BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00010704
         (1488 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chlorop...   248   7e-84
ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chlorop...   262   3e-67
ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, par...   262   3e-67
ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chlorop...   260   1e-66
ref|XP_007203785.1| hypothetical protein PRUPE_ppa001872mg [Prun...   259   3e-66
gb|EYU30728.1| hypothetical protein MIMGU_mgv1a003873mg [Mimulus...   256   2e-65
ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [A...   253   1e-64
ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arab...   252   3e-64
ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chlorop...   250   1e-63
ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutr...   249   2e-63
ref|XP_007013075.1| RNA-binding CRS1 / YhbY domain-containing pr...   248   5e-63
ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]...   246   2e-62
ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Popu...   245   4e-62
ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]...   245   4e-62
ref|XP_002535109.1| conserved hypothetical protein [Ricinus comm...   245   4e-62
gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]             244   6e-62
ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chlorop...   244   6e-62
emb|CBI28022.3| unnamed protein product [Vitis vinifera]              243   2e-61
ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chlorop...   243   2e-61
ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Caps...   243   2e-61

>ref|XP_004239268.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
           lycopersicum]
          Length = 766

 Score =  248 bits (634), Expect(2) = 7e-84
 Identities = 121/190 (63%), Positives = 146/190 (76%), Gaps = 4/190 (2%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NVCE+LE+KTGGKIIY            NYNY +RPR+PLMLW+PV+PVYPRL++
Sbjct: 305 TVDMDNVCEKLEEKTGGKIIYHKGGVIYLFRGRNYNYMTRPRFPLMLWRPVTPVYPRLVR 364

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           + PEGLTLEEATEMRK GR L PICKL KNGVY DL  +VREAFE CELV INC+G+NPS
Sbjct: 365 RVPEGLTLEEATEMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEACELVCINCQGLNPS 424

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSS-PTISDS---ESEEEIVNGSSCSG 530
           DY+KIG KLKDLVPCVL+SFE+EHIL+WRGR+W SS P   D+       E VN ++ + 
Sbjct: 425 DYRKIGAKLKDLVPCVLISFEQEHILIWRGRDWVSSLPEDGDNPEIREGSESVNAANTNR 484

Query: 531 SLAVEDEAAS 560
           S  V+  A++
Sbjct: 485 SFEVQVVAST 494



 Score = 91.3 bits (225), Expect(2) = 7e-84
 Identities = 71/244 (29%), Positives = 122/244 (50%), Gaps = 16/244 (6%)
 Frame = +2

Query: 626  YKVEEGAKSEGKEVVFNSLASDVQSEATDFSLTKIEILPAV----SENVGSICDSKPMVS 793
            Y  ++G K +  E  +   ++ V    T  S ++I ++ A     +  + S C      S
Sbjct: 524  YVRKDGTKEDRSEDHYPESSNKVSVTTTGISKSEIPLVYAGDTGDNSRILSDCRECKTRS 583

Query: 794  ENTRQGSETE----SPPLTHLNGTSAMVTNENLEVASKGLSSLNEC---AKSTLCTEGVV 952
            +++    E+E    S  + +   +S++V     +V S  + +   C   +  T CTEG++
Sbjct: 584  DDSVVDKESEFESASDDVENKFDSSSLVPLTGYKVHSLTVDTNQNCQLVSSITPCTEGIL 643

Query: 953  QLLRQAMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSEQK-- 1126
             L +QA+ESGSAV L+D+S+DADIV+ R V+LS   P GP+F             E++  
Sbjct: 644  LLWKQAIESGSAVVLNDSSIDADIVYQRAVALSTSVPPGPVFQHQPKKVSVQRRGEEEIG 703

Query: 1127 EVRSNC---DEELKVEATATFPGKRIERKTYHRNPRIKDVKEVYLDMLPPQGSLGVDELA 1297
            ++   C   D             +++   T  R  + K +++ YL+++ P+GSLGVDELA
Sbjct: 704  DLEVGCTKLDTPASSRKETVVSSRKVNSTTSTRKEKKKGIRKDYLNVV-PKGSLGVDELA 762

Query: 1298 KLLS 1309
            KLL+
Sbjct: 763  KLLA 766


>ref|XP_006494323.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Citrus
           sinensis]
          Length = 837

 Score =  262 bits (670), Expect = 3e-67
 Identities = 126/185 (68%), Positives = 148/185 (80%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NVCEQLE++TGGKIIY            NYNY++RP +PLMLWKP++PVYPRLI+
Sbjct: 311 TVDMDNVCEQLEERTGGKIIYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQ 370

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           Q P+GLTLEEATEMRK GR+L PICKLGKNGVY DLA +VREAFEVCELVRINC+GMN S
Sbjct: 371 QVPDGLTLEEATEMRKKGRKLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGS 430

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSSPTISDSESEEEIVNGSSCSGSLAV 542
           DY+KIG KL+DLVPCVL+SFEREHILMWRG+EWKSS     ++SE+     S   GS++V
Sbjct: 431 DYRKIGAKLRDLVPCVLISFEREHILMWRGQEWKSSILKPGNDSED--AKESKVDGSISV 488

Query: 543 EDEAA 557
               A
Sbjct: 489 APPTA 493



 Score = 73.2 bits (178), Expect = 3e-10
 Identities = 49/124 (39%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
 Frame = +2

Query: 941  EGVVQLLRQAMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSE 1120
            E V+ L+RQA+E+GSAV LDDA+LDAD ++ R+V+ +K AP GP+F             E
Sbjct: 716  EIVLHLMRQAVENGSAVVLDDATLDADSIYERSVAFAKSAPPGPVF-QQRSRKIAIQKGE 774

Query: 1121 QKEVRSNCDEELKVEATATFPGKRIERKTYHRNPRIKDVKEVYLD-MLPPQGSLGVDELA 1297
            +KE   +   + +V        +   R++  +  +  D  E  LD +L PQGSL +DELA
Sbjct: 775  KKEA-GHLKMKREVPNMVVSENRGNVRQSNRKKTKNSDEIEHGLDVVLSPQGSLKIDELA 833

Query: 1298 KLLS 1309
            KLL+
Sbjct: 834  KLLA 837


>ref|XP_006451251.1| hypothetical protein CICLE_v100106541mg, partial [Citrus
           clementina] gi|557554477|gb|ESR64491.1| hypothetical
           protein CICLE_v100106541mg, partial [Citrus clementina]
          Length = 825

 Score =  262 bits (670), Expect = 3e-67
 Identities = 126/185 (68%), Positives = 148/185 (80%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NVCEQLE++TGGKIIY            NYNY++RP +PLMLWKP++PVYPRLI+
Sbjct: 317 TVDMDNVCEQLEERTGGKIIYRRGGVLYLFRGRNYNYRNRPHFPLMLWKPITPVYPRLIQ 376

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           Q P+GLTLEEATEMRK GR+L PICKLGKNGVY DLA +VREAFEVCELVRINC+GMN S
Sbjct: 377 QVPDGLTLEEATEMRKKGRKLIPICKLGKNGVYCDLAKNVREAFEVCELVRINCQGMNGS 436

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSSPTISDSESEEEIVNGSSCSGSLAV 542
           DY+KIG KL+DLVPCVL+SFEREHILMWRG+EWKSS     ++SE+     S   GS++V
Sbjct: 437 DYRKIGAKLRDLVPCVLISFEREHILMWRGQEWKSSILKPGNDSED--AKESKVDGSISV 494

Query: 543 EDEAA 557
               A
Sbjct: 495 APPTA 499



 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 27/46 (58%), Positives = 38/46 (82%)
 Frame = +2

Query: 941  EGVVQLLRQAMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIF 1078
            E V+ L+RQA+E+GSAV LDDA+LDAD ++ R+V+ +K AP GP+F
Sbjct: 722  EIVLHLMRQAVENGSAVVLDDATLDADSIYERSVAFAKSAPPGPVF 767


>ref|XP_004287455.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 804

 Score =  260 bits (665), Expect = 1e-66
 Identities = 134/218 (61%), Positives = 163/218 (74%), Gaps = 3/218 (1%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDMENVC+QLE++TGGKIIY            NYNYK+RPR+PLMLW+P++PVYPRLI+
Sbjct: 310 TVDMENVCQQLEERTGGKIIYRRGGVIFLFRGRNYNYKTRPRFPLMLWRPITPVYPRLIQ 369

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           + PEGLT+EEATEMRK GR L PI KLGKNGVYSDL D+VREAFE CELVRI+C+GMN S
Sbjct: 370 RAPEGLTVEEATEMRKKGRDLIPIRKLGKNGVYSDLVDNVREAFEECELVRIDCQGMNGS 429

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSS---PTISDSESEEEIVNGSSCSGS 533
           DY+KIG KLKDLVPCVL+SFERE ILMWRGREWKSS   P  +  E +E  V+ S  S +
Sbjct: 430 DYRKIGAKLKDLVPCVLISFERESILMWRGREWKSSLVNPESNLKEVKESNVDDSP-SIA 488

Query: 534 LAVEDEAASELFEGKSSNNDMNIDVIKPNLPIKLRRVL 647
           L++E E AS +     S  D N ++I  ++   +  V+
Sbjct: 489 LSLEGEDASTVCAFTGSVKDANPEMIDTSISSSIAEVV 526



 Score = 89.0 bits (219), Expect = 5e-15
 Identities = 80/216 (37%), Positives = 107/216 (49%), Gaps = 29/216 (13%)
 Frame = +2

Query: 749  SENVGSICDSKPMVSENTRQGSETESPPLTHLNGTSAMVTNENLEV-------------- 886
            SE + S   ++ ++ +NTR   E    P T +   + +VT EN E               
Sbjct: 595  SETISSTSGTEDIL-DNTRHADEAS--PTTSVGTGAILVTVENTETKLNTLMESPGSNKT 651

Query: 887  ---ASKGLSSLNECAK-STLCTEGVVQLLRQAMESGSAVTLDDASLDADIVFNRTVSLSK 1054
               AS    +LNE AK    C E V+ LL +A+ SGSA+ LDD+SLDADI++ R V L+K
Sbjct: 652  PQDASVASQNLNERAKLCAACKEKVLSLLNEAVGSGSALILDDSSLDADIIYQRAVDLAK 711

Query: 1055 VAPLGPIFXXXXXXXXXXXXSEQKEVRSNCDE--ELKVEATATF-------PGKRIERK- 1204
             AP GP+F             ++  VR    E  EL+V+    +         KR ERK 
Sbjct: 712  SAPPGPVF-KHRSSRGSAQMRKKLVVRKQKQEATELEVKEITVYDMQRNLGEKKRSERKD 770

Query: 1205 -TYHRNPRIKDVKEVYLDMLPPQGSLGVDELAKLLS 1309
               HR  R +D  E  LD + PQGSL VDELAKLL+
Sbjct: 771  SKVHRT-RTRDFGEP-LDSIVPQGSLRVDELAKLLA 804


>ref|XP_007203785.1| hypothetical protein PRUPE_ppa001872mg [Prunus persica]
           gi|462399316|gb|EMJ04984.1| hypothetical protein
           PRUPE_ppa001872mg [Prunus persica]
          Length = 750

 Score =  259 bits (661), Expect = 3e-66
 Identities = 127/212 (59%), Positives = 156/212 (73%), Gaps = 4/212 (1%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NVCEQ+E+KTGGKIIY            NYNYK+RP++PLMLW+P++PVYPRL++
Sbjct: 310 TVDMDNVCEQIEEKTGGKIIYRKGGVIYLFRGRNYNYKTRPQFPLMLWRPITPVYPRLVQ 369

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           + PEGLTLEEATEMRK GR L PICKLGKNGVYS+LA + REAFE CELVRINC GMN S
Sbjct: 370 RAPEGLTLEEATEMRKKGRNLIPICKLGKNGVYSELAKNAREAFEECELVRINCTGMNGS 429

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSSPTISDSESEEEIVNGSSCSGSLAV 542
           DY+KIG KLKDLVPCVL+SFE EHILMWRGREWKSS    +++ +E  V GS    S ++
Sbjct: 430 DYRKIGAKLKDLVPCVLISFELEHILMWRGREWKSSIPYPENDLKE--VKGSDVDDSTSI 487

Query: 543 ----EDEAASELFEGKSSNNDMNIDVIKPNLP 626
               E +  S       S  D +++++  + P
Sbjct: 488 APPLEGQEESTSCASTVSVKDASLEILNTSTP 519



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 66/178 (37%), Positives = 98/178 (55%), Gaps = 4/178 (2%)
 Frame = +2

Query: 788  VSENTRQGSETESPPLTHLNGTSAMVTNENLEVASKGLSSLNECAKST-LCTEGVVQLLR 964
            + +NT   ++  SP       T    +NEN + AS    +L+E A+S+  C E V+ LL 
Sbjct: 581  ILDNTGCAADEASPTTV----TGGPRSNENPQCASVSSENLSEPARSSGPCMENVLLLLN 636

Query: 965  QAMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSEQKEVRSNC 1144
            +A+ SGSA+ LDD++LDADI+F R V+L++ AP GP+F            + QK ++   
Sbjct: 637  EAVGSGSALILDDSALDADIIFQRAVALAQSAPPGPVF----KHHRPKKVAVQKRIKIMK 692

Query: 1145 DEELKVEA-TATFPGKRIERKTYHRNPRIKDVKEV--YLDMLPPQGSLGVDELAKLLS 1309
             E    E    T P KR   K   ++ ++K  ++    LD + PQGSL VDELAKLL+
Sbjct: 693  QEASVSEVKEITVPVKRGSEKIQMKDTKVKRTRDFGESLDNVVPQGSLRVDELAKLLA 750


>gb|EYU30728.1| hypothetical protein MIMGU_mgv1a003873mg [Mimulus guttatus]
          Length = 558

 Score =  256 bits (653), Expect = 2e-65
 Identities = 126/203 (62%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDMENVC+QLEDKTGGKIIY            NYNYKSRPR+PLMLWKP+SPVYPRL++
Sbjct: 151 TVDMENVCQQLEDKTGGKIIYNRGGVIYLFRGRNYNYKSRPRFPLMLWKPISPVYPRLVR 210

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           + PEGLTLEEA+ MRK GR L PICKL KNGVYSDL ++VREAFE CELVRINC+G+NPS
Sbjct: 211 RVPEGLTLEEASAMRKKGRDLTPICKLAKNGVYSDLVENVREAFEACELVRINCQGLNPS 270

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSSPTISDSESEEEIVNGSSCSGSLAV 542
           D+KKIG KLK LVPCVL+SFE EHIL+WRGR+WKS+  ++               GS  V
Sbjct: 271 DHKKIGAKLKALVPCVLISFEYEHILVWRGRDWKSTLDLN-----------GGLKGSKKV 319

Query: 543 ED-EAASELFEGKSSNNDMNIDV 608
           E     + L   ++++ND+  DV
Sbjct: 320 EPAPGVTSLLVTEATSNDVEDDV 342



 Score = 75.5 bits (184), Expect = 6e-11
 Identities = 57/179 (31%), Positives = 93/179 (51%), Gaps = 12/179 (6%)
 Frame = +2

Query: 806  QGSETESPPLTHLNGTSAMVTNENLEVASKGL--SSLNECAKSTLCTEGVVQLLRQAMES 979
            +  +T    LT L G     ++  +E   + L  S      K+T  T+ ++ L +QA+E+
Sbjct: 380  KSDQTVENDLTVLEGLVESQSDPTVENDLQNLAASQTRPEKKNTESTQAILLLRKQAVEN 439

Query: 980  GSAVTLDDAS--LDADIVFNRTVSLSKVAPLGPIF-XXXXXXXXXXXXSEQKEVRSNCDE 1150
            G A+  D+ S  LD+D VF   V+ +K AP+GP+F             S++K  +     
Sbjct: 440  GMALVFDEHSVLLDSDAVFKTAVAFAKTAPVGPVFSKRPKKAVEEVEKSKKKNNKGRECN 499

Query: 1151 ELKVEATATFPGKRI-------ERKTYHRNPRIKDVKEVYLDMLPPQGSLGVDELAKLL 1306
            +L +   A+  G  I       ERK   RN ++KD++  YL+++ PQG+LG+DELA+LL
Sbjct: 500  DLVLSKGASALGTGIYVSKGMDERKNSSRNEKLKDIRGDYLNVV-PQGNLGIDELARLL 557


>ref|XP_006853609.1| hypothetical protein AMTR_s00056p00043140 [Amborella trichopoda]
            gi|548857270|gb|ERN15076.1| hypothetical protein
            AMTR_s00056p00043140 [Amborella trichopoda]
          Length = 977

 Score =  253 bits (647), Expect = 1e-64
 Identities = 129/219 (58%), Positives = 159/219 (72%), Gaps = 13/219 (5%)
 Frame = +3

Query: 3    TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
            TVDM+NVCEQLE+KTGGKIIY            NYNY+ RPR+PLMLW+P++PVYPRLI 
Sbjct: 462  TVDMDNVCEQLEEKTGGKIIYRRGGVLYLFRGRNYNYRLRPRFPLMLWRPITPVYPRLIP 521

Query: 183  QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
              PEGLTLEEA EMRK GR++ PICKL KNGVY DL  +V+EAFE CELVRINC+G+N S
Sbjct: 522  LVPEGLTLEEAKEMRKKGRKVPPICKLAKNGVYVDLVKNVKEAFEECELVRINCQGLNAS 581

Query: 363  DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSSPTISDSESEE-EIVNGSSCSGS-- 533
            DYKKIG KLKD+VPCVL+SFE EHILMWRGR+W SSP+  +++SE  EI   SS +G+  
Sbjct: 582  DYKKIGAKLKDIVPCVLISFENEHILMWRGRDWTSSPSKLENDSETLEIAEVSSETGAPD 641

Query: 534  -----LAVEDEAASELFEGKSSN-----NDMNIDVIKPN 620
                 ++  D ++S L   K S      N ++ + I+PN
Sbjct: 642  PQILPISNPDTSSSALDTEKCSTTSSQPNQVDSNCIEPN 680



 Score = 62.0 bits (149), Expect = 7e-07
 Identities = 61/236 (25%), Positives = 109/236 (46%), Gaps = 8/236 (3%)
 Frame = +2

Query: 623  SYKVEEGAKSEGKEVVFNSLASDVQSEATDFSLTKIEILP-AVSENVGSICDSKPMVSEN 799
            S  V E ++SE +  +  S +  + S     S++++ + P  +   +    +     ++ 
Sbjct: 743  SQPVLEDSRSEVEVKLNGSESETLASFEGSRSISELSVTPKGLGSKMVVSMEGSESKTQL 802

Query: 800  TRQGSETESPPLTHLNGTSAMVTNENLEVASKGLSSLNECAKSTLCTEGVVQLLRQAMES 979
             ++GS+     + + +G++   T   L  A   +S  +E  K  +   GV++L  +A+  
Sbjct: 803  DQEGSKGNLMVVLNASGSNDSGTVLKLREAPGTVSEDSE-RKGRMAVLGVLRLRERAVVE 861

Query: 980  GSAVTLDDAS-LDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSEQKEVRSNCDEEL 1156
            G AV LD+ S +DA+IV++R V L+  AP  P+F            ++ KE  S      
Sbjct: 862  GMAVVLDEKSYIDANIVYDRAVKLALTAPKDPVFVHNRHNKREVLVNKGKERGSELRGRE 921

Query: 1157 KVEATATFPGKRIERKTYHRNPR------IKDVKEVYLDMLPPQGSLGVDELAKLL 1306
             V        +  ERK    + R      ++  +EV+ D + P G+L VDELAKLL
Sbjct: 922  NVGVVQVKAKESSERKVKEGSERKKSSVKVQKRREVHFDAI-PHGNLAVDELAKLL 976


>ref|XP_002886005.1| hypothetical protein ARALYDRAFT_480467 [Arabidopsis lyrata subsp.
           lyrata] gi|297331845|gb|EFH62264.1| hypothetical protein
           ARALYDRAFT_480467 [Arabidopsis lyrata subsp. lyrata]
          Length = 700

 Score =  252 bits (643), Expect = 3e-64
 Identities = 119/185 (64%), Positives = 146/185 (78%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+ VCEQLE+K GGK+IY            NYN+++RPR+PLMLWKPV+PVYPRLI+
Sbjct: 296 TVDMDKVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQ 355

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           Q PEGLTL+EATEMR+ GR+L PICKLGKNGVY DL  +V+EAFEVCELVRI+C+GM  S
Sbjct: 356 QVPEGLTLQEATEMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGS 415

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSSPTISDSESEEEIVNGSSCSGSLAV 542
           D++KIG KLKDLVPCVL+SFE E IL+WRGREWKSS TI D   +++I+       +L  
Sbjct: 416 DFRKIGAKLKDLVPCVLISFENEQILIWRGREWKSSLTIPD--KKDDILEDIEVDAALPE 473

Query: 543 EDEAA 557
           +DEA+
Sbjct: 474 DDEAS 478



 Score = 62.4 bits (150), Expect = 5e-07
 Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 18/181 (9%)
 Frame = +2

Query: 821  ESPPLTHLNGTSAMVTNENLEVASKGLSSLNECAKSTLCTEGVVQLLRQAMESGSAVTLD 1000
            +SP    L   +A  + ++ E       +  E +K ++  E V+ L++QA+ESG+A+ LD
Sbjct: 525  QSPSTKDLTEPTADSSIQDHEEPEHEPETSEEISKQSI--ERVLNLMKQAVESGTALVLD 582

Query: 1001 DASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSEQKE--------------VRS 1138
             A LDAD VF++ V+ S VA  GP+F             E +E              V  
Sbjct: 583  AADLDADTVFSKAVTFSTVASPGPVFQHGLRKQPTVKKQESREFGYRNLEAKSSNVVVSR 642

Query: 1139 NCDEELKV----EATATFPGKRIERKTYHRNPRIKDVKEVYLDMLPPQGSLGVDELAKLL 1306
            N  +   V    +      G+R E++   +  ++ +  E Y +++ P G+L +DELAKLL
Sbjct: 643  NASKSSNVVVSGKREVAVSGEREEKEGLKK--KMDEFAEDYREVI-PHGTLKLDELAKLL 699

Query: 1307 S 1309
            +
Sbjct: 700  A 700


>ref|XP_006338151.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Solanum
           tuberosum]
          Length = 764

 Score =  250 bits (638), Expect = 1e-63
 Identities = 117/167 (70%), Positives = 138/167 (82%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NVCE+LE+KTGGKIIY            NYNYK+RPR+PLMLW+PV+PVYPRL++
Sbjct: 305 TVDMDNVCEKLEEKTGGKIIYHKGGLIYLFRGRNYNYKTRPRFPLMLWRPVTPVYPRLVQ 364

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           + PEGLTLEEAT MRK GR L PICKL KNGVY DL  +VREAFE CELV INC+G+NPS
Sbjct: 365 RVPEGLTLEEATLMRKKGRNLIPICKLAKNGVYCDLVKNVREAFEACELVSINCQGLNPS 424

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSS-PTISDSESEE 500
           DY+KIG KLKDLVPCVL+SFE+EHILMWRGR+W SS P   D++S++
Sbjct: 425 DYRKIGAKLKDLVPCVLISFEQEHILMWRGRDWVSSLPEDRDNDSDK 471



 Score = 99.4 bits (246), Expect = 4e-18
 Identities = 63/179 (35%), Positives = 99/179 (55%), Gaps = 8/179 (4%)
 Frame = +2

Query: 797  NTRQGSETESPPLTHLNGTSAMVTNENLEVASKGLSSLNEC---AKSTLCTEGVVQLLRQ 967
            +T    E+ S  + +   +S++V     +V S  + +   C   +  T CTEG++ L +Q
Sbjct: 587  DTENELESASDDVENKFDSSSLVPLTGYKVHSLTVDTNQNCQLVSSITPCTEGILLLWKQ 646

Query: 968  AMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSEQK--EVRSN 1141
            A+ESGSAV LDD+S+DADIV+ R V+LS  AP GP+F             E++  ++   
Sbjct: 647  AIESGSAVLLDDSSIDADIVYQRAVALSTSAPAGPVFQHQPKKVSVQRRGEEEIGDLEVG 706

Query: 1142 C---DEELKVEATATFPGKRIERKTYHRNPRIKDVKEVYLDMLPPQGSLGVDELAKLLS 1309
            C   D            G+++   T  R  ++K ++E YL+++ P+GSLGVDELAKLL+
Sbjct: 707  CTKLDTPASSRKETAVSGRKVNSTTSTRKEKLKGIREDYLNVV-PKGSLGVDELAKLLA 764


>ref|XP_006408916.1| hypothetical protein EUTSA_v10001924mg [Eutrema salsugineum]
           gi|557110072|gb|ESQ50369.1| hypothetical protein
           EUTSA_v10001924mg [Eutrema salsugineum]
          Length = 678

 Score =  249 bits (636), Expect = 2e-63
 Identities = 123/218 (56%), Positives = 155/218 (71%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NVCEQLE+K GGK+IY            NYN+++RPR+PLMLWKPV+PVYPRLI+
Sbjct: 296 TVDMDNVCEQLEEKIGGKVIYRRGGVIFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQ 355

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           Q PEGLT +EATEMR+ GR+L PICKLGKNGVY DL  +V+EAFEVCELVRI+C+GM  S
Sbjct: 356 QVPEGLTRQEATEMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGS 415

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSSPTISDSESEEEIVNGSSCSGSLAV 542
           D++KIG KLKDLVPCVL+SFE E IL+WRGREWKSS T  D + +          G + V
Sbjct: 416 DFRKIGAKLKDLVPCVLISFENEQILIWRGREWKSSLTTPDKKDD--------ILGDIEV 467

Query: 543 EDEAASELFEGKSSNNDMNIDVIKPNLPIKLRRVLNQK 656
            D A  E  + ++S +     V+  N P+  + + N +
Sbjct: 468 -DTALPEGDDDEASESPNQTQVVTQNSPLGSKELQNDQ 504



 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
 Frame = +2

Query: 926  STLCTEGVVQLLRQAMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXX 1105
            +T   E V+ L++QA+ESG+A+ L+   LDAD VF ++V+ S VA  GP+F         
Sbjct: 544  NTQSIERVLNLMKQAVESGNAIVLEATDLDADTVFAKSVAFSSVATPGPVFQHGLRKEPM 603

Query: 1106 XXXSEQKEVRSNCDEELKV-------EATATFPGKRIERKTYH-RNPRIKDVKEVYLDML 1261
                E        + E K        E       +R E+K       ++++  E Y +++
Sbjct: 604  VKKQENHREFGYQNLEAKTSNVVFSREKEVAVGVERDEKKEKEGLKKKLEEFDEDYREVI 663

Query: 1262 PPQGSLGVDELAKLLS 1309
             P G+L VDELAKLL+
Sbjct: 664  -PHGTLKVDELAKLLA 678


>ref|XP_007013075.1| RNA-binding CRS1 / YhbY domain-containing protein, putative
           [Theobroma cacao] gi|508783438|gb|EOY30694.1|
           RNA-binding CRS1 / YhbY domain-containing protein,
           putative [Theobroma cacao]
          Length = 767

 Score =  248 bits (633), Expect = 5e-63
 Identities = 117/181 (64%), Positives = 139/181 (76%), Gaps = 3/181 (1%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NVCEQLE++TGGK+IY            NYNYK+RPR+PLMLWKPV+P+YPRLI+
Sbjct: 303 TVDMDNVCEQLEERTGGKVIYRRGGVLFLFRGRNYNYKTRPRFPLMLWKPVTPMYPRLIQ 362

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           + PEGLT+EE +EMRK GR+L PICKL KNGVYSDL  +VREAFE CELVR+NCEG+  S
Sbjct: 363 KAPEGLTVEEMSEMRKKGRKLMPICKLAKNGVYSDLVKNVREAFEECELVRVNCEGIKGS 422

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSS---PTISDSESEEEIVNGSSCSGS 533
           DY+KIG KLK+LVPCVL+SFE E ILMWRGR WKSS   P  +    E +  N +S  G 
Sbjct: 423 DYRKIGAKLKELVPCVLISFENESILMWRGRNWKSSFLKPAFNSGVEERDAENATSILGQ 482

Query: 534 L 536
           L
Sbjct: 483 L 483



 Score =  100 bits (249), Expect = 2e-18
 Identities = 69/180 (38%), Positives = 99/180 (55%), Gaps = 1/180 (0%)
 Frame = +2

Query: 773  DSKPMVSENTRQGSETESPPLTHLNGTSAMVTNENLEVASKGLSSLNECAKSTL-CTEGV 949
            D  P  SENT   S++ES  +  LN        + LE  ++    +N  A+ T  CTE V
Sbjct: 604  DVMPRSSENTL--SQSESSVMDSLN-------LDQLEDVAQASQDINGPARKTAPCTERV 654

Query: 950  VQLLRQAMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSEQKE 1129
            +  ++QA+ESGSAV LDDA+LDADI++ R V+ ++ AP GP+F             +Q+ 
Sbjct: 655  LLFMKQAVESGSAVVLDDATLDADIIYERAVAFARSAPPGPVFRHQPRKVAVQKNGKQEP 714

Query: 1130 VRSNCDEELKVEATATFPGKRIERKTYHRNPRIKDVKEVYLDMLPPQGSLGVDELAKLLS 1309
                    L+V+     P K    K   +  RIK + E +LD++ P+GSLGVDELAKLL+
Sbjct: 715  A------NLEVKELKAVPNKGGNEKQASKTQRIKYIDERHLDIV-PRGSLGVDELAKLLA 767


>ref|XP_003630745.1| CRS2-associated factor [Medicago truncatula]
           gi|355524767|gb|AET05221.1| CRS2-associated factor
           [Medicago truncatula]
          Length = 698

 Score =  246 bits (627), Expect = 2e-62
 Identities = 112/156 (71%), Positives = 131/156 (83%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NVC+QLE+KTGGK+IY            NYN+K+RPR+PLMLWKPV PVYPRLI+
Sbjct: 225 TVDMDNVCQQLEEKTGGKVIYRRGGVIYLFRGRNYNHKTRPRFPLMLWKPVPPVYPRLIQ 284

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           Q PEGLTLEEATEMR+ GR L PICKLGKNGVY +L ++VREAFE CELVR+NC+G+N S
Sbjct: 285 QVPEGLTLEEATEMRQKGRTLTPICKLGKNGVYYNLVNNVREAFEECELVRVNCQGLNKS 344

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSS 470
           DY+KIG KL+DLVPC L+S+E EHILMWRGR WKSS
Sbjct: 345 DYRKIGAKLRDLVPCTLLSYENEHILMWRGRNWKSS 380



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
 Frame = +2

Query: 941  EGVVQLLRQAMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSE 1120
            +G+  LL QA+E G+A+ LD  SLDAD V+  TVS ++ AP GP+F             +
Sbjct: 578  KGISLLLEQAVEQGNALVLDKDSLDADNVYRTTVSFAQSAPPGPVFMKHRKVAV-----Q 632

Query: 1121 QKEVRSNCDEELKVEATATFPGKRIERK-TYHRNPRIK---DVKEVYLDMLPPQGSLGVD 1288
            + + +     E +   T T  G  +  K    R+PRI+   +  E +++++ PQG+LGVD
Sbjct: 633  KSDKQEALTPETRETTTVTTKGTTVATKGKRERSPRIRRKENFDERFMNLV-PQGTLGVD 691

Query: 1289 ELAKLLS 1309
            ELAKLL+
Sbjct: 692  ELAKLLT 698


>ref|XP_006389456.1| hypothetical protein POPTR_0024s00430g [Populus trichocarpa]
           gi|550312256|gb|ERP48370.1| hypothetical protein
           POPTR_0024s00430g [Populus trichocarpa]
          Length = 731

 Score =  245 bits (625), Expect = 4e-62
 Identities = 121/191 (63%), Positives = 146/191 (76%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NVC+QLE++TGGKIIY            NYNY+ RPR+PLMLWKPV+PVYPRLI+
Sbjct: 301 TVDMDNVCQQLEERTGGKIIYRKGGVLYLFRGRNYNYRFRPRFPLMLWKPVTPVYPRLIQ 360

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           + PEGLTL+EA+ MR  GR+L PICKLGKNGVY DL  +VREAFE CELVRINC+GMN S
Sbjct: 361 RAPEGLTLQEASGMRNKGRKLIPICKLGKNGVYRDLVRNVREAFEECELVRINCQGMNGS 420

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSSPTISDSESEEEIVNGSSCSGSLAV 542
           D++KIG KL+DLVPCVL+SFE EHILMWRGR+WKSS T   ++ +E     SS  G+   
Sbjct: 421 DFRKIGAKLRDLVPCVLISFECEHILMWRGRDWKSSFTKPVNDGDE--AKNSSIDGA--- 475

Query: 543 EDEAASELFEG 575
              +A+ L EG
Sbjct: 476 --TSATPLLEG 484



 Score = 79.7 bits (195), Expect = 3e-12
 Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 1/147 (0%)
 Frame = +2

Query: 872  ENLEVASKGLSSLNECAK-STLCTEGVVQLLRQAMESGSAVTLDDASLDADIVFNRTVSL 1048
            E L+  S+G S ++E AK +   T+GV++LL+QA+E GSAV LD A+LDAD V+ + V+ 
Sbjct: 594  EKLQNVSEG-SHVSELAKLNESYTQGVLELLKQAVEIGSAVVLD-ANLDADAVYQKAVAF 651

Query: 1049 SKVAPLGPIFXXXXXXXXXXXXSEQKEVRSNCDEELKVEATATFPGKRIERKTYHRNPRI 1228
            ++ AP GP+F             ++ E++ N + E+K   + +  G   ERK+     R 
Sbjct: 652  AQSAPPGPVFRRQPRNTVV----QKSEMQENGELEVKQVTSFSKMGGGSERKS--SKVRR 705

Query: 1229 KDVKEVYLDMLPPQGSLGVDELAKLLS 1309
            K   E Y+D + PQGSL VDELAKLL+
Sbjct: 706  KYFNEQYVDSV-PQGSLRVDELAKLLA 731


>ref|NP_565462.1| CRS2-associated factor 1 [Arabidopsis thaliana]
           gi|75266026|sp|Q9SL79.2|CAF1P_ARATH RecName:
           Full=CRS2-associated factor 1, chloroplastic; AltName:
           Full=Chloroplastic group IIA intron splicing facilitator
           CRS2-associated factor 1; Flags: Precursor
           gi|15028051|gb|AAK76556.1| unknown protein [Arabidopsis
           thaliana] gi|20197570|gb|AAD24394.2| expressed protein
           [Arabidopsis thaliana] gi|28393847|gb|AAO42331.1|
           unknown protein [Arabidopsis thaliana]
           gi|330251862|gb|AEC06956.1| CRS2-associated factor 1
           [Arabidopsis thaliana]
          Length = 701

 Score =  245 bits (625), Expect = 4e-62
 Identities = 117/183 (63%), Positives = 141/183 (77%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NVCEQLE+K GGK+IY            NYN+++RPR+PLMLWKPV+PVYPRLI+
Sbjct: 296 TVDMDNVCEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQ 355

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           Q PEGLT +EAT MR+ GR+L PICKLGKNGVY DL  +V+EAFEVCELVRI+C+GM  S
Sbjct: 356 QVPEGLTRQEATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGS 415

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSSPTISDSESEEEIVNGSSCSGSLAV 542
           D++KIG KLKDLVPCVLVSFE E IL+WRGREWKSS T  D +   +I+       +L  
Sbjct: 416 DFRKIGAKLKDLVPCVLVSFENEQILIWRGREWKSSLTTPDKKG--DILEDIEVDTALPE 473

Query: 543 EDE 551
           +DE
Sbjct: 474 DDE 476



 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
 Frame = +2

Query: 941  EGVVQLLRQAMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSE 1120
            E V+ L++QA+ESG+A+ LD A LDAD VF++ V+ S VA  GP+F             E
Sbjct: 563  ERVLILMKQAVESGTALVLDAADLDADTVFSKAVAFSSVASPGPVFQHGLRKQPTVKKQE 622

Query: 1121 QKE--------------VRSNCDEELKV----EATATFPGKRIERKTYHRNPRIKDVKEV 1246
             +E              V  N  +   V    +      G+R E K      ++ +  E 
Sbjct: 623  SQEFGYGDLEAKSSNVVVSRNASKSSNVVVFGKREVAERGER-EEKEEGSKKKMDEFAED 681

Query: 1247 YLDMLPPQGSLGVDELAKLLS 1309
            Y +++ P G+L VDELAKLL+
Sbjct: 682  YREVM-PHGTLKVDELAKLLA 701


>ref|XP_002535109.1| conserved hypothetical protein [Ricinus communis]
           gi|223524018|gb|EEF27274.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 748

 Score =  245 bits (625), Expect = 4e-62
 Identities = 116/185 (62%), Positives = 147/185 (79%), Gaps = 2/185 (1%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NVC+QLE++TGGK+IY            NYNY++RPR+PLMLWKPV+PVYPRLIK
Sbjct: 305 TVDMDNVCQQLEERTGGKVIYRKGGVVYLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLIK 364

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           + PEGLTLEEA+EMR+ GR+L PICKL KNGVY +L   VREAFE CELVRI+C+G+N S
Sbjct: 365 RAPEGLTLEEASEMRRKGRKLIPICKLAKNGVYCNLVKEVREAFEECELVRIDCQGVNGS 424

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSSPTISDSESEEEIVNGSSCSGSLA- 539
           DY+K+G KLK+LVPC+L+SFE EHILMWRGR+WKSS     ++S E I +  + + S+A 
Sbjct: 425 DYRKVGAKLKELVPCLLISFEHEHILMWRGRDWKSSMIKPVNDSVEAIGSDVNSATSIAS 484

Query: 540 -VEDE 551
            +ED+
Sbjct: 485 VLEDQ 489



 Score = 66.6 bits (161), Expect = 3e-08
 Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +2

Query: 947  VVQLLRQAMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSEQK 1126
            V+ L +QA+ESGSA+ L DA LDADIV+ R V+ +K AP GP+F             +Q+
Sbjct: 625  VLLLWKQAVESGSALILVDADLDADIVYQRAVAFAKSAPPGPVFRHRSKKASIRKSEKQE 684

Query: 1127 EVRSNCDEELKVEATATFPGKRIERKTYHRNPRIKDVKEVYLDMLPPQ-GSLGVDELAKL 1303
               S   E L +E   T   + +  +     P+ K       ++   + G LGVDELAKL
Sbjct: 685  SKDSEPKEFLNLEYLETNVSQTMGSENKSSKPQRKKKSREQQNLNSARLGRLGVDELAKL 744

Query: 1304 LS 1309
            L+
Sbjct: 745  LA 746


>gb|EXB59798.1| CRS2-associated factor 1 [Morus notabilis]
          Length = 792

 Score =  244 bits (624), Expect = 6e-62
 Identities = 125/207 (60%), Positives = 152/207 (73%), Gaps = 4/207 (1%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NV EQLE++TGGKIIY            NYNY++RPR+PLMLWKPV+PVYPRL+K
Sbjct: 317 TVDMDNVKEQLEERTGGKIIYGKGGVIFLFRGRNYNYRTRPRFPLMLWKPVTPVYPRLVK 376

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           + PEGLTLEEA EMRK G +L PICKLGKNGVY +L  HVREAFE CELVRINC+GMN S
Sbjct: 377 RVPEGLTLEEAKEMRKKGHKLMPICKLGKNGVYHNLVKHVREAFEECELVRINCQGMNGS 436

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSS-PTI---SDSESEEEIVNGSSCSG 530
           DY+KIG KLKDLVPCVL+SF  EHIL+WRG +WKSS P +    D   E ++   +S + 
Sbjct: 437 DYRKIGAKLKDLVPCVLLSFAFEHILIWRGCDWKSSLPKLVKDRDEAKESDVQIVTSVAP 496

Query: 531 SLAVEDEAASELFEGKSSNNDMNIDVI 611
           S+  E+ A S       S ND ++++I
Sbjct: 497 SVEGEEVAMS-----TGSVNDASLELI 518



 Score = 82.0 bits (201), Expect = 6e-13
 Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
 Frame = +2

Query: 863  VTNENLEVASKGLSSLNECAK-STLCTEGVVQLLRQAMESGSAVTLDDASLDADIVFNRT 1039
            + NE  +V S+ L  +N+  + +  CTEGV+ LL+QA+  G A+ LD+ +LD+D+V+ RT
Sbjct: 639  LANEKEQVPSEVLQDVNQPTRLNAPCTEGVLSLLQQAVVGGLAIILDEDNLDSDVVYQRT 698

Query: 1040 VSLSKVAPLGPIF----XXXXXXXXXXXXSEQKEVRSNCDEELKVEATATFPGKRIERKT 1207
            V+ S+ AP GP+F                SE  E      E+   +   T   K    K 
Sbjct: 699  VAFSQSAPPGPVFKGRPRKMLPKKVMVKNSEVLENEKQDTEDFAPKEIRTIYVKEGSGKK 758

Query: 1208 YHRNPRIKDVKEVYLDMLPPQGSLGVDELAKLLS 1309
              +  R KD  E   +++ PQGSL VDELAKLL+
Sbjct: 759  ASKARRRKDFGENLDNVVVPQGSLRVDELAKLLA 792


>ref|XP_004139352.1| PREDICTED: CRS2-associated factor 1, chloroplastic-like [Cucumis
           sativus] gi|449521361|ref|XP_004167698.1| PREDICTED:
           CRS2-associated factor 1, chloroplastic-like [Cucumis
           sativus]
          Length = 745

 Score =  244 bits (624), Expect = 6e-62
 Identities = 113/156 (72%), Positives = 130/156 (83%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NV +QLE++TGGKIIY            NYNYK+RPR+PLMLWKP +PVYPRL+K
Sbjct: 305 TVDMDNVKQQLEERTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLVK 364

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
             P+GLTLEE TEMRK GR+L PICKLGKNGVYS L  HVREAFE CELVRINC+G+N S
Sbjct: 365 HIPDGLTLEEVTEMRKKGRKLIPICKLGKNGVYSALVKHVREAFEECELVRINCQGLNGS 424

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSS 470
           D++KIG KLKDLVPCVL+SFE EHIL+WRGR+WKSS
Sbjct: 425 DFRKIGAKLKDLVPCVLISFESEHILLWRGRDWKSS 460



 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 59/165 (35%), Positives = 92/165 (55%)
 Frame = +2

Query: 815  ETESPPLTHLNGTSAMVTNENLEVASKGLSSLNECAKSTLCTEGVVQLLRQAMESGSAVT 994
            E +S   T  + T+ + T+E  +  +K  S+          T+GV+QLL+QA+E+GSAV 
Sbjct: 595  EFDSIAATGNSETNGLYTSEGSQALTKPTSN---------ATDGVLQLLKQAVENGSAVV 645

Query: 995  LDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSEQKEVRSNCDEELKVEATA 1174
            LD +SLDAD+++ ++V+ S+ AP  P+F            SE++  R   + E+K E TA
Sbjct: 646  LDSSSLDADVIYQQSVAFSQSAPPSPVFKHERRKKVAADKSEEETSR---ELEVKEEETA 702

Query: 1175 TFPGKRIERKTYHRNPRIKDVKEVYLDMLPPQGSLGVDELAKLLS 1309
                   ++K   +  + K+  E   +   PQGSLGVDELAKLL+
Sbjct: 703  VSMEVGNDKKKDSKTKKNKNFGE--YNFSSPQGSLGVDELAKLLA 745


>emb|CBI28022.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  243 bits (620), Expect = 2e-61
 Identities = 122/205 (59%), Positives = 148/205 (72%), Gaps = 2/205 (0%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NV +QLE+KTGGK+IY            NYNY++RPR+PLMLWKPV+PVYPRL++
Sbjct: 297 TVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQ 356

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           + PEGLTLEEA  MRK GR+L PICKL KNGVY+DL ++VREAFE CELVRINC+G+N S
Sbjct: 357 RAPEGLTLEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNAS 416

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWK-SSPTISDSESE-EEIVNGSSCSGSL 536
           DY+KIG KLKDLVPCVL+SFE EHILMWRG +WK   P   D   E +E  N S  S   
Sbjct: 417 DYRKIGAKLKDLVPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNNSEASIPP 476

Query: 537 AVEDEAASELFEGKSSNNDMNIDVI 611
             E +  S     K S  D ++D++
Sbjct: 477 PFEGQELSASCSSKISVKDTSLDML 501



 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 58/133 (43%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
 Frame = +2

Query: 935  CTEGVVQLLRQAMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXX 1114
            CT G++ LL+QA++SGSAV LD  S DADIV+ +TV+ SK AP GP+F            
Sbjct: 602  CTGGLLLLLKQAVDSGSAVVLDGDSCDADIVYGKTVAFSKDAPPGPVF-----------R 650

Query: 1115 SEQKEVRSNCDEE----LKVEATATFPGKRIERKTYHRNPRIKDVKEVYLDMLPP----Q 1270
              +K     C++E    L V    T P K   +    RN   KD KE YLD+  P    +
Sbjct: 651  RPRKAAVQKCEKEEPRDLVVGKIVTAPEKGRSQSKSSRNQIAKDFKEGYLDVDYPGVGTR 710

Query: 1271 GSLGVDELAKLLS 1309
            G+LGVDELAKLL+
Sbjct: 711  GTLGVDELAKLLA 723


>ref|XP_002280611.1| PREDICTED: CRS2-associated factor 1, chloroplastic [Vitis vinifera]
          Length = 752

 Score =  243 bits (620), Expect = 2e-61
 Identities = 122/205 (59%), Positives = 148/205 (72%), Gaps = 2/205 (0%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+NV +QLE+KTGGK+IY            NYNY++RPR+PLMLWKPV+PVYPRL++
Sbjct: 297 TVDMDNVRQQLEEKTGGKVIYGKGGVLFLFRGRNYNYRNRPRFPLMLWKPVTPVYPRLVQ 356

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           + PEGLTLEEA  MRK GR+L PICKL KNGVY+DL ++VREAFE CELVRINC+G+N S
Sbjct: 357 RAPEGLTLEEAGAMRKKGRKLIPICKLAKNGVYTDLVNNVREAFEECELVRINCQGLNAS 416

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWK-SSPTISDSESE-EEIVNGSSCSGSL 536
           DY+KIG KLKDLVPCVL+SFE EHILMWRG +WK   P   D   E +E  N S  S   
Sbjct: 417 DYRKIGAKLKDLVPCVLISFEHEHILMWRGSDWKFLHPKPEDGCKEAKESDNNSEASIPP 476

Query: 537 AVEDEAASELFEGKSSNNDMNIDVI 611
             E +  S     K S  D ++D++
Sbjct: 477 PFEGQELSASCSSKISVKDTSLDML 501



 Score = 88.2 bits (217), Expect = 9e-15
 Identities = 63/168 (37%), Positives = 86/168 (51%), Gaps = 19/168 (11%)
 Frame = +2

Query: 863  VTNENLEVASKGLSSLNECAK-----------STLCTEGVVQLLRQAMESGSAVTLDDAS 1009
            + NE ++  +  +  L +  K           S  CT G++ LL+QA++SGSAV LD  S
Sbjct: 596  IKNELMDAVTHDMDKLQDIPKASQDCGKMTGSSAPCTGGLLLLLKQAVDSGSAVVLDGDS 655

Query: 1010 LDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSEQKEVRSNCDEE----LKVEATAT 1177
             DADIV+ +TV+ SK AP GP+F              +K     C++E    L V    T
Sbjct: 656  CDADIVYGKTVAFSKDAPPGPVF-----------RRPRKAAVQKCEKEEPRDLVVGKIVT 704

Query: 1178 FPGKRIERKTYHRNPRIKDVKEVYLDMLPP----QGSLGVDELAKLLS 1309
             P K   +    RN   KD KE YLD+  P    +G+LGVDELAKLL+
Sbjct: 705  APEKGRSQSKSSRNQIAKDFKEGYLDVDYPGVGTRGTLGVDELAKLLA 752


>ref|XP_006297110.1| hypothetical protein CARUB_v10013113mg [Capsella rubella]
           gi|482565819|gb|EOA30008.1| hypothetical protein
           CARUB_v10013113mg [Capsella rubella]
          Length = 689

 Score =  243 bits (619), Expect = 2e-61
 Identities = 114/186 (61%), Positives = 143/186 (76%)
 Frame = +3

Query: 3   TVDMENVCEQLEDKTGGKIIYXXXXXXXXXXXXNYNYKSRPRYPLMLWKPVSPVYPRLIK 182
           TVDM+N+CEQLE+K GGK+IY            NYN+++RPR+PLMLWKPV+PVYP+LI+
Sbjct: 296 TVDMDNICEQLEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPKLIQ 355

Query: 183 QTPEGLTLEEATEMRKTGRQLQPICKLGKNGVYSDLADHVREAFEVCELVRINCEGMNPS 362
           Q PEGLT  EATEMR+ GR+L PICKLGKNGVY DL  +V+EAFEVCELVRI+C+G+  S
Sbjct: 356 QVPEGLTRLEATEMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGLKAS 415

Query: 363 DYKKIGGKLKDLVPCVLVSFEREHILMWRGREWKSSPTISDSESEEEIVNGSSCSGSLAV 542
           D++KIG KLKDLVPCVL+SFE E IL+WRGREWKSS T  D   +++ +       +L  
Sbjct: 416 DFRKIGAKLKDLVPCVLISFENEQILIWRGREWKSSLTTPD--KKDDYLRDIEVDTALPE 473

Query: 543 EDEAAS 560
           +DE +S
Sbjct: 474 DDEPSS 479



 Score = 65.5 bits (158), Expect = 6e-08
 Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 7/182 (3%)
 Frame = +2

Query: 785  MVSENTRQGSETESPPLTHLNGTSAMVTNENLEVASKGLSSLNECAKSTLCTEGVVQLLR 964
            +  E T     + S  +T L   S++  ++  E   +      E +K ++  E V+ L+ 
Sbjct: 514  LAMEGTSSSLRSLSTDVTELTADSSLGDDQEPEPEPE---KSEEISKQSI--ERVLNLMN 568

Query: 965  QAMESGSAVTLDDASLDADIVFNRTVSLSKVAPLGPIFXXXXXXXXXXXXSEQKEVRSNC 1144
            QA+ESG+A+ LD   LDAD VF + V+ S VA  GP F             E++E     
Sbjct: 569  QAVESGTALVLDSTELDADTVFAKAVAFSAVAAPGPAFQHGLRKQPMVKKQEKRESGYRS 628

Query: 1145 DEE------LKVEATATFPGKRIERKTY-HRNPRIKDVKEVYLDMLPPQGSLGVDELAKL 1303
             E       + V+    F  KR E++       +I +  E Y ++L P G+L VDELAKL
Sbjct: 629  VEAKVSNVVVTVKKEVAFSVKREEKEEEGGLKKKIDEFDEDYREVL-PHGTLKVDELAKL 687

Query: 1304 LS 1309
            L+
Sbjct: 688  LA 689