BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00011372
         (2169 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266...   170   3e-39
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   159   4e-36
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...   156   3e-35
emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]   156   4e-35
emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]   149   5e-33
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   147   3e-32
emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera]   147   3e-32
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   146   4e-32
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...   145   6e-32
emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera]   143   3e-31
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]     141   1e-30
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...   141   1e-30
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc...   138   9e-30
gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indi...   136   3e-29
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   136   3e-29
emb|CAN69706.1| hypothetical protein VITISV_037595 [Vitis vinifera]   136   4e-29
gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subc...   136   4e-29
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group...   136   4e-29
gb|AAC02666.1| polyprotein [Arabidopsis thaliana]                     136   4e-29
gb|AAC02672.1| polyprotein [Arabidopsis arenosa]                      136   4e-29

>ref|XP_004252705.1| PREDICTED: uncharacterized protein LOC101266915 [Solanum
            lycopersicum]
          Length = 544

 Score =  170 bits (430), Expect = 3e-39
 Identities = 105/282 (37%), Positives = 141/282 (50%), Gaps = 6/282 (2%)
 Frame = +3

Query: 1338 PNNFFPPTPPIRYNYYIECQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDD 1517
            P N  PP    R +  I CQIC KP H    C Y     D Y P       Q +      
Sbjct: 271  PTNTNPPRSSNRSSPRIICQICEKPNHHARNC-YNRNNMDTYPPTRSSNRPQANMVTPST 329

Query: 1518 FWCPEPEAFDVYNDASTSTSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGL 1697
                 P A            + W  DSGAT+H+TSDLS +++H +Y G D + +GNG  L
Sbjct: 330  NSMMSPSAI---------IDNSWFADSGATNHVTSDLSQLSIHMDYNGEDQLALGNGQKL 380

Query: 1698 NITLIGSSLIN-ADCKFTLSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSS 1874
            +I  IGSS ++ A     L+ +LHVPSIT++++ V QFTK+NN F EFH    +VKD   
Sbjct: 381  SINHIGSSKLSCATRPLHLNKILHVPSITKSLLSVSQFTKDNNVFMEFHPSCCFVKD-PQ 439

Query: 1875 HKVLLTGPVRDGLYHME-----FTASQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSS 2039
             K+LL G + DGLY  +       +S    A           H +LG P  + LR ++SS
Sbjct: 440  GKILLRGSIDDGLYRFDGGGLPVISSSTPRAFVISRASLQAWHERLGHPHEQLLRRLVSS 499

Query: 2040 VNAVIDSHLSATVCSSCQLDKSHALPFPSSSTIVYGPLDLIH 2165
             N  + S+    VC SCQL KSH +P  SSS+    P DL++
Sbjct: 500  FNLPVTSNKMPAVCGSCQLGKSHRIPLASSSSRSSFPFDLVY 541



 Score = 73.9 bits (180), Expect = 3e-10
 Identities = 57/215 (26%), Positives = 97/215 (45%)
 Frame = +3

Query: 330 TSNSSMAEINKHIPLTVKPPSKLTTTSYPLWKSQIVPLLRSYNLFRFVDGSFYCPVKYHR 509
           +++ S+ + N  I      P KL   +Y LW+S +     +++L   +DG+         
Sbjct: 19  STHLSITDSNSQIIALPGLPIKLDCGNYYLWQSTVYSAFEAFDLEGHLDGT--------- 69

Query: 510 KTSPAGQKIVTTDGFVDTDPDNEFVFNLMYNY*VNQDQAILSWLFIACVEETHSQVLDCT 689
             SP+   + TT    DT        N  +     +D+  L WL           ++   
Sbjct: 70  -NSPSATILTTTQ---DTSASTT---NPAFTAWKKRDKIPLLWLKTTTNHSIIPYIMHIR 122

Query: 690 YSHEIWIRLEHNYNATTKSRLMQLKTDLVHLNKSSESMLAYFDRARSISHKLVQIDRSIS 869
            + E W  L + Y + +++R+MQL+  L    K S +++ Y D+ R+ISH L    R I+
Sbjct: 123 TTREAWSYLSNLYQSQSRARVMQLRHQLQTTTKGSSTIMDYVDKKRTISHSLALAARPIT 182

Query: 870 DEDLVFHILQGLPTEFNAFKTSITTQQLKNDNLIT 974
           DE+L+  IL  L + +  F++SI       DNL T
Sbjct: 183 DEELMSAILFTLDSSYGPFRSSINPHL---DNLTT 214


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  159 bits (403), Expect = 4e-36
 Identities = 100/293 (34%), Positives = 141/293 (48%), Gaps = 22/293 (7%)
 Frame = +3

Query: 1353 PPTPPIRYNYYIECQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPE 1532
            PP      N    CQ+C K GH   +C Y +     +    + +S      AY  F    
Sbjct: 297  PPWNSDNQNEKPACQLCGKIGHVVAQCYYRF--DHTFQVPQNLSSRNSSPRAYYSF---S 351

Query: 1533 PEAFDVYNDASTSTSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLI 1712
            P+   V   +   +   W PDSGA++H+T +  N+   +E+ G + V VGNG+GL+I  I
Sbjct: 352  PQVNGVIPTSEVFSDDNWYPDSGASNHVTPNPENLMKSAEFAGQNQVHVGNGTGLSIKHI 411

Query: 1713 GSSLINADCK---FTLSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKV 1883
            G S   +        L+++LHVPSIT+N++ V +F K+N  FFEFH D  +VKD  +  V
Sbjct: 412  GQSEFLSPFSSKPLLLNHLLHVPSITKNLLSVSKFAKDNKVFFEFHSDSCFVKDQVTQAV 471

Query: 1884 LLTGPVRDGLY-----HMEFTASQ--------------LKHALXXXXXXXXLCHNKLGQP 2006
            L+ G VRDGLY     H+    +Q               K           L H +LG P
Sbjct: 472  LMVGKVRDGLYAFDSSHLALRPTQSLSKSPSVVASSFSSKVCTTSLSSTFDLWHKRLGHP 531

Query: 2007 SYKTLRHVLSSVNAVIDSHLSATVCSSCQLDKSHALPFPSSSTIVYGPLDLIH 2165
            S  T+++VLS  N    + + +  CSSC L K H  PF  S T    PL+LIH
Sbjct: 532  SAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIH 584


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score =  156 bits (395), Expect = 3e-35
 Identities = 97/271 (35%), Positives = 137/271 (50%), Gaps = 11/271 (4%)
 Frame = +3

Query: 1389 ECQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDAST 1568
            +CQIC K GH  TEC + +   + + P+A + S+QF   A D      P+A         
Sbjct: 313  QCQICCKIGHVATECWHRF--DNQFQPKASH-SNQFSSSAQD------PQALMAAPGLLG 363

Query: 1569 STSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIG-SSLINADCKF 1745
             T   W  D+GATHH+TSDL+N++LH+ + G D V VGNG GL +   G SS+  +    
Sbjct: 364  ETP--WFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHTGHSSIPTSQGAL 421

Query: 1746 TLSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHME 1925
             L NVLHVP I  N++ V +   +NN + EF+   F VKD  +  +LL G +  GLY + 
Sbjct: 422  LLKNVLHVPKIAANLVSVQKLCHDNNAYVEFYPSYFAVKDQKTQAILLKGGLDKGLYSVP 481

Query: 1926 FTASQ----------LKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVNAVIDSHLSAT 2075
               S              +         L HN+LG PS   +  VL+  N  + S  +  
Sbjct: 482  SAYSSHAPQARVFQIFSTSSSTSIDSMRLWHNRLGHPSLAIVNKVLNHYNLPVFSLQNKL 541

Query: 2076 VCSSCQLDKSHALPFPSSSTIVYGPLDLIHS 2168
            +C SCQL KSH LPF  + +    P DL+H+
Sbjct: 542  LCDSCQLAKSHKLPFVRNYSKAMKPFDLVHA 572



 Score = 80.9 bits (198), Expect = 2e-12
 Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 5/221 (2%)
 Frame = +3

Query: 300 QNPKFQIQFKTSNSSMAEINKHIP-----LTVKPPSKLTTTSYPLWKSQIVPLLRSYNLF 464
           QN   +    T  +    IN ++P     LT+K    L   ++ +W++Q++ ++ +    
Sbjct: 16  QNLGSEHSANTMATQTTGINSNLPTFGQTLTIK----LDRNNFLIWRNQLLNIVVANGYE 71

Query: 465 RFVDGSFYCPVKYHRKTSPAGQKIVTTDGFVDTDPDNEFVFNLMYNY*VNQDQAILSWLF 644
             ++G+  CP ++   T  A     TT G V  +P+        Y     Q++ ++SW++
Sbjct: 72  DILEGTRSCPYQWIAVTDTAS----TTHGSVILNPE--------YVLWQRQNRLVMSWIY 119

Query: 645 IACVEETHSQVLDCTYSHEIWIRLEHNYNATTKSRLMQLKTDLVHLNKSSESMLAYFDRA 824
            +  E+  +Q++    + EIW  L  +Y + +++R+M+L+  L    K   S++ Y  R 
Sbjct: 120 SSLTEQMMTQIMAYNSACEIWTALRESYASASRARIMELRLQLQTTRKGGLSVMDYMLRI 179

Query: 825 RSISHKLVQIDRSISDEDLVFHILQGLPTEFNAFKTSITTQ 947
           + I   L  I  S+S +D V  +L GL +E+N    SIT++
Sbjct: 180 QHICDHLRAIGESVSIDDQVMAVLAGLGSEYNPIVASITSR 220


>emb|CAN77680.1| hypothetical protein VITISV_040762 [Vitis vinifera]
          Length = 590

 Score =  156 bits (394), Expect = 4e-35
 Identities = 91/241 (37%), Positives = 134/241 (55%), Gaps = 5/241 (2%)
 Frame = +3

Query: 1461 YMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDASTSTSSG---WVPDSGATHHITSDLS 1631
            Y P++ Y   Q H   Y    CP+ +  D   + +T+TSS    W+ DS A+H+ITS +S
Sbjct: 257  YPPRSQYCDQQGHIAKY----CPKLKPSDATVNCTTTTSSPNKRWLIDSAASHNITSQVS 312

Query: 1632 NINLHSEYQGHDHVRVGNGSGLNITLIGSSLIN-ADCKFTLSNVLHVPSITRNIIFVHQF 1808
            N+  HSEY G D V +G+GSGL IT  GS  ++  + KF + + L VP+I +N+I VH F
Sbjct: 313  NLQFHSEYDGTDEVIIGDGSGLPITHSGSLTLSFPNRKFQVEDTLCVPTINKNLISVHHF 372

Query: 1809 TKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHMEFTASQLKHALXXXXXXXXLCH 1988
            TK+NN   EFH   F VKD  + ++LL GP  +G+Y M  + +    A           H
Sbjct: 373  TKQNNVILEFHPTYFLVKDRRTGEILLQGPCENGVYPMPSSPAATPIAFVHERTSVTGWH 432

Query: 1989 NKLGQPSYKTLRHVLSSVNAVIDSHLS-ATVCSSCQLDKSHALPFPSSSTIVYGPLDLIH 2165
             +LG PS+K +  ++SS +    S LS +  C SC ++K+H LPF         P DL++
Sbjct: 433  QRLGHPSFKVVTRLISSFSLPTTSCLSGSNNCHSCSINKAHQLPFHKHGLTSTTPFDLLY 492

Query: 2166 S 2168
            +
Sbjct: 493  T 493



 Score = 84.3 bits (207), Expect = 2e-13
 Identities = 52/195 (26%), Positives = 91/195 (46%)
 Frame = +3

Query: 366 IPLTVKPPSKLTTTSYPLWKSQIVPLLRSYNLFRFVDGSFYCPVKYHRKTSPAGQKIVTT 545
           I  T +  ++LT T++P W +Q   LL  YNLF +VDG+  CP               +T
Sbjct: 13  INATQQITARLTPTNFPSWNAQFESLLLGYNLFGYVDGTHTCP-----------PLPTST 61

Query: 546 DGFVDTDPDNEFVFNLMYNY*VNQDQAILSWLFIACVEETHSQVLDCTYSHEIWIRLEHN 725
           D    T           ++    QD+ ILS +  +        +     SH+ W +L   
Sbjct: 62  DAAATT----------AHHLWFRQDKLILSAILTSVSPAVIPLIATSKTSHQAWTKLTKL 111

Query: 726 YNATTKSRLMQLKTDLVHLNKSSESMLAYFDRARSISHKLVQIDRSISDEDLVFHILQGL 905
           Y + +++R+MQLK DL  + + + S+  Y    ++I+ +L  ID  +S +D+  ++L GL
Sbjct: 112 YASRSRTRVMQLKEDLTLMQRGNRSITEYLHSVKTIADELALIDAPLSQDDITLYVLHGL 171

Query: 906 PTEFNAFKTSITTQQ 950
            ++F      I  ++
Sbjct: 172 GSDFRDIVAPIRARE 186


>emb|CAN83506.1| hypothetical protein VITISV_027576 [Vitis vinifera]
          Length = 1172

 Score =  149 bits (376), Expect = 5e-33
 Identities = 98/273 (35%), Positives = 148/273 (54%), Gaps = 2/273 (0%)
 Frame = +3

Query: 1356 PTPPIRYNYYIECQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEP 1535
            P P + Y     CQIC   GH+T  C     PS   +P    T++     A  +  C +P
Sbjct: 174  PKPYLGY-----CQICRNQGHTTKRC-----PSFRLIPIETSTNTS---TATPNSSC-QP 219

Query: 1536 EAFDVYNDASTSTSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIG 1715
            +A    N ++T T   W+ DSGA+HHITSDLSN+++H+ Y G D + + +G+GL IT  G
Sbjct: 220  KAHFAANTSNTPT---WLLDSGASHHITSDLSNLSIHAPYNGSDDIMIDDGTGLPITHTG 276

Query: 1716 S-SLINADCKFTLSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLT 1892
            S SL  ++ +F+L+NVL VP + +N+I + +    NN    F    F VKDL +   LL 
Sbjct: 277  SLSLHTSNAQFSLTNVLCVPGMKKNLISISKLXISNNVSITFLPSSFLVKDLRTGATLLK 336

Query: 1893 GPVRDGLYHMEFTASQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVN-AVIDSHLS 2069
            G  +DG+Y  E+  S    A           H++LG P++  L+HV+S+ N A+  S L 
Sbjct: 337  GKTKDGVY--EWLVSSPLLAFSSVKTSSSEWHHRLGHPAFPILKHVISTNNLALSSSSLL 394

Query: 2070 ATVCSSCQLDKSHALPFPSSSTIVYGPLDLIHS 2168
               C++C  +KSH L F +S+     PL +++S
Sbjct: 395  HFSCNTCHCNKSHKLSFSNSTINSSRPLQILYS 427


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  147 bits (370), Expect = 3e-32
 Identities = 88/262 (33%), Positives = 129/262 (49%), Gaps = 3/262 (1%)
 Frame = +3

Query: 1392 CQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDASTS 1571
            CQ+C + GH+   C Y +   +NY+P     +S  H                        
Sbjct: 282  CQVCSRVGHTALNCWYRF--DENYVPDQRSANSAAH---------------------QNG 318

Query: 1572 TSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINADCK-FT 1748
            ++  W  D+GAT HIT DL  + +H +Y G D +   NG+G+ I+ IG++++    +   
Sbjct: 319  SNVPWYTDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGMTISNIGNAIVPTSSRSLH 378

Query: 1749 LSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHM-E 1925
            L +VLHVPS  +N+I VH+ T +N+ F EFH   F +KD  +  VLL G  RDGLY +  
Sbjct: 379  LRSVLHVPSTHKNLISVHRLTNDNDVFIEFHSSHFLIKDRQTKAVLLHGKCRDGLYPLPP 438

Query: 1926 FTASQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVNAVIDSHLSAT-VCSSCQLDK 2102
                +LKH            H +LG PS   +  V+S+ N    S+ S T VC +C   K
Sbjct: 439  HPDLRLKHNFSSTRVPLEHWHKRLGHPSRDIVHRVISNNNLPCLSNNSTTSVCDACLQAK 498

Query: 2103 SHALPFPSSSTIVYGPLDLIHS 2168
            +H LP+  S +    PL LI S
Sbjct: 499  AHQLPYTISMSQSSAPLMLIFS 520



 Score = 85.5 bits (210), Expect = 9e-14
 Identities = 52/185 (28%), Positives = 89/185 (48%)
 Frame = +3

Query: 393 KLTTTSYPLWKSQIVPLLRSYNLFRFVDGSFYCPVKYHRKTSPAGQKIVTTDGFVDTDPD 572
           KLT  +Y LWK+Q++P +R+  L   + G   CP K     S A  + VT          
Sbjct: 23  KLTKGNYLLWKAQVLPAIRAAQLDDILTGVEICPPK---TISDASDRTVT---------- 69

Query: 573 NEFVFNLMYNY*VNQDQAILSWLFIACVEETHSQVLDCTYSHEIWIRLEHNYNATTKSRL 752
              V N  Y   + +DQA+L +L  +   E  S V++C+ S  +W  L   Y++ +++R 
Sbjct: 70  ---VANPAYGRWIARDQAVLGYLLSSLSREVLSSVVNCSTSASVWTTLSEMYSSHSRARK 126

Query: 753 MQLKTDLVHLNKSSESMLAYFDRARSISHKLVQIDRSISDEDLVFHILQGLPTEFNAFKT 932
           +  +  L    K + S+  YF + R  + +L    + + DE+ V  +L GL  +FN   T
Sbjct: 127 VNTRIALATTKKGASSVAEYFAKMRGFADELGAAGKPLDDEEFVSFLLTGLDEDFNPLVT 186

Query: 933 SITTQ 947
           ++  +
Sbjct: 187 AVVAR 191


>emb|CAN79733.1| hypothetical protein VITISV_016615 [Vitis vinifera]
          Length = 807

 Score =  147 bits (370), Expect = 3e-32
 Identities = 95/271 (35%), Positives = 142/271 (52%), Gaps = 4/271 (1%)
 Frame = +3

Query: 1362 PPIRYNYYIECQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEA 1541
            PP R  Y   CQIC   GH+   C     PS   +P    T +    +     W P    
Sbjct: 14   PPSRL-YQGFCQICGIQGHTAKRC-----PSFQVLPIQSSTIAPSSSNNSTAPWQPRVN- 66

Query: 1542 FDVYNDASTSTSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSS 1721
               +    TS +  W+ DSGA+HH+T+DL+N++LHS Y G D V + +G+GL+IT +GS+
Sbjct: 67   ---FATNRTSPNPTWLLDSGASHHVTADLNNLSLHSPYNGIDDVMIRDGTGLSITHMGST 123

Query: 1722 LINA-DCKFTLSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGP 1898
             +++    FTLS V  VP++ +N+I + QF   NN   EF    F+VKDL S  +L  G 
Sbjct: 124  TLSSPQSTFTLSYVFCVPTMKKNLISISQFCITNNALVEFLLSSFFVKDLRSGAILFQGS 183

Query: 1899 VRDGLYHMEFTASQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVNAVIDSHLSAT- 2075
             +DG+Y      + +  A           H++LG P+   L+H+LS  N+ ++S  S   
Sbjct: 184  TKDGVYEWTTPKNPIL-AFSTAKITSINWHHRLGHPALPILQHILS--NSCLESSSSMPK 240

Query: 2076 --VCSSCQLDKSHALPFPSSSTIVYGPLDLI 2162
               C++C  +KSH LPF +SS +   PL +I
Sbjct: 241  DFSCTACLYNKSHKLPFSTSSLVSTHPLQII 271


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  146 bits (368), Expect = 4e-32
 Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 3/262 (1%)
 Frame = +3

Query: 1392 CQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDASTS 1571
            CQ+C K GH   +C Y Y   +N++P +   ++                       AS  
Sbjct: 1242 CQLCGKIGHVVADCWYRY--DENFIPDSKTAAA-----------------------ASYG 1276

Query: 1572 TSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINAD-CKFT 1748
              + W  D+GAT HIT +L  +  H +Y G + +   +G+G++I  +G S+I+   C   
Sbjct: 1277 VDTNWYMDTGATDHITGELDKLTTHEKYNGKEQIHTASGAGMDIKHVGHSIIHTPICNIQ 1336

Query: 1749 LSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHMEF 1928
            L N+LHVP   +N+I  H+   +N+ F E H   F +KD  +  +LL GP R+GLY +  
Sbjct: 1337 LKNILHVPKAEKNLISAHRLAVDNHAFVEVHPRFFAIKDQVTKNLLLRGPCRNGLYPLPT 1396

Query: 1929 TA-SQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVNAVIDSHLSAT-VCSSCQLDK 2102
            ++ +  K  L          H++LG PS   ++ V+SS N      ++ + VC++CQ  K
Sbjct: 1397 SSLATSKQVLGAIKPTMSRWHSRLGHPSLAIVQKVVSSNNLPCLGDVNESGVCNACQQAK 1456

Query: 2103 SHALPFPSSSTIVYGPLDLIHS 2168
            SH LP+P S ++   PL+L+ S
Sbjct: 1457 SHQLPYPKSFSVSNNPLELVFS 1478


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1460

 Score =  145 bits (367), Expect = 6e-32
 Identities = 81/261 (31%), Positives = 134/261 (51%), Gaps = 2/261 (0%)
 Frame = +3

Query: 1392 CQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDASTS 1571
            CQ+C K GH+  +C Y Y   ++Y+P A + ++                A + Y      
Sbjct: 278  CQVCFKRGHTAADCWYRY--DEDYVPDAKHVAAA---------------AVNSYG----- 315

Query: 1572 TSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINA--DCKF 1745
              + W  D+GAT H+T +L  + +  +Y G + +   +G+G++I+ IG ++++       
Sbjct: 316  VDTNWYIDTGATDHVTGELDKLTMKEKYNGGEQIHTASGAGMDISHIGHAIVHNPNSRNI 375

Query: 1746 TLSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHME 1925
             L NVL+VP   +N++ VH+   +N+ F E H D F++KD  + K LL G     LY + 
Sbjct: 376  HLRNVLYVPQAKKNLVSVHRLVNDNSAFLELHRDYFFLKDQITRKTLLKGRSWRRLYPLP 435

Query: 1926 FTASQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVNAVIDSHLSATVCSSCQLDKS 2105
               S LK A           H++LG PS  T++ V++  +       S +VC++CQ  KS
Sbjct: 436  H--SSLKQAYSAIKLSLDRWHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKS 493

Query: 2106 HALPFPSSSTIVYGPLDLIHS 2168
            H LPFP SS++   PL+L+ S
Sbjct: 494  HQLPFPISSSVSKHPLELVFS 514



 Score = 61.2 bits (147), Expect = 2e-06
 Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 2/193 (1%)
 Frame = +3

Query: 333 SNSSMAEINKHIPLTVKPPS-KLTTTSYPLWKSQIVPLLRSYNLFRFVDGSFYCPVKYHR 509
           S+SS A  N   P    P S KL   ++ LWK Q+   +R   L   + G+         
Sbjct: 3   SSSSTAATN---PFQGHPISEKLGKANHALWKVQVSAAVRGARLQGHLTGA--------- 50

Query: 510 KTSPAGQKIVTTDGFVDTDPDNEFVFNLMYNY*VNQDQAILSWLFIACVEETHSQVLDCT 689
              P  +  VT DG    +P      N  +      DQ +L +L  +   E   QV  C 
Sbjct: 51  TKRPPAEIAVTKDGATKKEP------NPAHEDWEATDQQVLGYLLSSLTREVLMQVATCD 104

Query: 690 YSHEIWIRLEHNYNATTKSRLMQLKTDLVHLNKSSESMLAYFDRARSISHKLVQI-DRSI 866
            + E+W  +E  Y+  T++R +  +  L +  K + S   YF + +S+  ++     R I
Sbjct: 105 TAAEVWSAIEQMYSTHTRARAINTRFALTNTKKGNMSTPEYFAKMKSLGDEMATAGGRPI 164

Query: 867 SDEDLVFHILQGL 905
            +E+L+ +I+ GL
Sbjct: 165 DEEELIQYIITGL 177


>emb|CAN64418.1| hypothetical protein VITISV_030041 [Vitis vinifera]
          Length = 1429

 Score =  143 bits (361), Expect = 3e-31
 Identities = 87/241 (36%), Positives = 130/241 (53%), Gaps = 5/241 (2%)
 Frame = +3

Query: 1461 YMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDASTSTSSG---WVPDSGATHHITSDLS 1631
            Y P+  Y   Q H   Y    CP+    +   + +T+TSS    W+ DS A+H+ITS +S
Sbjct: 149  YPPRCQYCDQQGHIAKY----CPKLXPSEATVNCTTTTSSPDKRWLIDSMASHNITSQVS 204

Query: 1632 NINLHSEYQGHDHVRVGNGSGLNITLIGSSLIN-ADCKFTLSNVLHVPSITRNIIFVHQF 1808
            N+  HSEY G D V +G+GSGL IT  GS  ++  + KF + + L VP+I +N+I VH +
Sbjct: 205  NLQFHSEYDGTDEVIIGDGSGLPITHSGSLTLSFPNRKFQVEDTLCVPTINKNLISVHHY 264

Query: 1809 TKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHMEFTASQLKHALXXXXXXXXLCH 1988
            TK+NN   EFH   F  KD  + ++LL GP  +G+Y +  + +    A           H
Sbjct: 265  TKQNNVILEFHPTYFLAKDWRTGEILLQGPCENGVYPLASSPAATPIAFVHERTSAXGWH 324

Query: 1989 NKLGQPSYKTLRHVLSSVNAVIDSHLS-ATVCSSCQLDKSHALPFPSSSTIVYGPLDLIH 2165
             +LG  S+K +  ++SS +    S LS +  C SC  +K+H LPF         P DL++
Sbjct: 325  XRLGHRSFKVVXRLISSFSLPTTSCLSGSNNCHSCSXNKAHQLPFHKHGLTSTTPFDLLY 384

Query: 2166 S 2168
            +
Sbjct: 385  T 385


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score =  141 bits (356), Expect = 1e-30
 Identities = 82/261 (31%), Positives = 125/261 (47%), Gaps = 2/261 (0%)
 Frame = +3

Query: 1392 CQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDASTS 1571
            CQ+C K GH   +C + Y   D+++P A   ++                       AS  
Sbjct: 276  CQLCSKVGHVVADCWHCY--DDSFVPDARVAAA-----------------------ASYG 310

Query: 1572 TSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINADCK-FT 1748
              S W  D+GAT HIT++L  +     Y G + +   +GSG++I  IG S I    +   
Sbjct: 311  VDSNWYVDTGATDHITNELEKLTTRDRYNGKEQIHTASGSGMDIKHIGQSTIRTPTRNLY 370

Query: 1749 LSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHMEF 1928
            L N+LHVP   +N+I  H+   +N+ F E H   F +KD  +   LL GP  +GLY +  
Sbjct: 371  LRNILHVPRTKKNLISAHRLAVDNHAFVEVHPRFFAIKDQITKNTLLRGPCCNGLYPLPA 430

Query: 1929 TASQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVN-AVIDSHLSATVCSSCQLDKS 2105
            + S  K  L        + H++LG PS++ ++ V+S  N   +       VC +CQ  KS
Sbjct: 431  STSSSKQVLGAIKPTVSIWHSRLGHPSWQIVQKVVSHNNLPCLGESKELGVCDACQKGKS 490

Query: 2106 HALPFPSSSTIVYGPLDLIHS 2168
            H LPF  S++    PL+L+ S
Sbjct: 491  HQLPFLKSTSASNFPLELVFS 511


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108708884|gb|ABF96679.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1437

 Score =  141 bits (355), Expect = 1e-30
 Identities = 81/265 (30%), Positives = 132/265 (49%), Gaps = 5/265 (1%)
 Frame = +3

Query: 1389 ECQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDAST 1568
            +CQ+C K GH+  +C Y Y   +N++P       +F G A                  S 
Sbjct: 278  KCQLCYKRGHTVCDCWYRY--DENFVPD-----ERFAGTA-----------------VSY 313

Query: 1569 STSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINADCK-F 1745
               + W  D+GAT H+T +L  + +  +Y G+D V   +G+G+ I+ IG+S++    +  
Sbjct: 314  GVDTNWYLDTGATDHVTGELDKLTVRDKYHGNDQVHTASGAGMEISHIGNSVVKTPSRNL 373

Query: 1746 TLSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHME 1925
             L +VL+VP   +N++  ++ T +N  F E +   F++KDL+  + LL G    GLY + 
Sbjct: 374  HLKDVLYVPKANKNLVSAYKLTSDNLAFIELYRKFFFIKDLAMRRTLLRGRCHKGLYALP 433

Query: 1926 FTAS---QLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVN-AVIDSHLSATVCSSCQ 2093
              +S   Q+K             H++LG PSY  +  V+ S N   +D     +VC +CQ
Sbjct: 434  SPSSHHHQVKQVYGVTKPSFERWHSRLGHPSYTVVEKVIKSQNLPCLDVSEQVSVCDACQ 493

Query: 2094 LDKSHALPFPSSSTIVYGPLDLIHS 2168
              KSH L FP S++    PL+L+ S
Sbjct: 494  KAKSHQLSFPKSTSESKYPLELVFS 518


>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1202

 Score =  138 bits (348), Expect = 9e-30
 Identities = 79/261 (30%), Positives = 125/261 (47%), Gaps = 2/261 (0%)
 Frame = +3

Query: 1392 CQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDASTS 1571
            CQ+C K GH  ++C + Y   D+Y+P      +  +    D                   
Sbjct: 281  CQVCHKRGHVASDCWHRY--DDSYVPDEKLGGAATYAYGID------------------- 319

Query: 1572 TSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINADCK-FT 1748
              + W  D+GAT HIT  L  +     Y+G D +   +G G++I  +G +++    +   
Sbjct: 320  --TNWYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGMSIKHVGHAIVPTPSRPLH 377

Query: 1749 LSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHMEF 1928
            L NVLHVP   +N++ VH+   +N  F E H   F +KD ++ + +L GP R GLY +  
Sbjct: 378  LKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPLP- 436

Query: 1929 TASQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVN-AVIDSHLSATVCSSCQLDKS 2105
              S L+ A           H +LG PS   +  +LS      + + ++ +VC +CQ  K 
Sbjct: 437  ARSSLRQAFVATPSFVR-WHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKC 495

Query: 2106 HALPFPSSSTIVYGPLDLIHS 2168
            H LPFP S+++   PL+LIHS
Sbjct: 496  HQLPFPRSTSVSNNPLELIHS 516



 Score = 65.5 bits (158), Expect = 1e-07
 Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 1/198 (0%)
 Frame = +3

Query: 333 SNSSMAEINKHIPLTVKPPSKLTTTSYPLWKSQIVPLLRSYNLFRFVDGSFYCPVKYHRK 512
           ++SSMA    +    ++   KLT  ++PLW +QI+  LR   L   +  +          
Sbjct: 2   ASSSMAAAIPNPLFGLQISEKLTKQNHPLWAAQILTTLRGAQLEEHIVST---------- 51

Query: 513 TSPAGQKIVTTDGFVDTDPDNEFVF-NLMYNY*VNQDQAILSWLFIACVEETHSQVLDCT 689
           T+    +I   DG  D D   + V  N  Y     QDQ +L ++F +   E   QV    
Sbjct: 52  TAAPAAEIEKEDG--DKDKKTKIVIPNPEYKTWFVQDQQVLGFIFSSLSREVLQQVAGAR 109

Query: 690 YSHEIWIRLEHNYNATTKSRLMQLKTDLVHLNKSSESMLAYFDRARSISHKLVQIDRSIS 869
            + + W  ++  ++  +K+  + +   L    K   S+  Y  + RS++ ++    + + 
Sbjct: 110 TAAQAWNMIDDMFSCKSKAGTINVLLALTTTQKGPMSISEYIAKMRSLADEMAAAGKPLD 169

Query: 870 DEDLVFHILQGLPTEFNA 923
           +E+LV +I+ GL +EF+A
Sbjct: 170 EEELVAYIINGLDSEFDA 187


>gb|EEC80484.1| hypothetical protein OsI_22718 [Oryza sativa Indica Group]
          Length = 506

 Score =  136 bits (343), Expect = 3e-29
 Identities = 78/261 (29%), Positives = 129/261 (49%), Gaps = 2/261 (0%)
 Frame = +3

Query: 1392 CQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDASTS 1571
            CQ+C+K GH   EC + Y   + Y+P     ++                       A+  
Sbjct: 270  CQVCLKRGHVAAECWHRY--DETYVPDERSAAAA----------------------AAYG 305

Query: 1572 TSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINADCK-FT 1748
              + W  D+GAT HIT++L  +++  +Y+G D +   +G+G+ I  IG S+I+   +   
Sbjct: 306  IDTNWYLDTGATDHITNELDKLDVWEKYKGGDKIHTASGAGMEIKHIGDSVIHTPTRELH 365

Query: 1749 LSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHMEF 1928
            L N+LHVP   +N+I  H+   +N  F E H + F +KD ++   +L G  R  LY +  
Sbjct: 366  LKNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRATRNTILKGRCRRRLYSLPT 425

Query: 1929 TASQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVNAVIDSHLSA-TVCSSCQLDKS 2105
            + ++  HA           H++LG P+   +  VLS  N    +  +  ++C +CQ  KS
Sbjct: 426  SPAKQVHAATTPSFSRW--HSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKS 483

Query: 2106 HALPFPSSSTIVYGPLDLIHS 2168
            H LP+P SS++   PL+LI S
Sbjct: 484  HQLPYPKSSSVSSQPLELIFS 504



 Score = 67.8 bits (164), Expect = 2e-08
 Identities = 47/205 (22%), Positives = 92/205 (44%)
 Frame = +3

Query: 333 SNSSMAEINKHIPLTVKPPSKLTTTSYPLWKSQIVPLLRSYNLFRFVDGSFYCPVKYHRK 512
           S+SS A  N    + V    KLT  +Y LW +Q++  +R   L   + G+   P     K
Sbjct: 4   SSSSTASTNPLFGVQVS--EKLTKGNYALWSAQVLAAIRGARLDGHITGATAAPSMEIEK 61

Query: 513 TSPAGQKIVTTDGFVDTDPDNEFVFNLMYNY*VNQDQAILSWLFIACVEETHSQVLDCTY 692
           T+              +D   E + N  Y      DQ +L +L      +  +QV   + 
Sbjct: 62  TA--------------SDKTMEKIVNPAYQEWFASDQQVLGFLLSTLSRDILTQVATAST 107

Query: 693 SHEIWIRLEHNYNATTKSRLMQLKTDLVHLNKSSESMLAYFDRARSISHKLVQIDRSISD 872
           + + W ++   + A TK+R + ++  L +  K + S+  Y  + ++++ ++    + + +
Sbjct: 108 AAQAWQQVCAMFTAQTKARSLNVRLTLTNTQKGNMSISEYCGKMKALADEIASSGKPLDE 167

Query: 873 EDLVFHILQGLPTEFNAFKTSITTQ 947
           EDLV ++L GL  +F    ++I  +
Sbjct: 168 EDLVAYVLNGLDDDFEPVVSAIVAR 192


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  136 bits (343), Expect = 3e-29
 Identities = 89/275 (32%), Positives = 131/275 (47%), Gaps = 15/275 (5%)
 Frame = +3

Query: 1389 ECQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFD----VYN 1556
            +CQ+C K GH+   C + +             + Q +    D     +P A +    +  
Sbjct: 320  QCQLCGKFGHTVVRCYHRFD-----------INFQGYNPNMDTVQTNKPNAKNQVQAMMA 368

Query: 1557 DASTSTSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINAD 1736
              ST +   W  D+GATHH++  +  ++    Y G+D V VGNG  L I   G++   + 
Sbjct: 369  SPSTISDEAWFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGNGKHLRILHTGTTFFPSS 428

Query: 1737 CK-FTLSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGL 1913
             K F L  VLHVP I  N+I V QF  +NN FFEFH   F+VKD  + K+LL G +  GL
Sbjct: 429  SKTFQLRQVLHVPDIATNLISVSQFCADNNTFFEFHPRFFFVKDQVTKKILLQGSLEHGL 488

Query: 1914 YHME----------FTASQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVNAVIDSH 2063
            Y              ++S  + +         L H++LG P+   L+H+L+S N     H
Sbjct: 489  YRFPARFVPSPAAFVSSSYDRSSNLSLTTTTTLWHSRLGHPADNILKHILTSCNISHQCH 548

Query: 2064 LSATVCSSCQLDKSHALPFPSSSTIVYGPLDLIHS 2168
             +  VC +CQ  KSH LPF    +    PL L+H+
Sbjct: 549  KN-NVCCACQFAKSHKLPFNVXVSRASHPLALLHA 582



 Score = 81.6 bits (200), Expect = 1e-12
 Identities = 53/201 (26%), Positives = 99/201 (49%), Gaps = 5/201 (2%)
 Frame = +3

Query: 387 PSKLTTTSYPLWKSQIVPLLRSYNLFRFVDGSFYCPVKYHRKTSPAGQKIVTTDGFVDTD 566
           P KL   +Y LW++Q+  ++ +      ++G   CP +   KTS             +T+
Sbjct: 98  PIKLDRNNYILWRTQMENVVFANGFEDHIEGLKICPPQ---KTSSG-----------ETN 143

Query: 567 PDNEFVFNLMYNY*VNQDQAILSWLFIACVEETHSQVLDCTYSHEIWIRLEHNYNATTKS 746
           PD  FV    +      D+ ILSW++ +   E   Q++    SH  W  LE  + A++++
Sbjct: 144 PD--FVMWRRF------DRMILSWIYSSLTPEIMGQIVGYQSSHAXWFALEXXFXASSRA 195

Query: 747 RLMQLKTDLVHLNKSSESMLAYFDRARSISHKLVQIDRSISDEDLVFHILQGLPTEFNAF 926
           R+MQL+ +     K S +M+ Y  + +S++  L  I   ++D D +  +L GL  ++N+ 
Sbjct: 196 RVMQLRLEFQTTRKGSLTMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADYNSI 255

Query: 927 KTSITTQQ-----LKNDNLIT 974
             S+T ++     +  DN+I+
Sbjct: 256 VASLTAREDEDNSVAEDNVIS 276


>emb|CAN69706.1| hypothetical protein VITISV_037595 [Vitis vinifera]
          Length = 431

 Score =  136 bits (342), Expect = 4e-29
 Identities = 82/250 (32%), Positives = 136/250 (54%), Gaps = 10/250 (4%)
 Frame = +3

Query: 1449 PSDN---YMPQAHYTSSQFHGDAYDDFWCPEPEAFDVY-NDASTST--SSGWVPDSGATH 1610
            PS+N   Y P+  +     H        CP+ +  ++  N A+TST     W+ DS A+H
Sbjct: 128  PSNNQRPYRPKCQFCDELGHTTKN----CPQLKPSEITANSATTSTMKEQKWLLDSAASH 183

Query: 1611 HITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINADCK-FTLSNVLHVPSITRN 1787
            +I  DL N+++HSEY G D V +G+GSGL ++ +GS  I++  + F L + L VP++ +N
Sbjct: 184  NIIGDLQNLSIHSEYDGTDEVVLGDGSGLAVSHVGSLAIHSPNRTFILRDTLCVPNLKKN 243

Query: 1788 IIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLY-HMEFTASQLKHALXXX 1964
            +I VH FT +NN + EFH   F VK+  +  +LL G   + +Y   E         +   
Sbjct: 244  MISVHHFTSQNNVYVEFHPSYFLVKEPITGAILLRGSCENDIYIFPESLVGNFSQKVANV 303

Query: 1965 XXXXXL--CHNKLGQPSYKTLRHVLSSVNAVIDSHLSATVCSSCQLDKSHALPFPSSSTI 2138
                 L   H +LG PSY  +++++S+ +    ++    +C SC ++KSH  PF ++S  
Sbjct: 304  HERTSLDGWHKRLGHPSYPIVKNLVSTFSLPTTTNKMTMLCRSCSINKSHQQPFHTTSLS 363

Query: 2139 VYGPLDLIHS 2168
              GPL++I++
Sbjct: 364  SXGPLEIIYT 373


>gb|ABF95616.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1241

 Score =  136 bits (342), Expect = 4e-29
 Identities = 78/261 (29%), Positives = 128/261 (49%), Gaps = 2/261 (0%)
 Frame = +3

Query: 1392 CQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDASTS 1571
            CQ+C+K GH   EC + Y   + Y+P     ++                       A+  
Sbjct: 270  CQVCLKRGHVAAECWHRY--DETYVPDERSAAAA----------------------AAYG 305

Query: 1572 TSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINADCK-FT 1748
              + W  D+GAT HIT++L  +++  +Y+G D +   +G+G+ I  IG S+I+   +   
Sbjct: 306  IDTNWYLDTGATDHITNELDKLDVREKYKGGDKIHTASGAGMEIKHIGDSVIHTPTRELH 365

Query: 1749 LSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHMEF 1928
            L N+LHVP   +N+I  H+   +N  F E H + F +KD  +   +L G  R  LY +  
Sbjct: 366  LKNILHVPQAKKNLISAHRLAMDNFAFLEVHSNYFLIKDRVTRNTILKGRCRRRLYSLPT 425

Query: 1929 TASQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVNAVIDSHLSA-TVCSSCQLDKS 2105
            + ++  HA           H++LG P+   +  VLS  N    +  +  ++C +CQ  KS
Sbjct: 426  SPAKQVHAATTPSFSRW--HSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKS 483

Query: 2106 HALPFPSSSTIVYGPLDLIHS 2168
            H LP+P SS++   PL+LI S
Sbjct: 484  HQLPYPKSSSVSSQPLELIFS 504



 Score = 69.3 bits (168), Expect = 7e-09
 Identities = 47/205 (22%), Positives = 93/205 (45%)
 Frame = +3

Query: 333 SNSSMAEINKHIPLTVKPPSKLTTTSYPLWKSQIVPLLRSYNLFRFVDGSFYCPVKYHRK 512
           S+SS A  N    + V    KLT  +Y LW +Q++  +R   L   + G+   P     K
Sbjct: 4   SSSSTASTNPLFGVQVS--KKLTKGNYALWSAQVLAAIRGARLDGHITGATAAPSMEIEK 61

Query: 513 TSPAGQKIVTTDGFVDTDPDNEFVFNLMYNY*VNQDQAILSWLFIACVEETHSQVLDCTY 692
           T+              +D   E + N  Y      DQ +L +L      +  +QV   + 
Sbjct: 62  TA--------------SDKTTEKIVNPAYQEWFASDQQVLGFLLSTLSRDILTQVATAST 107

Query: 693 SHEIWIRLEHNYNATTKSRLMQLKTDLVHLNKSSESMLAYFDRARSISHKLVQIDRSISD 872
           + + W ++   + A TK+R + ++  L +  K + S+  Y  + +++++++    + + +
Sbjct: 108 AAQAWQQVCAMFTAQTKARSLNVRLTLTNTQKGNMSISEYCGKMKALANEIASSGKPLDE 167

Query: 873 EDLVFHILQGLPTEFNAFKTSITTQ 947
           EDLV ++L GL  +F    ++I  +
Sbjct: 168 EDLVAYVLNGLDDDFEPVVSAIVAR 192


>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1431

 Score =  136 bits (342), Expect = 4e-29
 Identities = 79/261 (30%), Positives = 123/261 (47%), Gaps = 2/261 (0%)
 Frame = +3

Query: 1392 CQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYNDASTS 1571
            CQ+C K GH  ++C + Y   D+Y+P      +  +    D                   
Sbjct: 272  CQVCHKRGHVASDCWHRY--DDSYVPDEKLGGAATYAYGVD------------------- 310

Query: 1572 TSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLI-NADCKFT 1748
              + W  D+GAT HIT  L  +     Y+G D +   +G G +I  +G +++        
Sbjct: 311  --TNWYVDTGATDHITGQLDKLTTKERYKGTDQIHTASGEGTSIKHVGHAIVPTPSHPLH 368

Query: 1749 LSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLYHMEF 1928
            L NVLHVP   +N++ VH+   +N  F E H   F +KD ++ + +L GP R GLY +  
Sbjct: 369  LKNVLHVPEAAKNLVSVHKLVADNYAFLEIHGKYFLIKDKATRRTILEGPCRRGLYPLP- 427

Query: 1929 TASQLKHALXXXXXXXXLCHNKLGQPSYKTLRHVLSSVN-AVIDSHLSATVCSSCQLDKS 2105
              S L+ A           H +LG PS   +  +LS      + + ++ +VC +CQ  K 
Sbjct: 428  ARSSLRQAFVATPSFVR-WHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKC 486

Query: 2106 HALPFPSSSTIVYGPLDLIHS 2168
            H LPFP S+++   PL+LIHS
Sbjct: 487  HQLPFPRSTSVSNNPLELIHS 507



 Score = 65.1 bits (157), Expect = 1e-07
 Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
 Frame = +3

Query: 333 SNSSMAEINKHIPLTVKPPSKLTTTSYPLWKSQIVPLLRSYNLFRFVDGSFYCPVKYHRK 512
           ++SSMA    +    ++   KLT  ++PLW +QI+  LR   L   +  +          
Sbjct: 2   ASSSMAAAISNPLFGLQISDKLTKQNHPLWAAQILTTLRGAQLEEHIVST---------- 51

Query: 513 TSPAGQKIVTTDGFVDTDPDNEFVF-NLMYNY*VNQDQAILSWLFIACVEETHSQVLDCT 689
           T+    +I   DG  D D   + V  N  Y     QDQ +L ++F +   E   QV    
Sbjct: 52  TAAPAAEIEKEDG--DKDKKTKIVIPNPEYKTWFVQDQQVLGFIFSSLSREVLQQVAGAR 109

Query: 690 YSHEIWIRLEHNYNATTKSRLMQLKTDLVHLNKSSESMLAYFDRARSISHKLVQIDRSIS 869
            + + W  ++  ++  +K+           +NK   SM  Y  + RS++ K+    + + 
Sbjct: 110 TAAQAWNMIDDMFSCKSKAGT---------INKGPMSMSEYIAKMRSLADKMAATGKPLD 160

Query: 870 DEDLVFHILQGLPTEFNA 923
           +E+LV +I+ GL +EF+A
Sbjct: 161 EEELVAYIINGLDSEFDA 178


>gb|AAC02666.1| polyprotein [Arabidopsis thaliana]
          Length = 1451

 Score =  136 bits (342), Expect = 4e-29
 Identities = 90/267 (33%), Positives = 135/267 (50%), Gaps = 4/267 (1%)
 Frame = +3

Query: 1380 YYIECQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYND 1559
            Y  +CQIC   GHS   C  +   + +Y       S+Q    +Y  +   +P A  V   
Sbjct: 276  YQGKCQICSVHGHSARRCPQLQQHAGSY------ASNQSSSASYAPW---QPRANMV--S 324

Query: 1560 ASTSTSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINADC 1739
            A+   S  W+ DSGATHH+TSDL+N+ LH  Y G + V + +GSGL I+  GS+L+    
Sbjct: 325  ATPYNSGNWLLDSGATHHLTSDLNNLALHQPYNGDEEVTIADGSGLPISHSGSALLPTPT 384

Query: 1740 K-FTLSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLY 1916
            +   L +VL+VP I +N+I V++    N    EF    F VKDLS+   LL G  ++ LY
Sbjct: 385  RSLALKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPAHFQVKDLSTGARLLQGKTKNELY 444

Query: 1917 HMEFTASQLKHALXXXXXXXXL--CHNKLGQPSYKTLRHVLSSVNAVIDSHL-SATVCSS 2087
                 +S              L   H +LG PS   L+ ++S  +  I   L +  +CS 
Sbjct: 445  EWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKALISKFSLPISHSLQNQLLCSD 504

Query: 2088 CQLDKSHALPFPSSSTIVYGPLDLIHS 2168
            C ++KSH LPF S++     PL+ +++
Sbjct: 505  CSINKSHKLPFYSNTIASSHPLEYLYT 531


>gb|AAC02672.1| polyprotein [Arabidopsis arenosa]
          Length = 1390

 Score =  136 bits (342), Expect = 4e-29
 Identities = 90/267 (33%), Positives = 135/267 (50%), Gaps = 4/267 (1%)
 Frame = +3

Query: 1380 YYIECQICIKPGHSTTECRYIYAPSDNYMPQAHYTSSQFHGDAYDDFWCPEPEAFDVYND 1559
            Y  +CQIC   GHS   C  +   + +Y       S+Q    +Y  +   +P A  V   
Sbjct: 276  YQGKCQICSVHGHSARRCPQLQQHAGSY------ASNQSSSSSYAPW---QPRANMV--S 324

Query: 1560 ASTSTSSGWVPDSGATHHITSDLSNINLHSEYQGHDHVRVGNGSGLNITLIGSSLINADC 1739
            A+   S  W+ DSGATHH+TSDL+N+ LH  Y G + V + +GSGL I+  GS+L+    
Sbjct: 325  ATPYNSGNWLLDSGATHHLTSDLNNLALHQPYNGGEEVTIADGSGLPISHSGSALLPTPT 384

Query: 1740 K-FTLSNVLHVPSITRNIIFVHQFTKENNCFFEFHHDKFYVKDLSSHKVLLTGPVRDGLY 1916
            +   L +VL+VP I +N+I V++    N    EF    F VKDLS+   LL G  ++ LY
Sbjct: 385  RSLDLKDVLYVPDIQKNLISVYRMCNTNGVSVEFFPAHFQVKDLSTGARLLQGKTKNELY 444

Query: 1917 HMEFTASQLKHALXXXXXXXXL--CHNKLGQPSYKTLRHVLSSVNAVIDSHL-SATVCSS 2087
                 +S              L   H +LG PS   L+ ++S  +  I   L +  +CS 
Sbjct: 445  EWPVNSSIATSMFASPTPKTDLPSWHARLGHPSLPILKTLISKFSLPISHSLQNQLLCSD 504

Query: 2088 CQLDKSHALPFPSSSTIVYGPLDLIHS 2168
            C ++KSH LPF S++     PL+ +++
Sbjct: 505  CSINKSHKLPFYSNTIASSHPLEYLYT 531