BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00010671
         (3142 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1702   0.0  
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s...  1692   0.0  
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...  1692   0.0  
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...  1691   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1675   0.0  
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...  1675   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1674   0.0  
ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob...  1662   0.0  
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...  1661   0.0  
ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III s...  1654   0.0  
ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III s...  1651   0.0  
ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III s...  1640   0.0  
ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phas...  1631   0.0  
ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Caps...  1618   0.0  
ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III s...  1618   0.0  
ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III s...  1612   0.0  
ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutr...  1611   0.0  
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab...  1603   0.0  
ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis t...  1602   0.0  
ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III s...  1596   0.0  

>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1702 bits (4408), Expect = 0.0
 Identities = 843/1040 (81%), Positives = 934/1040 (89%), Gaps = 12/1040 (1%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPILV+I Y  G   ++   +K +V+IGRMP+MLRSC CVL  KDEAELARLGECPLD
Sbjct: 103  YAAPILVNIEYITGSHVQKTRVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLD 162

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF+VKGTEKVILIQEQLSKNRIII+TDKKG++ ASVTSSTE+TKSKTVI+M+KEKI+
Sbjct: 163  PGGYFVVKGTEKVILIQEQLSKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIW 222

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            LQLN F   +PIM+VMKAMG+ESDQEVVQMVGR+PRY+ALLLPS++ECA+  I+ QQQAL
Sbjct: 223  LQLNQFTSKIPIMIVMKAMGMESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQAL 282

Query: 2601 EYLDNKVKKFAFSN--VNQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
            E+L+ KVKK  F N  + +EGR ++ILRD F+ANVPVR+ +FRPKC+Y AVMLRRMMDAI
Sbjct: 283  EFLERKVKKLPFYNPSLEKEGRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAI 342

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTKNLARS-FDNSN 2251
            LNKDA+DDKDYVGNKRLELSGQLISLLFEDLFKTM  EVKK +D  L K    S FD S 
Sbjct: 343  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQ 402

Query: 2250 ---YLTRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEK 2080
               ++ RDSIT GLER LSTGNWD+KRF+MHRKGM+QV+ARLS+I S+GHMTK+SPQFEK
Sbjct: 403  CLRFIVRDSITVGLERTLSTGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEK 462

Query: 2079 SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVE 1900
            SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEE PLISLC+SLGVE
Sbjct: 463  SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVE 522

Query: 1899 GLELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQR 1720
             LELLS EELHTPNSFL+IFNGLILGKHR+PQRFA  +RKLRRAGKIGEFVSV+VN+KQ 
Sbjct: 523  DLELLSGEELHTPNSFLIIFNGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQH 582

Query: 1719 CVYIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNA 1540
            CVYIASDGGRVCRP+VIADKG SRIKEHHM+E+ DGVRTF+DFLR+GLIEYLDVNE+NNA
Sbjct: 583  CVYIASDGGRVCRPVVIADKGKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNA 642

Query: 1539 LIALYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQ 1360
            LIALYE + K   THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQ
Sbjct: 643  LIALYEADAKPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQ 702

Query: 1359 LSRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 1180
            L RMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS
Sbjct: 703  LCRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSS 762

Query: 1179 LDRGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPY 1000
            LDRGFGRCIV+KK  A+ Q+Y NN  DRI RP + G D  +M++LD+DG+AAPGEII+P 
Sbjct: 763  LDRGFGRCIVMKKFSAVNQRYENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPN 822

Query: 999  DIYVNKEVPMNTKD------NSQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIK 838
            DIY+NKE P+ TK          +  +KPS QT+KG +GE +V+DRVAL SD N+NLCIK
Sbjct: 823  DIYINKESPIITKGPLISPVGLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIK 882

Query: 837  FQIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGK 658
            F IRHTRRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GK
Sbjct: 883  FLIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGK 942

Query: 657  MIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSP 478
            MIELLGGKAGVSCGRFHYGSAFGEPSGHAD VE ISKTLV+ GFSY+GKDF+YSGITG P
Sbjct: 943  MIELLGGKAGVSCGRFHYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCP 1002

Query: 477  LQAYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIA 298
            LQAYIFMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIA
Sbjct: 1003 LQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIA 1062

Query: 297  YGASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACK 118
            YGASMLI+ERLM+SSDPFEVQVCRVCGLLGYYNHKLK GICS+CKNG+NIS MKLPYACK
Sbjct: 1063 YGASMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACK 1122

Query: 117  LLFQELQSMNIVPRLKLTEA 58
            LLFQELQ+MN+VPRLKLTEA
Sbjct: 1123 LLFQELQAMNVVPRLKLTEA 1142


>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X3 [Citrus sinensis]
          Length = 1058

 Score = 1692 bits (4381), Expect = 0.0
 Identities = 837/1037 (80%), Positives = 929/1037 (89%), Gaps = 9/1037 (0%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPILV+I Y +G    +   +K +V+IGR+P+MLRSCRCVL GKDEAELARLGECPLD
Sbjct: 22   YAAPILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLD 81

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYFI+KGTEKV+LIQEQLSKNR+II+TDKKG++ ASVTSSTE  KSKTVI M+K K++
Sbjct: 82   PGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMY 141

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L LN F K +PIMVVMKAMGIESDQEVVQMVGRDPRY+ALLLPSI+ECA  +I+ Q++AL
Sbjct: 142  LLLNQFVKKIPIMVVMKAMGIESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKAL 201

Query: 2601 EYLDNKVKKFAFSNV--NQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
            EYL+ KVK+  F +   ++EGRA SILRDVFLANVPV   +FRPKC Y AVMLRRM++A+
Sbjct: 202  EYLEGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAM 261

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTKNLARS-FDNSN 2251
            LNKDA+DDKDYVGNKRLELSGQL+SLLFEDLFKTM  EV+K +D+ L+K    S FD S 
Sbjct: 262  LNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQ 321

Query: 2250 YLTRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKSRK 2071
            ++ RDSIT GLER LSTGN+D+KRFKMHRKGMTQVLARLSFI ++GHMT+VSPQFEKSRK
Sbjct: 322  FIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRK 381

Query: 2070 VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEGLE 1891
            VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLC+ LGVE LE
Sbjct: 382  VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLE 441

Query: 1890 LLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRCVY 1711
            LLS EELH PNSFLVIFNGLILGKHR+P+ FA  MRKLRRAGKIGEFVSV+VN+KQRCVY
Sbjct: 442  LLSGEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVY 501

Query: 1710 IASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNALIA 1531
            IASDGGRVCRPLVIADKGISRIKEHHM+E+ DGVR+F+DFLREGLIEYLDVNE+NNALIA
Sbjct: 502  IASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIA 561

Query: 1530 LYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLSR 1351
            LYEG+     THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL R
Sbjct: 562  LYEGDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCR 621

Query: 1350 MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1171
            MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR
Sbjct: 622  MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 681

Query: 1170 GFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYDIY 991
            GFGRCIV+KK  AI QKY N+T DRI RPDR G    +M++LD+DG+AAPGEII+P D+Y
Sbjct: 682  GFGRCIVVKKYTAINQKYANSTSDRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVY 741

Query: 990  VNKEVPMNTKDN------SQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIKFQI 829
            +NKE P+ T+ +        + +++ + QTYKG  GE  V+DRVAL SD N +LCIKF I
Sbjct: 742  INKESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLI 801

Query: 828  RHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIE 649
            RHTRRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIE
Sbjct: 802  RHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIE 861

Query: 648  LLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSPLQA 469
            LLGGKAGVSCGRFHYGSAFGEPSGHADTVE+IS+TLV+ GFSYNGKD +YSGITG PLQA
Sbjct: 862  LLGGKAGVSCGRFHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQA 921

Query: 468  YIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 289
            YIFMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGA
Sbjct: 922  YIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGA 981

Query: 288  SMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACKLLF 109
            SMLI+ERLM+SSDPFEVQVCRVCGLLGYYNHKLK GICS+CKNG+NIS MKLPYACKLL 
Sbjct: 982  SMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLI 1041

Query: 108  QELQSMNIVPRLKLTEA 58
            QELQSMNIVPRLKL EA
Sbjct: 1042 QELQSMNIVPRLKLAEA 1058


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Citrus sinensis] gi|568883651|ref|XP_006494573.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Citrus sinensis]
          Length = 1149

 Score = 1692 bits (4381), Expect = 0.0
 Identities = 837/1037 (80%), Positives = 929/1037 (89%), Gaps = 9/1037 (0%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPILV+I Y +G    +   +K +V+IGR+P+MLRSCRCVL GKDEAELARLGECPLD
Sbjct: 113  YAAPILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLD 172

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYFI+KGTEKV+LIQEQLSKNR+II+TDKKG++ ASVTSSTE  KSKTVI M+K K++
Sbjct: 173  PGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMY 232

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L LN F K +PIMVVMKAMGIESDQEVVQMVGRDPRY+ALLLPSI+ECA  +I+ Q++AL
Sbjct: 233  LLLNQFVKKIPIMVVMKAMGIESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKAL 292

Query: 2601 EYLDNKVKKFAFSNV--NQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
            EYL+ KVK+  F +   ++EGRA SILRDVFLANVPV   +FRPKC Y AVMLRRM++A+
Sbjct: 293  EYLEGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAM 352

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTKNLARS-FDNSN 2251
            LNKDA+DDKDYVGNKRLELSGQL+SLLFEDLFKTM  EV+K +D+ L+K    S FD S 
Sbjct: 353  LNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQ 412

Query: 2250 YLTRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKSRK 2071
            ++ RDSIT GLER LSTGN+D+KRFKMHRKGMTQVLARLSFI ++GHMT+VSPQFEKSRK
Sbjct: 413  FIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRK 472

Query: 2070 VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEGLE 1891
            VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLC+ LGVE LE
Sbjct: 473  VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLE 532

Query: 1890 LLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRCVY 1711
            LLS EELH PNSFLVIFNGLILGKHR+P+ FA  MRKLRRAGKIGEFVSV+VN+KQRCVY
Sbjct: 533  LLSGEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVY 592

Query: 1710 IASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNALIA 1531
            IASDGGRVCRPLVIADKGISRIKEHHM+E+ DGVR+F+DFLREGLIEYLDVNE+NNALIA
Sbjct: 593  IASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRSFDDFLREGLIEYLDVNEENNALIA 652

Query: 1530 LYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLSR 1351
            LYEG+     THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL R
Sbjct: 653  LYEGDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCR 712

Query: 1350 MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1171
            MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR
Sbjct: 713  MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 772

Query: 1170 GFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYDIY 991
            GFGRCIV+KK  AI QKY N+T DRI RPDR G    +M++LD+DG+AAPGEII+P D+Y
Sbjct: 773  GFGRCIVVKKYTAINQKYANSTSDRILRPDRTGPGAERMQILDDDGLAAPGEIIKPNDVY 832

Query: 990  VNKEVPMNTKDN------SQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIKFQI 829
            +NKE P+ T+ +        + +++ + QTYKG  GE  V+DRVAL SD N +LCIKF I
Sbjct: 833  INKESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLI 892

Query: 828  RHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIE 649
            RHTRRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIE
Sbjct: 893  RHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIE 952

Query: 648  LLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSPLQA 469
            LLGGKAGVSCGRFHYGSAFGEPSGHADTVE+IS+TLV+ GFSYNGKD +YSGITG PLQA
Sbjct: 953  LLGGKAGVSCGRFHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQA 1012

Query: 468  YIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 289
            YIFMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGA
Sbjct: 1013 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGA 1072

Query: 288  SMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACKLLF 109
            SMLI+ERLM+SSDPFEVQVCRVCGLLGYYNHKLK GICS+CKNG+NIS MKLPYACKLL 
Sbjct: 1073 SMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICSTCKNGDNISSMKLPYACKLLI 1132

Query: 108  QELQSMNIVPRLKLTEA 58
            QELQSMNIVPRLKL EA
Sbjct: 1133 QELQSMNIVPRLKLAEA 1149


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
            gi|557534507|gb|ESR45625.1| hypothetical protein
            CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score = 1691 bits (4378), Expect = 0.0
 Identities = 836/1037 (80%), Positives = 928/1037 (89%), Gaps = 9/1037 (0%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPILV+I Y +G    +   +K +V+IGR+P+MLRSCRCVL GKDEAELARLGECPLD
Sbjct: 113  YAAPILVNIEYVQGSHTEKTTMEKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLD 172

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYFI+KGTEKV+LIQEQLSKNR+II+TDKKG++ ASVTSSTE  KSKTVI M+K K++
Sbjct: 173  PGGYFIIKGTEKVLLIQEQLSKNRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMY 232

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L LN F K +PIMVVMKAMG+ESDQEVVQMVGRDPRY+ALLLPSI+ECA  +I+ Q++AL
Sbjct: 233  LLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKAL 292

Query: 2601 EYLDNKVKKFAFSNV--NQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
            EYL+ KVK+  F +   ++EGRA SILRDVFLANVPV   +FRPKC Y AVMLRRM++A+
Sbjct: 293  EYLEGKVKRSTFGSPPNDREGRAFSILRDVFLANVPVHNNNFRPKCFYVAVMLRRMVEAM 352

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTKNLARS-FDNSN 2251
            LNKDA+DDKDYVGNKRLELSGQL+SLLFEDLFKTM  EV+K +D+ L+K    S FD S 
Sbjct: 353  LNKDAMDDKDYVGNKRLELSGQLVSLLFEDLFKTMISEVQKTVDIILSKPSRSSRFDLSQ 412

Query: 2250 YLTRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKSRK 2071
            ++ RDSIT GLER LSTGN+D+KRFKMHRKGMTQVLARLSFI ++GHMT+VSPQFEKSRK
Sbjct: 413  FIVRDSITVGLERTLSTGNFDVKRFKMHRKGMTQVLARLSFIGTLGHMTRVSPQFEKSRK 472

Query: 2070 VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEGLE 1891
            VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLC+ LGVE LE
Sbjct: 473  VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLGVEDLE 532

Query: 1890 LLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRCVY 1711
            LLS EELH PNSFLVIFNGLILGKHR+P+ FA  MRKLRRAGKIGEFVSV+VN+KQRCVY
Sbjct: 533  LLSGEELHNPNSFLVIFNGLILGKHRRPKCFADVMRKLRRAGKIGEFVSVFVNEKQRCVY 592

Query: 1710 IASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNALIA 1531
            IASDGGRVCRPLVIADKGISRIKEHHM+E+ DGVR+F+DFLREGLIEYLDVNE+NNALIA
Sbjct: 593  IASDGGRVCRPLVIADKGISRIKEHHMKELSDGVRSFDDFLREGLIEYLDVNEENNALIA 652

Query: 1530 LYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLSR 1351
            LYEG+     THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL R
Sbjct: 653  LYEGDATPDTTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQLCR 712

Query: 1350 MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1171
            MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR
Sbjct: 713  MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 772

Query: 1170 GFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYDIY 991
            GFGRCIV+KK  AI QKY N+T DRI RPDR G    +M++LD+DG+AAPGEII+P D+Y
Sbjct: 773  GFGRCIVVKKYTAINQKYANSTSDRILRPDRTGPGSERMQILDDDGLAAPGEIIKPNDVY 832

Query: 990  VNKEVPMNTKDN------SQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIKFQI 829
            +NKE P+ T+ +        + +++ + QTYKG  GE  V+DRVAL SD N +LCIKF I
Sbjct: 833  INKESPLETRGSIMSPTGQTDSRYRSARQTYKGPDGETCVVDRVALCSDKNGDLCIKFLI 892

Query: 828  RHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIE 649
            RHTRRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIE
Sbjct: 893  RHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIE 952

Query: 648  LLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSPLQA 469
            LLGGKAGVSCGRFHYGSAFGEPSGHADTVE+IS+TLV+ GFSYNGKD +YSGITG PLQA
Sbjct: 953  LLGGKAGVSCGRFHYGSAFGEPSGHADTVESISETLVKHGFSYNGKDMIYSGITGCPLQA 1012

Query: 468  YIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGA 289
            YIFMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGA
Sbjct: 1013 YIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGA 1072

Query: 288  SMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACKLLF 109
            SMLI+ERLM+SSDPFEVQVCRVCGLLGYYNHKLK GICS+CKNG NIS MKLPYACKLL 
Sbjct: 1073 SMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICSTCKNGNNISSMKLPYACKLLI 1132

Query: 108  QELQSMNIVPRLKLTEA 58
            QELQSMNIVPRLKL EA
Sbjct: 1133 QELQSMNIVPRLKLAEA 1149


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1675 bits (4339), Expect = 0.0
 Identities = 837/1035 (80%), Positives = 926/1035 (89%), Gaps = 7/1035 (0%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPILV++ Y  G  +++   +K +V+IGRMP+MLRS  CVL GKDEAELARLGECPLD
Sbjct: 119  YAAPILVNVEYIYGSHDQKTRVEKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLD 178

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KGTEKVILIQEQLSKNRIII+TDKKG++ ASVTSSTEATKSKT+I M+KEK++
Sbjct: 179  PGGYFVIKGTEKVILIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMY 238

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L LN F K +PIMVV+KAMG+ESDQEVVQMVGRDPRY+ALLLPSI+ECA  +I+ QQ+AL
Sbjct: 239  LCLNQFVKKIPIMVVIKAMGMESDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKAL 298

Query: 2601 EYLDNKVKKFAFSNVNQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAILN 2422
            EYLD K           E RAL+ILRDVFLANVPV + +FRPKC+Y AVMLRRMM+A+LN
Sbjct: 299  EYLDGK-----------ENRALTILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLN 347

Query: 2421 KDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTK-NLARSFDNSNYL 2245
            KDA+DDKDYVGNKRLELSGQLISLLFEDLFKTM  EV++ +D  LTK N +  FD + Y+
Sbjct: 348  KDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYI 407

Query: 2244 TRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKSRKVS 2065
             RD+IT GLER LSTGN+D+KRFKMHRKGMTQVL RLS+IAS+G MT+VSPQFEKSRKVS
Sbjct: 408  VRDNITNGLERTLSTGNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVS 467

Query: 2064 GPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEGLELL 1885
            GPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD+EEGPLISLC+ LGVE LELL
Sbjct: 468  GPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELL 527

Query: 1884 SAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRCVYIA 1705
            S EELHTPNSFLVIFNGLILGKHR+PQ F  +MRKLRRAGKIGEFVSV+VN+KQR VY+A
Sbjct: 528  SGEELHTPNSFLVIFNGLILGKHRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLA 587

Query: 1704 SDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNALIALY 1525
            SDGGRVCRPLVIAD+G+SRIKEHHM+E+RDGVRTF+DFLR+GLIEYLDVNE+NNAL+ALY
Sbjct: 588  SDGGRVCRPLVIADRGVSRIKEHHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALY 647

Query: 1524 EGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLSRMD 1345
            EGE     THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD
Sbjct: 648  EGEATPETTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMD 707

Query: 1344 SLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGF 1165
            SLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGF
Sbjct: 708  SLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGF 767

Query: 1164 GRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYDIYVN 985
            GRCIV+KK  AI QKY N   DRI RPDR      + +VLD DG+AAPGEII+P DIYV 
Sbjct: 768  GRCIVMKKYPAIRQKYENGASDRILRPDR---TVERERVLDYDGLAAPGEIIKPSDIYVK 824

Query: 984  KEVPMNT----KDNS--QNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIKFQIRH 823
            KE P++T    K ++  +NI+++PS  +YKG +GE  VIDRVALSSD NNNLCIK  IRH
Sbjct: 825  KECPIDTMGPVKSSAALENIKYRPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRH 884

Query: 822  TRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELL 643
            TRRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELL
Sbjct: 885  TRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELL 944

Query: 642  GGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSPLQAYI 463
            GGKAGVSCGRFHYGSAFGEPSGHADTVEAIS+TLV +GFSYNGKD +YSGITG PLQAYI
Sbjct: 945  GGKAGVSCGRFHYGSAFGEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYI 1004

Query: 462  FMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASM 283
            FMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASM
Sbjct: 1005 FMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASM 1064

Query: 282  LIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACKLLFQE 103
            LI+ERLMISSDPFEVQVCRVCGLLGY+N KL+ GICS+CKNG+NIS MKLPYACKLL QE
Sbjct: 1065 LIFERLMISSDPFEVQVCRVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQE 1124

Query: 102  LQSMNIVPRLKLTEA 58
            LQSMNIVPRLKL EA
Sbjct: 1125 LQSMNIVPRLKLAEA 1139


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1158

 Score = 1675 bits (4338), Expect = 0.0
 Identities = 831/1038 (80%), Positives = 928/1038 (89%), Gaps = 10/1038 (0%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI V+I Y +G   ++   +K +++IGRMP+MLRSC CVL GKDEAELARLGECPLD
Sbjct: 121  YAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLD 180

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KG EKVILIQEQLSKNRIII+ DKKG++ ASVTSS+EATKSKTVI M+KEKI+
Sbjct: 181  PGGYFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIY 240

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L LN F K +PIMVVMKAMG+ESDQEVVQMVGRDP Y A+LLPSI+ECA   I+ Q+QAL
Sbjct: 241  LLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQAL 300

Query: 2601 EYLDNKVKKFAFSNV--NQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
            EYL+ KVK+  ++     +EGRALSILRDVFLANVPVR  +FRPKC+Y AVMLRRM++AI
Sbjct: 301  EYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAI 360

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTK-NLARSFDNSN 2251
            LNKDA+DDKDYVGNKRLELSGQLISLLFEDLFKT   EV+K +DL L+K + + + D S 
Sbjct: 361  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQ 420

Query: 2250 YL-TRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKSR 2074
            +L +R++IT GLER LSTGN+D+KRFKMHRKGMTQVLARLSFI ++G+MTKVSPQFEKSR
Sbjct: 421  FLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSR 480

Query: 2073 KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEGL 1894
            KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDE+EGPLISLC+ LGVE L
Sbjct: 481  KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDL 540

Query: 1893 ELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRCV 1714
            ELLS EELHTPNSFLVI NGLILGKHR+PQ FA  MRKLRRAGK+GEFVSV+VN+KQRCV
Sbjct: 541  ELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCV 600

Query: 1713 YIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNALI 1534
            YIASDGGRVCRPLVIADKG+SRIKEHHM+E+ DGVRTF+DFLR+GLIEYLDVNE+NNALI
Sbjct: 601  YIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALI 660

Query: 1533 ALYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLS 1354
            ALYEGE     THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL 
Sbjct: 661  ALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLC 720

Query: 1353 RMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 1174
            RMD+LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD
Sbjct: 721  RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 780

Query: 1173 RGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYDI 994
            RGFGRCIV+K+  A+ QKY     DRI RP R G    +M++LD+DGIA PGEIIRP DI
Sbjct: 781  RGFGRCIVMKRYSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDI 840

Query: 993  YVNKEVPMNTK------DNSQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIKFQ 832
            Y+NKE  ++T+      ++  +  ++P+ QTYKG +GE  V+DRVAL +D N+NL IKF 
Sbjct: 841  YINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFL 900

Query: 831  IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMI 652
            IRHTRRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMI
Sbjct: 901  IRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 960

Query: 651  ELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSPLQ 472
            ELLGGKAGVSCGRFHYGSAFGEPSGHAD VEAIS+TL++ GFSYNGKDF+YSGITG PLQ
Sbjct: 961  ELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQ 1020

Query: 471  AYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYG 292
            AYIFMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYG
Sbjct: 1021 AYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1080

Query: 291  ASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACKLL 112
            ASMLI+ERLMISSDPFEVQVCR CGLLGYY+HKLKTGICSSCKNG+N+S MKLPYACKLL
Sbjct: 1081 ASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLL 1140

Query: 111  FQELQSMNIVPRLKLTEA 58
             QELQSMNIVPRLKL+EA
Sbjct: 1141 IQELQSMNIVPRLKLSEA 1158


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1674 bits (4335), Expect = 0.0
 Identities = 838/1036 (80%), Positives = 926/1036 (89%), Gaps = 8/1036 (0%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPILVDI Y +    ++  ++K +V+IGRMP+MLRS  CVL GKDEAELARLGECPLD
Sbjct: 123  YAAPILVDIEYIEESHAQKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLD 182

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYFI+KGTEKV+LIQEQLSKNRIII+TDKKG++ ASVTSSTEATKSKTVI M+ EKI+
Sbjct: 183  PGGYFIIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIY 242

Query: 2781 LQLNAFPKP-VPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQA 2605
            LQLN F  P +PIMVV+KAMG+ES QEVVQMVGRDPRY ALLLPSI+ECA E I+ Q+QA
Sbjct: 243  LQLNIFTTPKIPIMVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQA 302

Query: 2604 LEYLDNKVKKFAFSNV--NQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDA 2431
            LEYL+ KVKKF F++    +EGRAL ILRDVFLANVPV + +F PKCIY AVM+RRMMDA
Sbjct: 303  LEYLETKVKKFQFASAPPEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDA 362

Query: 2430 ILNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTKNLARS-FDNS 2254
            IL+KDA+DDKDYVGNKRLELSGQLISLLFEDLFKTM  EVKK +D  L K+   S FD S
Sbjct: 363  ILSKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFS 422

Query: 2253 NYLTRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKSR 2074
             +L  + I+ GLER LSTGNWD+KRF+MHRKGM+QVLARLSFI+++GH+T+VSPQFEKSR
Sbjct: 423  QHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSR 482

Query: 2073 KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEGL 1894
            KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD+EEGPLISLC+ LGVE L
Sbjct: 483  KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDL 542

Query: 1893 ELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRCV 1714
            ELLSAEELHTPNSFLVIFNG ILGKHR+PQ FA  MR LRRAGKIGEFVSV+VN+KQ CV
Sbjct: 543  ELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCV 602

Query: 1713 YIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNALI 1534
            YIASDGGRVCRPLVIADKG+SRIKE+HM+E+ DGVRTF+DFLR+GLIEYLDVNE+NNALI
Sbjct: 603  YIASDGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALI 662

Query: 1533 ALYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLS 1354
            ALYEGE     THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL 
Sbjct: 663  ALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLR 722

Query: 1353 RMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 1174
            RMD+LLYLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD
Sbjct: 723  RMDTLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 782

Query: 1173 RGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYDI 994
            RGFGRCIV KK  ++ QKY NNT DRI RP+R       M++LD+DG+AAPGEIIRP DI
Sbjct: 783  RGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDI 842

Query: 993  YVNKEVPMNTKDNS----QNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIKFQIR 826
            YVNK+ P+  K +      +  ++P  Q +KG++GE  V+DRVALS+D N+ LCIKF IR
Sbjct: 843  YVNKQSPIIMKGSPLPGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIR 902

Query: 825  HTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIEL 646
             TRRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIEL
Sbjct: 903  QTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIEL 962

Query: 645  LGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSPLQAY 466
            LGGKAGVSCGRFHYGSAFGEPSGHAD V+AIS+TL+++GFSYNGKDFLYSGITG PLQAY
Sbjct: 963  LGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAY 1022

Query: 465  IFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGAS 286
            IFMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGAS
Sbjct: 1023 IFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGAS 1082

Query: 285  MLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACKLLFQ 106
            MLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNG+NIS MKLPYACKLL Q
Sbjct: 1083 MLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQ 1142

Query: 105  ELQSMNIVPRLKLTEA 58
            ELQSMNIVPRLKL EA
Sbjct: 1143 ELQSMNIVPRLKLAEA 1158


>ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
            gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase
            isoform 7 [Theobroma cacao]
          Length = 1082

 Score = 1662 bits (4304), Expect = 0.0
 Identities = 831/1061 (78%), Positives = 928/1061 (87%), Gaps = 33/1061 (3%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI V+I Y +G   ++   +K +++IGRMP+MLRSC CVL GKDEAELARLGECPLD
Sbjct: 22   YAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLD 81

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KG EKVILIQEQLSKNRIII+ DKKG++ ASVTSS+EATKSKTVI M+KEKI+
Sbjct: 82   PGGYFVIKGAEKVILIQEQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIY 141

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L LN F K +PIMVVMKAMG+ESDQEVVQMVGRDP Y A+LLPSI+ECA   I+ Q+QAL
Sbjct: 142  LLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQAL 201

Query: 2601 EYLDNKVKKFAFSNV--NQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
            EYL+ KVK+  ++     +EGRALSILRDVFLANVPVR  +FRPKC+Y AVMLRRM++AI
Sbjct: 202  EYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAI 261

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTK-NLARSFDNSN 2251
            LNKDA+DDKDYVGNKRLELSGQLISLLFEDLFKT   EV+K +DL L+K + + + D S 
Sbjct: 262  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQ 321

Query: 2250 YL-TRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKSR 2074
            +L +R++IT GLER LSTGN+D+KRFKMHRKGMTQVLARLSFI ++G+MTKVSPQFEKSR
Sbjct: 322  FLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSR 381

Query: 2073 KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEGL 1894
            KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDE+EGPLISLC+ LGVE L
Sbjct: 382  KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDL 441

Query: 1893 ELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRCV 1714
            ELLS EELHTPNSFLVI NGLILGKHR+PQ FA  MRKLRRAGK+GEFVSV+VN+KQRCV
Sbjct: 442  ELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCV 501

Query: 1713 YIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNALI 1534
            YIASDGGRVCRPLVIADKG+SRIKEHHM+E+ DGVRTF+DFLR+GLIEYLDVNE+NNALI
Sbjct: 502  YIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALI 561

Query: 1533 ALYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLS 1354
            ALYEGE     THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL 
Sbjct: 562  ALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLC 621

Query: 1353 RMDSLLYLLVYPQRPLLTTRTIEL-----------------------VGYDKLGAGQNAT 1243
            RMD+LLYLLVYPQRPLLTTRTIEL                       VGYDKLGAGQNAT
Sbjct: 622  RMDTLLYLLVYPQRPLLTTRTIELVSGLYVVDYSTPFCPVNCLLCFQVGYDKLGAGQNAT 681

Query: 1242 VAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDH 1063
            VAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+K+  A+ QKY     DRI RP R G   
Sbjct: 682  VAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKRYSAVNQKYETGASDRILRPQRTGPGS 741

Query: 1062 HKMKVLDEDGIAAPGEIIRPYDIYVNKEVPMNTK------DNSQNIQFKPSYQTYKGAKG 901
             +M++LD+DGIA PGEIIRP DIY+NKE  ++T+      ++  +  ++P+ QTYKG +G
Sbjct: 742  ERMQILDDDGIATPGEIIRPNDIYINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEG 801

Query: 900  ERAVIDRVALSSDVNNNLCIKFQIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSER 721
            E  V+DRVAL +D N+NL IKF IRHTRRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSER
Sbjct: 802  ESCVVDRVALCTDRNSNLSIKFLIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSER 861

Query: 720  GICPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTL 541
            GICPDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRFHYGSAFGEPSGHAD VEAIS+TL
Sbjct: 862  GICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETL 921

Query: 540  VEKGFSYNGKDFLYSGITGSPLQAYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPT 361
            ++ GFSYNGKDF+YSGITG PLQAYIFMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPT
Sbjct: 922  IKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPT 981

Query: 360  EGRSRDGGLRLGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTG 181
            EGR+R+GGLR+GEMERDCLIAYGASMLI+ERLMISSDPFEVQVCR CGLLGYY+HKLKTG
Sbjct: 982  EGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTG 1041

Query: 180  ICSSCKNGENISKMKLPYACKLLFQELQSMNIVPRLKLTEA 58
            ICSSCKNG+N+S MKLPYACKLL QELQSMNIVPRLKL+EA
Sbjct: 1042 ICSSCKNGDNVSTMKLPYACKLLIQELQSMNIVPRLKLSEA 1082


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 1153

 Score = 1661 bits (4301), Expect = 0.0
 Identities = 826/1038 (79%), Positives = 923/1038 (88%), Gaps = 10/1038 (0%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI V+I Y +G   ++   +K +++IGRMP+MLRSC CVL GKDEAELARLGECPLD
Sbjct: 121  YAAPIFVNIEYIQGSHGQKTRLEKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLD 180

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KG EK     EQLSKNRIII+ DKKG++ ASVTSS+EATKSKTVI M+KEKI+
Sbjct: 181  PGGYFVIKGAEK-----EQLSKNRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIY 235

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L LN F K +PIMVVMKAMG+ESDQEVVQMVGRDP Y A+LLPSI+ECA   I+ Q+QAL
Sbjct: 236  LLLNQFVKKIPIMVVMKAMGMESDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQAL 295

Query: 2601 EYLDNKVKKFAFSNV--NQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
            EYL+ KVK+  ++     +EGRALSILRDVFLANVPVR  +FRPKC+Y AVMLRRM++AI
Sbjct: 296  EYLETKVKRVMYTGPASEKEGRALSILRDVFLANVPVRSNNFRPKCLYVAVMLRRMVEAI 355

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTK-NLARSFDNSN 2251
            LNKDA+DDKDYVGNKRLELSGQLISLLFEDLFKT   EV+K +DL L+K + + + D S 
Sbjct: 356  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTTISEVQKMIDLVLSKPSRSSALDPSQ 415

Query: 2250 YL-TRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKSR 2074
            +L +R++IT GLER LSTGN+D+KRFKMHRKGMTQVLARLSFI ++G+MTKVSPQFEKSR
Sbjct: 416  FLRSRETITFGLERTLSTGNFDIKRFKMHRKGMTQVLARLSFIGTLGYMTKVSPQFEKSR 475

Query: 2073 KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEGL 1894
            KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDE+EGPLISLC+ LGVE L
Sbjct: 476  KVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEDEGPLISLCYCLGVEDL 535

Query: 1893 ELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRCV 1714
            ELLS EELHTPNSFLVI NGLILGKHR+PQ FA  MRKLRRAGK+GEFVSV+VN+KQRCV
Sbjct: 536  ELLSGEELHTPNSFLVILNGLILGKHRRPQHFAVAMRKLRRAGKVGEFVSVFVNEKQRCV 595

Query: 1713 YIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNALI 1534
            YIASDGGRVCRPLVIADKG+SRIKEHHM+E+ DGVRTF+DFLR+GLIEYLDVNE+NNALI
Sbjct: 596  YIASDGGRVCRPLVIADKGVSRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEENNALI 655

Query: 1533 ALYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLS 1354
            ALYEGE     THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL 
Sbjct: 656  ALYEGEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLC 715

Query: 1353 RMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 1174
            RMD+LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD
Sbjct: 716  RMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLD 775

Query: 1173 RGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYDI 994
            RGFGRCIV+K+  A+ QKY     DRI RP R G    +M++LD+DGIA PGEIIRP DI
Sbjct: 776  RGFGRCIVMKRYSAVNQKYETGASDRILRPQRTGPGSERMQILDDDGIATPGEIIRPNDI 835

Query: 993  YVNKEVPMNTK------DNSQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIKFQ 832
            Y+NKE  ++T+      ++  +  ++P+ QTYKG +GE  V+DRVAL +D N+NL IKF 
Sbjct: 836  YINKESSIHTRGSRVSSESLPDSAYRPARQTYKGPEGESCVVDRVALCTDRNSNLSIKFL 895

Query: 831  IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMI 652
            IRHTRRPEVGDKFSSRHGQKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMT+GKMI
Sbjct: 896  IRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMI 955

Query: 651  ELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSPLQ 472
            ELLGGKAGVSCGRFHYGSAFGEPSGHAD VEAIS+TL++ GFSYNGKDF+YSGITG PLQ
Sbjct: 956  ELLGGKAGVSCGRFHYGSAFGEPSGHADRVEAISETLIKHGFSYNGKDFIYSGITGCPLQ 1015

Query: 471  AYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYG 292
            AYIFMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYG
Sbjct: 1016 AYIFMGPIYYQKLKHMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYG 1075

Query: 291  ASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACKLL 112
            ASMLI+ERLMISSDPFEVQVCR CGLLGYY+HKLKTGICSSCKNG+N+S MKLPYACKLL
Sbjct: 1076 ASMLIFERLMISSDPFEVQVCRKCGLLGYYSHKLKTGICSSCKNGDNVSTMKLPYACKLL 1135

Query: 111  FQELQSMNIVPRLKLTEA 58
             QELQSMNIVPRLKL+EA
Sbjct: 1136 IQELQSMNIVPRLKLSEA 1153


>ref|XP_006362214.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like isoform
            X1 [Solanum tuberosum] gi|565393087|ref|XP_006362215.1|
            PREDICTED: DNA-directed RNA polymerase III subunit
            RPC2-like isoform X2 [Solanum tuberosum]
          Length = 1153

 Score = 1654 bits (4283), Expect = 0.0
 Identities = 818/1039 (78%), Positives = 910/1039 (87%), Gaps = 11/1039 (1%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI V I YT G   +  +  K NVIIGRMP+MLRS  CVL GKDE ELARLGECPLD
Sbjct: 115  YAAPIYVTIEYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLD 174

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KGTEKVILIQEQLSKNRIII+TDKKG + ASVTSSTE TKSKT+I M+KEK++
Sbjct: 175  PGGYFVIKGTEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVY 234

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L+LN F   VPIMVVMKAMG+ESDQEVVQM+GRDPR++ALLLPSI+ECA   ++ Q QAL
Sbjct: 235  LELNMFKTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQHQAL 294

Query: 2601 EYLDN----KVKKFAFSNVNQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMD 2434
            E+L++    K+  ++   V +  RALSILRD+FLANVPV + +FR KCIY AVM+RRMM+
Sbjct: 295  EFLESDKMLKMPSYSTGPVEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMME 354

Query: 2433 AILNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTKNLARS-FDN 2257
            AILNKDA+DDKDYVGNKRLELSGQL+SLLFEDLFKTMN E ++ +D  L +    S  D 
Sbjct: 355  AILNKDAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDI 414

Query: 2256 SNYLTRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKS 2077
            S Y+ +DSIT GLER LSTGNWD+KRF+MHRKGMTQV+ARLS+I S+GHMTK+SPQFEKS
Sbjct: 415  SQYIVKDSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKS 474

Query: 2076 RKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEG 1897
            RKVSGPRALQPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDE+E P++SLC+ LGVE 
Sbjct: 475  RKVSGPRALQPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVED 534

Query: 1896 LELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRC 1717
            LE LS EELH P S+L+  NGLILGKH+ PQRFA  MR+LRRAGKIGEFVS++VN+KQRC
Sbjct: 535  LEQLSPEELHMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKIGEFVSIFVNEKQRC 594

Query: 1716 VYIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNAL 1537
            VYIASDGGRVCRPLVIADKG+SRIKEHHM+E+RDGVR F+ FL++GLIEYLDVNE+NN L
Sbjct: 595  VYIASDGGRVCRPLVIADKGVSRIKEHHMRELRDGVRDFDSFLKDGLIEYLDVNEENNTL 654

Query: 1536 IALYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL 1357
            IALYE E     THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL
Sbjct: 655  IALYEKEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL 714

Query: 1356 SRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSL 1177
            +RMD LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSL
Sbjct: 715  NRMDGLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSL 774

Query: 1176 DRGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYD 997
            DRGFGRCIV+KK  AI QKY N T DRI +P R+G +  KM++LD+DG+AAPGE IR +D
Sbjct: 775  DRGFGRCIVMKKYSAICQKYENGTSDRIIKPQRQGFEADKMQILDDDGMAAPGETIRNHD 834

Query: 996  IYVNKEVPMNTKD------NSQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIKF 835
            IY+NKE P  T+          +  +K S QTYKG +GE AV+DRVAL SD NNNL IKF
Sbjct: 835  IYINKESPTVTRTPITSPMGLPDSAYKTSRQTYKGPEGETAVVDRVALYSDRNNNLSIKF 894

Query: 834  QIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKM 655
             IRHTRRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKM
Sbjct: 895  MIRHTRRPEIGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKM 954

Query: 654  IELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSPL 475
            IELLG KAGVSCGRFHYGSAFGEPSGHADTV++IS+TLV+ GFSYNGKDF+YSGITG PL
Sbjct: 955  IELLGSKAGVSCGRFHYGSAFGEPSGHADTVDSISETLVKHGFSYNGKDFIYSGITGMPL 1014

Query: 474  QAYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAY 295
            QAYIFMGPIYYQKLKHMVLDKMHARG GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAY
Sbjct: 1015 QAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAY 1074

Query: 294  GASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACKL 115
            GASMLIYERLMISSDPFEVQVCR CGLLGYYN+KLKTGICS CKNGENIS MKLPYACKL
Sbjct: 1075 GASMLIYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKL 1134

Query: 114  LFQELQSMNIVPRLKLTEA 58
            LFQELQSMNIVPRLKL EA
Sbjct: 1135 LFQELQSMNIVPRLKLAEA 1153


>ref|XP_004249732.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Solanum
            lycopersicum]
          Length = 1183

 Score = 1651 bits (4276), Expect = 0.0
 Identities = 815/1039 (78%), Positives = 911/1039 (87%), Gaps = 11/1039 (1%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI V I YT G   +  +  K NVIIGRMP+MLRS  CVL GKDE ELARLGECPLD
Sbjct: 145  YAAPIYVTIDYTTGSHGQTSVSTKKNVIIGRMPIMLRSSCCVLYGKDEDELARLGECPLD 204

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KGTEKVILIQEQLSKNRIII+TDKKG + ASVTSSTE TKSKT+I M+KEK++
Sbjct: 205  PGGYFVIKGTEKVILIQEQLSKNRIIIDTDKKGSVQASVTSSTEKTKSKTIIKMEKEKVY 264

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L+LN F   VPIMVVMKAMG+ESDQEVVQM+GRDPR++ALLLPSI+ECA   ++ QQQAL
Sbjct: 265  LELNMFKTKVPIMVVMKAMGMESDQEVVQMIGRDPRFSALLLPSIEECADLKLYTQQQAL 324

Query: 2601 EYLDN----KVKKFAFSNVNQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMD 2434
            E+L++    K+  ++   + +  RALSILRD+FLANVPV + +FR KCIY AVM+RRMM+
Sbjct: 325  EFLESDKMLKMPSYSTGPIEKGARALSILRDIFLANVPVHQHNFRKKCIYVAVMMRRMME 384

Query: 2433 AILNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTKNLARS-FDN 2257
            AILNKDA+DDKDYVGNKRLELSGQL+SLLFEDLFKTMN E ++ +D  L +    S  D 
Sbjct: 385  AILNKDAMDDKDYVGNKRLELSGQLLSLLFEDLFKTMNDEARRTIDTLLARPSRSSRLDI 444

Query: 2256 SNYLTRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKS 2077
            S Y+ +DSIT GLER LSTGNWD+KRF+MHRKGMTQV+ARLS+I S+GHMTK+SPQFEKS
Sbjct: 445  SQYIIKDSITMGLERTLSTGNWDVKRFRMHRKGMTQVVARLSYIGSLGHMTKISPQFEKS 504

Query: 2076 RKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEG 1897
            RKVSGPRALQPSQ+GMLCPCDTPEGEACGLVKNLALMTHVTTDE+E P++SLC+ LGVE 
Sbjct: 505  RKVSGPRALQPSQFGMLCPCDTPEGEACGLVKNLALMTHVTTDEDERPIMSLCYCLGVED 564

Query: 1896 LELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRC 1717
            LE LS EELH P S+L+  NGLILGKH+ PQRFA  MR+LRRAGK+GEFVS++VN+KQRC
Sbjct: 565  LEQLSPEELHMPTSYLITLNGLILGKHKSPQRFANAMRRLRRAGKVGEFVSIFVNEKQRC 624

Query: 1716 VYIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNAL 1537
            VYIASDGGRVCRPLVIADKG+SRIKEHHM+E+RDG+R F+ FL++GLIEYLDVNE+NN L
Sbjct: 625  VYIASDGGRVCRPLVIADKGVSRIKEHHMRELRDGLRDFDSFLKDGLIEYLDVNEENNTL 684

Query: 1536 IALYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL 1357
            IALYE E     THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL
Sbjct: 685  IALYEKEATPETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL 744

Query: 1356 SRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSL 1177
            +RMD LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSL
Sbjct: 745  NRMDGLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSL 804

Query: 1176 DRGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYD 997
            DRGFGRCIV+KK  AI QKY N T DRI +P R+G +  +M++LD+DG+AAPGE IR +D
Sbjct: 805  DRGFGRCIVMKKYSAICQKYENGTSDRIIKPQRQGPEADRMQILDDDGMAAPGETIRNHD 864

Query: 996  IYVNKEVPMNTKD------NSQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIKF 835
            IY+NKE P  T+          +  +K S QTYKG +GE AV+DRVAL SD NNNL IKF
Sbjct: 865  IYINKESPTVTRTPVTSPMGLPDSAYKSSKQTYKGPEGETAVVDRVALYSDRNNNLSIKF 924

Query: 834  QIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKM 655
             IRHTRRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKM
Sbjct: 925  MIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKM 984

Query: 654  IELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSPL 475
            IELLG KAGVSCGRFHYGSAFGEPSGHADTV+AIS+TLV+ GFSYNGKDF+YSGITG PL
Sbjct: 985  IELLGSKAGVSCGRFHYGSAFGEPSGHADTVDAISETLVKHGFSYNGKDFIYSGITGMPL 1044

Query: 474  QAYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAY 295
            QAYIFMGPIYYQKLKHMV+DKMHARG GPRVM+TRQPTEGRSR+GGLR+GEMERDCLIAY
Sbjct: 1045 QAYIFMGPIYYQKLKHMVVDKMHARGSGPRVMMTRQPTEGRSRNGGLRVGEMERDCLIAY 1104

Query: 294  GASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACKL 115
            GASMLIYERLMISSDPFEVQVCR CGLLGYYN+KLKTGICS CKNGENIS MKLPYACKL
Sbjct: 1105 GASMLIYERLMISSDPFEVQVCRKCGLLGYYNYKLKTGICSMCKNGENISTMKLPYACKL 1164

Query: 114  LFQELQSMNIVPRLKLTEA 58
            LFQELQSMNIVPRLKL EA
Sbjct: 1165 LFQELQSMNIVPRLKLAEA 1183


>ref|XP_006583557.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1165

 Score = 1640 bits (4246), Expect = 0.0
 Identities = 812/1040 (78%), Positives = 917/1040 (88%), Gaps = 12/1040 (1%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI  D+ YT G  ++ +IK+K+ V IGRMP+MLRSC CVL G+DEAELA+LGECPLD
Sbjct: 128  YAAPICADVEYTLGSHDKPDIKRKLKVEIGRMPIMLRSCCCVLHGRDEAELAKLGECPLD 187

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KGTEKVILIQEQLSKNRIII+TDKKG++ ASVTSSTE  K+KTV++M+KEK++
Sbjct: 188  PGGYFVIKGTEKVILIQEQLSKNRIIIDTDKKGNITASVTSSTEKIKTKTVVVMEKEKLW 247

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            LQLN FPK VP+MVVMKAMG+ESDQEV QMVGRDPRY+ LLLPSI+EC    ++ ++QAL
Sbjct: 248  LQLNKFPKKVPLMVVMKAMGMESDQEVTQMVGRDPRYSFLLLPSIEECTKCKVYTREQAL 307

Query: 2601 EYLDNKVKKFAFSN--VNQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
            EYLD  VK+  +SN    +EG A S LRDVFLANVPV + +FRPKCIY AVM+RR+MDAI
Sbjct: 308  EYLDKLVKRPTYSNNAAEKEGAAFSALRDVFLANVPVDQDNFRPKCIYVAVMMRRIMDAI 367

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTK-NLARSFDNSN 2251
            LNKDA+DDKDYVGNKRLELSGQLISLLFEDLFK+M  EVK   D  L K + A++FD   
Sbjct: 368  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKSMTTEVKNLTDKMLEKPDKAKNFDICT 427

Query: 2250 YLTRDS--ITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKS 2077
             LTR    IT GLER LSTGN+++KRF+M RKGMTQVL RLSFI ++GHMT+VSPQFEKS
Sbjct: 428  LLTRTRSIITLGLERTLSTGNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKS 487

Query: 2076 RKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEG 1897
            RKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEEE PLISLC SLGVE 
Sbjct: 488  RKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEKPLISLCESLGVED 547

Query: 1896 LELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRC 1717
            ++ LSAEELHTP+SFLVIFNGLILGKHR+P  FA  +RKLRRAGKIGEFVSVYVN+KQ C
Sbjct: 548  MKDLSAEELHTPDSFLVIFNGLILGKHRRPLHFATAIRKLRRAGKIGEFVSVYVNEKQHC 607

Query: 1716 VYIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNAL 1537
            VY+ASDGGRVCRPLVIADKGISRIK+HHM+E+ DGVRTF+DFLR+GL+EYLDVNE+NNAL
Sbjct: 608  VYLASDGGRVCRPLVIADKGISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNAL 667

Query: 1536 IALYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL 1357
            IALYEG+     THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL
Sbjct: 668  IALYEGDATSETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQL 727

Query: 1356 SRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSL 1177
             RMDSLLYLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SL
Sbjct: 728  RRMDSLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASL 787

Query: 1176 DRGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYD 997
            DRGFGRCIV+KK  AI+QK+ N+T DRI RP+R      +M++LD+DGIAAPGEI+RPYD
Sbjct: 788  DRGFGRCIVMKKYNAIIQKHSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYD 847

Query: 996  IYVNKEVPMNTKD-------NSQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIK 838
            IY+NK+ P++T+        N  +  ++ + Q++KG  GE  V+DRV L SD +NN+CIK
Sbjct: 848  IYINKQSPIDTRTPKTGSAANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIK 905

Query: 837  FQIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGK 658
            F IRHTRRPE+GDKFSSRHGQKGVCGTIV QEDFPFSE+GICPDLIMNPHGFPSRMT+GK
Sbjct: 906  FLIRHTRRPELGDKFSSRHGQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGK 965

Query: 657  MIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSP 478
            MIELLGGKAGVSCGRFHYGSAFGE SGHAD VE IS+TLV KGF+Y+GKDF+YSGITG P
Sbjct: 966  MIELLGGKAGVSCGRFHYGSAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCP 1025

Query: 477  LQAYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIA 298
            LQAYIFMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIA
Sbjct: 1026 LQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIA 1085

Query: 297  YGASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACK 118
            YGASMLIYERLM+SSDPFEVQVC  CGLLGYYNHKLKTGICSSCKNG+NIS MKLPYACK
Sbjct: 1086 YGASMLIYERLMLSSDPFEVQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACK 1145

Query: 117  LLFQELQSMNIVPRLKLTEA 58
            L+ QELQSMNIVPRLKL +A
Sbjct: 1146 LMIQELQSMNIVPRLKLADA 1165


>ref|XP_007152964.1| hypothetical protein PHAVU_004G175000g [Phaseolus vulgaris]
            gi|561026273|gb|ESW24958.1| hypothetical protein
            PHAVU_004G175000g [Phaseolus vulgaris]
          Length = 1161

 Score = 1631 bits (4224), Expect = 0.0
 Identities = 805/1040 (77%), Positives = 916/1040 (88%), Gaps = 12/1040 (1%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI VD+ YT G ++   + +++NV IGRMP+MLRSC CVL G+D+AELA+LGECPLD
Sbjct: 124  YAAPICVDVEYTHGSRDDPRLHKRLNVEIGRMPIMLRSCCCVLYGRDQAELAKLGECPLD 183

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF+VKGTEKVILIQEQLSKNRIII+TDKKG++ ASVTSSTE  K+KT+I+M+ EK++
Sbjct: 184  PGGYFVVKGTEKVILIQEQLSKNRIIIDTDKKGNIAASVTSSTEKIKTKTIIVMENEKLW 243

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L LN FPK VP+M VMKAMGIESDQEV QMVGRDPRY+ LLLPS +EC   N++ Q+QAL
Sbjct: 244  LHLNQFPKKVPLMAVMKAMGIESDQEVTQMVGRDPRYSFLLLPSFEECRKCNVYTQEQAL 303

Query: 2601 EYLDNKVKKFAFSN--VNQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
            EYLD  VK+  +S+    +EGRA S+LRDVFLANVPV   +FRPKCIY AVM+RR+MDAI
Sbjct: 304  EYLDKMVKRSMYSSNSAEKEGRAFSVLRDVFLANVPVDGDNFRPKCIYVAVMMRRIMDAI 363

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTK-NLARSFDNSN 2251
            LNKDA+DDKDYVGNKRLELSGQLISLLFEDLFK+M  EVK   D  L K + AR+FD S 
Sbjct: 364  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKSMATEVKNLTDKMLDKPDKARNFDIST 423

Query: 2250 YL--TRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKS 2077
             L  T++ IT GLER LSTGN+++KRF+M RKGMTQVL RLSFI ++GHMT+VSPQFEKS
Sbjct: 424  LLNRTQNIITLGLERTLSTGNFEIKRFRMERKGMTQVLQRLSFIGAMGHMTRVSPQFEKS 483

Query: 2076 RKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEG 1897
            RKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEEE PLIS+C+SLGVE 
Sbjct: 484  RKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEESPLISMCYSLGVED 543

Query: 1896 LELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRC 1717
            LELLSAEELHTP+SFLVI NGLILGKH++P RFA  +RKLRR GKIGEFVSV+V++KQ C
Sbjct: 544  LELLSAEELHTPDSFLVILNGLILGKHKRPLRFATAIRKLRRRGKIGEFVSVFVHEKQNC 603

Query: 1716 VYIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNAL 1537
            VY+ASDGGRVCRPLVIADKGISRIK+HHM+E+ DGVRTF+DFLR+GL+EYLDVNE+NN L
Sbjct: 604  VYLASDGGRVCRPLVIADKGISRIKQHHMKELMDGVRTFDDFLRDGLLEYLDVNEENNTL 663

Query: 1536 IALYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL 1357
            IALYEG+     THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL
Sbjct: 664  IALYEGDATSETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQL 723

Query: 1356 SRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSL 1177
             RMDSLLYLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SL
Sbjct: 724  RRMDSLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASL 783

Query: 1176 DRGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYD 997
            DRGFGRCIV+KK  A++QK+ N+T DRI RP+R      +M++LD+DGIAAPGEI++P+D
Sbjct: 784  DRGFGRCIVMKKYSAVIQKHSNDTSDRILRPNRAADTAGRMRILDDDGIAAPGEILKPFD 843

Query: 996  IYVNKEVPMNTK-------DNSQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIK 838
            IY+NK+ P++T+        N  +  ++ + Q++KG  GE  V+DRV L SD + N+CIK
Sbjct: 844  IYINKQSPIDTRTPRTGAAGNLPDSAYRSNSQSFKGHGGE--VVDRVVLCSDKDKNMCIK 901

Query: 837  FQIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGK 658
            F IRHTRRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSE+GICPDLIMNPHGFPSRMT+GK
Sbjct: 902  FLIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSEKGICPDLIMNPHGFPSRMTVGK 961

Query: 657  MIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSP 478
            MIELLGGKAGVSCGRFHYGSAFGE SGHAD VEAIS+TLV KGFSY+GKDF+YSGITG P
Sbjct: 962  MIELLGGKAGVSCGRFHYGSAFGERSGHADKVEAISETLVSKGFSYSGKDFIYSGITGCP 1021

Query: 477  LQAYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIA 298
            LQAYIFMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIA
Sbjct: 1022 LQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIA 1081

Query: 297  YGASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACK 118
            YGASMLIYERLM+SSDPFEVQVC  CGLLGYYNHKLKTGICS CKNG+ IS MKLPYACK
Sbjct: 1082 YGASMLIYERLMLSSDPFEVQVCTACGLLGYYNHKLKTGICSYCKNGDKISTMKLPYACK 1141

Query: 117  LLFQELQSMNIVPRLKLTEA 58
            L+ QELQSMNIVPRLKL +A
Sbjct: 1142 LMIQELQSMNIVPRLKLADA 1161


>ref|XP_006279912.1| hypothetical protein CARUB_v10025768mg [Capsella rubella]
            gi|482548616|gb|EOA12810.1| hypothetical protein
            CARUB_v10025768mg [Capsella rubella]
          Length = 1160

 Score = 1618 bits (4191), Expect = 0.0
 Identities = 794/1047 (75%), Positives = 917/1047 (87%), Gaps = 19/1047 (1%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI V+I Y  G    ++   K NV+IGRMP+MLRSCRCVL GKDE ELARLGECPLD
Sbjct: 114  YAAPIHVNIEYVHGSHGEKQTSAKNNVLIGRMPIMLRSCRCVLNGKDEDELARLGECPLD 173

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KGTEKV+LIQEQLSKNRIII++DKKG++ ASVTSSTE TKSKTVI M+KE+I+
Sbjct: 174  PGGYFVIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKERIY 233

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L L+ F K +PI++V+KAMG+ESDQE+VQMVGRDPR++A LLPSI+EC +E +  Q+QAL
Sbjct: 234  LFLHQFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQAL 293

Query: 2601 EYLDNKVKKFAFSN-VNQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAIL 2425
            +YL+ KVKK ++   + ++GRAL ILRD+FLA+VPVR+ +FR KC Y  VMLRRM++A+L
Sbjct: 294  DYLEAKVKKTSYGPPLQKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAML 353

Query: 2424 NKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTK-NLARSFDNSNY 2248
            NKDA+DDKDYVGNKRLELSGQLISLLFEDLFKTM  E  K++D+ LTK N A  FD S  
Sbjct: 354  NKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEAIKKVDVILTKQNRASRFDFSQC 413

Query: 2247 LTRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKSRKV 2068
            L+ D I+ GLER LSTGN+D+KRF+MHRKGMTQVL RLSFI S+G +TK+SPQFEKSRKV
Sbjct: 414  LSGDIISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKV 473

Query: 2067 SGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEGLEL 1888
            SGPR+LQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEEEGPL+++C+ LGV  LE+
Sbjct: 474  SGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEV 533

Query: 1887 LSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRCVYI 1708
            LSAEELHTP+SFLVI NGLILGKHR+PQ FA ++R+LRRAGKIGEFVSV+ N+KQ CVY+
Sbjct: 534  LSAEELHTPDSFLVILNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYV 593

Query: 1707 ASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNALIAL 1528
            ASDGGRVCRPLVIADKGISR+K+HHM+E++DGVRTF+DF+R+GLIEYLDVNE+NNALIAL
Sbjct: 594  ASDGGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIAL 653

Query: 1527 YEGEPKEHI-------------THIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQ 1387
            YE +    +             THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQ
Sbjct: 654  YESDATTELDEGGEAAKIRADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQ 713

Query: 1386 AMGNIAYNQLSRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIE 1207
            AMGNIAYNQL+RMD+LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIE
Sbjct: 714  AMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIE 773

Query: 1206 DAIVMNKSSLDRGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIA 1027
            DAIVMNKSSLDRGFGRCIV+KK VA  QKY NNTQDRI RP R G D  KM++LD DGIA
Sbjct: 774  DAIVMNKSSLDRGFGRCIVMKKIVATSQKYDNNTQDRILRPQRTGPDAEKMQILDNDGIA 833

Query: 1026 APGEIIRPYDIYVNKEVPMNTKDNS----QNIQFKPSYQTYKGAKGERAVIDRVALSSDV 859
            +PGEIIRP D+Y+NK+ P++TK+       + Q++P+ + +KG +GE  V+DRVAL S+ 
Sbjct: 834  SPGEIIRPNDVYINKQSPVDTKNKMTTQLSDSQYRPAREYFKGPEGETQVVDRVALCSNK 893

Query: 858  NNNLCIKFQIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFP 679
            +++LCIK+ IRHTRRPE+GDKFSSRHGQKGVCGTI+QQEDFPFSE GICPDLIMNPHGFP
Sbjct: 894  HDHLCIKYIIRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFP 953

Query: 678  SRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLY 499
            SRMT+GKMIELLG KAGVSCGRFHYGSAFGE  GHAD VE IS TLV KGFSY+GKD LY
Sbjct: 954  SRMTVGKMIELLGSKAGVSCGRFHYGSAFGERGGHADKVETISATLVNKGFSYSGKDLLY 1013

Query: 498  SGITGSPLQAYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEM 319
            SGI+G PLQAYIFMGPIYYQKLKHMVLDKMHARG GPRVM+TRQPTEG+S++GGLR+GEM
Sbjct: 1014 SGISGEPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEM 1073

Query: 318  ERDCLIAYGASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKM 139
            ERDCLIAYGASMLIYERLM+SSDPFEVQVCR CGLLGYY++KLK   CS+CKNG+NI+ M
Sbjct: 1074 ERDCLIAYGASMLIYERLMVSSDPFEVQVCRACGLLGYYSYKLKKAFCSTCKNGDNIATM 1133

Query: 138  KLPYACKLLFQELQSMNIVPRLKLTEA 58
            KLPYACKLLFQELQSMN+VPRLKL EA
Sbjct: 1134 KLPYACKLLFQELQSMNVVPRLKLIEA 1160


>ref|XP_004308665.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
            [Fragaria vesca subsp. vesca]
          Length = 1163

 Score = 1618 bits (4189), Expect = 0.0
 Identities = 802/1035 (77%), Positives = 901/1035 (87%), Gaps = 7/1035 (0%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            Y+API VD+ Y +G  +++ I  +  + IGR+P+MLRSC C L GK E+ELA LGECPLD
Sbjct: 130  YSAPIRVDVEYVEGSHDQKMIATRKGIEIGRLPIMLRSCCCTLYGKTESELATLGECPLD 189

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYFI+KG EKV+LIQEQLSKNRIII+ DKKG++ ASVTSS+E  KSKT+I M+K+KI+
Sbjct: 190  PGGYFIIKGNEKVLLIQEQLSKNRIIIDMDKKGNVNASVTSSSETIKSKTIIQMEKQKIY 249

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L+LN F K +PIMVVMKAMG+ SDQEVVQMVGRDPRY ALL+PSI+ECA E I+ ++QAL
Sbjct: 250  LELNQFSKKIPIMVVMKAMGMTSDQEVVQMVGRDPRYGALLMPSIEECAKEGIYTKEQAL 309

Query: 2601 EYLDNKVKKFAFSNVN--QEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
             YL+ KVK+  F + +  ++ + +++LRD+F+ANVPVR  +FRPKCIY AVMLRR+MDAI
Sbjct: 310  LYLEPKVKRSMFDSASSDKDSKVMAVLRDIFIANVPVRRSNFRPKCIYVAVMLRRIMDAI 369

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTKNLARS-FDNSN 2251
            LNKD +DDKDYVGNKRLELSGQ ISLLFEDLFKTM  EV+K +D  LTK    S FD + 
Sbjct: 370  LNKDTMDDKDYVGNKRLELSGQSISLLFEDLFKTMISEVRKTVDNILTKPSRSSRFDLAQ 429

Query: 2250 YLTRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKSRK 2071
            Y+ +D I+ GLER LSTGN+DLKRFKMHR GMTQVLARLSFI S+G MT+  PQFEKSRK
Sbjct: 430  YIRKDQISLGLERTLSTGNFDLKRFKMHRTGMTQVLARLSFIGSLGQMTRTKPQFEKSRK 489

Query: 2070 VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEGLE 1891
            VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALM HVTTDEEEGPLISLC  LGVE LE
Sbjct: 490  VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMAHVTTDEEEGPLISLCKCLGVEDLE 549

Query: 1890 LLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRCVY 1711
             LSAEELH+PNSFLV+FNG ILGKHR+PQR A  MRKLRRAGKIGEFVSV+VN+KQ CVY
Sbjct: 550  TLSAEELHSPNSFLVLFNGDILGKHRKPQRLATAMRKLRRAGKIGEFVSVFVNEKQHCVY 609

Query: 1710 IASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNALIA 1531
            IASDGGRVCRPLVIADKGISR+KE+HMQE+  GVRTF+DFL +GLIEYLDVNEQNNALIA
Sbjct: 610  IASDGGRVCRPLVIADKGISRVKEYHMQELNAGVRTFDDFLSDGLIEYLDVNEQNNALIA 669

Query: 1530 LYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLSR 1351
            LYE E     THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R
Sbjct: 670  LYEDEATTETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRR 729

Query: 1350 MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1171
            +D LLYLLVYPQRPLLTT+TIELVG+DKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR
Sbjct: 730  ID-LLYLLVYPQRPLLTTKTIELVGFDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 788

Query: 1170 GFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYDIY 991
            GFGRCI++KK V   Q Y NNTQDRI +P++  VD  KM+VLD+DGIAAPGEII   DIY
Sbjct: 789  GFGRCILMKKFVVANQNYSNNTQDRIIKPNKDEVDSGKMRVLDDDGIAAPGEIITANDIY 848

Query: 990  VNKEVPMNTK----DNSQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIKFQIRH 823
            V K+VP+ T+       ++  ++ ++Q YKG  GE  V+D+VAL SD +NNLC+K  IRH
Sbjct: 849  VKKQVPIVTRGAIRSGLKDSDYRSTFQRYKGPDGESCVVDKVALFSDKHNNLCVKLLIRH 908

Query: 822  TRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMIELL 643
            TRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMT+GKMIELL
Sbjct: 909  TRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELL 968

Query: 642  GGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSPLQAYI 463
            GGKAGVSCGRFHYGSAFGEPSGHAD VEAIS+TLV  GFSY+GKD++ SGITG PLQAYI
Sbjct: 969  GGKAGVSCGRFHYGSAFGEPSGHADKVEAISETLVRMGFSYDGKDYICSGITGCPLQAYI 1028

Query: 462  FMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASM 283
            FMGPIYYQKLKHMVLDKMHARG GPRV LTRQPTEG++R+GGLR+GEMERDCLIAYGASM
Sbjct: 1029 FMGPIYYQKLKHMVLDKMHARGSGPRVSLTRQPTEGKARNGGLRVGEMERDCLIAYGASM 1088

Query: 282  LIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACKLLFQE 103
            L+YERLMISSDPFEVQVCRVCGLLGYYNHK+K GICSSCKNG+NIS MKLPYACKLL QE
Sbjct: 1089 LLYERLMISSDPFEVQVCRVCGLLGYYNHKMKAGICSSCKNGDNISTMKLPYACKLLIQE 1148

Query: 102  LQSMNIVPRLKLTEA 58
            LQSMNIVPRLKL EA
Sbjct: 1149 LQSMNIVPRLKLAEA 1163


>ref|XP_003516394.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like isoform
            X1 [Glycine max]
          Length = 1166

 Score = 1612 bits (4175), Expect = 0.0
 Identities = 802/1040 (77%), Positives = 909/1040 (87%), Gaps = 12/1040 (1%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI  D+ YT    ++ + K+ + V IGRMP+MLRSC CVL GKDEAELA+LGECPLD
Sbjct: 129  YAAPICADVEYTLRSHDKPDNKRTLRVEIGRMPIMLRSCCCVLHGKDEAELAKLGECPLD 188

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KGTEKVILIQEQLSKNRIII+TDKKG++ ASVTSSTE  K+KTVI+M+ EK++
Sbjct: 189  PGGYFVIKGTEKVILIQEQLSKNRIIIDTDKKGNITASVTSSTEKIKTKTVIVMENEKLW 248

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            LQLN FPK VP+MVVMKAMG+ESDQEV+QMVGRDPRY+ LLLPSI+EC    ++ ++QAL
Sbjct: 249  LQLNKFPKKVPLMVVMKAMGMESDQEVIQMVGRDPRYSFLLLPSIEECRKCKVYTKEQAL 308

Query: 2601 EYLDNKVKKFAFSN--VNQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
            EYLD  VK+  +S+    +EG A S LRDVFLANVPV + +F+ KCIY AVM+RR+MDAI
Sbjct: 309  EYLDKLVKRPTYSSNSAEKEGAAFSALRDVFLANVPVDQDNFQKKCIYVAVMMRRIMDAI 368

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTK-NLARSFDNSN 2251
            LNKDA+DDKDYVGNKRLELSGQLISLLFEDLFK+M  EVK   D  L K + A++FD   
Sbjct: 369  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKSMTTEVKNLTDKMLDKPDKAKNFDICT 428

Query: 2250 YLTRDS--ITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKS 2077
             LTR    IT GLER LSTGN+++KRF+M RKGMTQVL RLSFI ++GHMT+VSPQFEKS
Sbjct: 429  LLTRTRSIITLGLERTLSTGNFEIKRFRMERKGMTQVLQRLSFIGALGHMTRVSPQFEKS 488

Query: 2076 RKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEG 1897
            RKVSGPRALQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEEE PLISL +SL V  
Sbjct: 489  RKVSGPRALQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEKPLISLFYSLDVAR 548

Query: 1896 LELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRC 1717
            +E L AEELHTP+SFLVIFNGLILGKHR+P  FA  +RKLRRAG+IGEFVSVYVN+KQ C
Sbjct: 549  IEHLFAEELHTPDSFLVIFNGLILGKHRRPLHFATRIRKLRRAGEIGEFVSVYVNEKQHC 608

Query: 1716 VYIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNAL 1537
            VY+ASDGGRVCRPLVIADKGISRIK+HHM+E+ DGV TF+DFLR+GL+EYLDVNE+NNAL
Sbjct: 609  VYLASDGGRVCRPLVIADKGISRIKQHHMKELMDGVCTFDDFLRDGLLEYLDVNEENNAL 668

Query: 1536 IALYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQL 1357
            IALYEG+     THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGKQAMGNIA+NQL
Sbjct: 669  IALYEGDATSETTHIEIEPFTILGVIAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAFNQL 728

Query: 1356 SRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSL 1177
             RMDSLLYLLVYPQRPLLTT+TIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SL
Sbjct: 729  RRMDSLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASL 788

Query: 1176 DRGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYD 997
            DRGFGRCIV+KK  AI+QK+ N+T DRI RP+R      +M++LD+DGIAAPGEI+RPYD
Sbjct: 789  DRGFGRCIVMKKYNAIIQKHSNDTSDRILRPNRTADTAGRMQILDDDGIAAPGEILRPYD 848

Query: 996  IYVNKEVPMNTKD-------NSQNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIK 838
            IY+NK+ P++T+        N  +  ++ + Q++KG  GE  V+DRV L SD +NN+CIK
Sbjct: 849  IYINKQSPIDTRTPKTGSAANLPDSAYRSNAQSFKGNGGE--VVDRVVLCSDKDNNMCIK 906

Query: 837  FQIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGK 658
            F IRHTRRPE+GDKFSSRHGQKGVCGTIV QEDFPFSE+GICPDLIMNPHGFPSRMT+GK
Sbjct: 907  FLIRHTRRPELGDKFSSRHGQKGVCGTIVPQEDFPFSEKGICPDLIMNPHGFPSRMTVGK 966

Query: 657  MIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSP 478
            MIELLGGKAGVSCGRFHYGSAFGE SGHAD VE IS+TLV KGF+Y+GKDF+YSGITG P
Sbjct: 967  MIELLGGKAGVSCGRFHYGSAFGERSGHADKVETISETLVSKGFNYSGKDFIYSGITGCP 1026

Query: 477  LQAYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIA 298
            LQAYIFMGPIYYQKLKHMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIA
Sbjct: 1027 LQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIA 1086

Query: 297  YGASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACK 118
            YGASMLIYERLM+SSDPFEVQVC  CGLLGYYNHKLKTGICSSCKNG+NIS MKLPYACK
Sbjct: 1087 YGASMLIYERLMLSSDPFEVQVCTACGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACK 1146

Query: 117  LLFQELQSMNIVPRLKLTEA 58
            L+ QELQSMNIVPRLKL +A
Sbjct: 1147 LMIQELQSMNIVPRLKLADA 1166


>ref|XP_006398163.1| hypothetical protein EUTSA_v10000748mg [Eutrema salsugineum]
            gi|557099252|gb|ESQ39616.1| hypothetical protein
            EUTSA_v10000748mg [Eutrema salsugineum]
          Length = 1164

 Score = 1611 bits (4172), Expect = 0.0
 Identities = 794/1050 (75%), Positives = 916/1050 (87%), Gaps = 22/1050 (2%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI V+I Y  G   + +   K NVIIGRMP+MLRSCRCVL GKDE ELARLGECPLD
Sbjct: 114  YAAPIYVNIEYAHGSHGKTQHSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLD 173

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KGTEKV+LIQEQLSKNRIII++DKKG++ ASVTSSTE TKSKTVI M+K KI+
Sbjct: 174  PGGYFVIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKGKIY 233

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L L+ F K +PI++V+KAMG+ESDQE+VQMVGRDPR++A LLPSI+EC +E +  ++QAL
Sbjct: 234  LFLHQFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTRKQAL 293

Query: 2601 EYLDNKVKKFAFSNV-NQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAIL 2425
            +YL+ KVKK ++     ++GRAL ILRDVFLA+VPVR+ +FR KC Y  VMLRRM++A+L
Sbjct: 294  DYLEAKVKKTSYGPPPEKDGRALYILRDVFLAHVPVRDNNFRQKCFYVGVMLRRMIEAML 353

Query: 2424 NKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTK-NLARSFDNSNY 2248
            NKDA+DDKDYVGNKRLELSGQLISLLFEDLFKTM  E  K++D  L K N A  FD S  
Sbjct: 354  NKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMITEAVKKVDGILQKPNRASRFDFSQC 413

Query: 2247 LTRD---SITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKS 2077
            LT +   +I+ GLER LSTGN+D+KRF+MHRKGMTQVL RLSFI S+G +TK+SPQFEKS
Sbjct: 414  LTGEKNHNISFGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKS 473

Query: 2076 RKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEG 1897
            RKVSGPR+LQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEEEGPL+++C+ LGV  
Sbjct: 474  RKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTD 533

Query: 1896 LELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRC 1717
            LE+LSAEELHTP+SFLVIFNGLILGKHR+PQ FA ++R+LRRAGKIGEFVSV++N+KQ C
Sbjct: 534  LEVLSAEELHTPDSFLVIFNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFINEKQHC 593

Query: 1716 VYIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNAL 1537
            VY+ASDGGRVCRPLVIADKG+SR+K+HHM+E++DGVRTF+DF+R+GLIEYLDVNE+NNAL
Sbjct: 594  VYVASDGGRVCRPLVIADKGVSRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNAL 653

Query: 1536 IALYEGEP-------------KEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAM 1396
            IALYE +              +E  THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAM
Sbjct: 654  IALYESDATSEMAETAEAAKIREGTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAM 713

Query: 1395 GKQAMGNIAYNQLSRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGY 1216
            GKQAMGNIAYNQL+RMD+LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS +GY
Sbjct: 714  GKQAMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNTGY 773

Query: 1215 DIEDAIVMNKSSLDRGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDED 1036
            DIEDAIVMNK+SLDRGFGRCIV+KK VA  QKYGN+  DRI RP R G D  KM++LD+D
Sbjct: 774  DIEDAIVMNKASLDRGFGRCIVMKKIVATCQKYGNDAVDRILRPQRTGPDAEKMQILDDD 833

Query: 1035 GIAAPGEIIRPYDIYVNKEVPMNTKDNS----QNIQFKPSYQTYKGAKGERAVIDRVALS 868
            GIAAPGEIIRP D+Y+NK++P++T+DN      + Q++P+ + +KG +GE  V+DRVAL 
Sbjct: 834  GIAAPGEIIRPNDVYINKQIPVDTRDNITSPLSDSQYRPAREYFKGPEGETQVVDRVALC 893

Query: 867  SDVNNNLCIKFQIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPH 688
            SD N NLCIK+ IRHTRRPE+GDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPH
Sbjct: 894  SDKNGNLCIKYIIRHTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPH 953

Query: 687  GFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKD 508
            GFPSRMT+GKMIELLG KAGV  GRFHYGSAFGE SGHAD VE IS TLV+ GFSY+GKD
Sbjct: 954  GFPSRMTVGKMIELLGSKAGVCSGRFHYGSAFGERSGHADKVETISATLVKHGFSYSGKD 1013

Query: 507  FLYSGITGSPLQAYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRL 328
             LYSG++G PLQ Y+FMGPIYYQKLKHMVLDKMHARG GPRVM+TRQPTEG+S++GGLR+
Sbjct: 1014 LLYSGLSGEPLQTYVFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRV 1073

Query: 327  GEMERDCLIAYGASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENI 148
            GEMERDCLIAYGASMLIYERLMISSDPFEVQVCR CGLLGYYN+KLK   CS+CKNG+NI
Sbjct: 1074 GEMERDCLIAYGASMLIYERLMISSDPFEVQVCRTCGLLGYYNYKLKKAFCSTCKNGDNI 1133

Query: 147  SKMKLPYACKLLFQELQSMNIVPRLKLTEA 58
            + MKLPYACKLLFQELQSMN+VPRLKL EA
Sbjct: 1134 ATMKLPYACKLLFQELQSMNVVPRLKLVEA 1163


>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
            lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
            ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
          Length = 1165

 Score = 1603 bits (4151), Expect = 0.0
 Identities = 790/1052 (75%), Positives = 915/1052 (86%), Gaps = 24/1052 (2%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI V+I Y  G   ++    K + IIGRMP+MLRSCRCVL GKDE ELARLGECPLD
Sbjct: 114  YAAPIYVNIEYVHGSHGKKATSVKNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLD 173

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KGTEKV+LIQEQLSKNRIII++DKKG++ ASVTSSTE TKSKTVI M+KEKI+
Sbjct: 174  PGGYFVIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIY 233

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L L+ F K +PI++V+KAMG+ESDQE+VQMVGRDPR++A LLPSI+EC +E +  Q+QAL
Sbjct: 234  LFLHQFVKKIPIVIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQAL 293

Query: 2601 EYLDNKVKKFAFSNV-NQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAIL 2425
            +YL+ KVKK ++     ++GRAL ILRD+FLA+VPVR+ +FR KC Y  VMLRRM++A+L
Sbjct: 294  DYLEAKVKKTSYGPPPEKDGRALYILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAML 353

Query: 2424 NKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTK-NLARSFDNSNY 2248
            NKD++DDKDYVGNKRLELSGQL+SLLFEDLFKTM  E  K++D  L+K + A  FD S Y
Sbjct: 354  NKDSMDDKDYVGNKRLELSGQLMSLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQY 413

Query: 2247 LT----RDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEK 2080
            LT    +++I+ GLER LSTGN+D+KRF+MHRKGMTQVL RLSFI S+G +TK+SPQFEK
Sbjct: 414  LTTGDSQNTISVGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEK 473

Query: 2079 SRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVE 1900
            SRKVSGPR+LQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEEEGPL+++C+ LGV 
Sbjct: 474  SRKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVT 533

Query: 1899 GLELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQR 1720
             LE+LSAEELHTP+SFLVI NGLILGKHR+PQ FA ++R+LRRAGKIGEFVSV+ N+KQ 
Sbjct: 534  DLEVLSAEELHTPDSFLVILNGLILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQH 593

Query: 1719 CVYIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNA 1540
            CVY+ASDGGRVCRPLVIADKGISR+K+HHM+E++DGVRTF+DF+R+GLIEYLDVNE+NNA
Sbjct: 594  CVYVASDGGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNA 653

Query: 1539 LIALYEGEP-------------KEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCA 1399
            LIALYE E              K   THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCA
Sbjct: 654  LIALYESEATTELDEGAEAAKIKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCA 713

Query: 1398 MGKQAMGNIAYNQLSRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSG 1219
            MGKQAMGNIAYNQL+RMD+LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS SG
Sbjct: 714  MGKQAMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNSG 773

Query: 1218 YDIEDAIVMNKSSLDRGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDE 1039
            YDIEDAIVMNKSSLDRGFGRCIV+KK VA  QKY N T DRI  P R G D  KM++LD+
Sbjct: 774  YDIEDAIVMNKSSLDRGFGRCIVMKKIVATCQKYENGTVDRILMPQRTGPDAEKMQILDD 833

Query: 1038 DGIAAPGEIIRPYDIYVNKEVPMNTKDNS-----QNIQFKPSYQTYKGAKGERAVIDRVA 874
            DGIA+PGEIIRP D+Y+ K++P+ T  +       + Q++P+ + +KG +GE  V+DRVA
Sbjct: 834  DGIASPGEIIRPNDVYIYKQIPVCTTRDKITSPLSDSQYRPAREFFKGPEGETQVVDRVA 893

Query: 873  LSSDVNNNLCIKFQIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMN 694
            L SD + +LCIK+ IRHTRRPE+GDKFSSRHGQKGVCGTI+QQEDFPFSE GICPDLIMN
Sbjct: 894  LCSDKSGSLCIKYIIRHTRRPELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMN 953

Query: 693  PHGFPSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNG 514
            PHGFPSRMT+GKMIELLG KAGVSCGRFHYGSAFGE SGHAD VE ISKTLV+KGFSY+G
Sbjct: 954  PHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGERSGHADKVETISKTLVDKGFSYSG 1013

Query: 513  KDFLYSGITGSPLQAYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGL 334
            KD LYSG++G PL+AYIFMGPIYYQKLKHMVLDKMHARG GPRVM+TRQPTEG+S++GGL
Sbjct: 1014 KDLLYSGLSGEPLEAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGL 1073

Query: 333  RLGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGE 154
            R+GEMERDCLIAYGASMLIYERLMISSDPFEVQVCR CGLLGYYN+KLK  +CS+CKNG+
Sbjct: 1074 RVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCSTCKNGD 1133

Query: 153  NISKMKLPYACKLLFQELQSMNIVPRLKLTEA 58
            NI+ MKLPYACKLLFQELQSMN+VPRLKL EA
Sbjct: 1134 NIATMKLPYACKLLFQELQSMNVVPRLKLVEA 1165


>ref|NP_199327.4| DNA-directed RNA polymerase RPC2 [Arabidopsis thaliana]
            gi|332007826|gb|AED95209.1| DNA-directed RNA polymerase
            RPC2 [Arabidopsis thaliana]
          Length = 1161

 Score = 1602 bits (4148), Expect = 0.0
 Identities = 793/1048 (75%), Positives = 908/1048 (86%), Gaps = 20/1048 (1%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPI V+I Y  G    +    K NVIIGRMP+MLRSCRCVL GKDE ELARLGECPLD
Sbjct: 114  YAAPIFVNIEYVHGSHGNKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLD 173

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYFI+KGTEKV+LIQEQLSKNRIII++DKKG++ ASVTSSTE TKSKTVI M+KEKI+
Sbjct: 174  PGGYFIIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIY 233

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L L+ F K +PI++V+KAMG+ESDQE+VQMVGRDPR++A LLPSI+EC +E +  Q+QAL
Sbjct: 234  LFLHRFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQAL 293

Query: 2601 EYLDNKVKKFAFSNV-NQEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAIL 2425
            +YL+ KVKK ++     ++GRALSILRD+FLA+VPV + +FR KC Y  VMLRRM++A+L
Sbjct: 294  DYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAML 353

Query: 2424 NKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTKNLARS-FDNSNY 2248
            NKDA+DDKDYVGNKRLELSGQLISLLFEDLFKTM  E  K +D  L K +  S FD S  
Sbjct: 354  NKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQC 413

Query: 2247 LTRDS---ITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKS 2077
            L +DS   I+ GLER LSTGN+D+KRF+MHRKGMTQVL RLSFI S+G +TK+SPQFEKS
Sbjct: 414  LNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKS 473

Query: 2076 RKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEG 1897
            RKVSGPR+LQPSQWGMLCPCDTPEGE+CGLVKNLALMTHVTTDEEEGPL+++C+ LGV  
Sbjct: 474  RKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTD 533

Query: 1896 LELLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRC 1717
            LE+LSAEELHTP+SFLVI NGLILGKH +PQ FA ++R+LRRAGKIGEFVSV+ N+KQ C
Sbjct: 534  LEVLSAEELHTPDSFLVILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHC 593

Query: 1716 VYIASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNAL 1537
            VY+ASD GRVCRPLVIADKGISR+K+HHM+E++DGVRTF+DF+R+GLIEYLDVNE+NNAL
Sbjct: 594  VYVASDVGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNAL 653

Query: 1536 IALYEGE-----------PKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGK 1390
            IALYE +            K   THIEIEPFTILGV AGLIP+PHHNQSPRNTYQCAMGK
Sbjct: 654  IALYESDGTTELDEGAEAAKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGK 713

Query: 1389 QAMGNIAYNQLSRMDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDI 1210
            QAMGNIAYNQL+RMD+LLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMS+SGYDI
Sbjct: 714  QAMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYDI 773

Query: 1209 EDAIVMNKSSLDRGFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGI 1030
            EDAIVMNKSSLDRGFGRCIV+KK VA+ QKY N T DRI  P R G D  KM++LD+DG+
Sbjct: 774  EDAIVMNKSSLDRGFGRCIVMKKIVAMSQKYDNCTADRILIPQRTGPDAEKMQILDDDGL 833

Query: 1029 AAPGEIIRPYDIYVNKEVPMNTKDNSQNI----QFKPSYQTYKGAKGERAVIDRVALSSD 862
            A PGEIIRP DIY+NK+VP++T     +     Q++P+ + +KG +GE  V+DRVAL SD
Sbjct: 834  ATPGEIIRPNDIYINKQVPVDTVTKFTSALSDSQYRPAREYFKGPEGETQVVDRVALCSD 893

Query: 861  VNNNLCIKFQIRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGF 682
                LCIK+ IRHTRRPE+GDKFSSRHGQKGVCG I+QQEDFPFSE GICPDLIMNPHGF
Sbjct: 894  KKGQLCIKYIIRHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGF 953

Query: 681  PSRMTIGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFL 502
            PSRMT+GKMIELLG KAGVSCGRFHYGSAFGE SGHAD VE IS TLVEKGFSY+GKD L
Sbjct: 954  PSRMTVGKMIELLGSKAGVSCGRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLL 1013

Query: 501  YSGITGSPLQAYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGE 322
            YSGI+G P++AYIFMGPIYYQKLKHMVLDKMHARG GPRVM+TRQPTEG+S++GGLR+GE
Sbjct: 1014 YSGISGEPVEAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGE 1073

Query: 321  MERDCLIAYGASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISK 142
            MERDCLIAYGASMLIYERLMISSDPFEVQVCR CGLLGYYN+KLK  +C++CKNG+NI+ 
Sbjct: 1074 MERDCLIAYGASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIAT 1133

Query: 141  MKLPYACKLLFQELQSMNIVPRLKLTEA 58
            MKLPYACKLLFQELQSMN+VPRLKLTEA
Sbjct: 1134 MKLPYACKLLFQELQSMNVVPRLKLTEA 1161


>ref|XP_004510587.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cicer
            arietinum]
          Length = 1134

 Score = 1596 bits (4133), Expect = 0.0
 Identities = 791/1038 (76%), Positives = 893/1038 (86%), Gaps = 10/1038 (0%)
 Frame = -2

Query: 3141 YAAPILVDITYTKGLKERREIKQKVNVIIGRMPVMLRSCRCVLTGKDEAELARLGECPLD 2962
            YAAPILV + YT+G  +      K  V+IGRMP+MLRSC CVL  +DEAELA+LGECPLD
Sbjct: 98   YAAPILVSVEYTQGSPDNVIKIPKNKVVIGRMPIMLRSCCCVLYNRDEAELAKLGECPLD 157

Query: 2961 PGGYFIVKGTEKVILIQEQLSKNRIIIETDKKGHLVASVTSSTEATKSKTVILMDKEKIF 2782
            PGGYF++KGTEKVILIQEQLSKNRIII+TDKK ++ ASVTSSTE  K+KT ILM++EK++
Sbjct: 158  PGGYFVIKGTEKVILIQEQLSKNRIIIDTDKKKNITASVTSSTEKVKTKTTILMEREKMW 217

Query: 2781 LQLNAFPKPVPIMVVMKAMGIESDQEVVQMVGRDPRYAALLLPSIQECATENIFNQQQAL 2602
            L+LN F   VP+M+VMKAMG+ESD EVVQM+GRDPRY  LLLPSI+EC    +  Q QAL
Sbjct: 218  LELNQFQTKVPLMIVMKAMGMESDHEVVQMIGRDPRYGLLLLPSIEECNKSGVSTQAQAL 277

Query: 2601 EYLDNKVKKFAFSNVN--QEGRALSILRDVFLANVPVREQSFRPKCIYAAVMLRRMMDAI 2428
             YLD+K K+  FS +   +EGRA SILRDVFLANVPV E +FRPKCIY AVM+RR++DAI
Sbjct: 278  AYLDSKAKRSMFSTMQPEKEGRAFSILRDVFLANVPVHEDNFRPKCIYVAVMMRRILDAI 337

Query: 2427 LNKDAIDDKDYVGNKRLELSGQLISLLFEDLFKTMNGEVKKQMDLALTK-NLARSFDNSN 2251
            LNKDA+DDKDYVGNKRLELSGQLISLLFEDLFKTM  E++   D  L K + A+ FD + 
Sbjct: 338  LNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMTTELQTLTDKYLEKPDRAKKFDFTT 397

Query: 2250 YLTRDSITQGLERALSTGNWDLKRFKMHRKGMTQVLARLSFIASVGHMTKVSPQFEKSRK 2071
             L RD I+ GLER LSTGN+D+KRFKMHR GMTQVL RLSFI+++G MT+V PQFEKS+K
Sbjct: 398  LLNRDYISPGLERYLSTGNFDIKRFKMHRSGMTQVLQRLSFISALGQMTRVKPQFEKSKK 457

Query: 2070 VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCHSLGVEGLE 1891
            VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTD++E PLISLC+ LGVE +E
Sbjct: 458  VSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDDDEAPLISLCYILGVEDIE 517

Query: 1890 LLSAEELHTPNSFLVIFNGLILGKHRQPQRFARNMRKLRRAGKIGEFVSVYVNDKQRCVY 1711
             LS EELHTPNS+LVIFNGLILGKHR+PQRFA  MR LRRAG IGEFVSVY+N+KQ CVY
Sbjct: 518  HLSGEELHTPNSYLVIFNGLILGKHRRPQRFATAMRNLRRAGVIGEFVSVYLNEKQCCVY 577

Query: 1710 IASDGGRVCRPLVIADKGISRIKEHHMQEMRDGVRTFNDFLREGLIEYLDVNEQNNALIA 1531
            +ASDGGRVCRPLVIADKGISR+K HHM+E++DGV TFN FLR GLIEYLDVNE+NNALIA
Sbjct: 578  LASDGGRVCRPLVIADKGISRVKAHHMKELKDGVTTFNHFLRNGLIEYLDVNEENNALIA 637

Query: 1530 LYEGEPKEHITHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLSR 1351
            LYEG+     THIEIEPFTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL R
Sbjct: 638  LYEGDATPKTTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRR 697

Query: 1350 MDSLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 1171
            MD+LLYLLVYPQRPLLTT++IELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR
Sbjct: 698  MDTLLYLLVYPQRPLLTTKSIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDR 757

Query: 1170 GFGRCIVLKKSVAILQKYGNNTQDRIRRPDRKGVDHHKMKVLDEDGIAAPGEIIRPYDIY 991
            GFGRCIV+K+ VAI QKY N T+DRI RP+R      +M++LD+DGIAAPGEIIRP D+Y
Sbjct: 758  GFGRCIVMKRYVAIRQKYSNGTEDRIIRPNRAADTTGRMQILDDDGIAAPGEIIRPNDMY 817

Query: 990  VNKEVPMNTKDNS-------QNIQFKPSYQTYKGAKGERAVIDRVALSSDVNNNLCIKFQ 832
            +NK+ P+ T+  +        +  ++ + QT+    G   V+DRV L +D + NLCIKF 
Sbjct: 818  INKQSPIETRATTTGSTAKLPDNAYRSTPQTFNKCHGGE-VVDRVVLCNDKDTNLCIKFL 876

Query: 831  IRHTRRPEVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTIGKMI 652
             RHTRRPE+GDKFSSRHGQKGVCG    QEDFPFSE+GICPDLIMNPHGFPSRMT+GKMI
Sbjct: 877  TRHTRRPELGDKFSSRHGQKGVCGXXXXQEDFPFSEKGICPDLIMNPHGFPSRMTVGKMI 936

Query: 651  ELLGGKAGVSCGRFHYGSAFGEPSGHADTVEAISKTLVEKGFSYNGKDFLYSGITGSPLQ 472
            ELLGGKAGVSCGRFHYGSAFGE SGHAD VE IS+TLV+ GF+YNGKDF+YSGITG PLQ
Sbjct: 937  ELLGGKAGVSCGRFHYGSAFGERSGHADKVETISETLVKHGFNYNGKDFIYSGITGCPLQ 996

Query: 471  AYIFMGPIYYQKLKHMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYG 292
            AYIFMGPIYYQKLKHMVLDKMHARG GPR ++TRQPTEGR+R+GGLR+GEMERDCLIAYG
Sbjct: 997  AYIFMGPIYYQKLKHMVLDKMHARGNGPRALMTRQPTEGRARNGGLRVGEMERDCLIAYG 1056

Query: 291  ASMLIYERLMISSDPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGENISKMKLPYACKLL 112
            ASMLI+ERLMISSDPFEVQVCR CGLLGYYNHKLKTGICSSCKNGE IS +KLPYACKLL
Sbjct: 1057 ASMLIFERLMISSDPFEVQVCRKCGLLGYYNHKLKTGICSSCKNGEQISTVKLPYACKLL 1116

Query: 111  FQELQSMNIVPRLKLTEA 58
             QELQSMNIVPRLKL +A
Sbjct: 1117 MQELQSMNIVPRLKLADA 1134