BLASTX nr result
ID: Papaver27_contig00010829
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00010829
(495 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp... 114 2e-23
ref|NP_001154225.2| transcription initiation factor IIF subunit ... 105 8e-21
gb|AAR28013.1| mutant TFIIF-alpha [Arabidopsis thaliana] 105 8e-21
sp|Q9SU25.1|T2FA_ARATH RecName: Full=Transcription initiation fa... 105 8e-21
gb|EXB41552.1| Transcription initiation factor IIF subunit alpha... 86 4e-15
emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera] 86 7e-15
ref|XP_002308775.1| transcription initiation factor IIF alpha su... 85 9e-15
ref|XP_007026250.1| Transcription activators,DNA binding,RNA pol... 85 1e-14
ref|XP_007026249.1| Transcription activators,DNA binding,RNA pol... 85 1e-14
ref|XP_007026248.1| Transcription activators,DNA binding,RNA pol... 85 1e-14
ref|XP_007026247.1| Transcription activators,DNA binding,RNA pol... 85 1e-14
ref|XP_002262798.2| PREDICTED: transcription initiation factor I... 85 1e-14
emb|CBI33123.3| unnamed protein product [Vitis vinifera] 85 1e-14
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu... 84 3e-14
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|... 84 3e-14
gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus... 83 4e-14
gb|EYU27711.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus... 83 4e-14
ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis] gi|... 81 2e-13
ref|XP_006352367.1| PREDICTED: transcription initiation factor I... 80 3e-13
ref|XP_006352364.1| PREDICTED: transcription initiation factor I... 80 3e-13
>ref|XP_002872663.1| mutant TFIIF-alpha [Arabidopsis lyrata subsp. lyrata]
gi|297318500|gb|EFH48922.1| mutant TFIIF-alpha
[Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 114 bits (284), Expect = 2e-23
Identities = 71/148 (47%), Positives = 98/148 (66%), Gaps = 8/148 (5%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRK-SDEANYVVLR 179
TE+EIRAVL+E +TTQ LV+ F RLK+KE+KNAF ILR+ISKI+K + N+VVLR
Sbjct: 481 TEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLR 540
Query: 180 DNNAITSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDK 359
+N S S + P VTE+E+RSVL+++ L T LV F+ERL ++E+K
Sbjct: 541 EN-------CESCSNRQPR--KMEHVTEDELRSVLMETKQLTTLELVMRFKERLTTREEK 591
Query: 360 NAFAAILSRISKVQK-------FVVLRD 422
+ FA IL +I+K+QK F+VLR+
Sbjct: 592 DTFAHILKKIAKLQKNAGSLKYFLVLRE 619
Score = 74.7 bits (182), Expect = 1e-11
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Frame = +3
Query: 147 KSDEANYVVLRDNNAITSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAE 326
K + AN V + + +S+ A + +TG VTE+EIR+VL++ + TQ LV+
Sbjct: 444 KEERANTVSKSNTPTKAVKAEPASAPAASSSAATGPVTEDEIRAVLMEKKQVTTQDLVSR 503
Query: 327 FRERLKSKEDKNAFAAILSRISKVQK------FVVLRD 422
F+ RLK+KEDKNAFA IL +ISK+QK FVVLR+
Sbjct: 504 FKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLRE 541
>ref|NP_001154225.2| transcription initiation factor IIF subunit alpha [Arabidopsis
thaliana] gi|332657756|gb|AEE83156.1| transcription
initiation factor IIF subunit alpha [Arabidopsis
thaliana]
Length = 506
Score = 105 bits (261), Expect = 8e-21
Identities = 69/157 (43%), Positives = 97/157 (61%), Gaps = 17/157 (10%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRK-SDEANYVVLR 179
TE+EIRAVL+E +TTQ LV+ F RLK+KE+KNAF ILR+ISKI+K + N+VVLR
Sbjct: 339 TEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLR 398
Query: 180 D---------NNAITSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFR 332
+ + + ++ S+ + VTE+EIR VL++ L T LV F+
Sbjct: 399 EKCQPKPGKRESRVNKLNIRSNLQPRKME----LVTEDEIRKVLMEKKQLTTLELVMRFK 454
Query: 333 ERLKSKEDKNAFAAILSRISKVQK-------FVVLRD 422
ERL + EDK++F+ IL +I+K+QK VVLRD
Sbjct: 455 ERLTTTEDKDSFSHILKKIAKLQKNPGSEKFVVVLRD 491
Score = 75.5 bits (184), Expect = 7e-12
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 6/99 (6%)
Frame = +3
Query: 147 KSDEANYVVLRDNNAITSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAE 326
K + AN V + + +S+ + + +TG VTE+EIR+VL++ + TQ LV+
Sbjct: 302 KEERANTVSKSNTPTKAVKAEPASAPASSSSAATGPVTEDEIRAVLMEKKQVTTQDLVSR 361
Query: 327 FRERLKSKEDKNAFAAILSRISKVQK------FVVLRDK 425
F+ RLK+KEDKNAFA IL +ISK+QK FVVLR+K
Sbjct: 362 FKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLREK 400
>gb|AAR28013.1| mutant TFIIF-alpha [Arabidopsis thaliana]
Length = 640
Score = 105 bits (261), Expect = 8e-21
Identities = 69/157 (43%), Positives = 97/157 (61%), Gaps = 17/157 (10%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRK-SDEANYVVLR 179
TE+EIRAVL+E +TTQ LV+ F RLK+KE+KNAF ILR+ISKI+K + N+VVLR
Sbjct: 482 TEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLR 541
Query: 180 D---------NNAITSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFR 332
+ + + ++ S+ + VTE+EIR VL++ L T LV F+
Sbjct: 542 EKCQPKPGKRESRVNKLNIRSNLQPRKME----LVTEDEIRKVLMEKKQLTTLELVMRFK 597
Query: 333 ERLKSKEDKNAFAAILSRISKVQK-------FVVLRD 422
ERL + EDK++F+ IL +I+K+QK VVLRD
Sbjct: 598 ERLTTTEDKDSFSHILKKITKLQKNPGSEKFVVVLRD 634
Score = 75.5 bits (184), Expect = 7e-12
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 6/99 (6%)
Frame = +3
Query: 147 KSDEANYVVLRDNNAITSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAE 326
K + AN V + + +S+ + + +TG VTE+EIR+VL++ + TQ LV+
Sbjct: 445 KEERANTVSKSNTPTKAVKAEPASAPASSSSAATGPVTEDEIRAVLMEKKQVTTQDLVSR 504
Query: 327 FRERLKSKEDKNAFAAILSRISKVQK------FVVLRDK 425
F+ RLK+KEDKNAFA IL +ISK+QK FVVLR+K
Sbjct: 505 FKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLREK 543
>sp|Q9SU25.1|T2FA_ARATH RecName: Full=Transcription initiation factor IIF subunit alpha;
Short=TFIIF-alpha; AltName: Full=General transcription
factor IIF subunit 1; AltName: Full=Transcription
initiation factor RAP74 homolog; Short=AtRAP74
gi|5823572|emb|CAB53754.1| putative protein [Arabidopsis
thaliana] gi|7267963|emb|CAB78304.1| putative protein
[Arabidopsis thaliana]
Length = 649
Score = 105 bits (261), Expect = 8e-21
Identities = 69/157 (43%), Positives = 97/157 (61%), Gaps = 17/157 (10%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRK-SDEANYVVLR 179
TE+EIRAVL+E +TTQ LV+ F RLK+KE+KNAF ILR+ISKI+K + N+VVLR
Sbjct: 482 TEDEIRAVLMEKKQVTTQDLVSRFKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLR 541
Query: 180 D---------NNAITSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFR 332
+ + + ++ S+ + VTE+EIR VL++ L T LV F+
Sbjct: 542 EKCQPKPGKRESRVNKLNIRSNLQPRKME----LVTEDEIRKVLMEKKQLTTLELVMRFK 597
Query: 333 ERLKSKEDKNAFAAILSRISKVQK-------FVVLRD 422
ERL + EDK++F+ IL +I+K+QK VVLRD
Sbjct: 598 ERLTTTEDKDSFSHILKKIAKLQKNPGSEKFVVVLRD 634
Score = 75.5 bits (184), Expect = 7e-12
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 6/99 (6%)
Frame = +3
Query: 147 KSDEANYVVLRDNNAITSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAE 326
K + AN V + + +S+ + + +TG VTE+EIR+VL++ + TQ LV+
Sbjct: 445 KEERANTVSKSNTPTKAVKAEPASAPASSSSAATGPVTEDEIRAVLMEKKQVTTQDLVSR 504
Query: 327 FRERLKSKEDKNAFAAILSRISKVQK------FVVLRDK 425
F+ RLK+KEDKNAFA IL +ISK+QK FVVLR+K
Sbjct: 505 FKARLKTKEDKNAFANILRKISKIQKNAGSQNFVVLREK 543
>gb|EXB41552.1| Transcription initiation factor IIF subunit alpha [Morus notabilis]
Length = 483
Score = 86.3 bits (212), Expect = 4e-15
Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 5/85 (5%)
Frame = +3
Query: 186 NAITSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNA 365
N + S+ SSSTKA S G VTEEEIR+VL++ P+ TQ LVA+FR RL++ DKNA
Sbjct: 399 NNVPSKGTPSSSTKAAVTSSAGPVTEEEIRAVLIQKTPVTTQDLVAKFRARLRTPADKNA 458
Query: 366 FAAILSRISKVQK-----FVVLRDK 425
FA IL RISK+QK +VVLR+K
Sbjct: 459 FAEILRRISKIQKTNGSNYVVLREK 483
Score = 72.8 bits (177), Expect = 5e-11
Identities = 37/60 (61%), Positives = 49/60 (81%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDEANYVVLRD 182
TEEEIRAVL++ +TTQ LVA+F RL++ +KNAF ILRRISKI+K++ +NYVVLR+
Sbjct: 423 TEEEIRAVLIQKTPVTTQDLVAKFRARLRTPADKNAFAEILRRISKIQKTNGSNYVVLRE 482
>emb|CAN65486.1| hypothetical protein VITISV_003680 [Vitis vinifera]
Length = 435
Score = 85.5 bits (210), Expect = 7e-15
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Frame = +3
Query: 195 TSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAA 374
T++ SSS K + S G VTE+EIR+VLL+ AP+ TQ LVA+F+ RLKS+EDK AFA
Sbjct: 354 TAKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFAD 413
Query: 375 ILSRISKVQK-----FVVLRDK 425
IL RISK+QK +VVLRDK
Sbjct: 414 ILRRISKIQKTNGPNYVVLRDK 435
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDEANYVVLRD 182
TE+EIRAVLL+ A +TTQ LVA+F RLKS+E+K AF ILRRISKI+K++ NYVVLRD
Sbjct: 375 TEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRD 434
>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
[Populus trichocarpa] gi|222854751|gb|EEE92298.1|
transcription initiation factor IIF alpha subunit family
protein [Populus trichocarpa]
Length = 541
Score = 85.1 bits (209), Expect = 9e-15
Identities = 50/108 (46%), Positives = 67/108 (62%), Gaps = 10/108 (9%)
Frame = +3
Query: 132 ISKIRKSDEANYVVLRDNNAITS-----RDLVSSSTKAPADPSTGRVTEEEIRSVLLKSA 296
+ K++ +E V +++ T + + SSS P TG VTEEEIR+VLL++
Sbjct: 433 VKKVKTENEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQNG 492
Query: 297 PLATQALVAEFRERLKSKEDKNAFAAILSRISKVQK-----FVVLRDK 425
P+ TQ LVA F+ RL++ EDK AFA IL RISK+QK FVVLRDK
Sbjct: 493 PVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRDK 540
Score = 73.2 bits (178), Expect = 4e-11
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDEANYVVLRD 182
TEEEIRAVLL++ +TTQ LVA F RL++ E+K AF ILRRISKI+K+ +N+VVLRD
Sbjct: 480 TEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRD 539
>ref|XP_007026250.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 4 [Theobroma cacao]
gi|508781616|gb|EOY28872.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 4 [Theobroma cacao]
Length = 480
Score = 84.7 bits (208), Expect = 1e-14
Identities = 49/83 (59%), Positives = 59/83 (71%), Gaps = 6/83 (7%)
Frame = +3
Query: 195 TSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAA 374
TS + SSS KA + + G VTEEEIR+VLL+ AP+ T LVA+F+ RLKS EDK AFA
Sbjct: 398 TSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFAD 457
Query: 375 ILSRISKVQK------FVVLRDK 425
IL RISK+QK +VVLRDK
Sbjct: 458 ILRRISKIQKTNGPNNYVVLRDK 480
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSD-EANYVVLR 179
TEEEIRAVLL+ A +TT LVA+F RLKS E+K AF ILRRISKI+K++ NYVVLR
Sbjct: 419 TEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTNGPNNYVVLR 478
Query: 180 D 182
D
Sbjct: 479 D 479
>ref|XP_007026249.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 3 [Theobroma cacao]
gi|508781615|gb|EOY28871.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 3 [Theobroma cacao]
Length = 496
Score = 84.7 bits (208), Expect = 1e-14
Identities = 49/83 (59%), Positives = 59/83 (71%), Gaps = 6/83 (7%)
Frame = +3
Query: 195 TSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAA 374
TS + SSS KA + + G VTEEEIR+VLL+ AP+ T LVA+F+ RLKS EDK AFA
Sbjct: 414 TSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFAD 473
Query: 375 ILSRISKVQK------FVVLRDK 425
IL RISK+QK +VVLRDK
Sbjct: 474 ILRRISKIQKTNGPNNYVVLRDK 496
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSD-EANYVVLR 179
TEEEIRAVLL+ A +TT LVA+F RLKS E+K AF ILRRISKI+K++ NYVVLR
Sbjct: 435 TEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTNGPNNYVVLR 494
Query: 180 D 182
D
Sbjct: 495 D 495
>ref|XP_007026248.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 2 [Theobroma cacao]
gi|508781614|gb|EOY28870.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 2 [Theobroma cacao]
Length = 473
Score = 84.7 bits (208), Expect = 1e-14
Identities = 49/83 (59%), Positives = 59/83 (71%), Gaps = 6/83 (7%)
Frame = +3
Query: 195 TSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAA 374
TS + SSS KA + + G VTEEEIR+VLL+ AP+ T LVA+F+ RLKS EDK AFA
Sbjct: 391 TSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFAD 450
Query: 375 ILSRISKVQK------FVVLRDK 425
IL RISK+QK +VVLRDK
Sbjct: 451 ILRRISKIQKTNGPNNYVVLRDK 473
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSD-EANYVVLR 179
TEEEIRAVLL+ A +TT LVA+F RLKS E+K AF ILRRISKI+K++ NYVVLR
Sbjct: 412 TEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTNGPNNYVVLR 471
Query: 180 D 182
D
Sbjct: 472 D 472
>ref|XP_007026247.1| Transcription activators,DNA binding,RNA polymerase II
transcription factors,catalytics,transcription
initiation factors isoform 1 [Theobroma cacao]
gi|508781613|gb|EOY28869.1| Transcription activators,DNA
binding,RNA polymerase II transcription
factors,catalytics,transcription initiation factors
isoform 1 [Theobroma cacao]
Length = 549
Score = 84.7 bits (208), Expect = 1e-14
Identities = 49/83 (59%), Positives = 59/83 (71%), Gaps = 6/83 (7%)
Frame = +3
Query: 195 TSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAA 374
TS + SSS KA + + G VTEEEIR+VLL+ AP+ T LVA+F+ RLKS EDK AFA
Sbjct: 467 TSSAVTSSSAKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFAD 526
Query: 375 ILSRISKVQK------FVVLRDK 425
IL RISK+QK +VVLRDK
Sbjct: 527 ILRRISKIQKTNGPNNYVVLRDK 549
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSD-EANYVVLR 179
TEEEIRAVLL+ A +TT LVA+F RLKS E+K AF ILRRISKI+K++ NYVVLR
Sbjct: 488 TEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQKTNGPNNYVVLR 547
Query: 180 D 182
D
Sbjct: 548 D 548
>ref|XP_002262798.2| PREDICTED: transcription initiation factor IIF subunit alpha-like
[Vitis vinifera]
Length = 534
Score = 84.7 bits (208), Expect = 1e-14
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 5/82 (6%)
Frame = +3
Query: 195 TSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAA 374
T + SSS K + S G VTE+EIR+VLL+ AP+ TQ LVA+F+ RLKS+EDK AFA
Sbjct: 453 TPKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFAD 512
Query: 375 ILSRISKVQK-----FVVLRDK 425
IL RISK+QK +VVLRDK
Sbjct: 513 ILRRISKIQKTNGPNYVVLRDK 534
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDEANYVVLRD 182
TE+EIRAVLL+ A +TTQ LVA+F RLKS+E+K AF ILRRISKI+K++ NYVVLRD
Sbjct: 474 TEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRD 533
>emb|CBI33123.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 84.7 bits (208), Expect = 1e-14
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 5/82 (6%)
Frame = +3
Query: 195 TSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAA 374
T + SSS K + S G VTE+EIR+VLL+ AP+ TQ LVA+F+ RLKS+EDK AFA
Sbjct: 458 TPKGTPSSSVKTGSTSSAGPVTEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFAD 517
Query: 375 ILSRISKVQK-----FVVLRDK 425
IL RISK+QK +VVLRDK
Sbjct: 518 ILRRISKIQKTNGPNYVVLRDK 539
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDEANYVVLRD 182
TE+EIRAVLL+ A +TTQ LVA+F RLKS+E+K AF ILRRISKI+K++ NYVVLRD
Sbjct: 479 TEDEIRAVLLQKAPVTTQDLVAKFKARLKSQEDKKAFADILRRISKIQKTNGPNYVVLRD 538
>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
gi|550335193|gb|ERP58675.1| hypothetical protein
POPTR_0006s01070g [Populus trichocarpa]
Length = 536
Score = 83.6 bits (205), Expect = 3e-14
Identities = 47/82 (57%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = +3
Query: 195 TSRDLVSSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAA 374
T + + SSS P TG VTEEEIR+VLL++ P+ TQ LVA F+ RL++ EDK AFA
Sbjct: 454 TPKIMPSSSKTGPTSGPTGPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFAD 513
Query: 375 ILSRISKVQK-----FVVLRDK 425
IL RISK+QK FVVLRDK
Sbjct: 514 ILRRISKIQKTSGSNFVVLRDK 535
Score = 73.2 bits (178), Expect = 4e-11
Identities = 38/60 (63%), Positives = 48/60 (80%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDEANYVVLRD 182
TEEEIRAVLL++ +TTQ LVA F RL++ E+K AF ILRRISKI+K+ +N+VVLRD
Sbjct: 475 TEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSNFVVLRD 534
>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis]
gi|223541454|gb|EEF43004.1| tfiif-alpha, putative
[Ricinus communis]
Length = 533
Score = 83.6 bits (205), Expect = 3e-14
Identities = 57/125 (45%), Positives = 76/125 (60%), Gaps = 10/125 (8%)
Frame = +3
Query: 81 RLKSKEEKNAFTAILRRISKIRKSDEANYVVLRDNNAITSRDLVSSSTKAPADPS----- 245
+L S E K A +++ K++ +++ +A TS+ SS+T A PS
Sbjct: 416 KLNSDEAKQTNVAPQKKV----KTENELKPTVKEESAPTSK---SSATPKAAPPSAKTGS 468
Query: 246 TGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAAILSRISKVQK-----FV 410
T VTEEEIR+VLL++ P+ TQ LVA F+ RLKS EDK AFA IL RISK+QK +V
Sbjct: 469 TSPVTEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYV 528
Query: 411 VLRDK 425
VLRDK
Sbjct: 529 VLRDK 533
Score = 75.5 bits (184), Expect = 7e-12
Identities = 40/60 (66%), Positives = 48/60 (80%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDEANYVVLRD 182
TEEEIRAVLL++ +TTQ LVA F RLKS E+K AF ILRRISKI+K+ ++YVVLRD
Sbjct: 473 TEEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSGSSYVVLRD 532
>gb|EYU27712.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus guttatus]
Length = 534
Score = 82.8 bits (203), Expect = 4e-14
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 13/126 (10%)
Frame = +3
Query: 87 KSKEEKNAFTAILRRISKIRKSDEANYVV-LRDNNAITSRDLVSSSTKAPADPS------ 245
KSK + N + + ++K+ N V ++D +S+ + P PS
Sbjct: 408 KSKRKSNGEESKTTNGAPLKKAKTENEVKSVKDEIGSSSKSSAPTKGATPPAPSVSASAP 467
Query: 246 -TGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAAILSRISKVQK-----F 407
TG VTEEEIR+VLL+ P+ TQ LVA+F+ RLK KEDK+AFAAIL RIS++QK F
Sbjct: 468 PTGPVTEEEIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANF 527
Query: 408 VVLRDK 425
VVLR++
Sbjct: 528 VVLRER 533
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/60 (66%), Positives = 51/60 (85%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDEANYVVLRD 182
TEEEIRAVLL+ +TTQ LVA+F RLK KE+K+AF AILRRIS+I+K++ AN+VVLR+
Sbjct: 473 TEEEIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVVLRE 532
>gb|EYU27711.1| hypothetical protein MIMGU_mgv1a004300mg [Mimulus guttatus]
Length = 392
Score = 82.8 bits (203), Expect = 4e-14
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 13/126 (10%)
Frame = +3
Query: 87 KSKEEKNAFTAILRRISKIRKSDEANYVV-LRDNNAITSRDLVSSSTKAPADPS------ 245
KSK + N + + ++K+ N V ++D +S+ + P PS
Sbjct: 266 KSKRKSNGEESKTTNGAPLKKAKTENEVKSVKDEIGSSSKSSAPTKGATPPAPSVSASAP 325
Query: 246 -TGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAAILSRISKVQK-----F 407
TG VTEEEIR+VLL+ P+ TQ LVA+F+ RLK KEDK+AFAAIL RIS++QK F
Sbjct: 326 PTGPVTEEEIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANF 385
Query: 408 VVLRDK 425
VVLR++
Sbjct: 386 VVLRER 391
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/60 (66%), Positives = 51/60 (85%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDEANYVVLRD 182
TEEEIRAVLL+ +TTQ LVA+F RLK KE+K+AF AILRRIS+I+K++ AN+VVLR+
Sbjct: 331 TEEEIRAVLLQKMPVTTQDLVAKFKSRLKLKEDKDAFAAILRRISRIQKTNGANFVVLRE 390
>ref|XP_002529600.1| tfiif-alpha, putative [Ricinus communis]
gi|223530933|gb|EEF32792.1| tfiif-alpha, putative
[Ricinus communis]
Length = 584
Score = 80.9 bits (198), Expect = 2e-13
Identities = 47/108 (43%), Positives = 71/108 (65%), Gaps = 12/108 (11%)
Frame = +3
Query: 138 KIRKSDEANYVVLRDNNAITSRDLVSSSTKAPA-------DPSTGRVTEEEIRSVLLKSA 296
K++ +E+ ++V ++ N TS+ S++ K A STG VT+EEI++VLL++
Sbjct: 478 KVKTENESKHIV-KEENVPTSKSKSSANPKGAAASLRTESTSSTGFVTDEEIKAVLLQNG 536
Query: 297 PLATQALVAEFRERLKSKEDKNAFAAILSRISKVQK-----FVVLRDK 425
P+ TQ LVA+F+ RLK++EDK AF L RIS++QK +VVLRDK
Sbjct: 537 PVTTQDLVAKFKSRLKTREDKEAFTHTLKRISRIQKTSGGSYVVLRDK 584
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/60 (58%), Positives = 49/60 (81%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDEANYVVLRD 182
T+EEI+AVLL++ +TTQ LVA+F RLK++E+K AFT L+RIS+I+K+ +YVVLRD
Sbjct: 524 TDEEIKAVLLQNGPVTTQDLVAKFKSRLKTREDKEAFTHTLKRISRIQKTSGGSYVVLRD 583
>ref|XP_006352367.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X4 [Solanum tuberosum]
Length = 535
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 6/77 (7%)
Frame = +3
Query: 213 SSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAAILSRIS 392
SSS+K P+TG VTE+EIR+VLL+ P+ TQ LV++F+ RLK KEDK AFA +L +IS
Sbjct: 459 SSSSKTAPSPATGPVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKIS 518
Query: 393 KVQK------FVVLRDK 425
K+QK +VVLR++
Sbjct: 519 KIQKTTTGSSYVVLRER 535
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/61 (57%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDE-ANYVVLR 179
TE+EIRAVLL+ +TTQ LV++F RLK KE+K AF +LR+ISKI+K+ ++YVVLR
Sbjct: 474 TEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLR 533
Query: 180 D 182
+
Sbjct: 534 E 534
>ref|XP_006352364.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
isoform X1 [Solanum tuberosum]
gi|565371548|ref|XP_006352365.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X2 [Solanum tuberosum]
gi|565371550|ref|XP_006352366.1| PREDICTED:
transcription initiation factor IIF subunit alpha-like
isoform X3 [Solanum tuberosum]
Length = 538
Score = 80.1 bits (196), Expect = 3e-13
Identities = 42/77 (54%), Positives = 57/77 (74%), Gaps = 6/77 (7%)
Frame = +3
Query: 213 SSSTKAPADPSTGRVTEEEIRSVLLKSAPLATQALVAEFRERLKSKEDKNAFAAILSRIS 392
SSS+K P+TG VTE+EIR+VLL+ P+ TQ LV++F+ RLK KEDK AFA +L +IS
Sbjct: 459 SSSSKTAPSPATGPVTEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKIS 518
Query: 393 KVQK------FVVLRDK 425
K+QK +VVLR++
Sbjct: 519 KIQKTTTGSSYVVLRER 535
Score = 64.7 bits (156), Expect = 1e-08
Identities = 35/61 (57%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = +3
Query: 3 TEEEIRAVLLESALLTTQALVAEFWERLKSKEEKNAFTAILRRISKIRKSDE-ANYVVLR 179
TE+EIRAVLL+ +TTQ LV++F RLK KE+K AF +LR+ISKI+K+ ++YVVLR
Sbjct: 474 TEDEIRAVLLQRKPVTTQDLVSQFKSRLKCKEDKAAFAEVLRKISKIQKTTTGSSYVVLR 533
Query: 180 D 182
+
Sbjct: 534 E 534