI AL DEELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 418  MHQSETQVPSGGVGNDG-HPKTEGAGSRVSESGPSRGVNL---KLDGRGSTNSGSSFPQQ 585
              Q E   PS GVGN     K      +  ++G S+G N+    ++G+  TN+G+ FP Q
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGK-YTNAGTHFPAQ 119

Query: 586  NTGGLNFNKGPEEGTGDYSNGSA--PKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQ 759
            N   +  N+ P  G+G+Y +G++   KG   E      V NMGFQGS + PP+ G DP+ 
Sbjct: 120  NDVQVAVNR-PNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSN 178

Query: 760  MPVKFSGATPLLPDPGI----DALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMI 927
            MP + +     + +PG      AL  A QM VN    NVNR +V++N IRP ++NG TM+
Sbjct: 179  MPGRVANEPAPVLNPGAAGPQGALIPANQMGVNI---NVNRAMVNENQIRPPLENGGTML 235

Query: 928  FVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMH 1107
            FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVEF++++AAAACK+GM+
Sbjct: 236  FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMN 295

Query: 1108 GFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXX 1287
            G +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q Q+Q QGRR  +D              
Sbjct: 296  GHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMND----GGGRGGNMNY 351

Query: 1288 XXDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMM--XXXXXXXXXXXXXN 1461
                GGRNF +                             KNMM                
Sbjct: 352  QSGDGGRNFGR-GGWGRGGQGVPNRGPGGGAMRGRGPMGAKNMMGSSSGAGSGAGPAAGG 410

Query: 1462 PYAQXXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNP 1641
             Y Q                 QNMMG GFDPT                      +P +N 
Sbjct: 411  GYGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNA 469

Query: 1642 MGLPGVAPHVNPAFFGR 1692
            MGL GVAPHVNPAFF R
Sbjct: 470  MGLAGVAPHVNPAFFNR 486


>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
            vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
            uncharacterized protein LOC100268141 isoform 2 [Vitis
            vinifera]
          Length = 647

 Score =  393 bits (1009), Expect = e-106
 Identities = 237/510 (46%), Positives = 292/510 (57%), Gaps = 10/510 (1%)
 Frame = +1

Query: 250  LAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQMHQ 426
            +AEEQLDY DEEYG +QKM +QGGGAISAL D+ELMGEDDEYDDLYNDVNVGEGF+QMH+
Sbjct: 1    MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 427  SETQVPSGGVGNDGHP----KTEGAGSRVSESGPSRGVNLKLDGRGSTNSGSSFPQQNTG 594
            SE   PSG +   G P    KT+    ++ E+G S+G+ +         S   F ++  G
Sbjct: 61   SEAPAPSGVMA--GGPFQAHKTDVPPQKL-EAGTSQGLIIPGVSIEGKYSNPHFHEKKEG 117

Query: 595  GLNFNKGPEEGTGDYSNGSA--PKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMPV 768
             +   KGPE G+  + +G +   KGR +E+    QV N+GFQGS   P K GA+P+ +  
Sbjct: 118  PMAV-KGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVHG 176

Query: 769  KFSGATPLLPDPGIDALRNAQQMQVNRVPGNVN--RPIVSDNPIRPAVDNGTTMIFVGDL 942
            K +  +  + + G    R   QM  N++  NVN  RP+V++N IRPAVDNG TM+FVG+L
Sbjct: 177  KIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGEL 236

Query: 943  HWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFLFN 1122
            HWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVEFY++SAAAACKEGM+G++FN
Sbjct: 237  HWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIFN 296

Query: 1123 GRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXDTG 1302
            GRACVVAFASPQ+LKQMGA+Y+NK   QAQ+Q QGRR  +D                   
Sbjct: 297  GRACVVAFASPQTLKQMGASYMNK--TQAQSQSQGRRPMND----GVGRGGGMNMQGGDA 350

Query: 1303 GRNFNK-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXX 1479
            GRN+ +                              KNM+               Y Q  
Sbjct: 351  GRNYGRGGWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMV---GNTAGVGASGGGYGQGL 407

Query: 1480 XXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPGV 1659
                           Q MMG+GFDPT                      +P +N MGL GV
Sbjct: 408  AGPTFGGPAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGV 467

Query: 1660 APHVNPAFFGRXXXXXXXXXXXXXXXEAHH 1749
            APHVNPAFFGR               + HH
Sbjct: 468  APHVNPAFFGRGMAANGMGMMGATGMDGHH 497



 Score = 68.9 bits (167), Expect = 1e-08
 Identities = 33/57 (57%), Positives = 39/57 (68%)
 Frame = +1

Query: 2026 GHRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            G+RDH               GQSSSRSRS++  + ++DHRSRSRDGDYGKRRRLPSE
Sbjct: 591  GYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 647


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  390 bits (1003), Expect = e-105
 Identities = 234/497 (47%), Positives = 288/497 (57%), Gaps = 13/497 (2%)
 Frame = +1

Query: 241  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQ 417
            MD +AEEQ+DY +EEYG +QKMQYQGGGAI AL DEELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 418  MHQSETQVPSGGVGNDG-HPKTEGAGSRVSESGPSRGVNL---KLDGRGSTNSGSSFPQQ 585
              Q E   PS GVGN     K      +  ++G S+G N+    ++G+  TN+G+ FP Q
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGK-YTNAGTHFPAQ 119

Query: 586  NTGGLNFNKGPEEGTGDYSNGSA--PKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQ 759
            N   +  N+ P  G+G+Y +G++   KG   E      V NMGFQGS + P + G DP+ 
Sbjct: 120  NDVQVAVNR-PNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSN 178

Query: 760  MPVKFSGATPLLPDPGI----DALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMI 927
            MP + +     + +PG      AL  A QM VN    NVNR +V++N IRP ++NG TM+
Sbjct: 179  MPGRVANEPAPVLNPGAAGPQGALIPANQMGVNI---NVNRAMVNENQIRPPLENGGTML 235

Query: 928  FVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMH 1107
            FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVEF++++AAAACK+GM+
Sbjct: 236  FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMN 295

Query: 1108 GFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXX 1287
            G +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q Q+Q QGRR  +D              
Sbjct: 296  GHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMND----GGGRGGNMNY 351

Query: 1288 XXDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMM--XXXXXXXXXXXXXN 1461
                GGRNF +                             +NM+                
Sbjct: 352  QSGDGGRNFGR-GGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGVGHAAGG 410

Query: 1462 PYAQXXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNP 1641
             Y Q                 QNMMG GFDPT                      +P +N 
Sbjct: 411  GYGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNA 469

Query: 1642 MGLPGVAPHVNPAFFGR 1692
            MGL GVAPHVNPAFF R
Sbjct: 470  MGLAGVAPHVNPAFFNR 486


>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
            gi|508708844|gb|EOY00741.1| RNA-binding family protein
            isoform 6 [Theobroma cacao]
          Length = 602

 Score =  385 bits (989), Expect = e-104
 Identities = 223/492 (45%), Positives = 284/492 (57%), Gaps = 8/492 (1%)
 Frame = +1

Query: 241  MDPLAEEQLDYGDEEYGS-QKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQ 417
            MD +AEEQ+D+GDEEYG  QKMQYQG GAI AL DEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 418  MHQSETQVPSGGVGNDG--HPKTEGAGSRVSESGPSRGVNL---KLDGRGSTNSGSSFPQ 582
            + +SE  +  GG+G+ G    + E    RV E+G S+G+N+    + G+    S     +
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 583  QNTGGLNFNKGPEEGTGDYSNGSA--PKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPN 756
            +    +N    PE  +G Y +GS+   KG   E     QV N+GFQG  +A  K G DP+
Sbjct: 120  EEQPAVN---RPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPS 176

Query: 757  QMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVG 936
             +P K +       + G    +    +  N++  NVN P++++N ++P ++NG TM+FVG
Sbjct: 177  GVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVG 236

Query: 937  DLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFL 1116
            +LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGYCQVEFY+ S+AA CKEGM+G++
Sbjct: 237  ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296

Query: 1117 FNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXD 1296
            FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGRR P++                 
Sbjct: 297  FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR-PNE----GLGRGGNLNYQSG 351

Query: 1297 TGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQX 1476
              GRN+ +                             KNM+               Y Q 
Sbjct: 352  DAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ- 409

Query: 1477 XXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPG 1656
                            Q MMGAGFDPT                      +P +N MGL G
Sbjct: 410  GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAG 469

Query: 1657 VAPHVNPAFFGR 1692
            VAPHVNPAFFGR
Sbjct: 470  VAPHVNPAFFGR 481


>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
            gi|508708843|gb|EOY00740.1| RNA-binding family protein
            isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  385 bits (989), Expect = e-104
 Identities = 223/492 (45%), Positives = 284/492 (57%), Gaps = 8/492 (1%)
 Frame = +1

Query: 241  MDPLAEEQLDYGDEEYGS-QKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQ 417
            MD +AEEQ+D+GDEEYG  QKMQYQG GAI AL DEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 418  MHQSETQVPSGGVGNDG--HPKTEGAGSRVSESGPSRGVNL---KLDGRGSTNSGSSFPQ 582
            + +SE  +  GG+G+ G    + E    RV E+G S+G+N+    + G+    S     +
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 583  QNTGGLNFNKGPEEGTGDYSNGSA--PKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPN 756
            +    +N    PE  +G Y +GS+   KG   E     QV N+GFQG  +A  K G DP+
Sbjct: 120  EEQPAVN---RPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPS 176

Query: 757  QMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVG 936
             +P K +       + G    +    +  N++  NVN P++++N ++P ++NG TM+FVG
Sbjct: 177  GVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVG 236

Query: 937  DLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFL 1116
            +LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGYCQVEFY+ S+AA CKEGM+G++
Sbjct: 237  ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296

Query: 1117 FNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXD 1296
            FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGRR P++                 
Sbjct: 297  FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR-PNE----GLGRGGNLNYQSG 351

Query: 1297 TGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQX 1476
              GRN+ +                             KNM+               Y Q 
Sbjct: 352  DAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ- 409

Query: 1477 XXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPG 1656
                            Q MMGAGFDPT                      +P +N MGL G
Sbjct: 410  GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAG 469

Query: 1657 VAPHVNPAFFGR 1692
            VAPHVNPAFFGR
Sbjct: 470  VAPHVNPAFFGR 481


>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
            gi|508708842|gb|EOY00739.1| RNA-binding family protein
            isoform 4 [Theobroma cacao]
          Length = 697

 Score =  385 bits (989), Expect = e-104
 Identities = 223/492 (45%), Positives = 284/492 (57%), Gaps = 8/492 (1%)
 Frame = +1

Query: 241  MDPLAEEQLDYGDEEYGS-QKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQ 417
            MD +AEEQ+D+GDEEYG  QKMQYQG GAI AL DEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 418  MHQSETQVPSGGVGNDG--HPKTEGAGSRVSESGPSRGVNL---KLDGRGSTNSGSSFPQ 582
            + +SE  +  GG+G+ G    + E    RV E+G S+G+N+    + G+    S     +
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 583  QNTGGLNFNKGPEEGTGDYSNGSA--PKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPN 756
            +    +N    PE  +G Y +GS+   KG   E     QV N+GFQG  +A  K G DP+
Sbjct: 120  EEQPAVN---RPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPS 176

Query: 757  QMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVG 936
             +P K +       + G    +    +  N++  NVN P++++N ++P ++NG TM+FVG
Sbjct: 177  GVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVG 236

Query: 937  DLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFL 1116
            +LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGYCQVEFY+ S+AA CKEGM+G++
Sbjct: 237  ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296

Query: 1117 FNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXD 1296
            FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGRR P++                 
Sbjct: 297  FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR-PNE----GLGRGGNLNYQSG 351

Query: 1297 TGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQX 1476
              GRN+ +                             KNM+               Y Q 
Sbjct: 352  DAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ- 409

Query: 1477 XXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPG 1656
                            Q MMGAGFDPT                      +P +N MGL G
Sbjct: 410  GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAG 469

Query: 1657 VAPHVNPAFFGR 1692
            VAPHVNPAFFGR
Sbjct: 470  VAPHVNPAFFGR 481



 Score = 60.1 bits (144), Expect = 7e-06
 Identities = 30/56 (53%), Positives = 35/56 (62%)
 Frame = +1

Query: 2029 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            +R+H               GQSSSRSR ++H M E+  RSRSRD DYGKRRRLPSE
Sbjct: 642  YREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 697


>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695496|ref|XP_007044905.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|590695500|ref|XP_007044906.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708839|gb|EOY00736.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708841|gb|EOY00738.1| RNA-binding family protein
            isoform 1 [Theobroma cacao]
          Length = 652

 Score =  385 bits (989), Expect = e-104
 Identities = 223/492 (45%), Positives = 284/492 (57%), Gaps = 8/492 (1%)
 Frame = +1

Query: 241  MDPLAEEQLDYGDEEYGS-QKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQ 417
            MD +AEEQ+D+GDEEYG  QKMQYQG GAI AL DEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 418  MHQSETQVPSGGVGNDG--HPKTEGAGSRVSESGPSRGVNL---KLDGRGSTNSGSSFPQ 582
            + +SE  +  GG+G+ G    + E    RV E+G S+G+N+    + G+    S     +
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 583  QNTGGLNFNKGPEEGTGDYSNGSA--PKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPN 756
            +    +N    PE  +G Y +GS+   KG   E     QV N+GFQG  +A  K G DP+
Sbjct: 120  EEQPAVN---RPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPS 176

Query: 757  QMPVKFSGATPLLPDPGIDALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVG 936
             +P K +       + G    +    +  N++  NVN P++++N ++P ++NG TM+FVG
Sbjct: 177  GVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVG 236

Query: 937  DLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFL 1116
            +LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGYCQVEFY+ S+AA CKEGM+G++
Sbjct: 237  ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296

Query: 1117 FNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXD 1296
            FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGRR P++                 
Sbjct: 297  FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR-PNE----GLGRGGNLNYQSG 351

Query: 1297 TGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQX 1476
              GRN+ +                             KNM+               Y Q 
Sbjct: 352  DAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ- 409

Query: 1477 XXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPG 1656
                            Q MMGAGFDPT                      +P +N MGL G
Sbjct: 410  GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAG 469

Query: 1657 VAPHVNPAFFGR 1692
            VAPHVNPAFFGR
Sbjct: 470  VAPHVNPAFFGR 481



 Score = 62.8 bits (151), Expect = 1e-06
 Identities = 30/56 (53%), Positives = 37/56 (66%)
 Frame = +1

Query: 2029 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            +R+H               GQSSSRSR ++H M E++HRSRSRD DYGK+RRLPSE
Sbjct: 597  YREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  384 bits (985), Expect = e-103
 Identities = 233/495 (47%), Positives = 285/495 (57%), Gaps = 14/495 (2%)
 Frame = +1

Query: 250  LAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQMHQ 426
            +AEEQ+DY ++EYG +QKMQYQGGGAI AL DEELMGEDDEYDDLYNDVNVG+G +Q  Q
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60

Query: 427  SETQVPSGGVGNDGHP--KTEGAGSRVSESGPSRGVNL---KLDGRGSTNSGSSFPQQNT 591
             E   PS GVGN      KT+    RV   G S+G N+    ++G+  TN+GS FP QN 
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGG-SQGSNIPGVSVEGK-YTNAGSHFPAQND 118

Query: 592  GGLNFNKGPEEGTGDYSNGSA--PKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMP 765
              +  N+ P  G+G+Y +G++   KG   E      V NMGFQGS + P + G DP+ MP
Sbjct: 119  VQVAVNR-PNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 177

Query: 766  VKFSGATPLLPDPGI----DALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFV 933
             + +     + +PG      AL  A QM VN    NVNR +V++N IRP ++NG TM+FV
Sbjct: 178  GRVANEPAPVLNPGAAGPQGALIPANQMGVN---ANVNRVMVNENQIRPPLENGGTMLFV 234

Query: 934  GDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGF 1113
            G+LHWWTTDAELE VLSQYGR KEIKFFDERASGKSKGYCQVEF++++AAAACK+GM+G 
Sbjct: 235  GELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 294

Query: 1114 LFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXX 1293
            +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q Q+Q QG R  +D                
Sbjct: 295  VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMND----GGGRGGNTNYQS 350

Query: 1294 DTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMM--XXXXXXXXXXXXXNPY 1467
              GGRNF +                             +NM+                 Y
Sbjct: 351  GDGGRNFGR-GGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGVGHAAGGGY 409

Query: 1468 AQXXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMG 1647
             Q                 QNMMG GFDPT                      +P +N MG
Sbjct: 410  GQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMG 468

Query: 1648 LPGVAPHVNPAFFGR 1692
            L GVAPHVNPAFF R
Sbjct: 469  LAGVAPHVNPAFFNR 483



 Score = 60.1 bits (144), Expect = 7e-06
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = +1

Query: 2086 GQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            GQSSSRSRS++  + ++DHRSRSRD DYGKRRRLPSE
Sbjct: 619  GQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
            gi|567891321|ref|XP_006438181.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540376|gb|ESR51420.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540377|gb|ESR51421.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  383 bits (984), Expect = e-103
 Identities = 232/495 (46%), Positives = 285/495 (57%), Gaps = 14/495 (2%)
 Frame = +1

Query: 250  LAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQMHQ 426
            +AEEQ+DY ++EYG +QKMQYQGGGAI AL DEELMGEDDEYDDLYND+NVG+G +Q  Q
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60

Query: 427  SETQVPSGGVGNDGHP--KTEGAGSRVSESGPSRGVNL---KLDGRGSTNSGSSFPQQNT 591
             E   PS GVGN      KT+    RV   G S+G N+    ++G+  TN+GS FP QN 
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGG-SQGSNIPGVSVEGK-YTNAGSDFPAQND 118

Query: 592  GGLNFNKGPEEGTGDYSNGSA--PKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMP 765
              +  N+ P  G+G+Y +G++   KG   E      V NMGFQGS + P + G DP+ MP
Sbjct: 119  VQVAVNR-PNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 177

Query: 766  VKFSGATPLLPDPGI----DALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFV 933
             + +     + +PG      AL  A QM VN    NVNR +V++N IRP ++NG TM+FV
Sbjct: 178  GRAANEPAPVLNPGAAGPQGALIPANQMGVN---ANVNRVMVNENQIRPPLENGGTMLFV 234

Query: 934  GDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGF 1113
            G+LHWWTTDAELE VLSQYGR KEIKFFDERASGKSKGYCQVEF++++AAAACK+GM+G 
Sbjct: 235  GELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 294

Query: 1114 LFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXX 1293
            +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q Q+Q QG R  +D                
Sbjct: 295  VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMND----GGGRGGNTNYQS 350

Query: 1294 DTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMM--XXXXXXXXXXXXXNPY 1467
              GGRNF +                             +NM+                 Y
Sbjct: 351  GDGGRNFGR-GGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGAGHAAGGGY 409

Query: 1468 AQXXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMG 1647
             Q                 QNMMG GFDPT                      +P +N MG
Sbjct: 410  GQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMG 468

Query: 1648 LPGVAPHVNPAFFGR 1692
            L GVAPHVNPAFF R
Sbjct: 469  LAGVAPHVNPAFFNR 483



 Score = 60.1 bits (144), Expect = 7e-06
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = +1

Query: 2086 GQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            GQSSSRSRS++  + ++DHRSRSRD DYGKRRRLPSE
Sbjct: 619  GQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  381 bits (978), Expect = e-102
 Identities = 227/490 (46%), Positives = 277/490 (56%), Gaps = 9/490 (1%)
 Frame = +1

Query: 250  LAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQMHQ 426
            +A+EQ+DY DEEYG +QK+QYQG GAI AL +EE MGEDDEYDDLYNDVN+GE F+QMH+
Sbjct: 1    MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQMHR 59

Query: 427  SETQVPSGGVGNDGHPKTEGAGSRVSESGPSRGVNLK---LDGRGSTNSGSSFPQQNTGG 597
            SE       VGN G         RV ESG S+G+N+    ++ + ST  G+ FP+QN   
Sbjct: 60   SEAPPAPPSVGNGGFQPRNSNDLRV-ESGGSQGLNIPGVAVESKYST--GTHFPEQNV-- 114

Query: 598  LNFNKGPEEGTGDYSNGS--APKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMPVK 771
                KGPE G+  Y +GS  A K R ME+    Q  NMGFQGS + P   G DP+ M  K
Sbjct: 115  ----KGPEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNK 170

Query: 772  FSGATPLLPDPGIDAL---RNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVGDL 942
             S     +P+ G+  +     A QM +N    + NR   ++N IRP ++NG+TM++VG+L
Sbjct: 171  ISNDPTPVPNAGVPRVIPQLPASQMNMNM---DTNRSATNENQIRPPLENGSTMLYVGEL 227

Query: 943  HWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFLFN 1122
            HWWTTDAELE VLSQYG VKEIKFFDERASGKSKGYCQVEFY+++AAAACKEGM+G LFN
Sbjct: 228  HWWTTDAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFN 287

Query: 1123 GRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXDTG 1302
            GRACVVAFAS Q+LKQMGA+Y+NK Q Q Q+Q QGRR  +D                   
Sbjct: 288  GRACVVAFASQQTLKQMGASYMNKNQGQPQSQNQGRRPMND----GAGRGGNMNYQGGDA 343

Query: 1303 GRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXX 1482
            GRNF +                                +               Y Q   
Sbjct: 344  GRNFGRGGWGRGGQGILNRGPGGGGRMGGRGGSMGAKNIVGGAGGVGSGANGGGYGQGLA 403

Query: 1483 XXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPGVA 1662
                          Q+MM AGFDPT                      +P +N MGL GVA
Sbjct: 404  GPAFGGPAGAMLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVA 463

Query: 1663 PHVNPAFFGR 1692
            PHVNPAFFGR
Sbjct: 464  PHVNPAFFGR 473



 Score = 63.2 bits (152), Expect = 8e-07
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = +1

Query: 2029 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            +RDH               GQSSSRSRS++  + E+D+RSRSRD DYGKRRRLPSE
Sbjct: 589  YRDHRQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644


>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
            subsp. vesca]
          Length = 646

 Score =  373 bits (957), Expect = e-100
 Identities = 222/508 (43%), Positives = 272/508 (53%), Gaps = 5/508 (0%)
 Frame = +1

Query: 241  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQ 417
            MDP+ EEQ+DY +EEYG +QK+QYQ  GAI AL DEE M EDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60

Query: 418  MHQSETQVPSGGVGNDGHPKTEGAGSRVSESGPSRGVNLKLDGRGSTNSG--SSFPQQNT 591
            MH+ E  +P  GVGN G    +   + V E     G + ++   G +  G  SS P+Q  
Sbjct: 61   MHRPEPPLPPAGVGNGG---LQAQKNNVPEQRVQGGASQEVKNPGFSVEGKYSSVPEQKD 117

Query: 592  GGLNFNKGPEEGTGDYSNGSAPKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMPVK 771
                     +         ++ KGR ME+    QV NMGFQG+AT      AD + +  K
Sbjct: 118  ---------QPPVSVVPEMASQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGK 168

Query: 772  FSGATPLLPDPGIDALRNAQQMQVNRVPG--NVNRPIVSDNPIRPAVDNGTTMIFVGDLH 945
             +       + G +     QQM  N++    NVNRP+V++N IRP V+NG+  +FVG+LH
Sbjct: 169  IANGPIPSMNSGSNGPPAVQQMPANQMNMKINVNRPMVNENQIRPPVENGSATLFVGELH 228

Query: 946  WWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFLFNG 1125
            WWTTDAELEGVLSQ+GR+KEIKFFDERASGKSKGYCQV+FY+ +AA+ACKEGM G++FNG
Sbjct: 229  WWTTDAELEGVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNG 288

Query: 1126 RACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXDTGG 1305
            RACVVAFAS Q+LKQMG +Y+NK+Q Q Q QPQGRR  +D                DT G
Sbjct: 289  RACVVAFASSQTLKQMGDSYVNKSQGQVQTQPQGRRPMND---GAGRGGNMNFQGGDT-G 344

Query: 1306 RNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXXX 1485
            RNF +                                M               Y Q    
Sbjct: 345  RNFGRGNNWGRGGQGVLNRGPGGGGPGRGRGAMGARNMVGNNAGVGTGANGGGYGQGLGG 404

Query: 1486 XXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPGVAP 1665
                           MMG GFDPT                     Q+PG+N MGL GVAP
Sbjct: 405  PGFGGPVGGMMNAPGMMGPGFDPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAP 464

Query: 1666 HVNPAFFGRXXXXXXXXXXXXXXXEAHH 1749
            HVNPAFFGR               E HH
Sbjct: 465  HVNPAFFGRGMATNGMGMMGSSGMEGHH 492



 Score = 63.2 bits (152), Expect = 8e-07
 Identities = 32/56 (57%), Positives = 35/56 (62%)
 Frame = +1

Query: 2029 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            +RDH               G SSSR RS++  M EDDHRSRSRD DYGKRRRLPSE
Sbjct: 591  YRDHRRRERDVAYEDDRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 646


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Solanum tuberosum]
            gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185-like
            isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  369 bits (947), Expect = 5e-99
 Identities = 219/493 (44%), Positives = 272/493 (55%), Gaps = 9/493 (1%)
 Frame = +1

Query: 241  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQ 417
            MDP A+EQLDYGDEEYG S KMQY G G I AL ++E+MGEDDEYDDLYNDVN+GEGF+Q
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60

Query: 418  MHQSETQVPSGGVGNDGHPKTEGAGSRVSESGPSRGVNLKLDGRGSTNSGSS----FPQQ 585
            + +SE  VPS   GN G+ + +      S +G       K+ G  +    +     FPQQ
Sbjct: 61   LQRSEVPVPSVDAGN-GNFQAQKDSFPASRAGGLGSEEAKIPGIATEGKYAGTEVQFPQQ 119

Query: 586  NTGGLNFNKGPEEGTGDYSNGSAPKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMP 765
               G    +   E   D +  + P    M +    Q GN G+QGS   P K GADP  MP
Sbjct: 120  K--GEPVVERETERPADAAQKARPSAITMTLNS--QAGNSGYQGSMPMPQKIGADPMAMP 175

Query: 766  VK-FSGATPLLPD--PGIDALRNAQQMQVNRVPG-NVNRPIVSDNPIRPAVDNGTTMIFV 933
             K  S ATPL+    PG   + +    Q+N     N+N P++S+ P RP+++NG TM+FV
Sbjct: 176  EKNASEATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFV 235

Query: 934  GDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGF 1113
            G+LHWWTTDAELE VL+QYG VKEIKFFDERASGKSKGYCQVEF++ ++AAACKEGM+G+
Sbjct: 236  GELHWWTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGY 295

Query: 1114 LFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXX 1293
             FNGRACVVAFA+PQ++KQMG++Y NK Q Q Q+QPQGRR  ++                
Sbjct: 296  NFNGRACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRRPMNE-----GVGRGGPNYTP 350

Query: 1294 DTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQ 1473
               GRNF +                             KNMM               + Q
Sbjct: 351  GDAGRNFGR-GSWGRGGPGMPNRGPGGGPVRGRGAMGSKNMM---VNPGAGNGAGGAFGQ 406

Query: 1474 XXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLP 1653
                             Q MMG GFDP+                      +  +NPMGLP
Sbjct: 407  GLAGPAFGGPPAGLMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLP 466

Query: 1654 GVAPHVNPAFFGR 1692
            GVAPHVNPAFFGR
Sbjct: 467  GVAPHVNPAFFGR 479



 Score = 63.5 bits (153), Expect = 6e-07
 Identities = 32/57 (56%), Positives = 37/57 (64%)
 Frame = +1

Query: 2026 GHRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            G+RD+               GQSSSRSRSK+   QE+DHRSRSRD +YGKRRR PSE
Sbjct: 592  GYRDYRQKERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
            gi|462422613|gb|EMJ26876.1| hypothetical protein
            PRUPE_ppa002814mg [Prunus persica]
          Length = 630

 Score =  365 bits (937), Expect = 7e-98
 Identities = 224/508 (44%), Positives = 275/508 (54%), Gaps = 8/508 (1%)
 Frame = +1

Query: 250  LAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQMHQ 426
            +AEEQ+DY DEEYG +QK+QYQG GAISAL DEE M EDDEYDDLYNDVNV EGF+QMH+
Sbjct: 1    MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60

Query: 427  SETQVPSGGVGNDG--HPKTEGAGSRVSE--SGPSRGVNLKLDGRGSTNSGSSFPQQNTG 594
            SE  +P GGVGN G    KT+   +RV    S  S+   + + G+ S+ + + FP+Q   
Sbjct: 61   SEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSS-AVAQFPEQQ-- 117

Query: 595  GLNFNKGPEEGTGDYSNGSAPKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMPVKF 774
                             G  P      + K P++G+ G+ GS T PP  G D + +  K 
Sbjct: 118  -----------------GQPP------VAKEPELGSTGY-GSTTMPPNVGGDSSDITGKT 153

Query: 775  SGATPLLPDPGIDALRNAQQMQVNRVP--GNVNRPIVSDNPIRPAVDNGTTMIFVGDLHW 948
            +  +    + G        QM  N++    N NRP+ ++N IRP V+NG+TM+FVG+LHW
Sbjct: 154  ALESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGELHW 213

Query: 949  WTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFLFNGR 1128
            WTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVEF++ +AA ACKEGM G+LFNGR
Sbjct: 214  WTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGR 273

Query: 1129 ACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXDTGGR 1308
            ACVVAFASPQ+LKQMGA+YL+K+Q Q Q+Q  GRR  ++                DTGGR
Sbjct: 274  ACVVAFASPQTLKQMGASYLSKSQGQTQSQQPGRRPMNE---GVGRGGGVNYQTGDTGGR 330

Query: 1309 NFNK-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXXX 1485
            NF +                              KNM                Y Q    
Sbjct: 331  NFGRGGWGRGGQGVANRGPGGGGPMRGRGGAMGAKNM--AGNPAGVGTGANGGYGQGLAG 388

Query: 1486 XXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPGVAP 1665
                         Q MMGAGFDPT                      +P +N MGL GVAP
Sbjct: 389  PGFGGPVGGMMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAP 448

Query: 1666 HVNPAFFGRXXXXXXXXXXXXXXXEAHH 1749
            HVNPAFFGR               + HH
Sbjct: 449  HVNPAFFGRGMATNGMGMMGSSGMDGHH 476



 Score = 65.1 bits (157), Expect = 2e-07
 Identities = 33/56 (58%), Positives = 36/56 (64%)
 Frame = +1

Query: 2029 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            +RDH               GQSSSR RS++  M EDDHRSRSRD DYGKRRRLPSE
Sbjct: 575  YRDHRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 630


>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
            notabilis]
          Length = 636

 Score =  363 bits (932), Expect = 3e-97
 Identities = 224/491 (45%), Positives = 275/491 (56%), Gaps = 10/491 (2%)
 Frame = +1

Query: 250  LAEEQLDYGDEEYG-SQKMQYQG-GGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQMH 423
            +AE+ +D+ DEEYG +QK QYQG GGAISAL DEELMG+DDEYDDLYNDVNVGEGF+Q+ 
Sbjct: 1    MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60

Query: 424  QSET-QVPSG-GVGNDGHPKTEGAGSRVSESGPSRGVNL---KLDGRGSTNSGSSFPQQN 588
            +SE   +P+  GVGN    +         E G S+  N+     +GR S+ +GS FP Q 
Sbjct: 61   RSEAPSLPAAAGVGNGLQAQKRNFPEPREEIGGSQQPNIPGVSAEGRFSS-AGSQFPGQQ 119

Query: 589  TGGLNFNKGPEEGTGDYSNGSAPKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMPV 768
             G L  +K  E G+  Y +G++   +G  +         GFQGS       G D + +P 
Sbjct: 120  DG-LKVDKKSEAGSMVYPDGASGSQKGRIVA--------GFQGSKPMLHSVGVDSSDIPG 170

Query: 769  KFSGATPLLPDPGIDALRNAQQMQVNR--VPGNVNRPIVSDNPIRPAVDNGTTMIFVGDL 942
            K        P+ G    R    MQ N+  V  NV+ PIV++N IRP+++NG+TM+FVG+L
Sbjct: 171  KMVNEPIQAPNSGGAGPRGILPMQGNQTTVNANVSHPIVNENQIRPSIENGSTMLFVGEL 230

Query: 943  HWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFLFN 1122
            HWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVE+Y+++AA ACKEGMHG +FN
Sbjct: 231  HWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHVFN 290

Query: 1123 GRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXDTG 1302
            GRACVVAFASPQ+LKQMGAAY++K QVQ Q+QPQGRR  +D                  G
Sbjct: 291  GRACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPIND----GVGRGGNPNFQSGDG 346

Query: 1303 GRNFNK-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXX 1479
            GRNF +                              KNM+               Y Q  
Sbjct: 347  GRNFGRGGWGRGGQGAPNRGPGSGGPMRGRGGAMGAKNMV-----GNNAGVGGGGYGQGL 401

Query: 1480 XXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPGV 1659
                           Q MMG GFDPT                      +P +N MG   V
Sbjct: 402  AGPPFGGPAGGMMNPQGMMGTGFDPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFAAV 461

Query: 1660 APHVNPAFFGR 1692
            APHVNPAFFGR
Sbjct: 462  APHVNPAFFGR 472



 Score = 62.8 bits (151), Expect = 1e-06
 Identities = 32/57 (56%), Positives = 37/57 (64%)
 Frame = +1

Query: 2026 GHRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            G RD+               GQSSSR RS++ ++QED HRSRSRD DYGKRRRLPSE
Sbjct: 580  GSRDYRPKERELDYEDDWDRGQSSSRLRSRSRVVQEDHHRSRSRDVDYGKRRRLPSE 636


>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222852472|gb|EEE90019.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 619

 Score =  354 bits (909), Expect = 1e-94
 Identities = 218/487 (44%), Positives = 264/487 (54%), Gaps = 11/487 (2%)
 Frame = +1

Query: 265  LDYGDEEYGSQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQMHQSETQVP 444
            +DY +EE    KMQYQG GAI AL +EE MGEDDEYDDLYNDVNVGE F+QMH SE   P
Sbjct: 1    MDYEEEE----KMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55

Query: 445  SGGVGNDGHPKTEGAGSRVSESGPSRGVNLKLDGRGS------TNSGSSFPQQNTGGLNF 606
               VGN G        SR+ E+G S+   L + G G       +N+ + FP+Q    +  
Sbjct: 56   PATVGNGGFQTRNAHESRI-ETGGSQA--LAITGGGPAVEGIYSNAKAHFPEQKQVAVAV 112

Query: 607  NK---GPEEGTGDYSNGSAPKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMPVKFS 777
                 GP +G+       A KGR +E+    QV NMGFQ S   PP  G DP+ M  K +
Sbjct: 113  EAQDVGPVDGSS-----VAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNA 167

Query: 778  GATPLLPDPGIDALRNAQQMQVNRV--PGNVNRPIVSDNPIRPAVDNGTTMIFVGDLHWW 951
                 LP  G    R A QMQVN++    +VNRP+V++N +RP ++NG+T ++VG+LHWW
Sbjct: 168  IEPEPLPITGSAGPRGAPQMQVNQMHMSADVNRPVVNENQVRPPIENGSTTLYVGELHWW 227

Query: 952  TTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFLFNGRA 1131
            TTDAELE   SQ+GRVKEIKFFDERASGKSKGYCQV+FYE++AAAACKEGM+G +FNGR 
Sbjct: 228  TTDAELESFASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRP 287

Query: 1132 CVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXDTGGRN 1311
            CVVAFASPQ+LKQMGA+Y+NK Q Q Q Q QGR   +D                  GGRN
Sbjct: 288  CVVAFASPQTLKQMGASYMNKTQGQPQTQSQGRGSMND----GAGRGGNANFQSGDGGRN 343

Query: 1312 FNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXXXXX 1491
            + +                             KNM                Y Q      
Sbjct: 344  YGR-GAWGRGGQGILNRGPGGGPMRGRGAMGPKNMAGNVAGVGSGANGGG-YGQGLAGPA 401

Query: 1492 XXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPGVAPHV 1671
                       Q MMGAGFDP                       +P +N MGL GVAPHV
Sbjct: 402  FGGPAGGMMPPQGMMGAGFDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHV 461

Query: 1672 NPAFFGR 1692
            NPAFF R
Sbjct: 462  NPAFFAR 468


>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
            gi|550329195|gb|ERP56065.1| hypothetical protein
            POPTR_0010s06150g [Populus trichocarpa]
          Length = 591

 Score =  317 bits (811), Expect = 3e-83
 Identities = 198/482 (41%), Positives = 244/482 (50%), Gaps = 6/482 (1%)
 Frame = +1

Query: 265  LDYGDEEYGSQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQMHQSETQVP 444
            +D+ +EE    KMQYQG GAI AL +EEL GEDDEYDDLYNDVNVGE F+QMH SE   P
Sbjct: 1    MDFEEEE----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55

Query: 445  SGGVGNDGHPKTEGAGSRVSESGP----SRGVNLKLDGRGSTNSGSSFPQQNTGGLNFNK 612
                GN G        SRV   G     + G  + ++G+ S N+G+ FP+Q   G+    
Sbjct: 56   PATAGNGGFQTRNAHESRVETGGSQVLATSGAGVAVEGKYS-NAGAHFPEQKQAGIG--- 111

Query: 613  GPEEGTGDYSNGSAPKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMPVKFSGATPL 792
                                  V+A  VG++G+   ++   K  A P  +P         
Sbjct: 112  ----------------------VEANDVGSIGYGDGSSVAQKGSAGPRGVP--------- 140

Query: 793  LPDPGIDALRNAQQMQVNRVPGN--VNRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAE 966
                         QMQVN++  N  VNRP+V++N +RP ++NG T ++VG+LHWWTTDAE
Sbjct: 141  -------------QMQVNQMNMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAE 187

Query: 967  LEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFLFNGRACVVAF 1146
            LE V SQYGRVKEIKFFDERASGKSKGYCQV+FYE++AAAACKEGM+  +FNGR CVVAF
Sbjct: 188  LESVASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAF 247

Query: 1147 ASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXDTGGRNFNKVX 1326
            AS Q+LKQMGA+Y++K Q Q Q Q QGR   +D                  GGRN+ +  
Sbjct: 248  ASAQTLKQMGASYMSKTQGQPQPQSQGRGSMND----GMGRGGNANYQSGDGGRNYGR-G 302

Query: 1327 XXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXXXXXXXXXX 1506
                                       KNM                Y Q           
Sbjct: 303  GWGRGGQGVLNRGPGGGPMRGRGGMGPKNMAGNVAGVGSGANGGG-YGQGIAGPAFGGPA 361

Query: 1507 XXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPGVAPHVNPAFF 1686
                  Q MMGAGFDP                       +P +N MGL GVAPHVNPAFF
Sbjct: 362  GGMMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFF 421

Query: 1687 GR 1692
             R
Sbjct: 422  AR 423


>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222864687|gb|EEF01818.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 573

 Score =  317 bits (811), Expect = 3e-83
 Identities = 198/482 (41%), Positives = 244/482 (50%), Gaps = 6/482 (1%)
 Frame = +1

Query: 265  LDYGDEEYGSQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQMHQSETQVP 444
            +D+ +EE    KMQYQG GAI AL +EEL GEDDEYDDLYNDVNVGE F+QMH SE   P
Sbjct: 1    MDFEEEE----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55

Query: 445  SGGVGNDGHPKTEGAGSRVSESGP----SRGVNLKLDGRGSTNSGSSFPQQNTGGLNFNK 612
                GN G        SRV   G     + G  + ++G+ S N+G+ FP+Q   G+    
Sbjct: 56   PATAGNGGFQTRNAHESRVETGGSQVLATSGAGVAVEGKYS-NAGAHFPEQKQAGIG--- 111

Query: 613  GPEEGTGDYSNGSAPKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMPVKFSGATPL 792
                                  V+A  VG++G+   ++   K  A P  +P         
Sbjct: 112  ----------------------VEANDVGSIGYGDGSSVAQKGSAGPRGVP--------- 140

Query: 793  LPDPGIDALRNAQQMQVNRVPGN--VNRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDAE 966
                         QMQVN++  N  VNRP+V++N +RP ++NG T ++VG+LHWWTTDAE
Sbjct: 141  -------------QMQVNQMNMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDAE 187

Query: 967  LEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHGFLFNGRACVVAF 1146
            LE V SQYGRVKEIKFFDERASGKSKGYCQV+FYE++AAAACKEGM+  +FNGR CVVAF
Sbjct: 188  LESVASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVAF 247

Query: 1147 ASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSDXXXXXXXXXXXXXXXXDTGGRNFNKVX 1326
            AS Q+LKQMGA+Y++K Q Q Q Q QGR   +D                  GGRN+ +  
Sbjct: 248  ASAQTLKQMGASYMSKTQGQPQPQSQGRGSMND----GMGRGGNANYQSGDGGRNYGR-G 302

Query: 1327 XXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXXXXXXXXXX 1506
                                       KNM                Y Q           
Sbjct: 303  GWGRGGQGVLNRGPGGGPMRGRGGMGPKNMAGNVAGVGSGANGGG-YGQGIAGPAFGGPA 361

Query: 1507 XXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXQYPGMNPMGLPGVAPHVNPAFF 1686
                  Q MMGAGFDP                       +P +N MGL GVAPHVNPAFF
Sbjct: 362  GGMMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAFF 421

Query: 1687 GR 1692
             R
Sbjct: 422  AR 423


>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
            gi|548855834|gb|ERN13697.1| hypothetical protein
            AMTR_s00049p00146760 [Amborella trichopoda]
          Length = 659

 Score =  316 bits (809), Expect = 5e-83
 Identities = 223/539 (41%), Positives = 262/539 (48%), Gaps = 36/539 (6%)
 Frame = +1

Query: 241  MDPLAEEQLDYGDEEYGS-QKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQ 417
            MDP+AEEQLDY DE+YG+ QKM +Q GGAISAL DEELMGEDDEYDDLYNDVNVG+GF+Q
Sbjct: 1    MDPMAEEQLDYEDEDYGANQKMPFQTGGAISALADEELMGEDDEYDDLYNDVNVGDGFMQ 60

Query: 418  MHQSETQVPSGGVGNDGHPKTEGAGSRVSESGPSRG------VNLKLDGRGSTNSGSSFP 579
              Q +  V    +GN      E   S    + P  G       + KL G    +   +F 
Sbjct: 61   SLQHQEPVQYESMGNGVQAPKEEPISTPPVNIPGVGHEEKGEKDAKLSGFSDLDQKKAFQ 120

Query: 580  QQNTGGLNFNKGPEEGTGDYSNGSAPKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPN- 756
            +Q +  L    G   G          K R  E V  PQ    GF+ +A APP  G+  N 
Sbjct: 121  EQASNQL---AGASSGL---------KIRVSEPVSEPQPQASGFR-NAPAPPAKGSGFNT 167

Query: 757  --------QMPVKFSGATPLL---PDPGIDALRNAQQMQVNRV--PGNVNRPIVSDNPIR 897
                    Q+    S A P +   P PGI A  NA    +NR+  PG      V D   R
Sbjct: 168  AGAMDANKQLAQTSSNAVPRVGPGPGPGIGAGPNAN---MNRMMGPGPNQAGAVIDTSAR 224

Query: 898  PAVDN-----------GTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSK 1044
               +N           G TM+FVG+L WWTTDAELE VLSQYGRVK++KFFDERASGKSK
Sbjct: 225  FGSENSNRLSHGGGESGNTMLFVGELQWWTTDAELESVLSQYGRVKDLKFFDERASGKSK 284

Query: 1045 GYCQVEFYESSAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQ 1224
            GYCQVEFY+ +AAAACKE M+G +FNGRACVVAFAS  +LKQ+   YLNK Q QAQAQ Q
Sbjct: 285  GYCQVEFYDPAAAAACKESMNGHVFNGRACVVAFASQHTLKQLTTNYLNKTQAQAQAQSQ 344

Query: 1225 GRRVPSDXXXXXXXXXXXXXXXXDTGGRNF-NKVXXXXXXXXXXXXXXXXXXXXXXXXXX 1401
            GRR  +D                  G RN+ NK+                          
Sbjct: 345  GRRPMND------GGGRAGGPSYQGGDRNYGNKMGWGRGNQGVPNRGQGPAGLRGRPGGL 398

Query: 1402 XXKNMMXXXXXXXXXXXXXNPYAQXXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXX 1581
              K M+             NPY Q                 Q MMG+GFDPT        
Sbjct: 399  TGKAMV-------GGPSGANPYGQALSAPPLGGPPGGLLHPQGMMGSGFDPTYGAHLGRG 451

Query: 1582 XXXXXXXXXXXXXQYPGMNPM---GLPGVAPHVNPAFFGRXXXXXXXXXXXXXXXEAHH 1749
                           P  +PM   GLPGVAPHVNPAFFGR               + HH
Sbjct: 452  SGYGGFSGPHFPGMLPSFSPMGTVGLPGVAPHVNPAFFGRGVSANGMGMMGSGAMDGHH 510



 Score = 63.5 bits (153), Expect = 6e-07
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = +1

Query: 2026 GHRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2196
            G+ DH               G++SSRSRSK+ MMQE+D RSRS+D DYGKRRR+PSE
Sbjct: 603  GYSDHRQRERDWDNEDDWDRGRTSSRSRSKSRMMQEEDQRSRSKDVDYGKRRRVPSE 659


>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
          Length = 639

 Score =  286 bits (731), Expect = 6e-74
 Identities = 165/345 (47%), Positives = 208/345 (60%), Gaps = 10/345 (2%)
 Frame = +1

Query: 241  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFIQ 417
            MDP+ +EQLDYGDEEYG +QKMQY  GGAI AL ++E++G+DDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60

Query: 418  MHQSETQVPSGGVGNDGHP--KTEGAGSRVSESGPSRGVNLKLDGRGSTNSGSSFPQQNT 591
            M +SE   PS  VGN+     K    G+R          N ++   GS            
Sbjct: 61   MQRSEAPPPSA-VGNNSFSISKNTAPGTRAEAIASQEVNNGRVGNEGSYAPNGVQLSDQK 119

Query: 592  GGLNFNKGPEEGTGDYSNGSAPKGRGMEIVKAPQVGNMGFQGSATAPPKFGADPNQMPVK 771
              L    GP +        ++ + R  E+  + Q  ++G+QGS     K   D       
Sbjct: 120  NNLTAVGGPAQPVD-----ASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSEN 174

Query: 772  FSGATPLLPDPGIDALRNAQQMQVN------RVPGNVNRPIVSDNPIRPAV-DNGTTMIF 930
              G    L  P   + +   Q   N       V  NVNR +  +  IRP+  +NG  MI+
Sbjct: 175  IVGEPASLVYPNTGSSKGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIY 234

Query: 931  VGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESSAAAACKEGMHG 1110
            VG+LHWWTTDAE+E VL QYGRVKEIKFFDERASGKSKGYCQVEFY+ +AA ACK+GM G
Sbjct: 235  VGELHWWTTDAEVESVLIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQG 294

Query: 1111 FLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPSD 1245
             +FNGRACVV +A+PQ+ KQMGA+Y NK Q Q+Q+Q QGR   +D
Sbjct: 295  HIFNGRACVVTYANPQTSKQMGASY-NKNQGQSQSQLQGRNPMND 338