BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00011370
         (1528 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron sp...   411   e-112
ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citr...   378   e-102
ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prun...   378   e-102
ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron sp...   375   e-101
gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitat...   370   e-100
ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron sp...   352   3e-94
ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron sp...   340   1e-90
ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron sp...   340   1e-90
ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron sp...   340   1e-90
ref|XP_007033221.1| maize chloroplast splicing factor CRS1, puta...   339   2e-90
ref|XP_007033220.1| maize chloroplast splicing factor CRS1, puta...   339   2e-90
ref|XP_007033219.1| maize chloroplast splicing factor CRS1, puta...   339   2e-90
ref|XP_007033218.1| maize chloroplast splicing factor CRS1, puta...   339   2e-90
ref|XP_007033217.1| maize chloroplast splicing factor CRS1, puta...   339   2e-90
ref|XP_007139175.1| hypothetical protein PHAVU_008G007700g [Phas...   327   9e-87
ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron sp...   327   1e-86
ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron sp...   312   3e-82
ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   306   2e-80
ref|XP_004973284.1| PREDICTED: chloroplastic group IIA intron sp...   295   5e-77
ref|XP_004973285.1| PREDICTED: chloroplastic group IIA intron sp...   293   1e-76

>ref|XP_002280704.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1184

 Score =  411 bits (1057), Expect = e-112
 Identities = 231/422 (54%), Positives = 290/422 (68%), Gaps = 14/422 (3%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNN----RDDWSLTDKIKGGRGKQAMRKIV 1057
            KMPTAPWMK P+L+  +EVL++S+ R  K   +    + D SLT+K+ GGRG +AM+KI+
Sbjct: 74   KMPTAPWMKGPLLLQPNEVLDLSKARPKKVAGSAGAEKPDRSLTEKVSGGRGAKAMKKIM 133

Query: 1056 DSITKLDDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDLRMNPRMPWVVTQKVVFRRT 877
             SI KL +         Q+  E ++F V +         + R+  +MPW+ T+KVVFRRT
Sbjct: 134  QSIVKLQET--HTSDETQENTEEFEFGVSLEGIGGDE--NSRIGGKMPWLKTEKVVFRRT 189

Query: 876  KKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELAMVK 697
            KKE+VVTAA            + +A K++KWVKV KAGVTE+V+D+I+++WK  ELAMVK
Sbjct: 190  KKEKVVTAAELTLDPMLLERLRGEAVKMRKWVKVKKAGVTESVVDQIHMVWKSDELAMVK 249

Query: 696  FDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSNGSLKLN--LVPASDK 523
            FD+PLCR MDRAREI+E+KT GLV+W+KKDT VVYRG  + S S    K+   LV  +D 
Sbjct: 250  FDMPLCRNMDRAREILEIKTRGLVIWSKKDTLVVYRGSNYQSTSKHFQKMRPGLVAGADA 309

Query: 522  ISLSKAVVLNEDVSAGSLTNRAVQ-DENITGKSL-----EESTHFAG--MEEFFCHQLVQ 367
             S SK   LN+      LT   ++  E+ TG+ +     EE +   G  MEE    Q V 
Sbjct: 310  -SNSK---LNQSNFEDDLTISEIKFHESTTGEKMGRKDGEEDSSPTGIFMEEMVDSQPVN 365

Query: 366  GTLYEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADD 187
            G+LYEREADRLLDGLGPRF+DWW PKPLPVDADLLPEV+PGF  PFRL PP  R +L DD
Sbjct: 366  GSLYEREADRLLDGLGPRFIDWWRPKPLPVDADLLPEVLPGFRPPFRLSPPQTRSKLTDD 425

Query: 186  ELTYLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWE 7
            ELTYLRKLA ALPTHF LGRN KL GLAAAI+KLWEK+ +VKIA+K G+PNT NEQMA E
Sbjct: 426  ELTYLRKLAYALPTHFVLGRNRKLQGLAAAILKLWEKSLIVKIAIKWGIPNTKNEQMANE 485

Query: 6    IK 1
            +K
Sbjct: 486  LK 487


>ref|XP_006430740.1| hypothetical protein CICLE_v10013368mg [Citrus clementina]
            gi|557532797|gb|ESR43980.1| hypothetical protein
            CICLE_v10013368mg [Citrus clementina]
          Length = 770

 Score =  378 bits (970), Expect = e-102
 Identities = 217/415 (52%), Positives = 274/415 (66%), Gaps = 7/415 (1%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNRDDWSLTDKIKGGRGKQAMRKIVDSIT 1045
            KMPTAPWM+ PI++  DE++  S+ +  K+F   D   LT K  G RGKQAM+KI+++I 
Sbjct: 60   KMPTAPWMRSPIVLQPDEIIKPSKPKTKKSFKKTDK-GLTAKESGVRGKQAMKKIIENIE 118

Query: 1044 KLDDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDLR--MNPRMPWVVTQKVVFRRTKK 871
            KL    +   +  +K+ E ++F            EDLR     ++PW+  ++ VFRR KK
Sbjct: 119  KLQK-DQILDETQKKDMEKFEFR-GCFEENGSDEEDLRGGFGGKVPWLREERFVFRRMKK 176

Query: 870  ERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELAMVKFD 691
            ER+VT A            K +A K++KWVKV KAGVTE+V+ EI + W+R ELAMVKFD
Sbjct: 177  ERMVTKAETMLDGELIERLKDEARKMRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFD 236

Query: 690  IPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSNGSLKLNLVPASDK---I 520
            +PLCR MDRAREI+ELKTGGLV+WTKKD HVVYRG      S  S+K+    A D+   +
Sbjct: 237  VPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRG----DGSKSSVKMCPRSADDQEAPL 292

Query: 519  SLSKAVVLNEDVSAGSL-TNRAVQDENITGKSLEESTHFAGMEEFFCHQL-VQGTLYERE 346
            S S  + L + V+   + +N A  D+N + K  EE++    +  F    L +  +LYERE
Sbjct: 293  SKSTHLHLEKKVNVSWIKSNTATLDQNRSLKDGEENSLPTSI--FMDKNLRIDKSLYERE 350

Query: 345  ADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADDELTYLRK 166
             DRLLDGLGPRFVDWW  KPLPVD DLLPEV+PGF  PFRL PP  R +L DDELTYLRK
Sbjct: 351  GDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDARSKLTDDELTYLRK 410

Query: 165  LARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            LA  LPTHF LGRN  L GLA AI+KLWEK+ V KIAVK G+PNT+NEQMA E+K
Sbjct: 411  LAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKIAVKWGIPNTDNEQMANELK 465


>ref|XP_007217313.1| hypothetical protein PRUPE_ppa016241mg [Prunus persica]
            gi|462413463|gb|EMJ18512.1| hypothetical protein
            PRUPE_ppa016241mg [Prunus persica]
          Length = 809

 Score =  378 bits (970), Expect = e-102
 Identities = 226/523 (43%), Positives = 292/523 (55%), Gaps = 48/523 (9%)
 Frame = -2

Query: 1425 MSITIFFSPSS----------HHSNTLHFFYNADSF--------KTLPSKPFDFTSKPLL 1300
            M  T+F +P S           HSN     YN  S            P+ P    S   L
Sbjct: 1    MPATLFLTPLSTLPNITHHLPSHSNPPFHSYNPISSALNSKPPQNPKPTNPIPSKSPNSL 60

Query: 1299 RVSRSQNEIQSQNXXXXXXXXXPCTKMPTAPWMKEPILIPSDEVLNISRIRKLKNFNN-- 1126
             +S +     S+           C K PTAPWMK P+L+   EV++ S+ R  K  NN  
Sbjct: 61   SLSSTTTTPNSKAPSEPNSSTDACIKAPTAPWMKGPLLLQPHEVIDFSKPRNKKTHNNAK 120

Query: 1125 --RDDWSLTDKIKGGRGKQAMRKIVDSITKLD------------------DLTEKRGQ-- 1012
              + D  L  K+ G RG +A+++IV SI +L                   D  E  GQ  
Sbjct: 121  AEKPDTVLAGKLVGIRGDKAIKQIVQSIERLGPNQKTDETQKGFGEFRIWDSLEGLGQNE 180

Query: 1011 -LPQKEAEGYDFSVPIXXXXXXXXEDLRMNPRMPWVVTQKVVFRRTKKERVVTAAXXXXX 835
               +   +  +F +           D R   +MPW   +++VF+R KK+RV +AA     
Sbjct: 181  KWDETHKDFVEFGIGGCLEGLGKAADSRFGGKMPWERDERIVFQRIKKKRVASAAELSLE 240

Query: 834  XXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELAMVKFDIPLCRYMDRARE 655
                   + +A K++KWVKV KAGVT+A++D+I  IWK  ELAMVKFD+PLCR M RA+E
Sbjct: 241  KELLERLRAEAAKMRKWVKVKKAGVTQAIVDDIKFIWKTNELAMVKFDVPLCRNMHRAQE 300

Query: 654  IIELKTGGLVVWTKKDTHVVYRGLLHGSPSNGSLKLNLVPASDKISLSKAVV---LNEDV 484
            I+E KTGG+VVW KKDT V+YRG  + S S    K+    A  + +LS   +   L E+ 
Sbjct: 301  IVETKTGGMVVWGKKDTLVIYRGCNYQSSSKFFPKMRPCSADRQETLSSDHMQPDLEENS 360

Query: 483  SAGSLTNRAVQDENITGKSLEESTHFAG--MEEFFCHQLVQGTLYEREADRLLDGLGPRF 310
            S    +  +  DE ++ K  EE    +G   E     Q    +LYE+EADRLLDGLGPRF
Sbjct: 361  SYQYKSFESPVDEKMSRKDAEEDCIQSGTFQETSMSCQPTSRSLYEKEADRLLDGLGPRF 420

Query: 309  VDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADDELTYLRKLARALPTHFALG 130
            +DWW  KPLPVDADLLPEV+PGF  P R CPPH R +L DDELT+LRK AR+LPTHF LG
Sbjct: 421  IDWWMHKPLPVDADLLPEVVPGFKAPIRRCPPHTRSKLTDDELTFLRKFARSLPTHFVLG 480

Query: 129  RNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            RN KL GLAAAI+KLWEK+ + KIAVK GVPNTNNEQMA+E++
Sbjct: 481  RNRKLQGLAAAILKLWEKSLIAKIAVKFGVPNTNNEQMAYELR 523


>ref|XP_006482225.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857343|ref|XP_006482226.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 771

 Score =  375 bits (962), Expect = e-101
 Identities = 216/415 (52%), Positives = 271/415 (65%), Gaps = 7/415 (1%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNRDDWSLTDKIKGGRGKQAMRKIVDSIT 1045
            KMPTAPWM+ PI++  DE++  S+ +  K+F   D   LT K  G RGKQAM+KI+++I 
Sbjct: 54   KMPTAPWMRSPIVLQPDEIIKPSKPKTKKSFKKTDK-GLTAKESGVRGKQAMKKIIENIE 112

Query: 1044 KLDDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDLR--MNPRMPWVVTQKVVFRRTKK 871
            KL    +   +  +K  E ++F            EDLR     ++PW+   + VFRR KK
Sbjct: 113  KLQK-DQILDETQKKVMEKFEFK-GCFEENVSHEEDLRGGFGGKVPWLREDRFVFRRMKK 170

Query: 870  ERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELAMVKFD 691
            ER+VT A            K +A K++KWVKV KAGVTE+V+ EI + W+R ELAMVKFD
Sbjct: 171  ERMVTKAETMLDGELLERLKDEARKMRKWVKVKKAGVTESVVFEIRLAWRRNELAMVKFD 230

Query: 690  IPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSNGSLKLNLVPASDK---I 520
            +PLCR MDRAREI+ELKTGGLV+WTKKD HVVYRG      S  S+K+    A D+   +
Sbjct: 231  VPLCRNMDRAREILELKTGGLVIWTKKDAHVVYRG----DSSKSSVKMCPRSADDQEAPL 286

Query: 519  SLSKAVVLNEDVSAGSL-TNRAVQDENITGKSLEESTHFAGMEEFFCHQL-VQGTLYERE 346
            S S  + L + V+   + +N A  D+N + K  EE++    +  F    L +  +LYERE
Sbjct: 287  SKSTHLHLEKKVNVSWIKSNTATLDQNRSLKDGEENSLPTSI--FMDKNLRIDKSLYERE 344

Query: 345  ADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADDELTYLRK 166
             DRLLDGLGPRFVDWW  KPLPVD DLLPEV+PGF  PFRL PP  R +L DDELTYLRK
Sbjct: 345  GDRLLDGLGPRFVDWWMWKPLPVDGDLLPEVVPGFKPPFRLSPPDARSKLTDDELTYLRK 404

Query: 165  LARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            LA  LPTHF LGRN  L GLA AI+KLWEK+ V KI VK G+PNT+NEQMA E+K
Sbjct: 405  LAHPLPTHFVLGRNRGLQGLATAILKLWEKSLVAKITVKWGIPNTDNEQMANELK 459


>gb|EXC20503.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 828

 Score =  370 bits (950), Expect = e-100
 Identities = 217/488 (44%), Positives = 282/488 (57%), Gaps = 13/488 (2%)
 Frame = -2

Query: 1425 MSITIFFSPSSHHSNTLHFFYNADSFKTLPSKPFDFTSKPLLRVSRSQNEIQSQNXXXXX 1246
            M  T+F SPS+   NT H   N   FK  PS  +   S  L     + +   S       
Sbjct: 1    MLATLFLSPSTF-PNTHHLSSN---FKR-PSDSYILISSSLNPKPTNYHHHASTKENPDS 55

Query: 1245 XXXXPCTKMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNRDDWS----LTDKIKGGRGK 1078
                   KMPT PWMK P+++   EV ++S+      F+NR        LTDK+ G RGK
Sbjct: 56   KPPLEPIKMPTPPWMKGPLVLQPHEVTDLSKPENDNKFSNRKAEKSVNGLTDKLVGRRGK 115

Query: 1077 QAMRKIVDSITKLDDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDLRMNPRMPWVVTQ 898
              ++KI   I +L   ++   +  QK+  G +    I        E      RMPW   +
Sbjct: 116  NVIKKIARRIEELGRKSKVDSEETQKDFVGKN---GIGDCLEGLGESRSGGERMPWEKDE 172

Query: 897  KVVFRRTKKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKR 718
              VFRR KKE++V++A            + +A K++KWVKV KAGVT+ V++++  +WK 
Sbjct: 173  GFVFRRMKKEKIVSSAELRLERELLERLRSEARKMRKWVKVKKAGVTKEVVEDVKFVWKS 232

Query: 717  GELAMVKFDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSN-------G 559
             ELAMVKFD+PLCR MDRA+EI+E+KTGGLVVW +KD  V+YRG  +   S        G
Sbjct: 233  NELAMVKFDVPLCRNMDRAQEILEMKTGGLVVWRRKDAQVIYRGCNYQPTSKTFPRTYAG 292

Query: 558  SLKLNLVPASDKISLS--KAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAGMEEFF 385
                   P S+ + L   K   ++E  S  +   R +  +N  G+++  +        F 
Sbjct: 293  FSGHQETPFSNLVQLDSRKGNSVSEVKSYENTIERKISKKNTEGETIPTAIILKNDANF- 351

Query: 384  CHQLVQGTLYEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVR 205
                   +LY READRLLDGLGPRF+DWW  KPLPVDADLLPEV+PGF  PFR CPPH R
Sbjct: 352  ---QPSSSLYVREADRLLDGLGPRFIDWWMNKPLPVDADLLPEVVPGFRPPFRRCPPHTR 408

Query: 204  LQLADDELTYLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNN 25
             +L D+ELTYLRKLA +LPTHF LGRN KL GLAAAI+KLWEK H+ KIAVK+GVPNTNN
Sbjct: 409  SKLTDEELTYLRKLAHSLPTHFVLGRNRKLQGLAAAILKLWEKCHIAKIAVKLGVPNTNN 468

Query: 24   EQMAWEIK 1
            EQMA+E+K
Sbjct: 469  EQMAYELK 476


>ref|XP_006357840.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 802

 Score =  352 bits (902), Expect = 3e-94
 Identities = 214/527 (40%), Positives = 294/527 (55%), Gaps = 52/527 (9%)
 Frame = -2

Query: 1425 MSITIFFSPSS-----HHSN------TLHFFYNADSFKTLPSKPFDFTSKPLLRVSRSQN 1279
            MS  +  +P+S     HHSN      TL F  + +S  T  S  ++  + P+    +   
Sbjct: 1    MSAPLVLAPNSNTLCYHHSNSFINQKTLLFSKSFNSKFTSFSSQYNDNNNPIKNEEQYNL 60

Query: 1278 EIQSQNXXXXXXXXXPCTKMPTAPWMKEPILIPSDEVLNISRIRKLKNFN-----NRDDW 1114
            E ++Q+            K PTAPWM+ P+L+  ++ L++S+ RK K+ N     N +D 
Sbjct: 61   EFENQDYGSSSSGI----KGPTAPWMRGPLLLEPNQFLDLSKSRKKKDANFAKTQNPND- 115

Query: 1113 SLTDKIKGGRGKQAMRKIVDSITKLDDLTEKRGQLPQKEA-------------------- 994
            +L+ K+ GGRGK+AM+ I   I KL +     G   + +A                    
Sbjct: 116  ALSGKVSGGRGKKAMKMIYQGIDKLQETQIGEGTQVETDAKVEFQFPPGSLSEWGDVSYE 175

Query: 993  ----------------EGYDFSVPIXXXXXXXXEDLRMNPRMPWVVTQKVVFRRTKKERV 862
                            EG +F V             ++  +MPW    ++V+RR KKE+V
Sbjct: 176  IEEKNPYGEEDNVESLEGVEFGV--LSREGEGRGSRKIGVKMPWESEVRIVYRRMKKEKV 233

Query: 861  VTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELAMVKFDIPL 682
            V  A            + +A +I+KWVKV KAGVT  V+D+I+ IWK  ELAM+KFD+PL
Sbjct: 234  VMTAESNLDAMLLERLRGEAARIQKWVKVKKAGVTRTVVDQIHFIWKNNELAMLKFDLPL 293

Query: 681  CRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSNGSLKLNLVPASDKISLSKAV 502
            CR MDRAREI+E+KTGG VVW K++  VVYRG  + +     L+ + + +    S ++ +
Sbjct: 294  CRNMDRAREIVEMKTGGFVVWMKQNALVVYRGCSY-TLQQKELQHDFLCSHQNSSFTENI 352

Query: 501  VLNEDVSAGSLTNRAVQDENITGKSLEESTHFAGMEEFFCHQLVQGTLYEREADRLLDGL 322
                  S  + +  +  +    G S E+S     M E         +LY REA+RLLD L
Sbjct: 353  KQTSIFSPLNSSGSSEDEMISVGNSEEDSL---AMNE---------SLYVREANRLLDDL 400

Query: 321  GPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADDELTYLRKLARALPTH 142
            GPR+VDWWWPKPLPV+ADLLPEV+PGF  PFRLCPP  R +L DDELT LRKLAR+LPTH
Sbjct: 401  GPRYVDWWWPKPLPVNADLLPEVVPGFKPPFRLCPPRSRSKLTDDELTQLRKLARSLPTH 460

Query: 141  FALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            F LGRN KL GLAAA++KLWEK H+ KIA+K G+PNT+NE MA E+K
Sbjct: 461  FVLGRNRKLQGLAAAVVKLWEKCHIAKIALKWGIPNTSNELMANELK 507


>ref|XP_006603058.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Glycine max]
          Length = 744

 Score =  340 bits (871), Expect = 1e-90
 Identities = 197/419 (47%), Positives = 259/419 (61%), Gaps = 11/419 (2%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNRDDWSLTDKIKGG---RGKQAMRKIVD 1054
            K PT PWMK P+L+   E++++S   K K F   +   L+DK   G   RGK+AM+KIVD
Sbjct: 45   KSPTPPWMKVPLLLQPHELVDLSN-PKSKKFKP-EKHELSDKALMGKEVRGKRAMKKIVD 102

Query: 1053 SITKLDDL-TEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDLRMNPRMPWVVTQKVVFRRT 877
             + KL         ++     E +   + I         ++R   RMPW   +K  F + 
Sbjct: 103  RVEKLHKTQNSNETRVDSLNVENFGGYLEILKENE----EVRSKGRMPWEKDEKFGFVKV 158

Query: 876  KKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELAMVK 697
            K+E+ VTAA            + +A +++ W+KV KAGVT+ V+D+I   W+R ELAM+K
Sbjct: 159  KREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIK 218

Query: 696  FDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLH-----GSPS--NGSLKLNLV 538
            FDIPLCR MDRAREI+E KTGGLVV +KKD  VVYRG  H     GSPS      ++N V
Sbjct: 219  FDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLTTKGSPSLRTNHYEMNRV 278

Query: 537  PASDKISLSKAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAGMEEFFCHQLVQGTL 358
              + K  + +  V +   S+  L   A   ++I+           G+++  C QLV G+L
Sbjct: 279  ELATKGDIFR--VESNHSSSEMLNWNADHKDSIS----------TGIQDVNC-QLVNGSL 325

Query: 357  YEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADDELT 178
            YERE +RLLDGLGPRF+DWW  KPLPVDADLLPE +PGF  PFRLCPPH   +L D ELT
Sbjct: 326  YERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTDYELT 385

Query: 177  YLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            Y RKLA++LPTHF LGRN  L GLA+AI+KLWEK+ + KIA+K G+PNT+NE MA E+K
Sbjct: 386  YFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTDNEMMANELK 444


>ref|XP_006603055.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Glycine max]
            gi|571550194|ref|XP_006603056.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Glycine max]
            gi|571550197|ref|XP_006603057.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Glycine max]
          Length = 747

 Score =  340 bits (871), Expect = 1e-90
 Identities = 197/419 (47%), Positives = 259/419 (61%), Gaps = 11/419 (2%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNRDDWSLTDKIKGG---RGKQAMRKIVD 1054
            K PT PWMK P+L+   E++++S   K K F   +   L+DK   G   RGK+AM+KIVD
Sbjct: 45   KSPTPPWMKVPLLLQPHELVDLSN-PKSKKFKP-EKHELSDKALMGKEVRGKRAMKKIVD 102

Query: 1053 SITKLDDL-TEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDLRMNPRMPWVVTQKVVFRRT 877
             + KL         ++     E +   + I         ++R   RMPW   +K  F + 
Sbjct: 103  RVEKLHKTQNSNETRVDSLNVENFGGYLEILKENE----EVRSKGRMPWEKDEKFGFVKV 158

Query: 876  KKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELAMVK 697
            K+E+ VTAA            + +A +++ W+KV KAGVT+ V+D+I   W+R ELAM+K
Sbjct: 159  KREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIK 218

Query: 696  FDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLH-----GSPS--NGSLKLNLV 538
            FDIPLCR MDRAREI+E KTGGLVV +KKD  VVYRG  H     GSPS      ++N V
Sbjct: 219  FDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLTTKGSPSLRTNHYEMNRV 278

Query: 537  PASDKISLSKAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAGMEEFFCHQLVQGTL 358
              + K  + +  V +   S+  L   A   ++I+           G+++  C QLV G+L
Sbjct: 279  ELATKGDIFR--VESNHSSSEMLNWNADHKDSIS----------TGIQDVNC-QLVNGSL 325

Query: 357  YEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADDELT 178
            YERE +RLLDGLGPRF+DWW  KPLPVDADLLPE +PGF  PFRLCPPH   +L D ELT
Sbjct: 326  YERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTDYELT 385

Query: 177  YLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            Y RKLA++LPTHF LGRN  L GLA+AI+KLWEK+ + KIA+K G+PNT+NE MA E+K
Sbjct: 386  YFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTDNEMMANELK 444


>ref|XP_006603054.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 750

 Score =  340 bits (871), Expect = 1e-90
 Identities = 197/419 (47%), Positives = 259/419 (61%), Gaps = 11/419 (2%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNRDDWSLTDKIKGG---RGKQAMRKIVD 1054
            K PT PWMK P+L+   E++++S   K K F   +   L+DK   G   RGK+AM+KIVD
Sbjct: 45   KSPTPPWMKVPLLLQPHELVDLSN-PKSKKFKP-EKHELSDKALMGKEVRGKRAMKKIVD 102

Query: 1053 SITKLDDL-TEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDLRMNPRMPWVVTQKVVFRRT 877
             + KL         ++     E +   + I         ++R   RMPW   +K  F + 
Sbjct: 103  RVEKLHKTQNSNETRVDSLNVENFGGYLEILKENE----EVRSKGRMPWEKDEKFGFVKV 158

Query: 876  KKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELAMVK 697
            K+E+ VTAA            + +A +++ W+KV KAGVT+ V+D+I   W+R ELAM+K
Sbjct: 159  KREKAVTAAELTLDKALLRRLRNEAARMRTWIKVKKAGVTQDVVDQIKRTWRRNELAMIK 218

Query: 696  FDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLH-----GSPS--NGSLKLNLV 538
            FDIPLCR MDRAREI+E KTGGLVV +KKD  VVYRG  H     GSPS      ++N V
Sbjct: 219  FDIPLCRNMDRAREIVETKTGGLVVLSKKDFLVVYRGCNHQLTTKGSPSLRTNHYEMNRV 278

Query: 537  PASDKISLSKAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAGMEEFFCHQLVQGTL 358
              + K  + +  V +   S+  L   A   ++I+           G+++  C QLV G+L
Sbjct: 279  ELATKGDIFR--VESNHSSSEMLNWNADHKDSIS----------TGIQDVNC-QLVNGSL 325

Query: 357  YEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADDELT 178
            YERE +RLLDGLGPRF+DWW  KPLPVDADLLPE +PGF  PFRLCPPH   +L D ELT
Sbjct: 326  YERETERLLDGLGPRFIDWWMHKPLPVDADLLPEEVPGFQPPFRLCPPHSSAKLTDYELT 385

Query: 177  YLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            Y RKLA++LPTHF LGRN  L GLA+AI+KLWEK+ + KIA+K G+PNT+NE MA E+K
Sbjct: 386  YFRKLAQSLPTHFVLGRNKGLKGLASAILKLWEKSLIAKIAIKYGIPNTDNEMMANELK 444


>ref|XP_007033221.1| maize chloroplast splicing factor CRS1, putative isoform 5 [Theobroma
            cacao] gi|508712250|gb|EOY04147.1| maize chloroplast
            splicing factor CRS1, putative isoform 5 [Theobroma
            cacao]
          Length = 788

 Score =  339 bits (869), Expect = 2e-90
 Identities = 200/427 (46%), Positives = 261/427 (61%), Gaps = 19/427 (4%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNR---DDWSLTDKIKGGRGKQAMRKIVD 1054
            KMPTAPWMK P+L+   EVLN S+    K+ N++    D +L  K  G RGK+ M+KI+ 
Sbjct: 89   KMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKAKAPDKALFGKESGVRGKKVMKKIIR 148

Query: 1053 SITKL--DDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDL-RMNPRMPWV-VTQKVVF 886
            ++  L  +++ E   Q+  +E    +F V           ++ R + +MPW+   +KVVF
Sbjct: 149  NVEMLQGNEVLEDT-QIGIRE----EFEVGNWLEEFGSDGEVKRFDGKMPWLREEEKVVF 203

Query: 885  RRTKKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELA 706
            RR KKE+++T A            +  A +++KW+KV K GVT+AV+DEI + W++ EL 
Sbjct: 204  RRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELV 263

Query: 705  MVKFDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSN-GSLKLNLVPAS 529
            MVKF +PLCR MDRAREIIE+KT GLVVW KKD  VVYRG  HG  S   S+K       
Sbjct: 264  MVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPRCADG 323

Query: 528  DKISLSKAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAG-----------MEEFFC 382
             +IS S    L       S  N  +  E   G +L+   +              M+E   
Sbjct: 324  QEISSSTFSHLT------SSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDEN 377

Query: 381  HQLVQGTLYEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRL 202
            +Q V G+LYERE DRLLDGLGPRF+DWW  KPLP+DADLLPE +PGF  P RL PP+ R 
Sbjct: 378  NQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRP 437

Query: 201  QLADDELTYLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNE 22
             L DDEL YLRKL   LP HFALG+N  L GLAAAI+KLWEK+ + KIA+K G+ NT+NE
Sbjct: 438  NLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNE 497

Query: 21   QMAWEIK 1
            QMA+E+K
Sbjct: 498  QMAYELK 504


>ref|XP_007033220.1| maize chloroplast splicing factor CRS1, putative isoform 4 [Theobroma
            cacao] gi|508712249|gb|EOY04146.1| maize chloroplast
            splicing factor CRS1, putative isoform 4 [Theobroma
            cacao]
          Length = 767

 Score =  339 bits (869), Expect = 2e-90
 Identities = 200/427 (46%), Positives = 261/427 (61%), Gaps = 19/427 (4%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNR---DDWSLTDKIKGGRGKQAMRKIVD 1054
            KMPTAPWMK P+L+   EVLN S+    K+ N++    D +L  K  G RGK+ M+KI+ 
Sbjct: 63   KMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKAKAPDKALFGKESGVRGKKVMKKIIR 122

Query: 1053 SITKL--DDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDL-RMNPRMPWV-VTQKVVF 886
            ++  L  +++ E   Q+  +E    +F V           ++ R + +MPW+   +KVVF
Sbjct: 123  NVEMLQGNEVLEDT-QIGIRE----EFEVGNWLEEFGSDGEVKRFDGKMPWLREEEKVVF 177

Query: 885  RRTKKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELA 706
            RR KKE+++T A            +  A +++KW+KV K GVT+AV+DEI + W++ EL 
Sbjct: 178  RRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELV 237

Query: 705  MVKFDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSN-GSLKLNLVPAS 529
            MVKF +PLCR MDRAREIIE+KT GLVVW KKD  VVYRG  HG  S   S+K       
Sbjct: 238  MVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPRCADG 297

Query: 528  DKISLSKAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAG-----------MEEFFC 382
             +IS S    L       S  N  +  E   G +L+   +              M+E   
Sbjct: 298  QEISSSTFSHLT------SSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDEN 351

Query: 381  HQLVQGTLYEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRL 202
            +Q V G+LYERE DRLLDGLGPRF+DWW  KPLP+DADLLPE +PGF  P RL PP+ R 
Sbjct: 352  NQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRP 411

Query: 201  QLADDELTYLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNE 22
             L DDEL YLRKL   LP HFALG+N  L GLAAAI+KLWEK+ + KIA+K G+ NT+NE
Sbjct: 412  NLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNE 471

Query: 21   QMAWEIK 1
            QMA+E+K
Sbjct: 472  QMAYELK 478


>ref|XP_007033219.1| maize chloroplast splicing factor CRS1, putative isoform 3 [Theobroma
            cacao] gi|508712248|gb|EOY04145.1| maize chloroplast
            splicing factor CRS1, putative isoform 3 [Theobroma
            cacao]
          Length = 788

 Score =  339 bits (869), Expect = 2e-90
 Identities = 200/427 (46%), Positives = 261/427 (61%), Gaps = 19/427 (4%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNR---DDWSLTDKIKGGRGKQAMRKIVD 1054
            KMPTAPWMK P+L+   EVLN S+    K+ N++    D +L  K  G RGK+ M+KI+ 
Sbjct: 63   KMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKAKAPDKALFGKESGVRGKKVMKKIIR 122

Query: 1053 SITKL--DDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDL-RMNPRMPWV-VTQKVVF 886
            ++  L  +++ E   Q+  +E    +F V           ++ R + +MPW+   +KVVF
Sbjct: 123  NVEMLQGNEVLEDT-QIGIRE----EFEVGNWLEEFGSDGEVKRFDGKMPWLREEEKVVF 177

Query: 885  RRTKKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELA 706
            RR KKE+++T A            +  A +++KW+KV K GVT+AV+DEI + W++ EL 
Sbjct: 178  RRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELV 237

Query: 705  MVKFDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSN-GSLKLNLVPAS 529
            MVKF +PLCR MDRAREIIE+KT GLVVW KKD  VVYRG  HG  S   S+K       
Sbjct: 238  MVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPRCADG 297

Query: 528  DKISLSKAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAG-----------MEEFFC 382
             +IS S    L       S  N  +  E   G +L+   +              M+E   
Sbjct: 298  QEISSSTFSHLT------SSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDEN 351

Query: 381  HQLVQGTLYEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRL 202
            +Q V G+LYERE DRLLDGLGPRF+DWW  KPLP+DADLLPE +PGF  P RL PP+ R 
Sbjct: 352  NQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRP 411

Query: 201  QLADDELTYLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNE 22
             L DDEL YLRKL   LP HFALG+N  L GLAAAI+KLWEK+ + KIA+K G+ NT+NE
Sbjct: 412  NLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNE 471

Query: 21   QMAWEIK 1
            QMA+E+K
Sbjct: 472  QMAYELK 478


>ref|XP_007033218.1| maize chloroplast splicing factor CRS1, putative isoform 2 [Theobroma
            cacao] gi|508712247|gb|EOY04144.1| maize chloroplast
            splicing factor CRS1, putative isoform 2 [Theobroma
            cacao]
          Length = 804

 Score =  339 bits (869), Expect = 2e-90
 Identities = 200/427 (46%), Positives = 261/427 (61%), Gaps = 19/427 (4%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNR---DDWSLTDKIKGGRGKQAMRKIVD 1054
            KMPTAPWMK P+L+   EVLN S+    K+ N++    D +L  K  G RGK+ M+KI+ 
Sbjct: 89   KMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKAKAPDKALFGKESGVRGKKVMKKIIR 148

Query: 1053 SITKL--DDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDL-RMNPRMPWV-VTQKVVF 886
            ++  L  +++ E   Q+  +E    +F V           ++ R + +MPW+   +KVVF
Sbjct: 149  NVEMLQGNEVLEDT-QIGIRE----EFEVGNWLEEFGSDGEVKRFDGKMPWLREEEKVVF 203

Query: 885  RRTKKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELA 706
            RR KKE+++T A            +  A +++KW+KV K GVT+AV+DEI + W++ EL 
Sbjct: 204  RRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELV 263

Query: 705  MVKFDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSN-GSLKLNLVPAS 529
            MVKF +PLCR MDRAREIIE+KT GLVVW KKD  VVYRG  HG  S   S+K       
Sbjct: 264  MVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPRCADG 323

Query: 528  DKISLSKAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAG-----------MEEFFC 382
             +IS S    L       S  N  +  E   G +L+   +              M+E   
Sbjct: 324  QEISSSTFSHLT------SSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDEN 377

Query: 381  HQLVQGTLYEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRL 202
            +Q V G+LYERE DRLLDGLGPRF+DWW  KPLP+DADLLPE +PGF  P RL PP+ R 
Sbjct: 378  NQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRP 437

Query: 201  QLADDELTYLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNE 22
             L DDEL YLRKL   LP HFALG+N  L GLAAAI+KLWEK+ + KIA+K G+ NT+NE
Sbjct: 438  NLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNE 497

Query: 21   QMAWEIK 1
            QMA+E+K
Sbjct: 498  QMAYELK 504


>ref|XP_007033217.1| maize chloroplast splicing factor CRS1, putative isoform 1 [Theobroma
            cacao] gi|508712246|gb|EOY04143.1| maize chloroplast
            splicing factor CRS1, putative isoform 1 [Theobroma
            cacao]
          Length = 818

 Score =  339 bits (869), Expect = 2e-90
 Identities = 200/427 (46%), Positives = 261/427 (61%), Gaps = 19/427 (4%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNR---DDWSLTDKIKGGRGKQAMRKIVD 1054
            KMPTAPWMK P+L+   EVLN S+    K+ N++    D +L  K  G RGK+ M+KI+ 
Sbjct: 89   KMPTAPWMKGPLLLQPHEVLNPSKSTSKKSSNSKAKAPDKALFGKESGVRGKKVMKKIIR 148

Query: 1053 SITKL--DDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDL-RMNPRMPWV-VTQKVVF 886
            ++  L  +++ E   Q+  +E    +F V           ++ R + +MPW+   +KVVF
Sbjct: 149  NVEMLQGNEVLEDT-QIGIRE----EFEVGNWLEEFGSDGEVKRFDGKMPWLREEEKVVF 203

Query: 885  RRTKKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELA 706
            RR KKE+++T A            +  A +++KW+KV K GVT+AV+DEI + W++ EL 
Sbjct: 204  RRMKKEKLLTQAEISLDKDLLERLRRKAMRMRKWIKVMKLGVTKAVVDEIKLAWRKNELV 263

Query: 705  MVKFDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSN-GSLKLNLVPAS 529
            MVKF +PLCR MDRAREIIE+KT GLVVW KKD  VVYRG  HG  S   S+K       
Sbjct: 264  MVKFGVPLCRNMDRAREIIEMKTRGLVVWGKKDALVVYRGCSHGLTSKISSMKYPRCADG 323

Query: 528  DKISLSKAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAG-----------MEEFFC 382
             +IS S    L       S  N  +  E   G +L+   +              M+E   
Sbjct: 324  QEISSSTFSHLT------SSNNINMSLEKFNGSTLQSGLYREDREKESMPINIFMKEDEN 377

Query: 381  HQLVQGTLYEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRL 202
            +Q V G+LYERE DRLLDGLGPRF+DWW  KPLP+DADLLPE +PGF  P RL PP+ R 
Sbjct: 378  NQPVIGSLYERETDRLLDGLGPRFIDWWMRKPLPIDADLLPEEVPGFRPPLRLSPPNTRP 437

Query: 201  QLADDELTYLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNE 22
             L DDEL YLRKL   LP HFALG+N  L GLAAAI+KLWEK+ + KIA+K G+ NT+NE
Sbjct: 438  NLTDDELKYLRKLTHPLPFHFALGKNRNLQGLAAAILKLWEKSLIAKIAIKWGIQNTDNE 497

Query: 21   QMAWEIK 1
            QMA+E+K
Sbjct: 498  QMAYELK 504


>ref|XP_007139175.1| hypothetical protein PHAVU_008G007700g [Phaseolus vulgaris]
            gi|561012308|gb|ESW11169.1| hypothetical protein
            PHAVU_008G007700g [Phaseolus vulgaris]
          Length = 744

 Score =  327 bits (838), Expect = 9e-87
 Identities = 189/416 (45%), Positives = 250/416 (60%), Gaps = 8/416 (1%)
 Frame = -2

Query: 1224 KMPTAPWMKEPILIPSDEVLNISRIRKLKNFNNRDDWSLTDKI-KGGRGKQAMRKIVDSI 1048
            K PT PWMK P+L+  +E+L++S  +  K    R + S  D + K  RGK+ M+KIV+ +
Sbjct: 41   KGPTPPWMKGPLLLQPNELLDLSNPKSKKFKLERQELSDKDLMGKEARGKKTMKKIVEKV 100

Query: 1047 TKLDDLTEKRGQL---PQKEAEGYDFSVPIXXXXXXXXEDLRMNPRMPWVVTQKVVFRRT 877
             KL       G L   P  E  G      +        E  R   RMPW    K V+ + 
Sbjct: 101  EKLHGTHNSAGALIGSPNVENIG-----GVLDSLKENEEVRRTKGRMPWENDWKFVYEKI 155

Query: 876  KKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGELAMVK 697
            K++R VTAA            + +A  ++ W+KV KAGVT+ V+D+I   W+R ELAMVK
Sbjct: 156  KRKRTVTAAELTLDKVLFRRLRNEAATMRTWIKVKKAGVTQDVVDQIKWTWRRNELAMVK 215

Query: 696  FDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSNG--SLKLNL--VPAS 529
            FDIPLCR M RAREI+E KTGGLVV +KKD  VVY G  H   + G  SL+ N   +  +
Sbjct: 216  FDIPLCRNMSRAREIVETKTGGLVVLSKKDFLVVYHGGNHQLTTTGYPSLRTNHSEMSGA 275

Query: 528  DKISLSKAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAGMEEFFCHQLVQGTLYER 349
            +  +      ++ + S   + N   +D++    S E++ +F         Q   G+LYER
Sbjct: 276  ELATTGDICSVDSNHSLSEMLNFIAEDKDSIATS-EQNMNF---------QTANGSLYER 325

Query: 348  EADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADDELTYLR 169
            E DRLLD LGPRF+DWW  KPLPVDADLLPE +PGF  P R+CPPH   +L+D ELTY R
Sbjct: 326  ETDRLLDDLGPRFIDWWMAKPLPVDADLLPEDVPGFQPPLRICPPHSCAKLSDYELTYFR 385

Query: 168  KLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            KLA+ LPTHF LGRN +L GLAAAI+KLWEK+ + KI++K G+PNT+NE MA E+K
Sbjct: 386  KLAQLLPTHFVLGRNKRLKGLAAAILKLWEKSLIAKISIKYGIPNTDNEMMANELK 441


>ref|XP_004507538.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 764

 Score =  327 bits (837), Expect = 1e-86
 Identities = 185/419 (44%), Positives = 243/419 (57%), Gaps = 11/419 (2%)
 Frame = -2

Query: 1224 KMPTAPWMKEPI-LIPSDEVLNISRIRKLKNFNNRDDWSLTDKIKGGR---GKQAMRKIV 1057
            K PT PW+K P+ L P   +LN          +N +   L+DK    +   GK+ +RKI 
Sbjct: 55   KSPTPPWIKSPLHLQPQQHLLN----------SNVEKSDLSDKALNSKEISGKKVLRKIA 104

Query: 1056 DSITKL-----DDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDLRMNPRMPWVVTQKV 892
              + KL      +  E   Q+  ++ E +   + I         ++    RMPW   +K+
Sbjct: 105  HKVEKLHKALDSEKNETLTQMGSEKVENFGDCLDILMENE----EVVNKGRMPWEKDEKI 160

Query: 891  VFRRTKKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGE 712
             F + K+E+  +AA            + +A +++KWVKV K GVT+ V+DEI   W+  E
Sbjct: 161  GFFKVKREKTFSAADLNVDKVVLHRLRGEAARMRKWVKVKKIGVTQDVVDEIKRSWRMNE 220

Query: 711  LAMVKFDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSNGSLKLNLVPA 532
            LAMVKFDIPLC+ M RAREI+E KTGGLV+W KKDT VVYRG  +   S  S K++    
Sbjct: 221  LAMVKFDIPLCQNMGRAREIVETKTGGLVIWCKKDTLVVYRGCNYQLTSKSSPKIHTGYI 280

Query: 531  SDKISLSKAVVLNEDVSAGSLTN--RAVQDENITGKSLEESTHFAGMEEFFCHQLVQGTL 358
              + + S      +  + G L+          I   + E     +       +Q   G+L
Sbjct: 281  RSQKTNSYETNEVKSATKGDLSRVESTQSSSEILSSNAEHKDSLSTDNYNMNYQPRSGSL 340

Query: 357  YEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADDELT 178
            YE+E DRLLDGLGPRFVDWW  KPLPVDADLLPEV+PGF  PFRLCPPH R +L DDELT
Sbjct: 341  YEKECDRLLDGLGPRFVDWWMDKPLPVDADLLPEVVPGFEPPFRLCPPHARSKLTDDELT 400

Query: 177  YLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            Y RK++  LPTHF LGRN  L GLAAAI+KLW+K+H  KIA+K GVPNT+NE MA E+K
Sbjct: 401  YFRKISHPLPTHFVLGRNRGLQGLAAAILKLWQKSHTAKIAIKYGVPNTDNEVMANELK 459


>ref|XP_004138635.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 760

 Score =  312 bits (799), Expect = 3e-82
 Identities = 188/419 (44%), Positives = 246/419 (58%), Gaps = 14/419 (3%)
 Frame = -2

Query: 1215 TAPWMKEPILIPSDEVLNISRIRKLKNFNNRDDWSLTDKIKGG--------RGKQAMRKI 1060
            TAPWMK P+ +   +              N  D S  DK             GK AMR+I
Sbjct: 62   TAPWMKAPLHLQPQQQEEEGVDPANPKRRNGSDGSGRDKCSRALGDSGIDKTGKYAMRRI 121

Query: 1059 VDSITKL---DDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDLRMNPRMPWVVTQKVV 889
              SI KL    DL E R +L + E  G+D             E+     RMPW      +
Sbjct: 122  AKSIGKLRRNGDLGETRMKLEEVEFGGFDLE---------GFEESGTRRRMPWEKDDDGI 172

Query: 888  FRRTKKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGEL 709
              R  K++ VT+A            K +A K++KWVKV K GVT+ V+++I  +W+R EL
Sbjct: 173  VLRRMKKKTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNQIQFMWERNEL 232

Query: 708  AMVKFDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSNGSLK--LNLVP 535
            AM+KFD+PL R MDRAREI+E+KTGG+VVW+KK+  VVYRG  +      S K  +++ P
Sbjct: 233  AMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVVYRGCNYPLNLKHSTKKQVHISP 292

Query: 534  ASD-KISLSKAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAGMEEFFCHQLVQGTL 358
             +  K+       L+    +G   NR++ D +  G+  E S+ F    E    Q + G+L
Sbjct: 293  QNPVKVETDTHFSLSGHYESG--LNRSINDND--GEWEEASSFFLIRHENL--QPLSGSL 346

Query: 357  YEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADDELT 178
            YERE DRLLD LGPRF+DWW  KPLPVDAD+LPEV+PG+M PFR CPP+ +  L D  L 
Sbjct: 347  YERETDRLLDDLGPRFIDWWMHKPLPVDADMLPEVVPGYMPPFRRCPPYTKQNLTDAGLQ 406

Query: 177  YLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            +LRKLA +LPTHF LGRN KL GLAA+I+KLWEK+ + KIA+K GVPNT+NEQMA E+K
Sbjct: 407  HLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTDNEQMALELK 465


>ref|XP_004158502.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
            splicing facilitator CRS1, chloroplastic-like [Cucumis
            sativus]
          Length = 760

 Score =  306 bits (783), Expect = 2e-80
 Identities = 185/419 (44%), Positives = 244/419 (58%), Gaps = 14/419 (3%)
 Frame = -2

Query: 1215 TAPWMKEPILIPSDEVLNISRIRKLKNFNNRDDWSLTDKIKGG--------RGKQAMRKI 1060
            TAPWMK P+ +   +              N  D S  DK             GK AMR+I
Sbjct: 62   TAPWMKAPLHLQPQQQEEEGVDPANPKRRNGSDGSGRDKCSRALGDSGIDKTGKYAMRRI 121

Query: 1059 VDSITKL---DDLTEKRGQLPQKEAEGYDFSVPIXXXXXXXXEDLRMNPRMPWVVTQKVV 889
              SI KL    DL E R +L + E   +D             E+     RMPW      +
Sbjct: 122  AKSIGKLRRNGDLGETRMKLEEVEFGDFDLE---------GFEESGTRRRMPWEKDDDGI 172

Query: 888  FRRTKKERVVTAAXXXXXXXXXXXXKCDAEKIKKWVKVPKAGVTEAVIDEINVIWKRGEL 709
              R  K++ VT+A            K +A K++KWVKV K GVT+ V+++I  +W+R EL
Sbjct: 173  VLRRMKKKTVTSAELNLDRVLLERLKGEASKMEKWVKVNKVGVTQDVVNQIQFMWERNEL 232

Query: 708  AMVKFDIPLCRYMDRAREIIELKTGGLVVWTKKDTHVVYRGLLHGSPSNGSLK--LNLVP 535
            AM+KFD+PL R MDRAREI+E+KTGG+VVW+KK+  V+YRG  +      S K  +++ P
Sbjct: 233  AMLKFDVPLSRNMDRAREIVEMKTGGMVVWSKKNALVIYRGCNYPLNLKHSTKKQVHISP 292

Query: 534  ASD-KISLSKAVVLNEDVSAGSLTNRAVQDENITGKSLEESTHFAGMEEFFCHQLVQGTL 358
             +  K+       L+    +G   NR++ D +  G+  E S+ F    E    Q + G+L
Sbjct: 293  QNPVKVETDTHFSLSGHYESG--LNRSINDND--GEWEEASSFFLIRHENL--QPLSGSL 346

Query: 357  YEREADRLLDGLGPRFVDWWWPKPLPVDADLLPEVIPGFMTPFRLCPPHVRLQLADDELT 178
            YERE DRLLD LGPRF+DWW  KPLPVDAD+L EV+PG+M PFR CPP+ +  L D  L 
Sbjct: 347  YERETDRLLDDLGPRFIDWWMHKPLPVDADMLQEVVPGYMPPFRRCPPYTKQNLTDAGLQ 406

Query: 177  YLRKLARALPTHFALGRNTKLHGLAAAIIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            +LRKLA +LPTHF LGRN KL GLAA+I+KLWEK+ + KIA+K GVPNT+NEQMA E+K
Sbjct: 407  HLRKLAHSLPTHFVLGRNRKLQGLAASILKLWEKSMIAKIALKWGVPNTDNEQMALELK 465


>ref|XP_004973284.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Setaria italica]
          Length = 748

 Score =  295 bits (754), Expect = 5e-77
 Identities = 177/392 (45%), Positives = 229/392 (58%), Gaps = 22/392 (5%)
 Frame = -2

Query: 1110 LTDKIKGGRGKQAMRKIVDSITKLDDLTEKRGQLP-----QKEAEGYDFSVPIXXXXXXX 946
            LT  + GGR ++A+  I+  +  L+ L++  G +P        A    F +PI       
Sbjct: 73   LTAGVPGGRTRRAVLGIIRRVRSLE-LSDPPGPVPAPARNNDAAAAVPFHLPIEPREQAR 131

Query: 945  XEDLRMNPR-MPWVVTQ----KVVFRRTKKERVVTAAXXXXXXXXXXXXKCDAEKIKKWV 781
                +   R +PW   +    KV  RR KK R  T A            +  A  + +W 
Sbjct: 132  EAVEKGKARAVPWAAARDEGLKVALRREKKAREPTRAEAELEAGELDRLQRLARGMGRWA 191

Query: 780  KVPKAGVTEAVIDEINVIWKRGE-LAMVKFDIPLCRYMDRAREIIELKTGGLVVWTKKDT 604
            +  KAGVT+ V++++   W RGE LA V+   PL R MDRAREI+E+KTGGLV+WTK D 
Sbjct: 192  RAKKAGVTDEVVEDLRREWARGEELAAVRIVEPLRRNMDRAREILEIKTGGLVIWTKGDI 251

Query: 603  HVVYRG------LLHGSPSNGSLKLNLVPASDKISLSKAVVLNED---VSAGSLTNRAVQ 451
            H VYRG      + H   S  S++ N+ P    +  ++    NE        S  +  +Q
Sbjct: 252  HFVYRGSNYQQNMKHSQYSVASVQ-NVSPVKYNVHRAQIKYGNEGEVLTDGNSKGDDVIQ 310

Query: 450  --DENITGKSLEESTHFAGMEEFFCHQLVQGTLYEREADRLLDGLGPRFVDWWWPKPLPV 277
              D+++ G+  EE               ++GTLYERE +RLLD LGPRFVDWWW  PLPV
Sbjct: 311  ENDQSVCGQKDEEP--------------IKGTLYEREVNRLLDSLGPRFVDWWWNTPLPV 356

Query: 276  DADLLPEVIPGFMTPFRLCPPHVRLQLADDELTYLRKLARALPTHFALGRNTKLHGLAAA 97
            DADLLPE +PGF TPFR CPP VR  LAD+ELTYLRKLAR LPTHFALGRN++L GLAAA
Sbjct: 357  DADLLPEFVPGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNSRLQGLAAA 416

Query: 96   IIKLWEKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            I+KLWEK+ + KIAVKVG+ NTNNEQMAW +K
Sbjct: 417  ILKLWEKSLIAKIAVKVGIQNTNNEQMAWNLK 448


>ref|XP_004973285.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Setaria italica]
          Length = 736

 Score =  293 bits (750), Expect = 1e-76
 Identities = 175/387 (45%), Positives = 223/387 (57%), Gaps = 17/387 (4%)
 Frame = -2

Query: 1110 LTDKIKGGRGKQAMRKIVDSITKLDDLTEKRGQLP-----QKEAEGYDFSVPIXXXXXXX 946
            LT  + GGR ++A+  I+  +  L+ L++  G +P        A    F +PI       
Sbjct: 73   LTAGVPGGRTRRAVLGIIRRVRSLE-LSDPPGPVPAPARNNDAAAAVPFHLPIEPREQAR 131

Query: 945  XEDLRMNPR-MPWVVTQ----KVVFRRTKKERVVTAAXXXXXXXXXXXXKCDAEKIKKWV 781
                +   R +PW   +    KV  RR KK R  T A            +  A  + +W 
Sbjct: 132  EAVEKGKARAVPWAAARDEGLKVALRREKKAREPTRAEAELEAGELDRLQRLARGMGRWA 191

Query: 780  KVPKAGVTEAVIDEINVIWKRGE-LAMVKFDIPLCRYMDRAREIIELKTGGLVVWTKKDT 604
            +  KAGVT+ V++++   W RGE LA V+   PL R MDRAREI+E+KTGGLV+WTK D 
Sbjct: 192  RAKKAGVTDEVVEDLRREWARGEELAAVRIVEPLRRNMDRAREILEIKTGGLVIWTKGDI 251

Query: 603  HVVYRG------LLHGSPSNGSLKLNLVPASDKISLSKAVVLNEDVSAGSLTNRAVQDEN 442
            H VYRG      + H   S  S++ N+ P    +  ++    NE           + D N
Sbjct: 252  HFVYRGSNYQQNMKHSQYSVASVQ-NVSPVKYNVHRAQIKYGNE--------GEVLTDGN 302

Query: 441  ITGKSLEESTHFAGMEEFFCHQLVQGTLYEREADRLLDGLGPRFVDWWWPKPLPVDADLL 262
              G   +E               ++GTLYERE +RLLD LGPRFVDWWW  PLPVDADLL
Sbjct: 303  SKGDDKDEEP-------------IKGTLYEREVNRLLDSLGPRFVDWWWNTPLPVDADLL 349

Query: 261  PEVIPGFMTPFRLCPPHVRLQLADDELTYLRKLARALPTHFALGRNTKLHGLAAAIIKLW 82
            PE +PGF TPFR CPP VR  LAD+ELTYLRKLAR LPTHFALGRN++L GLAAAI+KLW
Sbjct: 350  PEFVPGFKTPFRQCPPGVRPTLADEELTYLRKLARPLPTHFALGRNSRLQGLAAAILKLW 409

Query: 81   EKTHVVKIAVKVGVPNTNNEQMAWEIK 1
            EK+ + KIAVKVG+ NTNNEQMAW +K
Sbjct: 410  EKSLIAKIAVKVGIQNTNNEQMAWNLK 436