BLASTX nr result
ID: Papaver27_contig00006901
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00006901
(3602 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera] 120 8e-59
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3... 120 9e-59
ref|XP_007213829.1| hypothetical protein PRUPE_ppa004506mg [Prun... 112 6e-56
ref|XP_006350665.1| PREDICTED: 60S ribosomal export protein NMD3... 111 3e-55
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3... 115 4e-55
ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citr... 111 7e-55
ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3... 115 3e-54
ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3... 109 1e-53
gb|EXB53574.1| hypothetical protein L484_009314 [Morus notabilis] 114 1e-52
ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3... 102 3e-52
gb|EYU19701.1| hypothetical protein MIMGU_mgv1a003785mg [Mimulus... 111 4e-52
gb|EYU19702.1| hypothetical protein MIMGU_mgv1a003785mg [Mimulus... 111 4e-52
ref|XP_003553064.1| PREDICTED: 60S ribosomal export protein NMD3... 101 2e-51
ref|XP_007032442.1| Nonsense-mediated mRNA decay NMD3 family pro... 103 1e-50
ref|XP_007032443.1| Nonsense-mediated mRNA decay NMD3 family pro... 103 1e-50
ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putati... 94 3e-50
ref|XP_006352400.1| PREDICTED: 60S ribosomal export protein NMD3... 103 3e-50
ref|XP_004250232.1| PREDICTED: 60S ribosomal export protein NMD3... 100 2e-49
ref|XP_004503106.1| PREDICTED: 60S ribosomal export protein NMD3... 101 3e-47
ref|XP_003600668.1| 60S ribosomal export protein NMD3 [Medicago ... 102 1e-43
>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
Length = 594
Score = 120 bits (301), Expect(3) = 8e-59
Identities = 70/116 (60%), Positives = 78/116 (67%), Gaps = 10/116 (8%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LSTFNRA-------- 2881
CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVK+RV Q +++ + +A
Sbjct: 84 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRV-----QKEVLNGAILEQAYIVEFVQQ 138
Query: 2882 --TCEFCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CE CSR AN DQ +A VQL QH P RRTF L QLIL+HD A AIK KQMD
Sbjct: 139 EHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHDAAGRAIKIKQMD 194
Score = 96.3 bits (238), Expect(3) = 8e-59
Identities = 66/158 (41%), Positives = 82/158 (51%), Gaps = 45/158 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNLRNI-----YFWMWNSFIS-EVNDGGTTYAPADFQVAH 3402
DP TLR ++ ADQYWR L + Y + +S EVN GG+ YA AD QVA
Sbjct: 287 DPFTLRHCFLDADQYWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVAR 346
Query: 3403 VSNFGKKDL---------ELLN------------------------------AVLIKKSY 3465
VS+FGK D LLN A+LIKKSY
Sbjct: 347 VSDFGKNDTIFNIRTHLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSY 406
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EEK Q+K KPR+WKL+S+NM+VD+S + D+EKMNTE
Sbjct: 407 EEKRQRKRGKPRSWKLKSLNMEVDDSKGRADQEKMNTE 444
Score = 62.0 bits (149), Expect(3) = 8e-59
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ F+GKV+ +SR+ +Q VSHD K YN+K+T SVEI ICREDLIC
Sbjct: 211 VEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKYTFSVEICPICREDLIC 258
>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
Length = 510
Score = 120 bits (301), Expect(3) = 9e-59
Identities = 70/116 (60%), Positives = 78/116 (67%), Gaps = 10/116 (8%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LSTFNRA-------- 2881
CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVK+RV Q +++ + +A
Sbjct: 84 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRV-----QKEVLNGAILEQAYIVEFVQQ 138
Query: 2882 --TCEFCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CE CSR AN DQ +A VQL QH P RRTF L QLIL+HD A AIK KQMD
Sbjct: 139 EHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHDAAGRAIKIKQMD 194
Score = 96.3 bits (238), Expect(3) = 9e-59
Identities = 66/158 (41%), Positives = 82/158 (51%), Gaps = 45/158 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNLRNI-----YFWMWNSFIS-EVNDGGTTYAPADFQVAH 3402
DP TLR ++ ADQYWR L + Y + +S EVN GG+ YA AD QVA
Sbjct: 287 DPFTLRHCFLDADQYWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVAR 346
Query: 3403 VSNFGKKDL---------ELLN------------------------------AVLIKKSY 3465
VS+FGK D LLN A+LIKKSY
Sbjct: 347 VSDFGKNDTIFNIRTHLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSY 406
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EEK Q+K KPR+WKL+S+NM+VD+S + D+EKMNTE
Sbjct: 407 EEKRQRKRGKPRSWKLKSLNMEVDDSKGRADQEKMNTE 444
Score = 62.0 bits (149), Expect(3) = 9e-59
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ F+GKV+ +SR+ +Q VSHD K YN+K+T SVEI ICREDLIC
Sbjct: 211 VEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKYTFSVEICPICREDLIC 258
>ref|XP_007213829.1| hypothetical protein PRUPE_ppa004506mg [Prunus persica]
gi|462409694|gb|EMJ15028.1| hypothetical protein
PRUPE_ppa004506mg [Prunus persica]
Length = 506
Score = 112 bits (280), Expect(3) = 6e-56
Identities = 64/111 (57%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LS-----TFNRATCE 2890
CVKRLKNLNKVRL+HAEFIWTEPHSKRIKVK++V ++ S CE
Sbjct: 78 CVKRLKNLNKVRLVHAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQEHMCE 137
Query: 2891 FCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CSR AN DQ +A VQL QH RRTF L QLIL+H A AIK KQM+
Sbjct: 138 SCSRVQANPDQWVASVQLRQHVSHRRTFFYLEQLILRHAAAASAIKIKQME 188
Score = 87.8 bits (216), Expect(3) = 6e-56
Identities = 64/159 (40%), Positives = 79/159 (49%), Gaps = 45/159 (28%)
Frame = +1
Query: 3238 FDPLTLRM*YVIADQYWRIQVDNLRNI-----YFWMWNSFIS-EVNDGGTTYAPADFQVA 3399
FDP TLR ++ DQYWR +L Y + IS EVN GG+ A AD QVA
Sbjct: 280 FDPFTLRHCFLDTDQYWRYSFKSLHTSRELVEYIVLDLEIISPEVNVGGSRLALADAQVA 339
Query: 3400 HVSNFGKKDL---------ELLN------------------------------AVLIKKS 3462
VS+FGK D LLN A+LIKKS
Sbjct: 340 RVSDFGKNDTIFNIKTHLGHLLNPGDYALGYDLYGANSNDDELEKYKGLVIPDAILIKKS 399
Query: 3463 YEEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
YEEK QKKH K R WKL+S+ M+VD+ KLD+EK+++E
Sbjct: 400 YEEKRQKKHAKARPWKLKSLGMEVDD-KAKLDQEKVDSE 437
Score = 68.9 bits (167), Expect(3) = 6e-56
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ FVGKV+ ++SR+ +Q VSHD K YN+KHT SVEIS ICREDLIC
Sbjct: 205 VEFVGKVAPVRSRSDKQLVSHDSKSNNYNYKHTFSVEISPICREDLIC 252
>ref|XP_006350665.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum tuberosum]
Length = 511
Score = 111 bits (278), Expect(4) = 3e-55
Identities = 65/116 (56%), Positives = 75/116 (64%), Gaps = 10/116 (8%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LSTFNRA-------- 2881
CVKRLKNLNKVRL+ AEFIWTEPHSKRIKVK++V Q +++ + +A
Sbjct: 84 CVKRLKNLNKVRLVQAEFIWTEPHSKRIKVKLKV-----QKEVLHGAILEQAYTVEFVIQ 138
Query: 2882 --TCEFCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CE C+R AN DQ +A VQL QH RRTF L QLILKHD A AI KQMD
Sbjct: 139 DQMCEACTRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAASRAIMIKQMD 194
Score = 86.3 bits (212), Expect(4) = 3e-55
Identities = 59/159 (37%), Positives = 81/159 (50%), Gaps = 46/159 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNLRNIYFWMW------NSFISEVNDGGTTYAPADFQVAH 3402
DP TLR ++ A+QYWR +L + + + +EVN GG+ YA AD QVA
Sbjct: 287 DPFTLRNCFLDAEQYWRASFKSLLSSRLLVEYIVLDVEAVSTEVNIGGSKYALADAQVAR 346
Query: 3403 VSNFGKKDL---------ELLN------------------------------AVLIKKSY 3465
+S+FGK D LLN +L+KKSY
Sbjct: 347 ISDFGKNDTIFNVRTHLGHLLNPGDYALGYDLYATNSNDSELDKYKGFVLPDVILVKKSY 406
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLD-EEKMNTE 3579
EEK QKK KPR+WKL+S+NM++D++ + D EEKMN+E
Sbjct: 407 EEKWQKKRGKPRSWKLKSLNMEIDDNVKGRDHEEKMNSE 445
Score = 64.7 bits (156), Expect(4) = 3e-55
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ F+GKV +SRN +Q VSHD K YN+K+T SVEIS +CREDLIC
Sbjct: 211 VEFIGKVVPSRSRNDKQLVSHDSKNNNYNYKYTFSVEISPVCREDLIC 258
Score = 24.6 bits (52), Expect(4) = 3e-55
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 2/24 (8%)
Frame = +1
Query: 2629 QKNVSIMYL--CNSCLQLPGTWIK 2694
QK+V I + C+S LQ P TWIK
Sbjct: 49 QKHVIICHCPECDSYLQPPRTWIK 72
>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
Length = 505
Score = 115 bits (288), Expect(3) = 4e-55
Identities = 63/111 (56%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LS-----TFNRATCE 2890
C+KRL+NLNKV+L+HAEF+WTEPHSKRIKVK++V Q ++ S CE
Sbjct: 84 CIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLQGAILEQSYVAEYVVQDHLCE 143
Query: 2891 FCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CSR AN DQ +A VQL QH P RRTF L QLILKH A AI+ KQMD
Sbjct: 144 SCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQMD 194
Score = 85.9 bits (211), Expect(3) = 4e-55
Identities = 60/158 (37%), Positives = 80/158 (50%), Gaps = 45/158 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNL---RNIYFWMW---NSFISEVNDGGTTYAPADFQVAH 3402
DP TLR ++ ADQYWR +L R + ++ + +EVN G+ Y A QVA
Sbjct: 287 DPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVAR 346
Query: 3403 VSNFGKKD---------------------------------------LELLNAVLIKKSY 3465
VS+FG+ D LEL A+LIKKSY
Sbjct: 347 VSDFGRNDTMFSIKTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSY 406
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EEK Q+KH KPR+WKL+S++M VD+ K+DE KMN+E
Sbjct: 407 EEKRQRKHGKPRSWKLKSLSMDVDDKT-KVDENKMNSE 443
Score = 65.1 bits (157), Expect(3) = 4e-55
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ FVGKV+ I+SR+ +Q VSHD K +N KHT SVEIS ICREDLIC
Sbjct: 211 VEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLIC 258
>ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citrus clementina]
gi|557532730|gb|ESR43913.1| hypothetical protein
CICLE_v10011515mg [Citrus clementina]
Length = 511
Score = 111 bits (278), Expect(3) = 7e-55
Identities = 63/111 (56%), Positives = 73/111 (65%), Gaps = 5/111 (4%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LS-----TFNRATCE 2890
CVKRLKNLN+VRL++AEFIWTEPHSKRIKVK++V ++ S C+
Sbjct: 84 CVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCD 143
Query: 2891 FCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CSR AN DQ +A VQL QH RRTF L QLILKHD A AI+ KQMD
Sbjct: 144 SCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRIKQMD 194
Score = 89.4 bits (220), Expect(3) = 7e-55
Identities = 61/158 (38%), Positives = 79/158 (50%), Gaps = 45/158 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNL---RNIYFWMW---NSFISEVNDGGTTYAPADFQVAH 3402
DPLTLR ++ ADQYWR +L R + ++ SEVN GG+ Y AD QVA
Sbjct: 287 DPLTLRHCFLDADQYWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVAR 346
Query: 3403 VSNFGKKD---------------------------------------LELLNAVLIKKSY 3465
VS+FGK D L L +LIKKSY
Sbjct: 347 VSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKKSY 406
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EEK +K KPR+WKL+S++M+VD+S + D+EKMN E
Sbjct: 407 EEKRLRKRSKPRSWKLKSLDMEVDDSKGRTDQEKMNKE 444
Score = 64.7 bits (156), Expect(3) = 7e-55
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ FVGKV+ ++SR+ +Q VSHD K +N+K+T SVEIS ICREDLIC
Sbjct: 211 VEFVGKVAPVRSRHDKQLVSHDPKSNNFNYKYTFSVEISPICREDLIC 258
>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
Length = 505
Score = 115 bits (288), Expect(3) = 3e-54
Identities = 63/111 (56%), Positives = 74/111 (66%), Gaps = 5/111 (4%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LS-----TFNRATCE 2890
C+KRL+NLNKV+L+HAEF+WTEPHSKRIKVK++V Q ++ S CE
Sbjct: 84 CIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLQGAILEQSYVAEYVVQDHLCE 143
Query: 2891 FCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CSR AN DQ +A VQL QH P RRTF L QLILKH A AI+ KQMD
Sbjct: 144 SCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRIKQMD 194
Score = 82.8 bits (203), Expect(3) = 3e-54
Identities = 59/158 (37%), Positives = 79/158 (50%), Gaps = 45/158 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNL---RNIYFWMW---NSFISEVNDGGTTYAPADFQVAH 3402
DP TLR ++ ADQYWR +L R + ++ + +EVN G+ Y A QVA
Sbjct: 287 DPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVAR 346
Query: 3403 VSNFGKKD---------------------------------------LELLNAVLIKKSY 3465
VS+FG+ D LEL A+LIKKSY
Sbjct: 347 VSDFGRNDTMFSIKTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSY 406
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EEK Q+K KPR+WKL+S++M VD+ K+DE KMN+E
Sbjct: 407 EEKRQRKRGKPRSWKLKSLSMDVDDKT-KVDENKMNSE 443
Score = 65.1 bits (157), Expect(3) = 3e-54
Identities = 31/48 (64%), Positives = 37/48 (77%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ FVGKV+ I+SR+ +Q VSHD K +N KHT SVEIS ICREDLIC
Sbjct: 211 VEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLIC 258
>ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3-like, partial [Citrus
sinensis]
Length = 523
Score = 109 bits (272), Expect(3) = 1e-53
Identities = 62/111 (55%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LS-----TFNRATCE 2890
CVKRLKNLN+VRL++AEFIWTEPHSKRIKVK++V ++ S C+
Sbjct: 97 CVKRLKNLNRVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMCD 156
Query: 2891 FCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CSR AN DQ +A VQL QH RRTF L QLILKHD A AI+ QMD
Sbjct: 157 SCSRVQANPDQWVAAVQLRQHVTHRRTFFYLEQLILKHDAAARAIRITQMD 207
Score = 87.4 bits (215), Expect(3) = 1e-53
Identities = 60/158 (37%), Positives = 78/158 (49%), Gaps = 45/158 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNL---RNIYFWMW---NSFISEVNDGGTTYAPADFQVAH 3402
DP TLR ++ ADQYWR +L R + ++ SEVN GG+ Y AD QVA
Sbjct: 300 DPFTLRHCFLDADQYWRSSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGSKYVLADAQVAR 359
Query: 3403 VSNFGKKD---------------------------------------LELLNAVLIKKSY 3465
VS+FGK D L L +LIKKSY
Sbjct: 360 VSDFGKNDTIFSIRTHLGHLLNPGDYALGYDLYSANNNDMELDKYKGLVLPETILIKKSY 419
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EEK +K KPR+WKL+S++M+VD+S + D+EKMN E
Sbjct: 420 EEKRLRKRGKPRSWKLKSLDMEVDDSKGRTDQEKMNKE 457
Score = 64.7 bits (156), Expect(3) = 1e-53
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ FVGKV+ ++SR+ +Q VSHD K +N+K+T SVEIS ICREDLIC
Sbjct: 224 VEFVGKVAPVRSRHDKQLVSHDPKSNNFNYKYTFSVEISPICREDLIC 271
>gb|EXB53574.1| hypothetical protein L484_009314 [Morus notabilis]
Length = 508
Score = 114 bits (284), Expect(3) = 1e-52
Identities = 64/111 (57%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LS-----TFNRATCE 2890
CVKRLKNLNK+RL+HAEFIWTEPHSKRIKVK++V ++ S CE
Sbjct: 83 CVKRLKNLNKLRLVHAEFIWTEPHSKRIKVKLKVQKEVLNGAVLEQSYVVEFVQQEHMCE 142
Query: 2891 FCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CSR AN DQ +A VQL QH RRTF L Q+ILKH A AIK KQMD
Sbjct: 143 SCSRVQANPDQWVASVQLRQHVSHRRTFFYLEQMILKHGAAATAIKIKQMD 193
Score = 80.5 bits (197), Expect(3) = 1e-52
Identities = 56/158 (35%), Positives = 79/158 (50%), Gaps = 45/158 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNLRNI-----YFWMWNSFIS-EVNDGGTTYAPADFQVAH 3402
DP TLR ++ +DQYWR +L Y + +S +VN GG+ YA AD QVA
Sbjct: 286 DPFTLRHCFLDSDQYWRSSFKSLLTSRQLVEYIVLDVEIVSPDVNVGGSRYALADAQVAR 345
Query: 3403 VSNFGKKD---------------------------------------LELLNAVLIKKSY 3465
+S+FGK D L L +A+LIKK+Y
Sbjct: 346 LSDFGKNDTIFNIRTHLGHILNPGDYALGYDLYAANNNDIELEKYKGLVLPDAILIKKNY 405
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EEK Q+K K R+WKL+S+NM++D K ++EK+N+E
Sbjct: 406 EEKRQRKRGKARSWKLKSLNMEIDEKG-KAEQEKVNSE 442
Score = 63.5 bits (153), Expect(3) = 1e-52
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ F+GKV I+SR+ +Q VSHD K YN+K+T SVEIS ICREDLIC
Sbjct: 210 VEFLGKVVLIRSRHDKQLVSHDLKSNNYNYKYTFSVEISPICREDLIC 257
>ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3-like [Glycine max]
Length = 510
Score = 102 bits (254), Expect(3) = 3e-52
Identities = 59/114 (51%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Frame = +2
Query: 2726 CVKRLK---NLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LS-----TFNRA 2881
C+K+L+ N NKVRL+HAEFIWTEPHS+R+KVKV+V ++ S
Sbjct: 90 CLKKLQKNLNSNKVRLVHAEFIWTEPHSRRVKVKVKVQKEVLNGAILEQSYPVEYVQQEH 149
Query: 2882 TCEFCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CE CSR AN DQ +A VQL QH RRTF L QLILKH A AI+ KQM+
Sbjct: 150 MCESCSRVQANPDQWVAAVQLRQHVSHRRTFFYLEQLILKHGAAATAIRIKQME 203
Score = 87.4 bits (215), Expect(3) = 3e-52
Identities = 63/157 (40%), Positives = 80/157 (50%), Gaps = 44/157 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNL---RNIYFWMW---NSFISEVNDGGTTYAPADFQVAH 3402
DP TLR ++ ADQYWR +L R + ++ + SEV GGT Y AD QVA
Sbjct: 296 DPFTLRHCFIDADQYWRTSFKSLLTSRQLVEYIVLDVETVSSEVTIGGTKYRLADAQVAR 355
Query: 3403 VSNFGKKDL---------ELLN-----------------------------AVLIKKSYE 3468
VS+FGK D LLN A+LIKKSYE
Sbjct: 356 VSDFGKNDTIFNIKTHLGHLLNPGDYALGYDLYGANSNDMELDKYKGHIPEAILIKKSYE 415
Query: 3469 EKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EK QKK KPR+WKL+S+ M+VD+ R +DE+KM +E
Sbjct: 416 EKHQKKRGKPRSWKLKSLEMEVDDKGR-VDEDKMVSE 451
Score = 67.0 bits (162), Expect(3) = 3e-52
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ F+GKVS ++SR+ +Q VSHD K YN+K+T SVEIS ICREDLIC
Sbjct: 220 VEFIGKVSPVRSRHDKQLVSHDPKSNNYNYKYTFSVEISPICREDLIC 267
>gb|EYU19701.1| hypothetical protein MIMGU_mgv1a003785mg [Mimulus guttatus]
Length = 564
Score = 111 bits (277), Expect(3) = 4e-52
Identities = 63/116 (54%), Positives = 76/116 (65%), Gaps = 10/116 (8%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LSTFNRA-------- 2881
CVK+LKNLN VRL+HAEFIWTEPHSKRIKVK++V Q +++ + +A
Sbjct: 136 CVKKLKNLNTVRLVHAEFIWTEPHSKRIKVKLKV-----QKEVLNGAVLEQAFTVEYTVL 190
Query: 2882 --TCEFCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
C+ CSR AN DQ +A VQL QH RRTF L QLILKHD A AI+ +QMD
Sbjct: 191 DQMCDSCSRVQANPDQWVAAVQLRQHVSHRRTFFYLEQLILKHDAAKHAIRIQQMD 246
Score = 79.7 bits (195), Expect(3) = 4e-52
Identities = 57/158 (36%), Positives = 77/158 (48%), Gaps = 45/158 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNL---RNIYFWMW---NSFISEVNDGGTTYAPADFQVAH 3402
DP TLR ++ ADQYWR L R + ++ SEV GG+ Y AD QVA
Sbjct: 339 DPFTLRHCFLDADQYWRTSFKALLSSRQLVEYVVLDVEPVSSEVTVGGSRYILADAQVAR 398
Query: 3403 VSNFGKKDL---------ELLN------------------------------AVLIKKSY 3465
VS+FGK D +LN +L+KKSY
Sbjct: 399 VSDFGKNDTIFNVRTHLGHILNPGDNALGYDLYSANSNDIELDKYKGFSIPDVILVKKSY 458
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EE+ QKK K R WKL+S+NM+VD++ R +EEK+++E
Sbjct: 459 EERRQKKRGKARTWKLKSLNMEVDSTARGYNEEKISSE 496
Score = 65.5 bits (158), Expect(3) = 4e-52
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ FVGKVS ++SRN +Q VS D K YN+K+T SVEIS +CREDLIC
Sbjct: 263 VDFVGKVSPVRSRNDKQLVSFDSKSNDYNYKYTFSVEISPVCREDLIC 310
>gb|EYU19702.1| hypothetical protein MIMGU_mgv1a003785mg [Mimulus guttatus]
Length = 516
Score = 111 bits (277), Expect(3) = 4e-52
Identities = 63/116 (54%), Positives = 76/116 (65%), Gaps = 10/116 (8%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LSTFNRA-------- 2881
CVK+LKNLN VRL+HAEFIWTEPHSKRIKVK++V Q +++ + +A
Sbjct: 88 CVKKLKNLNTVRLVHAEFIWTEPHSKRIKVKLKV-----QKEVLNGAVLEQAFTVEYTVL 142
Query: 2882 --TCEFCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
C+ CSR AN DQ +A VQL QH RRTF L QLILKHD A AI+ +QMD
Sbjct: 143 DQMCDSCSRVQANPDQWVAAVQLRQHVSHRRTFFYLEQLILKHDAAKHAIRIQQMD 198
Score = 79.7 bits (195), Expect(3) = 4e-52
Identities = 57/158 (36%), Positives = 77/158 (48%), Gaps = 45/158 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNL---RNIYFWMW---NSFISEVNDGGTTYAPADFQVAH 3402
DP TLR ++ ADQYWR L R + ++ SEV GG+ Y AD QVA
Sbjct: 291 DPFTLRHCFLDADQYWRTSFKALLSSRQLVEYVVLDVEPVSSEVTVGGSRYILADAQVAR 350
Query: 3403 VSNFGKKDL---------ELLN------------------------------AVLIKKSY 3465
VS+FGK D +LN +L+KKSY
Sbjct: 351 VSDFGKNDTIFNVRTHLGHILNPGDNALGYDLYSANSNDIELDKYKGFSIPDVILVKKSY 410
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EE+ QKK K R WKL+S+NM+VD++ R +EEK+++E
Sbjct: 411 EERRQKKRGKARTWKLKSLNMEVDSTARGYNEEKISSE 448
Score = 65.5 bits (158), Expect(3) = 4e-52
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ FVGKVS ++SRN +Q VS D K YN+K+T SVEIS +CREDLIC
Sbjct: 215 VDFVGKVSPVRSRNDKQLVSFDSKSNDYNYKYTFSVEISPVCREDLIC 262
>ref|XP_003553064.1| PREDICTED: 60S ribosomal export protein NMD3-like isoform X1 [Glycine
max] gi|571543022|ref|XP_006602021.1| PREDICTED: 60S
ribosomal export protein NMD3-like isoform X2 [Glycine
max]
Length = 510
Score = 101 bits (252), Expect(3) = 2e-51
Identities = 59/114 (51%), Positives = 71/114 (62%), Gaps = 8/114 (7%)
Frame = +2
Query: 2726 CVKRLK---NLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LS-----TFNRA 2881
C+K+L+ N NKVRL+HAEFIWTEPHS+R+KVKV+V ++ S
Sbjct: 90 CLKKLQKNLNSNKVRLVHAEFIWTEPHSRRVKVKVKVQKEVLNGAILEQSYPVEYVQQEH 149
Query: 2882 TCEFCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CE CSR AN DQ +A VQL QH RRTF L QLILKH A AI+ KQM+
Sbjct: 150 MCESCSRVQANPDQWVASVQLRQHVSHRRTFFYLEQLILKHGAAATAIRIKQME 203
Score = 86.3 bits (212), Expect(3) = 2e-51
Identities = 62/157 (39%), Positives = 80/157 (50%), Gaps = 44/157 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNL---RNIYFWMW---NSFISEVNDGGTTYAPADFQVAH 3402
DP TLR ++ ADQYWR +L R + ++ + SEV GGT Y AD QVA
Sbjct: 296 DPFTLRHCFIDADQYWRASFKSLLTSRQLVEYIVLDVETVSSEVTIGGTKYRLADAQVAR 355
Query: 3403 VSNFGKKDL---------ELLN-----------------------------AVLIKKSYE 3468
VS+FGK D LLN A+LIKKSYE
Sbjct: 356 VSDFGKNDTIFNIKTHLGHLLNPGDYALGYDLYGANSNDMEFDKYKGHIPEAILIKKSYE 415
Query: 3469 EKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EK QKK KPR+WKL+S+ M+VD+ R +D++KM +E
Sbjct: 416 EKHQKKRGKPRSWKLKSLEMEVDDKGR-VDQDKMVSE 451
Score = 65.9 bits (159), Expect(3) = 2e-51
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ F+GKV+ ++SR+ +Q VSHD K YN+K+T SVEIS ICREDLIC
Sbjct: 220 VEFIGKVAPVRSRHDKQLVSHDPKSNNYNYKYTFSVEISPICREDLIC 267
>ref|XP_007032442.1| Nonsense-mediated mRNA decay NMD3 family protein isoform 1 [Theobroma
cacao] gi|508711471|gb|EOY03368.1| Nonsense-mediated mRNA
decay NMD3 family protein isoform 1 [Theobroma cacao]
Length = 520
Score = 103 bits (258), Expect(3) = 1e-50
Identities = 63/112 (56%), Positives = 72/112 (64%), Gaps = 6/112 (5%)
Frame = +2
Query: 2726 CVKRLKN-LNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LSTFNRAT-----C 2887
CVKRL+N L KVRL++AEFIWTEPHSKRIKVK++V ++ S C
Sbjct: 96 CVKRLENDLKKVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMC 155
Query: 2888 EFCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
E C+R AN DQ +A VQL Q RRTF L QLILKHD AV AIK KQMD
Sbjct: 156 ESCTRFQANPDQWVAAVQLRQRVAHRRTFFYLEQLILKHDAAVHAIKIKQMD 207
Score = 82.8 bits (203), Expect(3) = 1e-50
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 42/155 (27%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNLRN----IYFWMWNSFI--SEVNDGGTTYAPADFQVAH 3402
DP TLR ++ DQYWR +L + + +++ + E N GG+ Y AD +VA
Sbjct: 300 DPFTLRQCFLDTDQYWRHSFKSLLGSRQLVEYDVFDVEVVSPEYNVGGSKYVLADIEVAR 359
Query: 3403 VSNFGK------------------------------------KDLELLNAVLIKKSYEEK 3474
++++GK K L L A+LIKKSYEEK
Sbjct: 360 ITDYGKLFYIRTHLGHILKPGDRALGYDLYGANSNDMELDKYKGLVLPEAILIKKSYEEK 419
Query: 3475 GQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
QKK KPR+WKL+S++M+VD++ + EEKMN+E
Sbjct: 420 RQKKRGKPRSWKLKSLDMEVDDTKGRAYEEKMNSE 454
Score = 64.7 bits (156), Expect(3) = 1e-50
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ F+GKV+ KSR+ +Q VSHD K YN+K+T SVEIS ICREDLIC
Sbjct: 224 VEFLGKVAPTKSRHDKQLVSHDPKNNNYNYKYTFSVEISPICREDLIC 271
>ref|XP_007032443.1| Nonsense-mediated mRNA decay NMD3 family protein isoform 2 [Theobroma
cacao] gi|590649587|ref|XP_007032444.1| Nonsense-mediated
mRNA decay NMD3 family protein isoform 2 [Theobroma
cacao] gi|508711472|gb|EOY03369.1| Nonsense-mediated mRNA
decay NMD3 family protein isoform 2 [Theobroma cacao]
gi|508711473|gb|EOY03370.1| Nonsense-mediated mRNA decay
NMD3 family protein isoform 2 [Theobroma cacao]
Length = 506
Score = 103 bits (258), Expect(3) = 1e-50
Identities = 63/112 (56%), Positives = 72/112 (64%), Gaps = 6/112 (5%)
Frame = +2
Query: 2726 CVKRLKN-LNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LSTFNRAT-----C 2887
CVKRL+N L KVRL++AEFIWTEPHSKRIKVK++V ++ S C
Sbjct: 82 CVKRLENDLKKVRLVNAEFIWTEPHSKRIKVKLKVQKEVLNGAILEQSYVVEYVQQDHMC 141
Query: 2888 EFCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
E C+R AN DQ +A VQL Q RRTF L QLILKHD AV AIK KQMD
Sbjct: 142 ESCTRFQANPDQWVAAVQLRQRVAHRRTFFYLEQLILKHDAAVHAIKIKQMD 193
Score = 82.8 bits (203), Expect(3) = 1e-50
Identities = 54/155 (34%), Positives = 79/155 (50%), Gaps = 42/155 (27%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNLRN----IYFWMWNSFI--SEVNDGGTTYAPADFQVAH 3402
DP TLR ++ DQYWR +L + + +++ + E N GG+ Y AD +VA
Sbjct: 286 DPFTLRQCFLDTDQYWRHSFKSLLGSRQLVEYDVFDVEVVSPEYNVGGSKYVLADIEVAR 345
Query: 3403 VSNFGK------------------------------------KDLELLNAVLIKKSYEEK 3474
++++GK K L L A+LIKKSYEEK
Sbjct: 346 ITDYGKLFYIRTHLGHILKPGDRALGYDLYGANSNDMELDKYKGLVLPEAILIKKSYEEK 405
Query: 3475 GQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
QKK KPR+WKL+S++M+VD++ + EEKMN+E
Sbjct: 406 RQKKRGKPRSWKLKSLDMEVDDTKGRAYEEKMNSE 440
Score = 64.7 bits (156), Expect(3) = 1e-50
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ F+GKV+ KSR+ +Q VSHD K YN+K+T SVEIS ICREDLIC
Sbjct: 210 VEFLGKVAPTKSRHDKQLVSHDPKNNNYNYKYTFSVEISPICREDLIC 257
>ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223526598|gb|EEF28848.1| nonsense-mediated mRNA decay
protein, putative [Ricinus communis]
Length = 511
Score = 94.4 bits (233), Expect(3) = 3e-50
Identities = 55/101 (54%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Frame = +2
Query: 2756 VRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LSTF-----NRATCEFCSRGSANQD 2920
V L+HAEFIWTEPHSKRIK++ RV + ++ S + CE CSR AN D
Sbjct: 95 VTLVHAEFIWTEPHSKRIKLRCRVQKEVHRGAVLEQSYIVEFVQQESMCESCSRVQANPD 154
Query: 2921 QRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
Q +A VQL QH RRTF L QLILKHD A AIK KQMD
Sbjct: 155 QWVASVQLRQHVSHRRTFFYLEQLILKHDAAARAIKIKQMD 195
Score = 91.3 bits (225), Expect(3) = 3e-50
Identities = 63/158 (39%), Positives = 79/158 (50%), Gaps = 45/158 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNLRNI-----YFWMWNSFIS-EVNDGGTTYAPADFQVAH 3402
DPLTLR Y+ DQYWR +L Y + IS EVN G + YA A+ QVA
Sbjct: 288 DPLTLRHCYLDGDQYWRSSFKSLLTSRQLVEYIVLDVDIISPEVNIGSSKYAMAEVQVAR 347
Query: 3403 VSNFGKKD---------------------------------------LELLNAVLIKKSY 3465
+S+FGK D L L A+LIKKSY
Sbjct: 348 LSDFGKNDTIFFIKTHLGHILKPGDQALGYDLYGANSNDIELDKYKGLVLPEAILIKKSY 407
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EEK Q+K KPRAWKL+S+ M+VD+S + D+EKM+TE
Sbjct: 408 EEKRQRKRGKPRAWKLKSLEMEVDDSRGRNDQEKMDTE 445
Score = 64.7 bits (156), Expect(3) = 3e-50
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ F+GKV+ ++SR+ +Q VSHD K YN+K+T SVEIS ICREDL+C
Sbjct: 212 VEFLGKVAPVRSRHDKQLVSHDPKSNNYNYKYTFSVEISPICREDLVC 259
>ref|XP_006352400.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum tuberosum]
Length = 511
Score = 103 bits (256), Expect(3) = 3e-50
Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LS-----TFNRATCE 2890
C+K+LKNLNKV+L++AEFIWTEPHSKRIK++++V ++ S C+
Sbjct: 84 CIKKLKNLNKVKLVNAEFIWTEPHSKRIKIRLKVQKEVLNGAVLEQSYIVEYVVQDQMCD 143
Query: 2891 FCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CS+ N DQ +A VQL QH RRTF L QLI+KHD A AIK +Q+D
Sbjct: 144 SCSKVQVNPDQWVAAVQLRQHVSHRRTFFYLEQLIIKHDAANRAIKIQQLD 194
Score = 90.1 bits (222), Expect(3) = 3e-50
Identities = 63/159 (39%), Positives = 79/159 (49%), Gaps = 46/159 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNLRNI-----YFWMWNSFISE-VNDGGTTYAPADFQVAH 3402
DP TLR ++ ADQYWR L + Y + +SE VN GG+ Y AD QVA
Sbjct: 287 DPFTLRHCFLDADQYWRASFKPLLSSRQLVEYVVLDVDVVSEEVNIGGSKYVLADIQVAR 346
Query: 3403 VSNFGKKD---------------------------------------LELLNAVLIKKSY 3465
VS+FGK D L L +LIKKSY
Sbjct: 347 VSDFGKNDTIFSVRTHLGHLLDAGDYALGYDLYRANSNDFELEKYKGLVLPEVILIKKSY 406
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLD-EEKMNTE 3579
EEK QKK KPR+WKL+S+NM++DNS + D E+KMN+E
Sbjct: 407 EEKHQKKRGKPRSWKLKSLNMEIDNSGKGRDQEQKMNSE 445
Score = 56.6 bits (135), Expect(3) = 3e-50
Identities = 25/48 (52%), Positives = 34/48 (70%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ FV +V +++RN +Q SHD K N+K+T SVEIS +CREDLIC
Sbjct: 211 VDFVCRVVLVRTRNAKQLASHDHKSNIVNYKYTFSVEISPVCREDLIC 258
>ref|XP_004250232.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum
lycopersicum]
Length = 508
Score = 100 bits (250), Expect(3) = 2e-49
Identities = 54/111 (48%), Positives = 71/111 (63%), Gaps = 5/111 (4%)
Frame = +2
Query: 2726 CVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LS-----TFNRATCE 2890
C+K+LKNLNKV+L++ EFIWTEPHSKRIK++++V ++ S C+
Sbjct: 84 CIKKLKNLNKVKLVNTEFIWTEPHSKRIKIRLKVQKEVLNGAVLEQSYIVEYVVQDQMCD 143
Query: 2891 FCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMD 3043
CS+ N DQ +A VQL QH RRTF L QLI+KHD A AIK +Q+D
Sbjct: 144 PCSKVQVNPDQWVAAVQLRQHVSHRRTFFYLEQLIIKHDAANRAIKIQQLD 194
Score = 90.1 bits (222), Expect(3) = 2e-49
Identities = 63/159 (39%), Positives = 79/159 (49%), Gaps = 46/159 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNLRNI-----YFWMWNSFISE-VNDGGTTYAPADFQVAH 3402
DP TLR ++ ADQYWR L + Y + +SE VN GG+ Y AD QVA
Sbjct: 287 DPFTLRHCFLDADQYWRASFKPLLSSRQLVEYVVLDVDVVSEEVNIGGSKYVLADIQVAR 346
Query: 3403 VSNFGKKD---------------------------------------LELLNAVLIKKSY 3465
VS+FGK D L L +LIKKSY
Sbjct: 347 VSDFGKNDTIFSVRTHLGHLLDAGDYALGYDLYRANSNDFELEKYKGLVLPEVILIKKSY 406
Query: 3466 EEKGQKKHVKPRAWKLESMNMKVDNSNRKLD-EEKMNTE 3579
EEK QKK KPR+WKL+S+NM++DNS + D E+KMN+E
Sbjct: 407 EEKRQKKRGKPRSWKLKSLNMEIDNSGKGKDQEQKMNSE 445
Score = 56.6 bits (135), Expect(3) = 2e-49
Identities = 24/48 (50%), Positives = 34/48 (70%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ FV ++ +++RN +Q SHD K N+K+T SVEIS +CREDLIC
Sbjct: 211 VDFVSRMVLVRTRNAKQLASHDHKSNIVNYKYTFSVEISPVCREDLIC 258
>ref|XP_004503106.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cicer arietinum]
Length = 514
Score = 101 bits (251), Expect(3) = 3e-47
Identities = 57/115 (49%), Positives = 73/115 (63%), Gaps = 8/115 (6%)
Frame = +2
Query: 2726 CVKRLK---NLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LSTFNRAT---- 2884
C+K+L+ N+N+V+L++AEFIWTEPHSKR+KVKV V + ++ S
Sbjct: 84 CLKKLQKNMNVNRVKLVNAEFIWTEPHSKRVKVKVSVQKEVYNGAILEQSYLVEYVQQDH 143
Query: 2885 -CEFCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMDH 3046
CE CSR AN DQ +A VQL QH RRTF L QLILKH A +++ KQMDH
Sbjct: 144 MCESCSRVQANPDQWVAAVQLRQHVSHRRTFFYLEQLILKHGAAARSVRIKQMDH 198
Score = 71.6 bits (174), Expect(3) = 3e-47
Identities = 53/162 (32%), Positives = 74/162 (45%), Gaps = 49/162 (30%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNLRNI-----YFWMWNSFIS------EVNDGGTTYAPAD 3387
DPLTL+ ++ ADQYWR +L Y + +S EV GGT Y AD
Sbjct: 290 DPLTLKYGFLDADQYWRTSFKSLLTSRQLVEYIVLDIEVVSSRFGPSEVTMGGTKYVLAD 349
Query: 3388 FQVAHVSNFGKKDL--------------------------------------ELLNAVLI 3453
QVA VS+FG D + +LI
Sbjct: 350 AQVARVSDFGNNDTIFFVRTHLGHLLKPGDYALGYDLYGANSNDFELDKYKGHIPEVILI 409
Query: 3454 KKSYEEKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
KKSYEEK Q+K + R WKL+S+ M+VD+ ++D++K+N+E
Sbjct: 410 KKSYEEKRQRKRGRSRPWKLKSLPMEVDD---RVDQDKLNSE 448
Score = 67.0 bits (162), Expect(3) = 3e-47
Identities = 29/48 (60%), Positives = 38/48 (79%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ F+GKV+ +KSR+ +Q VSHD K YN+K+T SVEIS ICRED+IC
Sbjct: 214 LEFIGKVAPVKSRSDKQLVSHDSKSNNYNYKYTFSVEISPICREDIIC 261
>ref|XP_003600668.1| 60S ribosomal export protein NMD3 [Medicago truncatula]
gi|355489716|gb|AES70919.1| 60S ribosomal export protein
NMD3 [Medicago truncatula]
Length = 505
Score = 102 bits (253), Expect(3) = 1e-43
Identities = 59/115 (51%), Positives = 73/115 (63%), Gaps = 8/115 (6%)
Frame = +2
Query: 2726 CVKRLK---NLNKVRLIHAEFIWTEPHSKRIKVKVRV*MG*FQIKLI*LS-----TFNRA 2881
C+K+L+ N+NK +L++AEFIWTEPHSKR+KVKV V + ++ S
Sbjct: 78 CLKKLQKNMNINKAKLVNAEFIWTEPHSKRVKVKVSVQKEVYHGAILEQSYPVEYVQQDH 137
Query: 2882 TCEFCSRGSANQDQRIAVVQLSQHAPQRRTF*NLGQLILKHDEAVVAIKTKQMDH 3046
CE CSR +AN DQ IA VQL QH RRTF L QLIL+H A AI+ KQMDH
Sbjct: 138 MCESCSRVAANPDQWIAAVQLRQHVSHRRTFYYLEQLILRHGAAARAIRIKQMDH 192
Score = 67.8 bits (164), Expect(3) = 1e-43
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +3
Query: 3045 MSFVGKVSTIKSRNGQQHVSHDEKGATYNFKHTLSVEISHICREDLIC 3188
+ FVGKV+ +KSR+ +Q VSHD K YN+K+T SVEIS ICREDLIC
Sbjct: 208 VEFVGKVAPVKSRSDKQLVSHDSKSNNYNYKYTFSVEISPICREDLIC 255
Score = 57.8 bits (138), Expect(3) = 1e-43
Identities = 51/157 (32%), Positives = 71/157 (45%), Gaps = 44/157 (28%)
Frame = +1
Query: 3241 DPLTLRM*YVIADQYWRIQVDNL---RNIYFWMW---NSFISEVNDGGTTYAPADFQVAH 3402
DPLTL+ ++ A+QYWR +L R + ++ SEVN GGT YA AD QVA
Sbjct: 284 DPLTLKFGFLDAEQYWRTSFKSLLTSRQLVEYIVLDVEVVSSEVNVGGTKYALADAQVAR 343
Query: 3403 VSNFGKKDL--------------------------------------ELLNAVLIKKSYE 3468
VS+FGK D + VLIKKSY
Sbjct: 344 VSDFGKNDTMFSIRTHLGHLLKPGDNALGYDLYAANSNDMELDRYKGNIPEVVLIKKSYP 403
Query: 3469 EKGQKKHVKPRAWKLESMNMKVDNSNRKLDEEKMNTE 3579
EK K R++KL+ + M+ D+ K++E+K + E
Sbjct: 404 EKR-----KTRSFKLKRIPMEADD-KIKVNEDKRSAE 434