BLASTX nr result
ID: Papaver27_contig00010677
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00010677
(375 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr... 104 1e-20
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil... 102 5e-20
ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prun... 102 5e-20
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I... 101 9e-20
gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun... 101 1e-19
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I... 101 1e-19
ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II a... 100 4e-19
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun... 100 4e-19
ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II a... 99 8e-19
ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, I... 98 1e-18
ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, I... 98 1e-18
ref|XP_006381734.1| DNA-directed RNA polymerase family protein [... 97 3e-18
ref|XP_006451217.1| hypothetical protein CICLE_v10009504mg [Citr... 96 4e-18
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus... 96 7e-18
ref|XP_004143184.1| PREDICTED: DNA-directed RNA polymerases I, I... 95 1e-17
ref|XP_007013105.1| Eukaryotic rpb5 RNA polymerase subunit famil... 94 1e-17
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin... 92 6e-17
gb|AFK38034.1| unknown [Lotus japonicus] 92 7e-17
ref|XP_007152860.1| hypothetical protein PHAVU_004G166200g [Phas... 92 1e-16
gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlise... 91 1e-16
>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|567918420|ref|XP_006451216.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X1
[Citrus sinensis] gi|568843558|ref|XP_006475671.1|
PREDICTED: DNA-directed RNA polymerases II and IV
subunit 5A-like isoform X2 [Citrus sinensis]
gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A-like isoform X3
[Citrus sinensis] gi|557554441|gb|ESR64455.1|
hypothetical protein CICLE_v10009504mg [Citrus
clementina] gi|557554442|gb|ESR64456.1| hypothetical
protein CICLE_v10009504mg [Citrus clementina]
Length = 206
Score = 104 bits (259), Expect = 1e-20
Identities = 49/69 (71%), Positives = 59/69 (85%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+SDEEI RLFRIRRTVMQML DRGY VGDFEIN ++ +F+AKFG+N++RE+L I K+ RN
Sbjct: 3 LSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRN 62
Query: 29 DSDDHIYVF 3
DS D IYVF
Sbjct: 63 DSSDQIYVF 71
>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
rpb5 RNA polymerase subunit family protein isoform 1
[Theobroma cacao]
Length = 206
Score = 102 bits (254), Expect = 5e-20
Identities = 46/69 (66%), Positives = 60/69 (86%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+SD+EI RLFRIR+TVMQML DRGY VGDFEI T+A+F++K+G+N++RE+L I K+KRN
Sbjct: 3 LSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRN 62
Query: 29 DSDDHIYVF 3
D+ D IYVF
Sbjct: 63 DNSDQIYVF 71
>ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prunus persica]
gi|462416214|gb|EMJ20951.1| hypothetical protein
PRUPE_ppa024345mg [Prunus persica]
Length = 206
Score = 102 bits (254), Expect = 5e-20
Identities = 47/69 (68%), Positives = 59/69 (85%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+ +EEITRL+R+RRTVMQML DR YLVGDFEIN TR +F AK+G+N++RE+L I K+KRN
Sbjct: 3 LPEEEITRLYRVRRTVMQMLRDRKYLVGDFEINMTREQFKAKYGENMKREDLTINKTKRN 62
Query: 29 DSDDHIYVF 3
DS D +YVF
Sbjct: 63 DSTDQLYVF 71
>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1 isoform 1 [Vitis vinifera]
gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1 isoform 2
[Vitis vinifera]
Length = 206
Score = 101 bits (252), Expect = 9e-20
Identities = 47/68 (69%), Positives = 59/68 (86%)
Frame = -2
Query: 206 SDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRND 27
S+EEI+RLFRIR+TVMQML DRGY VGDFEIN T+ +F++KFG+N++RE+L I K+KR D
Sbjct: 4 SEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTD 63
Query: 26 SDDHIYVF 3
S D IYVF
Sbjct: 64 SSDQIYVF 71
>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
notabilis]
Length = 253
Score = 101 bits (251), Expect = 1e-19
Identities = 47/69 (68%), Positives = 59/69 (85%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+S++EITRLFRIRRTVMQML DR YLVGDFE+N T+ +F K+G+N++RE+L I KS+RN
Sbjct: 3 LSEDEITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKSRRN 62
Query: 29 DSDDHIYVF 3
DS D IYVF
Sbjct: 63 DSPDQIYVF 71
>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 207
Score = 101 bits (251), Expect = 1e-19
Identities = 47/69 (68%), Positives = 58/69 (84%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+S+EEITRLFRIR+TV QML DRGY VGDFEI+ TR +F K+G+N++RE++ I KSKRN
Sbjct: 3 LSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRN 62
Query: 29 DSDDHIYVF 3
DS D IYVF
Sbjct: 63 DSSDQIYVF 71
>ref|XP_006353289.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 99.8 bits (247), Expect = 4e-19
Identities = 43/69 (62%), Positives = 63/69 (91%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+S+EE++RLFR+R+T+M+ML+DRGYLVGDFEIN ++ EFL K+G+N++RE+L ++K+KRN
Sbjct: 3 LSEEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKYEFLQKYGENMKREDLVLQKAKRN 62
Query: 29 DSDDHIYVF 3
+S D IYVF
Sbjct: 63 NSSDQIYVF 71
>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
gi|462414880|gb|EMJ19617.1| hypothetical protein
PRUPE_ppa011542mg [Prunus persica]
Length = 206
Score = 99.8 bits (247), Expect = 4e-19
Identities = 45/67 (67%), Positives = 58/67 (86%)
Frame = -2
Query: 203 DEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRNDS 24
+EEITRL+R+R+TVMQML DR YLVGDFEIN TR +F +K+G+N++RE+L I K+KR+DS
Sbjct: 5 EEEITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKTKRSDS 64
Query: 23 DDHIYVF 3
D IYVF
Sbjct: 65 SDQIYVF 71
>ref|XP_006355533.1| PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Solanum tuberosum]
Length = 206
Score = 98.6 bits (244), Expect = 8e-19
Identities = 42/69 (60%), Positives = 63/69 (91%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+S+EE++RLFR+R+T+M+ML+DRGYLVGDFEIN ++ +FL K+G+N++RE+L ++K+KRN
Sbjct: 3 LSEEELSRLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVLQKAKRN 62
Query: 29 DSDDHIYVF 3
+S D IYVF
Sbjct: 63 NSSDQIYVF 71
>ref|XP_004239999.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like isoform 1 [Solanum lycopersicum]
gi|460388693|ref|XP_004240000.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
isoform 2 [Solanum lycopersicum]
Length = 206
Score = 98.2 bits (243), Expect = 1e-18
Identities = 42/69 (60%), Positives = 63/69 (91%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+S+EE+++LFR+R+T+M+ML+DRGYLVGDFEIN ++ +FL K+G+N++RE+L I+K+KRN
Sbjct: 3 LSEEELSKLFRVRKTLMEMLSDRGYLVGDFEINMSKHQFLQKYGENMKREDLVIQKAKRN 62
Query: 29 DSDDHIYVF 3
+S D IYVF
Sbjct: 63 NSSDQIYVF 71
>ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
Length = 208
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/68 (64%), Positives = 57/68 (83%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+S+EEITRLFRIR+TV QML DRGY VGDFEI+ TR +F K+G+N++RE++ I KSKRN
Sbjct: 3 LSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSKRN 62
Query: 29 DSDDHIYV 6
DS D +Y+
Sbjct: 63 DSSDQVYI 70
>ref|XP_006381734.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550336487|gb|ERP59531.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 206
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/69 (65%), Positives = 57/69 (82%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+++EEI RL RIR+TVMQML DRGY VGDFEI TR +F +K+G+N++RE+L I K+KRN
Sbjct: 3 LTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTKRN 62
Query: 29 DSDDHIYVF 3
DS D IYVF
Sbjct: 63 DSSDQIYVF 71
>ref|XP_006451217.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
gi|557554443|gb|ESR64457.1| hypothetical protein
CICLE_v10009504mg [Citrus clementina]
Length = 146
Score = 96.3 bits (238), Expect = 4e-18
Identities = 45/64 (70%), Positives = 55/64 (85%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+SDEEI RLFRIRRTVMQML DRGY VGDFEIN ++ +F+AKFG+N++RE+L I K+ RN
Sbjct: 3 LSDEEIKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKALRN 62
Query: 29 DSDD 18
DS D
Sbjct: 63 DSSD 66
>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
Length = 206
Score = 95.5 bits (236), Expect = 7e-18
Identities = 43/69 (62%), Positives = 57/69 (82%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+SDEEITRL R+R+ VMQML DRGY+VGDFEI+ T+ +FL K+G+N++RE+L I K RN
Sbjct: 3 LSDEEITRLVRVRKNVMQMLKDRGYMVGDFEIDMTKYQFLQKYGENMKREDLVINKGLRN 62
Query: 29 DSDDHIYVF 3
+S D IY+F
Sbjct: 63 NSSDQIYIF 71
>ref|XP_004143184.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
RPABC1-like [Cucumis sativus]
gi|449524595|ref|XP_004169307.1| PREDICTED: DNA-directed
RNA polymerases I, II, and III subunit RPABC1-like
[Cucumis sativus]
Length = 207
Score = 94.7 bits (234), Expect = 1e-17
Identities = 42/67 (62%), Positives = 57/67 (85%)
Frame = -2
Query: 203 DEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRNDS 24
+EEIT+LFR+R+TV+QML DRGY VGDFE++ ++ +F KFG+N++RE+L I KSKRN+S
Sbjct: 5 EEEITKLFRVRKTVLQMLKDRGYFVGDFELDMSKVQFKNKFGENMKREDLVINKSKRNNS 64
Query: 23 DDHIYVF 3
D IYVF
Sbjct: 65 SDQIYVF 71
>ref|XP_007013105.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 2,
partial [Theobroma cacao] gi|508783468|gb|EOY30724.1|
Eukaryotic rpb5 RNA polymerase subunit family protein
isoform 2, partial [Theobroma cacao]
Length = 181
Score = 94.4 bits (233), Expect = 1e-17
Identities = 42/64 (65%), Positives = 56/64 (87%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+SD+EI RLFRIR+TVMQML DRGY VGDFEI T+A+F++K+G+N++RE+L I K+KRN
Sbjct: 38 LSDDEIKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKTKRN 97
Query: 29 DSDD 18
D+ D
Sbjct: 98 DNSD 101
>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
gi|255625665|gb|ACU13177.1| unknown [Glycine max]
Length = 206
Score = 92.4 bits (228), Expect = 6e-17
Identities = 42/69 (60%), Positives = 60/69 (86%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+S+EE+ RL+RIR+TVMQML DRG+LVGDFEIN ++ EF +K+G++++RE+L I KSK++
Sbjct: 3 LSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSKKD 62
Query: 29 DSDDHIYVF 3
+S D IYVF
Sbjct: 63 NSGDQIYVF 71
>gb|AFK38034.1| unknown [Lotus japonicus]
Length = 206
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/69 (60%), Positives = 56/69 (81%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+++E+IT+L RIR+TVMQML DR YLVGDFEIN +R EF K+GDN++RE+L I K+K++
Sbjct: 3 LTEEDITKLHRIRKTVMQMLRDRNYLVGDFEINMSRHEFKTKYGDNMKREDLTINKTKKD 62
Query: 29 DSDDHIYVF 3
D IYVF
Sbjct: 63 GPSDQIYVF 71
>ref|XP_007152860.1| hypothetical protein PHAVU_004G166200g [Phaseolus vulgaris]
gi|561026169|gb|ESW24854.1| hypothetical protein
PHAVU_004G166200g [Phaseolus vulgaris]
Length = 207
Score = 91.7 bits (226), Expect = 1e-16
Identities = 43/70 (61%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKF-GDNLRRENLDIKKSKR 33
++DEEI+RL+RIR+TVM ML DRGYLVGDFEIN ++ EF + G+N++RE+LD+ KSK+
Sbjct: 3 LTDEEISRLYRIRKTVMHMLRDRGYLVGDFEINMSKHEFKSSHGGENMKREDLDLNKSKK 62
Query: 32 NDSDDHIYVF 3
++S D IYVF
Sbjct: 63 DNSSDQIYVF 72
>gb|EPS66115.1| hypothetical protein M569_08662, partial [Genlisea aurea]
Length = 208
Score = 91.3 bits (225), Expect = 1e-16
Identities = 39/69 (56%), Positives = 57/69 (82%)
Frame = -2
Query: 209 MSDEEITRLFRIRRTVMQMLNDRGYLVGDFEINETRAEFLAKFGDNLRRENLDIKKSKRN 30
+S+E+ITRL+RIR+T+MQML DRGY+VGDFEI T+++F+ K+G+N++RE+ + K RN
Sbjct: 4 LSEEQITRLYRIRKTLMQMLKDRGYIVGDFEIEMTKSQFIQKYGENMKREDQTVLKGLRN 63
Query: 29 DSDDHIYVF 3
+ D IYVF
Sbjct: 64 NPSDQIYVF 72