BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00010525
         (2206 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]              679   0.0  
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   674   0.0  
ref|XP_007018442.1| Pre-mRNA-processing protein 40A isoform 7 [T...   662   0.0  
ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [T...   662   0.0  
ref|XP_007018443.1| Pre-mRNA-processing protein 40A isoform 8 [T...   657   0.0  
ref|XP_007018441.1| Pre-mRNA-processing protein 40A isoform 6 [T...   654   0.0  
ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [T...   654   0.0  
ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [T...   654   0.0  
ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [T...   654   0.0  
ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prun...   602   e-169
ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [A...   601   e-169
ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-l...   585   e-164
ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-l...   585   e-164
ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-l...   585   e-164
gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Mor...   582   e-163
ref|XP_002320019.2| FF domain-containing family protein [Populus...   580   e-163
ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-l...   569   e-159
ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-l...   566   e-158
ref|XP_007042685.1| Pre-mRNA-processing protein 40B, putative [T...   553   e-154
ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-l...   553   e-154

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  679 bits (1753), Expect = 0.0
 Identities = 382/703 (54%), Positives = 446/703 (63%), Gaps = 30/703 (4%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQ 365
            M +N QSSG QPL PP VGS GP QNFGPP+SMQFRP    QQG PFIP  S+QFRP+GQ
Sbjct: 1    MANNPQSSGAQPLRPPAVGSMGP-QNFGPPLSMQFRPAVPGQQGHPFIPAASQQFRPIGQ 59

Query: 366  GMPVPNVG-PSPQNQQLPFPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQ 542
             +  PNVG PS QNQ   F  +M                SQ I MP++QQNRP+TS SPQ
Sbjct: 60   NISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQ 119

Query: 543  PHQ-----NNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPAS 707
            P+Q     N+               YTFAP+ +GQ Q+ INAS+ +QPISQMH   AP  
Sbjct: 120  PNQTAPPLNSHMPGLAGPGMPFSSSYTFAPASFGQPQSTINASAQFQPISQMH---APVG 176

Query: 708  GQTWLPSGPVATAM------QGQQSSATPAAVPATNLQPNPSIQLSSDWQEHTSTDGRRY 869
            GQ WL SG  + A+       GQQ S T A +PA N+ PNP+ Q SSDWQEHTS DGRRY
Sbjct: 177  GQPWLSSGSQSGALVTPVHQAGQQPSVT-ADIPAGNV-PNPTHQSSSDWQEHTSADGRRY 234

Query: 870  YYNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKX 1049
            YYNKKT+ SSWEKP+ELMTPIERADAST WKEFT  +GRKYYYNKVTK SKWTIPEELK 
Sbjct: 235  YYNKKTRLSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKL 294

Query: 1050 XXXXXXXXXXXXXXXXXXXXXXPQESLTIPLPE---------AXXXXXXXXXXXXXXXXX 1202
                                      + + L E         +                 
Sbjct: 295  AREQAEKSVSQETQSEMGTTSNEPAVVAVSLAETPSTASVSVSSTTSSTISGMTSSPVPV 354

Query: 1203 XXXXXXXNQPTIAASGSPSLPV----LSTNAAGVQSPVAAVTTLSNSTSRDGGVPVA--- 1361
                   N P +  SG+ ++P+    ++T+A GVQ  +   T L  + S   GV  A   
Sbjct: 355  TPVVAVVNPPPVVVSGTSAIPIAQSAVTTSAVGVQPSMG--TPLPAAVSGSTGVAAAFIN 412

Query: 1362 --TTPAASTSDIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQE 1535
               T   S  +++     GAS+QD+EEA+KG+AVAGKINVTP EEK +++E LVY+ K E
Sbjct: 413  PNATSMTSFENLSADATNGASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLE 472

Query: 1536 AKIAFKALLESANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEE 1715
            AK AFKALLESANVESDW W+QAM+ IINDKRYGALKTLGERKQAFNEYLGQRKK EAEE
Sbjct: 473  AKNAFKALLESANVESDWTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEE 532

Query: 1716 RRVRQKKAREEFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLD 1895
            RR+RQKKAREEF  MLEE KELTSS +W KA+ MF++DER+KAV+R+RDRED+FENF ++
Sbjct: 533  RRMRQKKAREEFTTMLEECKELTSSIKWSKAVDMFQDDERFKAVERSRDREDLFENFIME 592

Query: 1896 LXXXXXXXXXXXXXXNIMEYKQFLESCDFIKPSSQWRKVQDRLEDDERCSRLEKIDRLDI 2075
            L              N MEY+QFLESCDFIK +SQWRKVQDRLEDDERCSRLEKIDRL+I
Sbjct: 593  LQKKERTKALEEQKRNRMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEI 652

Query: 2076 FXXXXXXXXXXXXXXXXXXXXXXXXAERKNRDEFRKLMEEHVA 2204
            F                        AERKNRDEFRKLMEEHVA
Sbjct: 653  FQEYIRDLEREEEEQRKIQKEQLRRAERKNRDEFRKLMEEHVA 695


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score =  674 bits (1738), Expect = 0.0
 Identities = 376/694 (54%), Positives = 434/694 (62%), Gaps = 14/694 (2%)
 Frame = +3

Query: 165  EACSFEDMTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSE 344
            EAC    M +N QSSG QPL PP VGS GP QNFGPP+SMQFRP    QQG PFIP  S+
Sbjct: 8    EACLCAGMANNPQSSGAQPLRPPAVGSMGP-QNFGPPLSMQFRPAVPGQQGHPFIPAASQ 66

Query: 345  QFRPVGQGMPVPNVG-PSPQNQQLPFPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRP 521
            QFRP+GQ +  PNVG PS QNQ   F  +M                SQ I MP++QQNRP
Sbjct: 67   QFRPIGQNISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRP 126

Query: 522  ITSESPQPHQN----NQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHT 689
            +TS SPQP+Q     N H               FAP+ +GQ Q+ INAS+ +QPISQMH 
Sbjct: 127  LTSSSPQPNQTAPPLNSHMPGL-----------FAPASFGQPQSTINASAQFQPISQMH- 174

Query: 690  GVAPASGQTWLPSGPVATAM------QGQQSSATPAAVPATNLQPNPSIQLSSDWQEHTS 851
              AP  GQ WL SG  + A+       GQQ S T     +    PNP+ Q SSDWQEHTS
Sbjct: 175  --APVGGQPWLSSGSQSGALVTPVHQAGQQPSVTADIPVSAGNVPNPTHQSSSDWQEHTS 232

Query: 852  TDGRRYYYNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTI 1031
             DGRRYYYNKKT+ SSWEKP+ELMTPIERADAST WKEFT  +GRKYYYNKVTK SKWTI
Sbjct: 233  ADGRRYYYNKKTRLSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTI 292

Query: 1032 PEELKXXXXXXXXXXXXXXXXXXXXXXXPQESLTIPLPEAXXXXXXXXXXXXXXXXXXXX 1211
            PEELK                           + + L E                     
Sbjct: 293  PEELKLAREQAEKSVSQETQSEMGTTSNEPAVVAVSLAETPSTASVSVSSTTSSTISGMT 352

Query: 1212 XXXXNQPTIAASGSPSLPVLSTNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAASTSDI 1391
                    + A  +P  PV+ +  + +    +AVTT +       G P+    + ST   
Sbjct: 353  SSPVPVTPVVAVVNPP-PVVVSGTSAIPIAQSAVTTSAVGVQPSMGTPLPAAVSGSTGVA 411

Query: 1392 AN---SLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIAFKALL 1562
            AN       GAS+QD+EEA+KG+AVAGKINVTP EEK +++E LVY+ K EAK AFKALL
Sbjct: 412  ANLSADATNGASMQDIEEAKKGVAVAGKINVTPLEEKTLDDEPLVYSTKLEAKNAFKALL 471

Query: 1563 ESANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVRQKKAR 1742
            ESANVESDW W+QAM+ IINDKRYGALKTLGERKQAFNEYLGQRKK EAEERR+RQKKAR
Sbjct: 472  ESANVESDWTWDQAMKAIINDKRYGALKTLGERKQAFNEYLGQRKKIEAEERRMRQKKAR 531

Query: 1743 EEFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXXXXXXX 1922
            EEF  MLEE KELTSS +W KA+ MF++DER+KAV+R+RDRED+FENF ++L        
Sbjct: 532  EEFTTMLEECKELTSSIKWSKAVDMFQDDERFKAVERSRDREDLFENFIMELQKKERTKA 591

Query: 1923 XXXXXXNIMEYKQFLESCDFIKPSSQWRKVQDRLEDDERCSRLEKIDRLDIFXXXXXXXX 2102
                  N MEY+QFLESCDFIK +SQWRKVQDRLEDDERCSRLEKIDRL+IF        
Sbjct: 592  LEEQKRNRMEYRQFLESCDFIKVNSQWRKVQDRLEDDERCSRLEKIDRLEIFQEYIRDLE 651

Query: 2103 XXXXXXXXXXXXXXXXAERKNRDEFRKLMEEHVA 2204
                            AERKNRDEFRKLMEEHVA
Sbjct: 652  REEEEQRKIQKEQLRRAERKNRDEFRKLMEEHVA 685


>ref|XP_007018442.1| Pre-mRNA-processing protein 40A isoform 7 [Theobroma cacao]
            gi|508723770|gb|EOY15667.1| Pre-mRNA-processing protein
            40A isoform 7 [Theobroma cacao]
          Length = 787

 Score =  662 bits (1707), Expect = 0.0
 Identities = 371/698 (53%), Positives = 433/698 (62%), Gaps = 26/698 (3%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQ 365
            M +NSQ S  QP WPP VGS GP Q++G P+S QFRPV   QQGQ F+P  S+QFRPVGQ
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGP-QSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ 59

Query: 366  GMPVPNVG-PSPQNQQLPFPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQ 542
             +P  NVG P+ QNQQ+ F   M                +Q + +PF Q NRP+TS SPQ
Sbjct: 60   -VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 543  PHQ-----NNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPAS 707
             HQ     N+               Y++ PS +GQ QNN++ASS +QP SQ+H  VAP +
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 708  GQTWLPSG--PVATAMQGQQSSATPAAVPATNLQPNPSIQL---SSDWQEHTSTDGRRYY 872
            GQ WL SG   V+ A+  QQ+   P  + + +   N  I     +SDWQEHTS DGRRYY
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRYY 238

Query: 873  YNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXX 1052
            YNKKT+QSSWEKP+ELMTPIERADAST WKEFT  +GRKYYYNKVTK SKWTIPEELK  
Sbjct: 239  YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 298

Query: 1053 XXXXXXXXXXXXXXXXXXXXXPQESLTIP---LPEAXXXXXXXXXXXXXXXXXXXXXXXX 1223
                                    +  +    +P A                        
Sbjct: 299  REQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVA 358

Query: 1224 NQPTIAASGSPSLPV---LSTNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAAST---- 1382
            N      SGS  +PV    +TNA+ VQSP  AVT L   +S     PV +  A +T    
Sbjct: 359  NPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 1383 -----SDIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIA 1547
                 S  +     GAS QD+EEA+KGMA AGK+NVTP EEK  ++E LVYANKQEAK A
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1548 FKALLESANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVR 1727
            FK+LLESANV+SDW WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK EAEERR+R
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1728 QKKAREEFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXX 1907
            QKKAREEF KMLEESKELTSS RW KA  +FENDER+KAV+RARDRED+FEN+ ++L   
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1908 XXXXXXXXXXXNIMEYKQFLESCDFIKPSSQWRKVQDRLEDDERCSRLEKIDRLDIFXXX 2087
                       NI EY++FLESCDFIK +SQWRKVQDRLEDDERCSRLEKIDRL +F   
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDY 658

Query: 2088 XXXXXXXXXXXXXXXXXXXXXAERKNRDEFRKLMEEHV 2201
                                 AERKNRD FRKLM+EHV
Sbjct: 659  IHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHV 696


>ref|XP_007018436.1| Pre-mRNA-processing protein 40A isoform 1 [Theobroma cacao]
            gi|590596803|ref|XP_007018437.1| Pre-mRNA-processing
            protein 40A isoform 1 [Theobroma cacao]
            gi|508723764|gb|EOY15661.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
            gi|508723765|gb|EOY15662.1| Pre-mRNA-processing protein
            40A isoform 1 [Theobroma cacao]
          Length = 1032

 Score =  662 bits (1707), Expect = 0.0
 Identities = 371/698 (53%), Positives = 433/698 (62%), Gaps = 26/698 (3%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQ 365
            M +NSQ S  QP WPP VGS GP Q++G P+S QFRPV   QQGQ F+P  S+QFRPVGQ
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGP-QSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ 59

Query: 366  GMPVPNVG-PSPQNQQLPFPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQ 542
             +P  NVG P+ QNQQ+ F   M                +Q + +PF Q NRP+TS SPQ
Sbjct: 60   -VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 543  PHQ-----NNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPAS 707
             HQ     N+               Y++ PS +GQ QNN++ASS +QP SQ+H  VAP +
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 708  GQTWLPSG--PVATAMQGQQSSATPAAVPATNLQPNPSIQL---SSDWQEHTSTDGRRYY 872
            GQ WL SG   V+ A+  QQ+   P  + + +   N  I     +SDWQEHTS DGRRYY
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRYY 238

Query: 873  YNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXX 1052
            YNKKT+QSSWEKP+ELMTPIERADAST WKEFT  +GRKYYYNKVTK SKWTIPEELK  
Sbjct: 239  YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 298

Query: 1053 XXXXXXXXXXXXXXXXXXXXXPQESLTIP---LPEAXXXXXXXXXXXXXXXXXXXXXXXX 1223
                                    +  +    +P A                        
Sbjct: 299  REQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVA 358

Query: 1224 NQPTIAASGSPSLPV---LSTNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAAST---- 1382
            N      SGS  +PV    +TNA+ VQSP  AVT L   +S     PV +  A +T    
Sbjct: 359  NPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 1383 -----SDIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIA 1547
                 S  +     GAS QD+EEA+KGMA AGK+NVTP EEK  ++E LVYANKQEAK A
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1548 FKALLESANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVR 1727
            FK+LLESANV+SDW WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK EAEERR+R
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1728 QKKAREEFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXX 1907
            QKKAREEF KMLEESKELTSS RW KA  +FENDER+KAV+RARDRED+FEN+ ++L   
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1908 XXXXXXXXXXXNIMEYKQFLESCDFIKPSSQWRKVQDRLEDDERCSRLEKIDRLDIFXXX 2087
                       NI EY++FLESCDFIK +SQWRKVQDRLEDDERCSRLEKIDRL +F   
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDY 658

Query: 2088 XXXXXXXXXXXXXXXXXXXXXAERKNRDEFRKLMEEHV 2201
                                 AERKNRD FRKLM+EHV
Sbjct: 659  IHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHV 696


>ref|XP_007018443.1| Pre-mRNA-processing protein 40A isoform 8 [Theobroma cacao]
            gi|508723771|gb|EOY15668.1| Pre-mRNA-processing protein
            40A isoform 8 [Theobroma cacao]
          Length = 789

 Score =  657 bits (1694), Expect = 0.0
 Identities = 371/700 (53%), Positives = 433/700 (61%), Gaps = 28/700 (4%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQ 365
            M +NSQ S  QP WPP VGS GP Q++G P+S QFRPV   QQGQ F+P  S+QFRPVGQ
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGP-QSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ 59

Query: 366  GMPVPNVG-PSPQNQQLPFPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQ 542
             +P  NVG P+ QNQQ+ F   M                +Q + +PF Q NRP+TS SPQ
Sbjct: 60   -VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 543  PHQ-----NNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPAS 707
             HQ     N+               Y++ PS +GQ QNN++ASS +QP SQ+H  VAP +
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 708  GQTWLPSG--PVATAMQGQQSSATPAAVPATNLQPNPSIQL---SSDWQEHTSTDGRRYY 872
            GQ WL SG   V+ A+  QQ+   P  + + +   N  I     +SDWQEHTS DGRRYY
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRYY 238

Query: 873  YNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXX 1052
            YNKKT+QSSWEKP+ELMTPIERADAST WKEFT  +GRKYYYNKVTK SKWTIPEELK  
Sbjct: 239  YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 298

Query: 1053 XXXXXXXXXXXXXXXXXXXXXPQESLTIP---LPEAXXXXXXXXXXXXXXXXXXXXXXXX 1223
                                    +  +    +P A                        
Sbjct: 299  REQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVA 358

Query: 1224 NQPTIAASGSPSLPV---LSTNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAAST---- 1382
            N      SGS  +PV    +TNA+ VQSP  AVT L   +S     PV +  A +T    
Sbjct: 359  NPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 1383 -----SDIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIA 1547
                 S  +     GAS QD+EEA+KGMA AGK+NVTP EEK  ++E LVYANKQEAK A
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1548 FKALLESANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVR 1727
            FK+LLESANV+SDW WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK EAEERR+R
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1728 QKKAREEFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXX 1907
            QKKAREEF KMLEESKELTSS RW KA  +FENDER+KAV+RARDRED+FEN+ ++L   
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1908 XXXXXXXXXXXNIMEYKQFLESCDFIKPSSQWRKVQDRLEDDERCSRLEKIDRLDIF--X 2081
                       NI EY++FLESCDFIK +SQWRKVQDRLEDDERCSRLEKIDRL +F   
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKANSQWRKVQDRLEDDERCSRLEKIDRLVMFQDY 658

Query: 2082 XXXXXXXXXXXXXXXXXXXXXXXAERKNRDEFRKLMEEHV 2201
                                   AERKNRD FRKLM+EHV
Sbjct: 659  IHDLEKEEEEKKKMQKVEEQLRRAERKNRDAFRKLMDEHV 698


>ref|XP_007018441.1| Pre-mRNA-processing protein 40A isoform 6 [Theobroma cacao]
            gi|508723769|gb|EOY15666.1| Pre-mRNA-processing protein
            40A isoform 6 [Theobroma cacao]
          Length = 774

 Score =  654 bits (1687), Expect = 0.0
 Identities = 371/707 (52%), Positives = 433/707 (61%), Gaps = 35/707 (4%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQ 365
            M +NSQ S  QP WPP VGS GP Q++G P+S QFRPV   QQGQ F+P  S+QFRPVGQ
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGP-QSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ 59

Query: 366  GMPVPNVG-PSPQNQQLPFPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQ 542
             +P  NVG P+ QNQQ+ F   M                +Q + +PF Q NRP+TS SPQ
Sbjct: 60   -VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 543  PHQ-----NNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPAS 707
             HQ     N+               Y++ PS +GQ QNN++ASS +QP SQ+H  VAP +
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 708  GQTWLPSG--PVATAMQGQQSSATPAAVPATNLQPNPSIQL---SSDWQEHTSTDGRRYY 872
            GQ WL SG   V+ A+  QQ+   P  + + +   N  I     +SDWQEHTS DGRRYY
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRYY 238

Query: 873  YNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXX 1052
            YNKKT+QSSWEKP+ELMTPIERADAST WKEFT  +GRKYYYNKVTK SKWTIPEELK  
Sbjct: 239  YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 298

Query: 1053 XXXXXXXXXXXXXXXXXXXXXPQESLTIP---LPEAXXXXXXXXXXXXXXXXXXXXXXXX 1223
                                    +  +    +P A                        
Sbjct: 299  REQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVA 358

Query: 1224 NQPTIAASGSPSLPV---LSTNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAAST---- 1382
            N      SGS  +PV    +TNA+ VQSP  AVT L   +S     PV +  A +T    
Sbjct: 359  NPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 1383 -----SDIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIA 1547
                 S  +     GAS QD+EEA+KGMA AGK+NVTP EEK  ++E LVYANKQEAK A
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1548 FKALLESANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVR 1727
            FK+LLESANV+SDW WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK EAEERR+R
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1728 QKKAREEFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXX 1907
            QKKAREEF KMLEESKELTSS RW KA  +FENDER+KAV+RARDRED+FEN+ ++L   
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1908 XXXXXXXXXXXNIMEYKQFLESCDFIK---------PSSQWRKVQDRLEDDERCSRLEKI 2060
                       NI EY++FLESCDFIK          +SQWRKVQDRLEDDERCSRLEKI
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKI 658

Query: 2061 DRLDIFXXXXXXXXXXXXXXXXXXXXXXXXAERKNRDEFRKLMEEHV 2201
            DRL +F                        AERKNRD FRKLM+EHV
Sbjct: 659  DRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHV 705


>ref|XP_007018440.1| Pre-mRNA-processing protein 40A isoform 5 [Theobroma cacao]
            gi|508723768|gb|EOY15665.1| Pre-mRNA-processing protein
            40A isoform 5 [Theobroma cacao]
          Length = 904

 Score =  654 bits (1687), Expect = 0.0
 Identities = 371/707 (52%), Positives = 433/707 (61%), Gaps = 35/707 (4%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQ 365
            M +NSQ S  QP WPP VGS GP Q++G P+S QFRPV   QQGQ F+P  S+QFRPVGQ
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGP-QSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ 59

Query: 366  GMPVPNVG-PSPQNQQLPFPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQ 542
             +P  NVG P+ QNQQ+ F   M                +Q + +PF Q NRP+TS SPQ
Sbjct: 60   -VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 543  PHQ-----NNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPAS 707
             HQ     N+               Y++ PS +GQ QNN++ASS +QP SQ+H  VAP +
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 708  GQTWLPSG--PVATAMQGQQSSATPAAVPATNLQPNPSIQL---SSDWQEHTSTDGRRYY 872
            GQ WL SG   V+ A+  QQ+   P  + + +   N  I     +SDWQEHTS DGRRYY
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRYY 238

Query: 873  YNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXX 1052
            YNKKT+QSSWEKP+ELMTPIERADAST WKEFT  +GRKYYYNKVTK SKWTIPEELK  
Sbjct: 239  YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 298

Query: 1053 XXXXXXXXXXXXXXXXXXXXXPQESLTIP---LPEAXXXXXXXXXXXXXXXXXXXXXXXX 1223
                                    +  +    +P A                        
Sbjct: 299  REQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVA 358

Query: 1224 NQPTIAASGSPSLPV---LSTNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAAST---- 1382
            N      SGS  +PV    +TNA+ VQSP  AVT L   +S     PV +  A +T    
Sbjct: 359  NPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 1383 -----SDIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIA 1547
                 S  +     GAS QD+EEA+KGMA AGK+NVTP EEK  ++E LVYANKQEAK A
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1548 FKALLESANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVR 1727
            FK+LLESANV+SDW WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK EAEERR+R
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1728 QKKAREEFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXX 1907
            QKKAREEF KMLEESKELTSS RW KA  +FENDER+KAV+RARDRED+FEN+ ++L   
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1908 XXXXXXXXXXXNIMEYKQFLESCDFIK---------PSSQWRKVQDRLEDDERCSRLEKI 2060
                       NI EY++FLESCDFIK          +SQWRKVQDRLEDDERCSRLEKI
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKI 658

Query: 2061 DRLDIFXXXXXXXXXXXXXXXXXXXXXXXXAERKNRDEFRKLMEEHV 2201
            DRL +F                        AERKNRD FRKLM+EHV
Sbjct: 659  DRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHV 705


>ref|XP_007018439.1| Pre-mRNA-processing protein 40A isoform 4 [Theobroma cacao]
            gi|508723767|gb|EOY15664.1| Pre-mRNA-processing protein
            40A isoform 4 [Theobroma cacao]
          Length = 844

 Score =  654 bits (1687), Expect = 0.0
 Identities = 371/707 (52%), Positives = 433/707 (61%), Gaps = 35/707 (4%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQ 365
            M +NSQ S  QP WPP VGS GP Q++G P+S QFRPV   QQGQ F+P  S+QFRPVGQ
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGP-QSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ 59

Query: 366  GMPVPNVG-PSPQNQQLPFPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQ 542
             +P  NVG P+ QNQQ+ F   M                +Q + +PF Q NRP+TS SPQ
Sbjct: 60   -VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 543  PHQ-----NNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPAS 707
             HQ     N+               Y++ PS +GQ QNN++ASS +QP SQ+H  VAP +
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 708  GQTWLPSG--PVATAMQGQQSSATPAAVPATNLQPNPSIQL---SSDWQEHTSTDGRRYY 872
            GQ WL SG   V+ A+  QQ+   P  + + +   N  I     +SDWQEHTS DGRRYY
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRYY 238

Query: 873  YNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXX 1052
            YNKKT+QSSWEKP+ELMTPIERADAST WKEFT  +GRKYYYNKVTK SKWTIPEELK  
Sbjct: 239  YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 298

Query: 1053 XXXXXXXXXXXXXXXXXXXXXPQESLTIP---LPEAXXXXXXXXXXXXXXXXXXXXXXXX 1223
                                    +  +    +P A                        
Sbjct: 299  REQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVA 358

Query: 1224 NQPTIAASGSPSLPV---LSTNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAAST---- 1382
            N      SGS  +PV    +TNA+ VQSP  AVT L   +S     PV +  A +T    
Sbjct: 359  NPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 1383 -----SDIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIA 1547
                 S  +     GAS QD+EEA+KGMA AGK+NVTP EEK  ++E LVYANKQEAK A
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1548 FKALLESANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVR 1727
            FK+LLESANV+SDW WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK EAEERR+R
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1728 QKKAREEFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXX 1907
            QKKAREEF KMLEESKELTSS RW KA  +FENDER+KAV+RARDRED+FEN+ ++L   
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1908 XXXXXXXXXXXNIMEYKQFLESCDFIK---------PSSQWRKVQDRLEDDERCSRLEKI 2060
                       NI EY++FLESCDFIK          +SQWRKVQDRLEDDERCSRLEKI
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKI 658

Query: 2061 DRLDIFXXXXXXXXXXXXXXXXXXXXXXXXAERKNRDEFRKLMEEHV 2201
            DRL +F                        AERKNRD FRKLM+EHV
Sbjct: 659  DRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHV 705


>ref|XP_007018438.1| Pre-mRNA-processing protein 40A isoform 3 [Theobroma cacao]
            gi|508723766|gb|EOY15663.1| Pre-mRNA-processing protein
            40A isoform 3 [Theobroma cacao]
          Length = 1041

 Score =  654 bits (1687), Expect = 0.0
 Identities = 371/707 (52%), Positives = 433/707 (61%), Gaps = 35/707 (4%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQ 365
            M +NSQ S  QP WPP VGS GP Q++G P+S QFRPV   QQGQ F+P  S+QFRPVGQ
Sbjct: 1    MANNSQPSSAQPHWPPAVGSLGP-QSYGSPLSSQFRPVVPMQQGQHFVPAASQQFRPVGQ 59

Query: 366  GMPVPNVG-PSPQNQQLPFPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQ 542
             +P  NVG P+ QNQQ+ F   M                +Q + +PF Q NRP+TS SPQ
Sbjct: 60   -VPSSNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSAPSAQPMHVPFGQTNRPLTSGSPQ 118

Query: 543  PHQ-----NNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPAS 707
             HQ     N+               Y++ PS +GQ QNN++ASS +QP SQ+H  VAP +
Sbjct: 119  SHQTAPPLNSHMPGLGAPGMPPSSSYSYVPSSFGQPQNNVSASSQFQPTSQVHASVAPVA 178

Query: 708  GQTWLPSG--PVATAMQGQQSSATPAAVPATNLQPNPSIQL---SSDWQEHTSTDGRRYY 872
            GQ WL SG   V+ A+  QQ+   P  + + +   N  I     +SDWQEHTS DGRRYY
Sbjct: 179  GQPWLSSGNQSVSLAIPIQQTGQQPPLISSADTAANAPIHTPPSASDWQEHTSADGRRYY 238

Query: 873  YNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXX 1052
            YNKKT+QSSWEKP+ELMTPIERADAST WKEFT  +GRKYYYNKVTK SKWTIPEELK  
Sbjct: 239  YNKKTRQSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 298

Query: 1053 XXXXXXXXXXXXXXXXXXXXXPQESLTIP---LPEAXXXXXXXXXXXXXXXXXXXXXXXX 1223
                                    +  +    +P A                        
Sbjct: 299  REQAQVVASQGAPSDTGVASQAPVAGAVSSAEMPAAAIPVSSNTSQASSPVSVTPVAAVA 358

Query: 1224 NQPTIAASGSPSLPV---LSTNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAAST---- 1382
            N      SGS  +PV    +TNA+ VQSP  AVT L   +S     PV +  A +T    
Sbjct: 359  NPSPTLVSGSTVVPVSQSAATNASEVQSPAVAVTPLPAVSSGGSTTPVTSVNANTTMIRS 418

Query: 1383 -----SDIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIA 1547
                 S  +     GAS QD+EEA+KGMA AGK+NVTP EEK  ++E LVYANKQEAK A
Sbjct: 419  LESTASQDSVHFTNGASAQDIEEAKKGMATAGKVNVTPVEEKVPDDEPLVYANKQEAKNA 478

Query: 1548 FKALLESANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVR 1727
            FK+LLESANV+SDW WEQ MR IINDKRYGALKTLGERKQAFNEYLGQRKK EAEERR+R
Sbjct: 479  FKSLLESANVQSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMR 538

Query: 1728 QKKAREEFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXX 1907
            QKKAREEF KMLEESKELTSS RW KA  +FENDER+KAV+RARDRED+FEN+ ++L   
Sbjct: 539  QKKAREEFTKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVELERK 598

Query: 1908 XXXXXXXXXXXNIMEYKQFLESCDFIK---------PSSQWRKVQDRLEDDERCSRLEKI 2060
                       NI EY++FLESCDFIK          +SQWRKVQDRLEDDERCSRLEKI
Sbjct: 599  ERENAAEEKRRNIAEYRKFLESCDFIKVQHFQKRIQANSQWRKVQDRLEDDERCSRLEKI 658

Query: 2061 DRLDIFXXXXXXXXXXXXXXXXXXXXXXXXAERKNRDEFRKLMEEHV 2201
            DRL +F                        AERKNRD FRKLM+EHV
Sbjct: 659  DRLVMFQDYIHDLEKEEEEKKKMQKEQLRRAERKNRDAFRKLMDEHV 705


>ref|XP_007227030.1| hypothetical protein PRUPE_ppa000697mg [Prunus persica]
            gi|462423966|gb|EMJ28229.1| hypothetical protein
            PRUPE_ppa000697mg [Prunus persica]
          Length = 1031

 Score =  602 bits (1552), Expect = e-169
 Identities = 357/711 (50%), Positives = 420/711 (59%), Gaps = 38/711 (5%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQ 365
            M +N QSS  QP  PP V S GP Q+FG   S+Q+RPV   QQGQ FI   S+QF+PVGQ
Sbjct: 1    MANNPQSSAAQPFRPPPVASLGP-QSFGSSPSLQYRPVVPTQQGQQFIQSASQQFQPVGQ 59

Query: 366  GMPVPNVG-PSPQNQQLPFPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQ 542
            G+P  NVG P+ Q+QQL F   M                SQA+ M ++Q  RPITS   Q
Sbjct: 60   GIPSSNVGMPASQSQQLQFSQPMQPYPLRPSQPGHATPSSQALPMQYMQ-TRPITSAPSQ 118

Query: 543  PHQ-----NNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPAS 707
              Q     NNQ              Y FAP  Y Q QNN+++SS +QPISQ+   V+  +
Sbjct: 119  SQQPALPFNNQMPGLAGGGMPYSSSYIFAPPSYAQPQNNVSSSSQFQPISQVQAHVS-VT 177

Query: 708  GQTWLPSG------PVATAMQGQQSSATPAAVPATNLQPNPSIQLSSDWQEHTSTDGRRY 869
            GQ W+ SG      P      GQQ S+T     A N+ P+ + Q SSDWQEHTS DGRRY
Sbjct: 178  GQPWVSSGNQGAAVPTPVPQSGQQPSSTTFTDSAVNV-PSQTQQSSSDWQEHTSGDGRRY 236

Query: 870  YYNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKX 1049
            Y+N++TKQSSWEKP+ELMTP+ERADAST WKE+T+SDG+KYYYNK        +  E K 
Sbjct: 237  YFNRRTKQSSWEKPLELMTPMERADASTVWKEYTSSDGKKYYYNK--------VTRESKW 288

Query: 1050 XXXXXXXXXXXXXXXXXXXXXXPQESLTIPLPEAXXXXXXXXXXXXXXXXXXXXXXXXNQ 1229
                                   + +LT   P A                          
Sbjct: 289  TIPEELKLAREQAQRELAQGTRSEMNLTSHAPPAVASAETPMGSSSVGPSTSSALPGMVS 348

Query: 1230 PTIA-------ASGSPSLPVLSTNAAGVQS----------PVAAVTTLSNSTSRDGGVPV 1358
              +A       ++ SP  P  S+ A+G QS          PV  VT    S S   GVP 
Sbjct: 349  SPVAVIPVSSFSNPSPIAPTGSSVASGAQSSITGGVGIQPPVVTVTPPPASVSGSTGVPP 408

Query: 1359 ATTPAAS---------TSDIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEET 1511
                A +         TS    S D GA  QD+EEA++GMAVAGK+NVTPSEEK V+EE 
Sbjct: 409  TLVNAITKSVSTFENVTSQDIGSADDGAFTQDIEEAKRGMAVAGKVNVTPSEEKTVDEEP 468

Query: 1512 LVYANKQEAKIAFKALLESANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQ 1691
            LVYA+KQEAK AFKALLESANV SDW WEQ MR IINDKRYGALKTLGERKQAFNEYLGQ
Sbjct: 469  LVYASKQEAKNAFKALLESANVHSDWTWEQTMREIINDKRYGALKTLGERKQAFNEYLGQ 528

Query: 1692 RKKQEAEERRVRQKKAREEFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDRED 1871
            RKK E EERR+RQKKAREEF+KMLEESKEL S+TRW KA+ MFENDER+KAV+RARDRED
Sbjct: 529  RKKLENEERRMRQKKAREEFSKMLEESKELMSATRWSKAVSMFENDERFKAVERARDRED 588

Query: 1872 IFENFTLDLXXXXXXXXXXXXXXNIMEYKQFLESCDFIKPSSQWRKVQDRLEDDERCSRL 2051
            ++E++ ++L              NI EY++FLESCDFIK +SQWRKVQDRLEDDERC RL
Sbjct: 589  LYESYIVELERKEKEKAAEDHKQNIAEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRL 648

Query: 2052 EKIDRLDIFXXXXXXXXXXXXXXXXXXXXXXXXAERKNRDEFRKLMEEHVA 2204
            EK+DRL IF                         ERKNRDEFRKLMEEHVA
Sbjct: 649  EKLDRLLIFQDYIRDLEKEEEEQKKIQKEQLRRVERKNRDEFRKLMEEHVA 699


>ref|XP_006827042.1| hypothetical protein AMTR_s00010p00227470 [Amborella trichopoda]
            gi|548831471|gb|ERM94279.1| hypothetical protein
            AMTR_s00010p00227470 [Amborella trichopoda]
          Length = 985

 Score =  601 bits (1550), Expect = e-169
 Identities = 346/669 (51%), Positives = 403/669 (60%), Gaps = 17/669 (2%)
 Frame = +3

Query: 249  GPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQGMPVPNVG-PSP-QNQQLPFP 422
            G PQN+G PMSMQFRP+   QQ QPFI   S+QFRPVGQG+P  N+G PSP Q QQ  + 
Sbjct: 4    GGPQNYGTPMSMQFRPMVPTQQSQPFISAPSQQFRPVGQGIPASNIGSPSPVQAQQAQYA 63

Query: 423  PSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQPHQNNQHXXXXXXXXXXXXX 602
              M                 Q + + ++Q NRP+TS   Q  QN QH             
Sbjct: 64   LGMQQLPPRPAQTAQVAPSPQTVPLSYIQPNRPMTSGPLQIPQNPQHVNIHPPGLGGPGT 123

Query: 603  -----YTF-APSPYGQSQNNINASSHYQPISQMHTGVAPAS--GQTWLPSGPVATAM--- 749
                 YTF APS Y   QNNIN SS YQP SQM     P+   GQ WL SG  +T +   
Sbjct: 124  VLSSSYTFTAPSSYVHPQNNINISSQYQPSSQMQVPGVPSGSGGQPWLSSGSQSTTVIPP 183

Query: 750  ---QGQQSSATPAAVPATNLQPNPSIQLSSDWQEHTSTDGRRYYYNKKTKQSSWEKPVEL 920
                 QQSS   +  P    QPNP+ Q SSDWQEHTS DGRRYYYNKKT+QSSWEKP+EL
Sbjct: 184  VVQASQQSSFAASTAPVATPQPNPTSQSSSDWQEHTSADGRRYYYNKKTRQSSWEKPLEL 243

Query: 921  MTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXXXXXXXXXXXXXXXXXX 1100
            MTPIERADAST WKEFT  +GRKYYYNKVTK SKWTIP+ELK                  
Sbjct: 244  MTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPDELKLAREQAEKNGTQLTNSET 303

Query: 1101 XXXXXPQESLTIPLPEAXXXXXXXXXXXXXXXXXXXXXXXXNQPTIAASGSPSLPVLSTN 1280
                     +T+ +P                               + SG  + PVL T 
Sbjct: 304  TDVVASSTPVTVTVP------------LTEMPSTVAAISATQSAMPSTSGMATSPVLVTP 351

Query: 1281 AAGVQSPVAAVTTLSNSTSRDGGVPVATTPAASTSDIANSLDGGASVQDLEEARKGMAVA 1460
               V  P AAV   S   + +  + V      S + +A+      S QDLEEARK M VA
Sbjct: 352  VVSV--PAAAVDPSSAGAAYEK-IKVDNVSPESIAQVADE----TSAQDLEEARKAMPVA 404

Query: 1461 GKINVTP-SEEKAVEEETLVYANKQEAKIAFKALLESANVESDWNWEQAMRVIINDKRYG 1637
            GK+N+TP S+EK V+EE LV+A+KQEAK AFK LL SA+VESDW W+QAMRVIINDKRYG
Sbjct: 405  GKVNITPTSDEKTVDEEPLVFASKQEAKNAFKELLVSAHVESDWTWDQAMRVIINDKRYG 464

Query: 1638 ALKTLGERKQAFNEYLGQRKKQEAEERRVRQKKAREEFAKMLEESKELTSSTRWPKAMIM 1817
            ALKTLGERKQAFNEYLGQRKK EAEE+R RQKKARE+F KMLEESKELTS+T+W KA+ M
Sbjct: 465  ALKTLGERKQAFNEYLGQRKKLEAEEKRTRQKKAREDFVKMLEESKELTSATKWSKAITM 524

Query: 1818 FENDERYKAVDRARDREDIFENFTLDLXXXXXXXXXXXXXXNIMEYKQFLESCDFIKPSS 1997
            FE+DER++AV+R RDRE++FE    +L              N+ EY+ FLESCDFIK SS
Sbjct: 525  FEDDERFRAVERGRDREELFEMHLEELHRKERAKAQEEHRRNVQEYRAFLESCDFIKASS 584

Query: 1998 QWRKVQDRLEDDERCSRLEKIDRLDIFXXXXXXXXXXXXXXXXXXXXXXXXAERKNRDEF 2177
            QWRKVQDRLEDDERC+RLEKIDRL+IF                        AERKNRD+F
Sbjct: 585  QWRKVQDRLEDDERCARLEKIDRLEIFQEYIRDLEKEEEEQRKLQKEHLRRAERKNRDDF 644

Query: 2178 RKLMEEHVA 2204
            RKLME H+A
Sbjct: 645  RKLMEGHIA 653


>ref|XP_006343435.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X3 [Solanum
            tuberosum]
          Length = 864

 Score =  585 bits (1509), Expect = e-164
 Identities = 353/693 (50%), Positives = 409/693 (59%), Gaps = 20/693 (2%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPP--GSEQFRPV 359
            M SN   SG QPLWPP VGS  PPQ FG    MQFRP  S QQGQ F PP   S Q+RPV
Sbjct: 1    MASNPPPSGPQPLWPPSVGST-PPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPV 58

Query: 360  GQGMPVPNVGPSPQNQQLP-FPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSES 536
            GQ    PN G  P   Q+P F  +M                SQAIQM ++Q      S  
Sbjct: 59   GQ---TPNAGMPPGQGQIPQFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQ------SSI 109

Query: 537  PQPHQNNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPASGQT 716
            PQP Q N                +  P   G   N  ++S   Q  SQMH    PA GQT
Sbjct: 110  PQPQQVNPPLN------------SHMPGVSGAG-NPFSSSYTVQSSSQMHGPTFPAGGQT 156

Query: 717  WLPSG----PVA--TAMQGQQSSATPAAVPATNLQPNPSIQLSSDWQEHTSTDGRRYYYN 878
            WL SG    PVA  T     Q SA   AVPA+      S Q +SDWQE+ + DGRRYYYN
Sbjct: 157  WLSSGSQTTPVAAPTPPSSHQLSAVAPAVPASTA----SQQTASDWQEYEAADGRRYYYN 212

Query: 879  KKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXXXX 1058
            K TKQSSWEKP+ELMTP+ERADAST WKEFT +DGRKYYYNK TK SKWTIP+ELK    
Sbjct: 213  KNTKQSSWEKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARE 272

Query: 1059 XXXXXXXXXXXXXXXXXXX--------PQESLTIPLPEAXXXXXXXXXXXXXXXXXXXXX 1214
                                       P E  +   P +                     
Sbjct: 273  LAENAAGQVVQTGTSTNSGVQVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAV 332

Query: 1215 XXXNQPTIAASGSPSLPVLS---TNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAASTS 1385
               N P +  SGS ++P +S   T++AGV SP  + +T S + +      ++     S  
Sbjct: 333  SDVNTPPLVVSGSSAIPSVSLAVTSSAGVSSPAVSGSTESAALANAYQTQMSGIENLSPQ 392

Query: 1386 DIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIAFKALLE 1565
             +A+SL G AS QD+EEA+KGMAVAGKINV P+EEK+ +EE  +YA KQEAK AFKALLE
Sbjct: 393  -VASSLSG-ASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALLE 450

Query: 1566 SANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVRQKKARE 1745
            SANVESDW WEQ MRVIINDKRYGALKTLGERKQAFNEYL QRKKQEAEERR+RQ+KA+E
Sbjct: 451  SANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKE 510

Query: 1746 EFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXXXXXXXX 1925
            EF KMLEESKELTSSTRW KA+ MFE+DER+KAV+R  DRED+F N+ +DL         
Sbjct: 511  EFTKMLEESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQ 570

Query: 1926 XXXXXNIMEYKQFLESCDFIKPSSQWRKVQDRLEDDERCSRLEKIDRLDIFXXXXXXXXX 2105
                 N +EYKQFLE+C FIK  +QWRKVQD LEDDERCSRLEK+DRL+IF         
Sbjct: 571  EEYRRNRLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEK 630

Query: 2106 XXXXXXXXXXXXXXXAERKNRDEFRKLMEEHVA 2204
                           AERKNRD FRK++EEH+A
Sbjct: 631  EDEEQRKLQKEQLRRAERKNRDAFRKMIEEHIA 663


>ref|XP_006343434.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X2 [Solanum
            tuberosum]
          Length = 872

 Score =  585 bits (1509), Expect = e-164
 Identities = 353/693 (50%), Positives = 409/693 (59%), Gaps = 20/693 (2%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPP--GSEQFRPV 359
            M SN   SG QPLWPP VGS  PPQ FG    MQFRP  S QQGQ F PP   S Q+RPV
Sbjct: 1    MASNPPPSGPQPLWPPSVGST-PPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPV 58

Query: 360  GQGMPVPNVGPSPQNQQLP-FPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSES 536
            GQ    PN G  P   Q+P F  +M                SQAIQM ++Q      S  
Sbjct: 59   GQ---TPNAGMPPGQGQIPQFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQ------SSI 109

Query: 537  PQPHQNNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPASGQT 716
            PQP Q N                +  P   G   N  ++S   Q  SQMH    PA GQT
Sbjct: 110  PQPQQVNPPLN------------SHMPGVSGAG-NPFSSSYTVQSSSQMHGPTFPAGGQT 156

Query: 717  WLPSG----PVA--TAMQGQQSSATPAAVPATNLQPNPSIQLSSDWQEHTSTDGRRYYYN 878
            WL SG    PVA  T     Q SA   AVPA+      S Q +SDWQE+ + DGRRYYYN
Sbjct: 157  WLSSGSQTTPVAAPTPPSSHQLSAVAPAVPASTA----SQQTASDWQEYEAADGRRYYYN 212

Query: 879  KKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXXXX 1058
            K TKQSSWEKP+ELMTP+ERADAST WKEFT +DGRKYYYNK TK SKWTIP+ELK    
Sbjct: 213  KNTKQSSWEKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARE 272

Query: 1059 XXXXXXXXXXXXXXXXXXX--------PQESLTIPLPEAXXXXXXXXXXXXXXXXXXXXX 1214
                                       P E  +   P +                     
Sbjct: 273  LAENAAGQVVQTGTSTNSGVQVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAV 332

Query: 1215 XXXNQPTIAASGSPSLPVLS---TNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAASTS 1385
               N P +  SGS ++P +S   T++AGV SP  + +T S + +      ++     S  
Sbjct: 333  SDVNTPPLVVSGSSAIPSVSLAVTSSAGVSSPAVSGSTESAALANAYQTQMSGIENLSPQ 392

Query: 1386 DIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIAFKALLE 1565
             +A+SL G AS QD+EEA+KGMAVAGKINV P+EEK+ +EE  +YA KQEAK AFKALLE
Sbjct: 393  -VASSLSG-ASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALLE 450

Query: 1566 SANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVRQKKARE 1745
            SANVESDW WEQ MRVIINDKRYGALKTLGERKQAFNEYL QRKKQEAEERR+RQ+KA+E
Sbjct: 451  SANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKE 510

Query: 1746 EFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXXXXXXXX 1925
            EF KMLEESKELTSSTRW KA+ MFE+DER+KAV+R  DRED+F N+ +DL         
Sbjct: 511  EFTKMLEESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQ 570

Query: 1926 XXXXXNIMEYKQFLESCDFIKPSSQWRKVQDRLEDDERCSRLEKIDRLDIFXXXXXXXXX 2105
                 N +EYKQFLE+C FIK  +QWRKVQD LEDDERCSRLEK+DRL+IF         
Sbjct: 571  EEYRRNRLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEK 630

Query: 2106 XXXXXXXXXXXXXXXAERKNRDEFRKLMEEHVA 2204
                           AERKNRD FRK++EEH+A
Sbjct: 631  EDEEQRKLQKEQLRRAERKNRDAFRKMIEEHIA 663


>ref|XP_006343433.1| PREDICTED: pre-mRNA-processing protein 40A-like isoform X1 [Solanum
            tuberosum]
          Length = 1031

 Score =  585 bits (1509), Expect = e-164
 Identities = 353/693 (50%), Positives = 409/693 (59%), Gaps = 20/693 (2%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPP--GSEQFRPV 359
            M SN   SG QPLWPP VGS  PPQ FG    MQFRP  S QQGQ F PP   S Q+RPV
Sbjct: 1    MASNPPPSGPQPLWPPSVGST-PPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPV 58

Query: 360  GQGMPVPNVGPSPQNQQLP-FPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSES 536
            GQ    PN G  P   Q+P F  +M                SQAIQM ++Q      S  
Sbjct: 59   GQ---TPNAGMPPGQGQIPQFSQTMQQFPPRPGQSGHGTPSSQAIQMSYIQ------SSI 109

Query: 537  PQPHQNNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPASGQT 716
            PQP Q N                +  P   G   N  ++S   Q  SQMH    PA GQT
Sbjct: 110  PQPQQVNPPLN------------SHMPGVSGAG-NPFSSSYTVQSSSQMHGPTFPAGGQT 156

Query: 717  WLPSG----PVA--TAMQGQQSSATPAAVPATNLQPNPSIQLSSDWQEHTSTDGRRYYYN 878
            WL SG    PVA  T     Q SA   AVPA+      S Q +SDWQE+ + DGRRYYYN
Sbjct: 157  WLSSGSQTTPVAAPTPPSSHQLSAVAPAVPASTA----SQQTASDWQEYEAADGRRYYYN 212

Query: 879  KKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXXXX 1058
            K TKQSSWEKP+ELMTP+ERADAST WKEFT +DGRKYYYNK TK SKWTIP+ELK    
Sbjct: 213  KNTKQSSWEKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTIPDELKLARE 272

Query: 1059 XXXXXXXXXXXXXXXXXXX--------PQESLTIPLPEAXXXXXXXXXXXXXXXXXXXXX 1214
                                       P E  +   P +                     
Sbjct: 273  LAENAAGQVVQTGTSTNSGVQVSEAVTPAEQPSAVTPVSSTPSSTVSGVASSPVPVTPAV 332

Query: 1215 XXXNQPTIAASGSPSLPVLS---TNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAASTS 1385
               N P +  SGS ++P +S   T++AGV SP  + +T S + +      ++     S  
Sbjct: 333  SDVNTPPLVVSGSSAIPSVSLAVTSSAGVSSPAVSGSTESAALANAYQTQMSGIENLSPQ 392

Query: 1386 DIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIAFKALLE 1565
             +A+SL G AS QD+EEA+KGMAVAGKINV P+EEK+ +EE  +YA KQEAK AFKALLE
Sbjct: 393  -VASSLSG-ASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKNAFKALLE 450

Query: 1566 SANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVRQKKARE 1745
            SANVESDW WEQ MRVIINDKRYGALKTLGERKQAFNEYL QRKKQEAEERR+RQ+KA+E
Sbjct: 451  SANVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKE 510

Query: 1746 EFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXXXXXXXX 1925
            EF KMLEESKELTSSTRW KA+ MFE+DER+KAV+R  DRED+F N+ +DL         
Sbjct: 511  EFTKMLEESKELTSSTRWSKAVTMFEDDERFKAVEREADREDLFRNYLVDLQKKERSKAQ 570

Query: 1926 XXXXXNIMEYKQFLESCDFIKPSSQWRKVQDRLEDDERCSRLEKIDRLDIFXXXXXXXXX 2105
                 N +EYKQFLE+C FIK  +QWRKVQD LEDDERCSRLEK+DRL+IF         
Sbjct: 571  EEYRRNRLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLEIFQEYIRDLEK 630

Query: 2106 XXXXXXXXXXXXXXXAERKNRDEFRKLMEEHVA 2204
                           AERKNRD FRK++EEH+A
Sbjct: 631  EDEEQRKLQKEQLRRAERKNRDAFRKMIEEHIA 663


>gb|EXC51391.1| Pre-mRNA-processing factor 40-A-like protein [Morus notabilis]
          Length = 994

 Score =  582 bits (1501), Expect = e-163
 Identities = 341/662 (51%), Positives = 403/662 (60%), Gaps = 31/662 (4%)
 Frame = +3

Query: 309  QQGQPFIPPGSEQFRPVGQGMPVPNVGPSPQNQQ-LPFPPSMXXXXXXXXXXXXXXXXSQ 485
            Q GQPFIP  S+QF+PVGQG+P PN+G  P + Q + F   M                SQ
Sbjct: 5    QHGQPFIP-SSQQFQPVGQGIPPPNLGMHPAHSQPVQFSQQMQQYPPRPSQPGHPMPSSQ 63

Query: 486  AIQMPFVQQNRPITSESPQPHQNNQHXXXXXXXXXXXXX------YTFAPSPYGQSQNNI 647
             + M ++Q  RPI   +P P Q+ QH                   Y++APS + Q QNN 
Sbjct: 64   GLPMSYIQ-TRPI---APGPPQSQQHAAPFTNQMPPGGAMPFSSSYSYAPSSFVQPQNNA 119

Query: 648  NASSHYQPISQMHTGVAPASGQTWLPSG-----PVATAMQ-GQQSSATPAAVPATNLQPN 809
            ++ S +Q +SQM    AP  GQ WL SG     PVA   Q GQ  SA  +A  ATN+ P+
Sbjct: 120  SSVSQFQQMSQMQAPTAPGPGQPWLSSGIHSAPPVAPGQQVGQPPSAASSADAATNV-PS 178

Query: 810  PSIQLSSDWQEHTSTDGRRYYYNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRK 989
             + Q SSDWQEHTS+DGRRYYYNK+TKQS W+KPVELMTPIERADAST WKE+++ DGRK
Sbjct: 179  TTQQSSSDWQEHTSSDGRRYYYNKRTKQSVWDKPVELMTPIERADASTVWKEYSSPDGRK 238

Query: 990  YYYNKVTKLSKWTIPEELKXXXXXXXXXXXXXXXXXXXXXXX--------PQESLTIPLP 1145
            YYYNKVTK SKWTIPEELK                                  S   P+ 
Sbjct: 239  YYYNKVTKQSKWTIPEELKLAREQAQKESSQGMQSETGLASHGPVAVGSSEMPSAGTPVA 298

Query: 1146 EAXXXXXXXXXXXXXXXXXXXXXXXXNQPTIAASGSPSLPVLSTNAAGVQSPVAAVTTLS 1325
                                      +     +S +P       +A  VQ P+  VT L+
Sbjct: 299  SGAPLVATGVASSPVAVTPVASLPNSSMTISGSSATPGSQSAVASAVAVQPPMVTVTPLN 358

Query: 1326 NSTSRDGGVPVA-----TTPAAS-----TSDIANSLDGGASVQDLEEARKGMAVAGKINV 1475
             + S   GV  A     TTP  +     + DIA+S+DG AS+ D+EEA+KGMAVAGKINV
Sbjct: 359  PAISGSTGVSPALGNANTTPVRTYDNRVSQDIASSVDG-ASILDIEEAKKGMAVAGKINV 417

Query: 1476 TPSEEKAVEEETLVYANKQEAKIAFKALLESANVESDWNWEQAMRVIINDKRYGALKTLG 1655
            TP EEK V++E LV+ANKQEAK AFK+LLESANV+SDW WEQAMR IINDKRYGALKTLG
Sbjct: 418  TPVEEKPVDDEPLVFANKQEAKNAFKSLLESANVQSDWTWEQAMREIINDKRYGALKTLG 477

Query: 1656 ERKQAFNEYLGQRKKQEAEERRVRQKKAREEFAKMLEESKELTSSTRWPKAMIMFENDER 1835
            ERKQAFNEYLGQRKK EAEERR+RQKKAREEF  MLEESKELTSSTRW KA+ MFENDER
Sbjct: 478  ERKQAFNEYLGQRKKLEAEERRMRQKKAREEFTIMLEESKELTSSTRWSKAVSMFENDER 537

Query: 1836 YKAVDRARDREDIFENFTLDLXXXXXXXXXXXXXXNIMEYKQFLESCDFIKPSSQWRKVQ 2015
            +KAV+RARDRED+FE++ ++L              N  EY++FLESCDFIK +SQWRKVQ
Sbjct: 538  FKAVERARDREDLFESYIVELERKEKEKAAEEHRRNAAEYRKFLESCDFIKVNSQWRKVQ 597

Query: 2016 DRLEDDERCSRLEKIDRLDIFXXXXXXXXXXXXXXXXXXXXXXXXAERKNRDEFRKLMEE 2195
             RLEDDERC RLEK+DRL IF                         ERKNRDEFRKLMEE
Sbjct: 598  VRLEDDERCLRLEKLDRLLIFQDYIRDLEKEEEEQKKIQKEQLRRVERKNRDEFRKLMEE 657

Query: 2196 HV 2201
            H+
Sbjct: 658  HI 659


>ref|XP_002320019.2| FF domain-containing family protein [Populus trichocarpa]
            gi|550323102|gb|EEE98334.2| FF domain-containing family
            protein [Populus trichocarpa]
          Length = 1019

 Score =  580 bits (1495), Expect = e-163
 Identities = 336/679 (49%), Positives = 398/679 (58%), Gaps = 26/679 (3%)
 Frame = +3

Query: 246  AGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQGMPVPNVG-PSPQNQQLPFP 422
            A  PQ+ G     QFRP+   QQGQPFI   S+QFRPVGQGMP  +VG P+ Q+Q L F 
Sbjct: 2    ASNPQSSGG----QFRPMVPTQQGQPFIQVASQQFRPVGQGMPSSHVGMPAAQSQHLQF- 56

Query: 423  PSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQ---PHQNNQHXXXXXXXXXX 593
             S                 +QA+ MP+ Q NRP+TS  PQ   P  +N            
Sbjct: 57   -SQPIQQLPPWPNQPGAPSAQALSMPYGQLNRPLTSSQPQQNAPPLSNHMHVVGTSGVPN 115

Query: 594  XXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPASGQTWLPSG--------PVATAM 749
               Y FAPS +G +QN+ +A   + P+SQMH  V P  GQ WL SG        PV  A+
Sbjct: 116  SSPYAFAPSSFGLTQNSASALPQFPPMSQMHAHVVPMGGQPWLSSGSHGASLVPPVQPAV 175

Query: 750  QGQQSSATPAAVPATNLQPNPSIQLSSDWQEHTSTDGRRYYYNKKTKQSSWEKPVELMTP 929
                 S++  +  A +     S+   SDWQEHT++DGRRYYYN++TKQSSW+KP ELMTP
Sbjct: 176  VQPSISSSSDSTVAVSSNSQQSL---SDWQEHTASDGRRYYYNRRTKQSSWDKPFELMTP 232

Query: 930  IERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXXXXXXXXXXXXXXXXXXXXX 1109
            IERADAST WKEFT  +G+KYYYNKVTK SKW+IPEELK                     
Sbjct: 233  IERADASTVWKEFTTQEGKKYYYNKVTKQSKWSIPEELKMAREQAQQTVGQGNQSETDAA 292

Query: 1110 XXPQESLTIPLPE----AXXXXXXXXXXXXXXXXXXXXXXXXNQPTIAASGSPSLPVLST 1277
                 ++ +   E    A                        N P +  SGSP+LPV  +
Sbjct: 293  SNVPTAVAVTSSETSTTAVSVSSSSVMLPGVSSSPISVTAVANPPPVVVSGSPALPVAHS 352

Query: 1278 NAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAASTS----------DIANSLDGGASVQD 1427
              A       +VT L  + S   G P A   A +TS            ANS+DG AS+ D
Sbjct: 353  TTASAVGVQPSVTPLPTAVSVGTGAPAAAVDAKTTSLSSIDNLLSQSAANSVDG-ASMMD 411

Query: 1428 LEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIAFKALLESANVESDWNWEQAM 1607
              E  K     GK N +P EEK  +EE LV+ANK EAK AFKALLESANV+SDW WEQ M
Sbjct: 412  TAEFNKVSMDMGKTNASPLEEKTPDEEPLVFANKLEAKNAFKALLESANVQSDWTWEQTM 471

Query: 1608 RVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVRQKKAREEFAKMLEESKELTS 1787
            R IINDKRY ALKTLGERKQAFNEYLGQRKK EAEERRVRQKKAREEFAKMLEESKELTS
Sbjct: 472  REIINDKRYAALKTLGERKQAFNEYLGQRKKLEAEERRVRQKKAREEFAKMLEESKELTS 531

Query: 1788 STRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXXXXXXXXXXXXXNIMEYKQFL 1967
            S +W KA+ +FENDERYKA++RARDRED+F+++ +DL              N+ EY++FL
Sbjct: 532  SMKWSKAISLFENDERYKALERARDREDLFDSYIVDLERKEKEKAAEDRRRNVAEYRKFL 591

Query: 1968 ESCDFIKPSSQWRKVQDRLEDDERCSRLEKIDRLDIFXXXXXXXXXXXXXXXXXXXXXXX 2147
            ESCDFIK SSQWRK+QDRLEDDERC  LEK+DRL IF                       
Sbjct: 592  ESCDFIKASSQWRKIQDRLEDDERCLCLEKLDRLLIFQDYIRDLEKEEEEQKKIQKEQLR 651

Query: 2148 XAERKNRDEFRKLMEEHVA 2204
             AERKNRDEFRKL+EEHVA
Sbjct: 652  RAERKNRDEFRKLLEEHVA 670


>ref|XP_004242948.1| PREDICTED: pre-mRNA-processing protein 40A-like [Solanum
            lycopersicum]
          Length = 998

 Score =  569 bits (1466), Expect = e-159
 Identities = 343/693 (49%), Positives = 400/693 (57%), Gaps = 20/693 (2%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPP--GSEQFRPV 359
            M SN   SG QPLWPP VGS  PPQ FG    MQFRP  S QQGQ F PP   S Q+RPV
Sbjct: 1    MASNPPPSGPQPLWPPSVGST-PPQGFGS-FPMQFRPALSTQQGQHFAPPISASPQYRPV 58

Query: 360  GQGMPVPNVGPSPQNQQLP-FPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSES 536
            GQ    PN G  P   Q+P F  +M                SQAIQM + Q      S  
Sbjct: 59   GQ---TPNAGMPPGQGQIPQFSQTMQQFPPRPGQPGHGTPSSQAIQMSYNQ------SSI 109

Query: 537  PQPHQNNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPASGQT 716
             QP Q N                +  P   G   N  ++S   Q  SQMH    PA GQ 
Sbjct: 110  SQPQQVNPPLN------------SHMPGVSGAG-NPFSSSYTVQSSSQMHGPTFPAGGQP 156

Query: 717  WLPSGPVATAM------QGQQSSATPAAVPATNLQPNPSIQLSSDWQEHTSTDGRRYYYN 878
            WL SG   T +         Q  A   AVPA+      S Q +SDWQE+ + DGRRYYYN
Sbjct: 157  WLSSGSQTTPVGDPTPPSSHQLLAVAPAVPASTA----SQQTASDWQEYEAADGRRYYYN 212

Query: 879  KKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXXXX 1058
            K TKQSSWEKP+ELMTP+ERADAST WKEFT +DGRKYYYNK TK SKWT+P+ELK    
Sbjct: 213  KNTKQSSWEKPLELMTPLERADASTVWKEFTTADGRKYYYNKETKQSKWTMPDELKLARE 272

Query: 1059 XXXXXXXXXXXXXXXXXXXPQESLTIP--------LPEAXXXXXXXXXXXXXXXXXXXXX 1214
                                Q S  +          P +                     
Sbjct: 273  LAENVASQVVQTGTSTNSGVQVSEAVTSTEQPSAVTPVSSTPSSTVSGVPSSPVPVTPAV 332

Query: 1215 XXXNQPTIAASGSPSLPVLS---TNAAGVQSPVAAVTTLSNSTSRDGGVPVATTPAASTS 1385
               N P +  SGS ++P +S   T++AG+ SP  +  T S + +      ++     S  
Sbjct: 333  SDVNTPPLVVSGSSAIPTVSFAVTSSAGISSPAVSGNTRSAALANAYQTQMSGIENLSPQ 392

Query: 1386 DIANSLDGGASVQDLEEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIAFKALLE 1565
             +A+SL G AS QD+EEA+KGMAVAGKINV P+EEK+ +EE  +YA KQEAK AFK+LLE
Sbjct: 393  -VASSLSG-ASSQDIEEAKKGMAVAGKINVVPAEEKSADEEPFLYATKQEAKHAFKSLLE 450

Query: 1566 SANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVRQKKARE 1745
            SA VESDW WEQ MRVIINDKRYGALKTLGERKQAFNEYL QRKKQEAEERR+RQ+KA+E
Sbjct: 451  SATVESDWTWEQTMRVIINDKRYGALKTLGERKQAFNEYLMQRKKQEAEERRLRQRKAKE 510

Query: 1746 EFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXXXXXXXX 1925
            EF KMLEESKELTSSTRW KA+ MFE+DER+K V+R  DRED+F N+ +DL         
Sbjct: 511  EFTKMLEESKELTSSTRWSKAVTMFEDDERFKGVEREADREDLFRNYLVDLQKKERSKAQ 570

Query: 1926 XXXXXNIMEYKQFLESCDFIKPSSQWRKVQDRLEDDERCSRLEKIDRLDIFXXXXXXXXX 2105
                 N +EYKQFLE+C FIK  +QWRKVQD LEDDERCSRLEK+DRLDIF         
Sbjct: 571  EEYRRNRLEYKQFLETCGFIKVDTQWRKVQDLLEDDERCSRLEKLDRLDIFQEYIRDLEK 630

Query: 2106 XXXXXXXXXXXXXXXAERKNRDEFRKLMEEHVA 2204
                           AERKNRD FRK++EEH+A
Sbjct: 631  EDEEQRKLQKEQLRRAERKNRDAFRKMIEEHIA 663


>ref|XP_004141297.1| PREDICTED: pre-mRNA-processing protein 40A-like [Cucumis sativus]
          Length = 985

 Score =  566 bits (1458), Expect = e-158
 Identities = 339/678 (50%), Positives = 402/678 (59%), Gaps = 29/678 (4%)
 Frame = +3

Query: 258  QNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQGMPVPNVG-PSPQNQQLPFPPSMX 434
            +N       QFRPV   Q GQ FI   ++QF+  GQ +   NVG P+ Q Q   +P SM 
Sbjct: 2    ENLSQSSGGQFRPVIPAQPGQAFISSSAQQFQLAGQNISSSNVGVPAGQVQPHQYPQSMP 61

Query: 435  XXXXXXXXXXXXXXXSQAIQMPFVQQNRPITSESPQPHQN----NQHXXXXXXXXXXXXX 602
                           SQ IQMP+VQ  RP+TS  PQ  QN    N H             
Sbjct: 62   QLVQRPGHPSYVTPSSQPIQMPYVQ-TRPLTSVPPQSQQNVAAPNNHM------------ 108

Query: 603  YTFAPSPYGQSQNNINASSHY--QPISQMHTGVAPASGQTWLPSGPVATAM-----QGQQ 761
                   +G   + +  SS Y  QP+SQMH  V+  + Q WL S    T +     Q  Q
Sbjct: 109  -------HGLGAHGLPLSSPYTFQPMSQMHAPVSVGNSQPWLSSASQTTNLVSPIDQANQ 161

Query: 762  SSATPAAVPATNLQPNPSIQLSSDWQEHTSTDGRRYYYNKKTKQSSWEKPVELMTPIERA 941
             S+  A  PA N  P  + QLSSDWQEH S DGRRYYYNKKTKQSSWEKP+ELMTP+ERA
Sbjct: 162  HSSVSAVNPAANA-PVFNQQLSSDWQEHASADGRRYYYNKKTKQSSWEKPLELMTPLERA 220

Query: 942  DASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXXXXXXXXXXXXXXXXXXXXXXXPQ 1121
            DAST WKEFT  DGRKYYYNKVTK SKWT+PEELK                       PQ
Sbjct: 221  DASTVWKEFTAPDGRKYYYNKVTKESKWTMPEELKLAREQAQKEATQGTQTDISVMA-PQ 279

Query: 1122 ESLTIPLPEAXXXXXXXXXXXXXXXXXXXXXXXXN-QPTIAASGSPSLPVLSTNAAGVQS 1298
             +L   L  A                           P ++ S SPS+ V  ++A    +
Sbjct: 280  PTLAAGLSHAETPAISSVNSSISPTVSGVATSPVPVTPFVSVSNSPSVMVTGSSAI-TGT 338

Query: 1299 PVAAVTTLSNSTSRD------GGVPVATTPAASTS----------DIANSLDGGASVQDL 1430
            P+A+ T++S + S        G  P A   A ++S          D+ N++DG  S +D+
Sbjct: 339  PIASTTSVSGTVSSQSVAASGGTGPPAVVHANASSVTPFESLASQDVKNTVDG-TSTEDI 397

Query: 1431 EEARKGMAVAGKINVTPSEEKAVEEETLVYANKQEAKIAFKALLESANVESDWNWEQAMR 1610
            EEARKGMAVAGK+N T  EEK+ ++E LV+ANKQEAK AFKALLES NV+SDW WEQAMR
Sbjct: 398  EEARKGMAVAGKVNETVLEEKSADDEPLVFANKQEAKNAFKALLESVNVQSDWTWEQAMR 457

Query: 1611 VIINDKRYGALKTLGERKQAFNEYLGQRKKQEAEERRVRQKKAREEFAKMLEESKELTSS 1790
             IINDKRYGALKTLGERKQAF+EYLG RKK +AEERR+RQKKAREEF KMLEESKELTSS
Sbjct: 458  EIINDKRYGALKTLGERKQAFHEYLGHRKKLDAEERRIRQKKAREEFTKMLEESKELTSS 517

Query: 1791 TRWPKAMIMFENDERYKAVDRARDREDIFENFTLDLXXXXXXXXXXXXXXNIMEYKQFLE 1970
            TRW KA+ MFENDER+KAV+R+RDRED+FE++ ++L              NI EY++FLE
Sbjct: 518  TRWSKAVSMFENDERFKAVERSRDREDLFESYIVELERKEKERAAEEHKKNIAEYRKFLE 577

Query: 1971 SCDFIKPSSQWRKVQDRLEDDERCSRLEKIDRLDIFXXXXXXXXXXXXXXXXXXXXXXXX 2150
            SCD+IK SSQWRKVQDRLEDDERCSRLEK+DRL IF                        
Sbjct: 578  SCDYIKVSSQWRKVQDRLEDDERCSRLEKLDRLLIFQDYIRDLEKEEEDQKKIQKERVRR 637

Query: 2151 AERKNRDEFRKLMEEHVA 2204
             ERKNRDEFRKLMEEH+A
Sbjct: 638  IERKNRDEFRKLMEEHIA 655


>ref|XP_007042685.1| Pre-mRNA-processing protein 40B, putative [Theobroma cacao]
            gi|508706620|gb|EOX98516.1| Pre-mRNA-processing protein
            40B, putative [Theobroma cacao]
          Length = 1025

 Score =  553 bits (1425), Expect = e-154
 Identities = 328/715 (45%), Positives = 409/715 (57%), Gaps = 42/715 (5%)
 Frame = +3

Query: 186  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSEQFRPVGQ 365
            M +N Q SG QP  PP+VGS  PP+NF PPMS QFRPV   QQ Q F+P   + F+PV +
Sbjct: 1    MANNPQFSGVQPHPPPLVGSMDPPRNFPPPMSAQFRPVVPSQQPQQFVPVAPQLFQPVAR 60

Query: 366  GMPVPNVGPSPQNQQLPFPPSMXXXXXXXXXXXXXXXXSQAIQMPFVQQNRPIT--SESP 539
            G+ V N G SPQ QQ  FP  M                +  I +P  Q +  ++  +  P
Sbjct: 61   GVTVMNSGFSPQTQQPQFPQVMQQLPARPVQPGHIPPAALGISLPTAQPHCHVSPGASLP 120

Query: 540  QPH-QNNQHXXXXXXXXXXXXXYTFAPSPYGQSQNNINASSHYQPISQMHTGVAPASGQT 716
            QP+ Q   +             Y FA S YGQ+  + NA + YQP+ Q+        G  
Sbjct: 121  QPNIQTPNNYVSGGPASHLSSSYPFASSSYGQASVSQNAMAQYQPMPQLQAPSVSVGGHV 180

Query: 717  WL-----PSGPVATAMQGQQSSATPAAVPATNLQPNPSIQLSSDWQEHTSTDGRRYYYNK 881
             +      S  +      +Q S + A VPA ++QP P+ + S+DW EHTS +GRRYYYNK
Sbjct: 181  GIHVSQSSSSVIPVHQIVEQPSVSTATVPAPSIQPKPTEEASTDWIEHTSANGRRYYYNK 240

Query: 882  KTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKXXXXX 1061
            KT+QSSWEKP+ELMTPIERADAST+WKEF + DGRKYY+NKVT  S W+IPEELK     
Sbjct: 241  KTRQSSWEKPLELMTPIERADASTNWKEFMSPDGRKYYHNKVTNQSTWSIPEELKLAREQ 300

Query: 1062 XXXXXXXXXXXXXXXXXXPQESLTIPLPEAXXXXXXXXXXXXXXXXXXXXXXXXNQPTI- 1238
                              P      P P A                          PTI 
Sbjct: 301  VEMASAKGTQSEVSSHIPP------PAPPAVKASSGAD----------------TPPTII 338

Query: 1239 ---AASGSPSLPVLSTN------AAGVQSPVAAVTTLSN-----------------STSR 1340
               A+S  P  PVL+T+       +    PV A +T++N                 S S 
Sbjct: 339  QGAASSPVPVAPVLATSDVKPVVVSASALPVGASSTVTNVDVVRTAADTITLSAAISESP 398

Query: 1341 DGGVPVATTPAASTSDIA--NSLD-----GGASVQDLEEARKGMAVAGKINVTPSEEKAV 1499
            +  + V     A  ++I+  +S+D      G S Q+ +E  K + V+ KIN    EEKA+
Sbjct: 399  EASIAVVNAVTAPMNNISKVSSMDMLSTAEGFSAQNADETVKDVVVSEKIN-NALEEKAI 457

Query: 1500 EEETLVYANKQEAKIAFKALLESANVESDWNWEQAMRVIINDKRYGALKTLGERKQAFNE 1679
            +++ L YA+KQEAK AFK LLE ANV SDW+W+QAMRVIINDKRYGAL+TLGERKQAFNE
Sbjct: 458  DQDPLTYASKQEAKNAFKVLLECANVGSDWSWDQAMRVIINDKRYGALRTLGERKQAFNE 517

Query: 1680 YLGQRKKQEAEERRVRQKKAREEFAKMLEESKELTSSTRWPKAMIMFENDERYKAVDRAR 1859
            +LGQ+KKQEAE+RR++QKKAREE+  MLEE  ELTSSTRW KA+ MFE+DERYKAV+R +
Sbjct: 518  FLGQKKKQEAEDRRIKQKKAREEYKTMLEECSELTSSTRWSKAVAMFEDDERYKAVEREK 577

Query: 1860 DREDIFENFTLDLXXXXXXXXXXXXXXNIMEYKQFLESCDFIKPSSQWRKVQDRLEDDER 2039
            DR+DIFEN+  +L              NI+EY+QFLESCDFIK +SQWRK+QDRLE DER
Sbjct: 578  DRKDIFENYIDELRQKERVKAQEQRKRNIVEYRQFLESCDFIKANSQWRKLQDRLETDER 637

Query: 2040 CSRLEKIDRLDIFXXXXXXXXXXXXXXXXXXXXXXXXAERKNRDEFRKLMEEHVA 2204
            CSRLEKIDRL+IF                        AERKNRDEFRKLME HVA
Sbjct: 638  CSRLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERKNRDEFRKLMEGHVA 692


>ref|XP_004292768.1| PREDICTED: pre-mRNA-processing protein 40A-like [Fragaria vesca
            subsp. vesca]
          Length = 990

 Score =  553 bits (1424), Expect = e-154
 Identities = 329/671 (49%), Positives = 395/671 (58%), Gaps = 31/671 (4%)
 Frame = +3

Query: 285  QFRPVGSQQQGQPFIPPGSEQFRPVGQGMPVPNVGPSPQNQQLPFPPSMXXXXXXXXXXX 464
            Q+RP+   QQGQ FI PGS+QF+PVGQG P+     S Q Q  P  P+            
Sbjct: 11   QYRPMVPAQQGQHFISPGSQQFQPVGQGQPLQY---SQQMQPYPLRPNQPGHAQPS---- 63

Query: 465  XXXXXSQAIQMPFVQQNRPITSESPQPHQNNQHXXXXXXXXXXXXXYTFAPSPYGQSQNN 644
                 SQA+ MP+ Q  RP+TS  P   Q                 Y +A   Y Q QNN
Sbjct: 64   -----SQALPMPYYQP-RPVTSVPPHSQQPAPPFNNQMPGMPYPSSYMYAQPSYAQPQNN 117

Query: 645  INASSHYQPISQMHTGVAPASGQTWLPS----GPVATAMQ--GQQSSATPAAVPATNLQP 806
             N+SS +QP+SQ      P +GQ W+ S    G   T  Q   QQ ++TP   PA N  P
Sbjct: 118  ANSSSQFQPMSQDQAHGVPTAGQPWMSSSSHQGAAVTPQQQPSQQPTSTPFPDPAVNA-P 176

Query: 807  NPSIQLSSDWQEHTSTDGRRYYYNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGR 986
            N +   SSDWQEH ++DGRRYY+N+ T+QSSWEKP+ELMTP+ERADAST WKE+T++DG+
Sbjct: 177  NLAQPSSSDWQEHMASDGRRYYFNRSTRQSSWEKPLELMTPLERADASTVWKEYTSADGK 236

Query: 987  KYYYNKVTKLSKWTIPEELKXXXXXXXXXXXXXXXXXXXXXXXPQESLTIPLPEAXXXXX 1166
            KYYYNKVT+ SKWTIPEELK                          S +   P       
Sbjct: 237  KYYYNKVTRESKWTIPEELK-------LAREQAQREHTQGTQSEMTSTSHAPPATASAEI 289

Query: 1167 XXXXXXXXXXXXXXXXXXXNQPT----IAASGSPS--LPVLSTNAAGVQSPVAA------ 1310
                               + P     I+A  +PS   P   + A GVQS +A       
Sbjct: 290  HAGASSVGPSTSSAQPGTVSSPVAVTPISAFSNPSPTTPSGLSVAPGVQSSMATGSVGVQ 349

Query: 1311 -----VTTLSNSTSRDGGVPVATTPAASTS--------DIANSLDGGASVQDLEEARKGM 1451
                 V+ L  S     G+P       + S        D A+S+D GAS QD+EEA+KGM
Sbjct: 350  PAVVNVSPLPASNVGSTGLPSTLVNTITKSVNENQAPQDSASSID-GASSQDIEEAKKGM 408

Query: 1452 AVAGKINVTPSEEKAVEEETLVYANKQEAKIAFKALLESANVESDWNWEQAMRVIINDKR 1631
            AVAGK+NVTPSEEKA+++E LVYA+KQEAK AFK+LLESANV SDW WEQAMR IINDKR
Sbjct: 409  AVAGKVNVTPSEEKAIDDEPLVYASKQEAKNAFKSLLESANVHSDWTWEQAMREIINDKR 468

Query: 1632 YGALKTLGERKQAFNEYLGQRKKQEAEERRVRQKKAREEFAKMLEESKELTSSTRWPKAM 1811
            YGAL+TLGERKQAFNEYLGQRKK E EERR+RQK+AREEF KMLEESKELTS+ RW KA+
Sbjct: 469  YGALRTLGERKQAFNEYLGQRKKLENEERRIRQKRAREEFTKMLEESKELTSTIRWSKAV 528

Query: 1812 IMFENDERYKAVDRARDREDIFENFTLDLXXXXXXXXXXXXXXNIMEYKQFLESCDFIKP 1991
             MFENDER+KAV+RARDRED++E++ ++L              NI EYK+FLESCDFIK 
Sbjct: 529  TMFENDERFKAVERARDREDLYESYIVELERKEKEIAAEEHRRNISEYKEFLESCDFIK- 587

Query: 1992 SSQWRKVQDRLEDDERCSRLEKIDRLDIFXXXXXXXXXXXXXXXXXXXXXXXXAERKNRD 2171
               WRKVQDRLEDDERC RL+K DRL IF                         ERKNRD
Sbjct: 588  ---WRKVQDRLEDDERCLRLDKFDRLLIFQDHIRDLEKEEEEQKKIQKEQLRRIERKNRD 644

Query: 2172 EFRKLMEEHVA 2204
            EFRK++EEH A
Sbjct: 645  EFRKILEEHAA 655