BLASTX nr result
ID: Papaver27_contig00006793
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver27_contig00006793
(861 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28691.3| unnamed protein product [Vitis vinifera] 218 2e-54
ref|XP_006838265.1| hypothetical protein AMTR_s00103p00070570 [A... 209 1e-51
ref|XP_004290648.1| PREDICTED: ribosome-recycling factor, chloro... 207 3e-51
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro... 207 3e-51
ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloro... 207 3e-51
ref|XP_007050597.1| Ribosome recycling factor isoform 1 [Theobro... 203 8e-50
sp|P82231.1|RRFC_SPIOL RecName: Full=Ribosome-recycling factor, ... 202 1e-49
ref|XP_007050598.1| Ribosome recycling factor isoform 2 [Theobro... 201 4e-49
ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citr... 200 5e-49
ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloro... 199 9e-49
ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloro... 199 1e-48
gb|EXB39377.1| Ribosome-recycling factor [Morus notabilis] 198 2e-48
gb|ABK26473.1| unknown [Picea sitchensis] 198 2e-48
ref|XP_003562889.1| PREDICTED: ribosome-recycling factor, chloro... 197 3e-48
ref|XP_002302112.2| Ribosome recycling factor family protein [Po... 197 6e-48
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides] 196 1e-47
sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, ... 195 2e-47
ref|NP_001137010.1| hypothetical protein [Zea mays] gi|194697972... 195 2e-47
dbj|BAJ90140.1| predicted protein [Hordeum vulgare subsp. vulgar... 194 3e-47
ref|XP_002520737.1| ribosome recycling factor, putative [Ricinus... 194 4e-47
>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
Length = 274
Score = 218 bits (556), Expect = 2e-54
Identities = 127/254 (50%), Positives = 165/254 (64%), Gaps = 6/254 (2%)
Frame = +2
Query: 116 MAISFSSATSIRSLLSVRDSS----YNRATG--KCIPPLTAKASSLGASSNYVKFLDGSI 277
MA++FS AT +R++ + S Y R G KC + A +L +++NYV+ DG+
Sbjct: 1 MAMTFSPATPVRTIFQRKSLSPGGCYCRGPGYEKCHLNIGI-AFTLRSAANYVRLGDGAR 59
Query: 278 KFCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENFNGFRT 457
++ K VA + +KRTG+++CAT D K RMEKT+ETVR NFN RT
Sbjct: 60 EYSGKL-FVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSIRT 118
Query: 458 GRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVNSNLDL 637
GRA+P +LDR+EVEYYG+PVSLKSIAQI+TPD +SLL+QPYDKS LK+IEKAIV+S+L L
Sbjct: 119 GRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAIVSSDLGL 178
Query: 638 NPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXXXXXXX 817
P+NDGEVIRL++PQLTS+RR VA+RNIRRDA+
Sbjct: 179 TPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDALKAYEKLEKDKKLS 238
Query: 818 XDIVKDLSGDLQKV 859
D VKDLS DLQK+
Sbjct: 239 EDNVKDLSSDLQKL 252
>ref|XP_006838265.1| hypothetical protein AMTR_s00103p00070570 [Amborella trichopoda]
gi|548840733|gb|ERN00834.1| hypothetical protein
AMTR_s00103p00070570 [Amborella trichopoda]
Length = 273
Score = 209 bits (531), Expect = 1e-51
Identities = 116/210 (55%), Positives = 138/210 (65%)
Frame = +2
Query: 230 SLGASSNYVKFLDGSIKFCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRM 409
+L +SSNY K L G F + ++ + +R G +CAT +AK+RM
Sbjct: 43 ALSSSSNYGKSLLGPRNFF-ERSIPVNRNTNRRMGFCRCATIEEIEAEKSMIESEAKDRM 101
Query: 410 EKTLETVRENFNGFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKS 589
EKT+ET+R NFN RTGRASP MLDR+EVEYYG+PVSLKSIAQI+TPDGSSLL+QP+DKS
Sbjct: 102 EKTIETIRGNFNAVRTGRASPAMLDRVEVEYYGTPVSLKSIAQISTPDGSSLLVQPFDKS 161
Query: 590 CLKIIEKAIVNSNLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRR 769
CLK IEKAIV S+LD+ P+NDGEVIRL +P LTS+RR VAIRNIRR
Sbjct: 162 CLKDIEKAIVKSDLDVTPNNDGEVIRLNIPPLTSERRKDLLKIVAKQAEEGKVAIRNIRR 221
Query: 770 DAIXXXXXXXXXXXXXXDIVKDLSGDLQKV 859
DAI D VKDLS DLQKV
Sbjct: 222 DAIKAYEKLEKEKKLSEDNVKDLSSDLQKV 251
>ref|XP_004290648.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 281
Score = 207 bits (528), Expect = 3e-51
Identities = 117/236 (49%), Positives = 144/236 (61%)
Frame = +2
Query: 149 RSLLSVRDSSYNRATGKCIPPLTAKASSLGASSNYVKFLDGSIKFCCKAALVAGESGKKR 328
++LLS+RDS K P T S ++++YV G+ KF +V + +KR
Sbjct: 23 KALLSIRDSYGAGLVWKKCQPSTVNVCSWSSAASYVTPPGGAAKFSGNPIVVKKQLLQKR 82
Query: 329 TGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENFNGFRTGRASPTMLDRLEVEYYG 508
G + AT DAK RMEKT+ETVR NFN RTGRASP MLD++EV+YYG
Sbjct: 83 AGTVRAATIEEIEAEKSVIEKDAKGRMEKTIETVRSNFNSIRTGRASPAMLDKIEVDYYG 142
Query: 509 SPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVNSNLDLNPSNDGEVIRLTVPQLT 688
SPV LKS+AQI++PDG+SLLI PYDKS LK IEKAIV S+L + P+NDGEVIRLT+PQLT
Sbjct: 143 SPVGLKSLAQISSPDGTSLLISPYDKSSLKSIEKAIVASDLGMTPNNDGEVIRLTLPQLT 202
Query: 689 SDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXXXXXXXXDIVKDLSGDLQK 856
SDRR VA+RNIRRDA+ D +KD S DLQK
Sbjct: 203 SDRRKELTKVVSKQAEEGKVALRNIRRDALKAYEKLQKEKKLSEDTLKDFSSDLQK 258
>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 207 bits (528), Expect = 3e-51
Identities = 127/258 (49%), Positives = 156/258 (60%), Gaps = 10/258 (3%)
Frame = +2
Query: 116 MAISFSSATSIR----------SLLSVRDSSYNRATGKCIPPLTAKASSLGASSNYVKFL 265
MA FS+ SIR SLLS+RD + KC +TA S ++SNYV+
Sbjct: 1 MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKC-GSITAHLCSWKSASNYVRLN 59
Query: 266 DGSIKFCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENFN 445
++ + + V+G K R V + AT D K RMEKT++TVR NFN
Sbjct: 60 RQALVISTQLS-VSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFN 118
Query: 446 GFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVNS 625
RTGR++P MLD++EVEYYGSPVSLKSIAQI+TPD SSLL+QPYDKS LK IEKAIVNS
Sbjct: 119 SIRTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNS 178
Query: 626 NLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXXX 805
+L + P+NDGEVIRLT+PQLTS+RR VA+RNIRRDA+
Sbjct: 179 DLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKE 238
Query: 806 XXXXXDIVKDLSGDLQKV 859
D VKDLS DLQK+
Sbjct: 239 KKLSEDNVKDLSSDLQKL 256
>ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Vitis
vinifera]
Length = 280
Score = 207 bits (528), Expect = 3e-51
Identities = 125/260 (48%), Positives = 163/260 (62%), Gaps = 14/260 (5%)
Frame = +2
Query: 122 ISFSSATSIRSLLSVRDSS----YNRATG--KCIPPLTAKASSLGASSNYVKFLDGSIKF 283
++FS AT +R++ + S Y R G KC + A +L +++NYV+ DG+ ++
Sbjct: 1 MTFSPATPVRTIFQRKSLSPGGCYCRGPGYEKCHLNIGI-AFTLRSAANYVRLGDGAREY 59
Query: 284 CCKAALVAGESGKKR--------TGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVREN 439
K VA + +KR TG+++CAT D K RMEKT+ETVR N
Sbjct: 60 SGKL-FVAKRNFQKRQVESYGYKTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTN 118
Query: 440 FNGFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIV 619
FN RTGRA+P +LDR+EVEYYG+PVSLKSIAQI+TPD +SLL+QPYDKS LK+IEKAIV
Sbjct: 119 FNSIRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAIV 178
Query: 620 NSNLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXX 799
+S+L L P+NDGEVIRL++PQLTS+RR VA+RNIRRDA+
Sbjct: 179 SSDLGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDALKAYEKLE 238
Query: 800 XXXXXXXDIVKDLSGDLQKV 859
D VKDLS DLQK+
Sbjct: 239 KDKKLSEDNVKDLSSDLQKL 258
>ref|XP_007050597.1| Ribosome recycling factor isoform 1 [Theobroma cacao]
gi|508702858|gb|EOX94754.1| Ribosome recycling factor
isoform 1 [Theobroma cacao]
Length = 277
Score = 203 bits (516), Expect = 8e-50
Identities = 121/259 (46%), Positives = 151/259 (58%), Gaps = 11/259 (4%)
Frame = +2
Query: 116 MAISFSSATSI-----------RSLLSVRDSSYNRATGKCIPPLTAKASSLGASSNYVKF 262
MA FSS +++ +S LS DS S +++NY +
Sbjct: 1 MAAPFSSTSTVGSIFRPNPNPPKSFLSPSDSFQKGFDCVKCRSTDVNVYSWSSAANYARL 60
Query: 263 LDGSIKFCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENF 442
G+ K K +V +KR GV +CAT DAK RMEKT+ETVR NF
Sbjct: 61 RHGASKLSGKPFVVL----RKRAGVLRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNF 116
Query: 443 NGFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVN 622
N RTGRA+P +LD++EVEYYG+PVSLKSIAQI+TPD SSLL+QPYDKS LK IEKAIVN
Sbjct: 117 NSIRTGRANPAILDKVEVEYYGTPVSLKSIAQISTPDSSSLLVQPYDKSSLKAIEKAIVN 176
Query: 623 SNLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXX 802
S+L + P+NDGEVIRL++PQLT++RR VA+RNIRRDA+
Sbjct: 177 SDLGMTPNNDGEVIRLSLPQLTTERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEK 236
Query: 803 XXXXXXDIVKDLSGDLQKV 859
D VKDLS DLQK+
Sbjct: 237 EKKLSEDNVKDLSSDLQKL 255
>sp|P82231.1|RRFC_SPIOL RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
AltName: Full=CpFrr; AltName: Full=RRFHCP; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor gi|4689034|emb|CAB41419.1| chloroplast
ribosome recycling factor protein [Spinacia oleracea]
Length = 271
Score = 202 bits (514), Expect = 1e-49
Identities = 122/245 (49%), Positives = 144/245 (58%)
Frame = +2
Query: 125 SFSSATSIRSLLSVRDSSYNRATGKCIPPLTAKASSLGASSNYVKFLDGSIKFCCKAALV 304
SF S SL V D N A S +S+NYV+ G KF KA +V
Sbjct: 15 SFRRRNSCVSLQGVSDMECNIAR--------TNVSVWRSSANYVRMDCGVKKFSGKAVVV 66
Query: 305 AGESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENFNGFRTGRASPTMLD 484
+ + R G ++CAT + K RMEKT+ET+R NFN RT RASPTMLD
Sbjct: 67 --KQLQNRAGTFRCATMEEVEAEKSLIETNTKQRMEKTIETIRSNFNSVRTNRASPTMLD 124
Query: 485 RLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVNSNLDLNPSNDGEVI 664
R+EVEYYG+PVSLKSIAQI+TPD SSLLI PYDKS LK IEKAIV S L ++P+NDGEVI
Sbjct: 125 RIEVEYYGTPVSLKSIAQISTPDASSLLISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVI 184
Query: 665 RLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXXXXXXXXDIVKDLSG 844
RL++P LTSDRR VA+RNIRRDA+ D VKDLS
Sbjct: 185 RLSLPPLTSDRRKELAKVVSKLAEEGKVAVRNIRRDALKSYEKLEKEKKLSEDNVKDLSA 244
Query: 845 DLQKV 859
DLQK+
Sbjct: 245 DLQKL 249
>ref|XP_007050598.1| Ribosome recycling factor isoform 2 [Theobroma cacao]
gi|508702859|gb|EOX94755.1| Ribosome recycling factor
isoform 2 [Theobroma cacao]
Length = 300
Score = 201 bits (510), Expect = 4e-49
Identities = 120/257 (46%), Positives = 149/257 (57%), Gaps = 11/257 (4%)
Frame = +2
Query: 116 MAISFSSATSI-----------RSLLSVRDSSYNRATGKCIPPLTAKASSLGASSNYVKF 262
MA FSS +++ +S LS DS S +++NY +
Sbjct: 1 MAAPFSSTSTVGSIFRPNPNPPKSFLSPSDSFQKGFDCVKCRSTDVNVYSWSSAANYARL 60
Query: 263 LDGSIKFCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENF 442
G+ K K +V +KR GV +CAT DAK RMEKT+ETVR NF
Sbjct: 61 RHGASKLSGKPFVVL----RKRAGVLRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNF 116
Query: 443 NGFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVN 622
N RTGRA+P +LD++EVEYYG+PVSLKSIAQI+TPD SSLL+QPYDKS LK IEKAIVN
Sbjct: 117 NSIRTGRANPAILDKVEVEYYGTPVSLKSIAQISTPDSSSLLVQPYDKSSLKAIEKAIVN 176
Query: 623 SNLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXX 802
S+L + P+NDGEVIRL++PQLT++RR VA+RNIRRDA+
Sbjct: 177 SDLGMTPNNDGEVIRLSLPQLTTERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEK 236
Query: 803 XXXXXXDIVKDLSGDLQ 853
D VKDLS DLQ
Sbjct: 237 EKKLSEDNVKDLSSDLQ 253
>ref|XP_006444064.1| hypothetical protein CICLE_v10021605mg [Citrus clementina]
gi|568852089|ref|XP_006479713.1| PREDICTED:
ribosome-recycling factor, chloroplastic-like [Citrus
sinensis] gi|557546326|gb|ESR57304.1| hypothetical
protein CICLE_v10021605mg [Citrus clementina]
Length = 276
Score = 200 bits (509), Expect = 5e-49
Identities = 119/259 (45%), Positives = 149/259 (57%), Gaps = 11/259 (4%)
Frame = +2
Query: 116 MAISFSSATSIRSLLSVR-----------DSSYNRATGKCIPPLTAKASSLGASSNYVKF 262
MA FSS +RS+ ++ DS + RA + +++NY +
Sbjct: 1 MATHFSSTGPMRSIFQLKSNPPKCLLFLPDSCHRRAETATCRASSVSVRQWSSAANYSRL 60
Query: 263 LDGSIKFCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENF 442
+ S K +V + KR GV +CAT D K RME+T++ VR NF
Sbjct: 61 VKLSNK-----PIVVRQLAHKRNGVVRCATIEEIEAEKSSIEKDVKARMERTIDMVRTNF 115
Query: 443 NGFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVN 622
N RTGR++P MLD++EVEYYGSPVSLKSIAQI TPD SSLLIQPYDKS LK IEKAIV+
Sbjct: 116 NSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVS 175
Query: 623 SNLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXX 802
S+L + P+NDGEVIRLT+PQLTS+RR VA+RNIRRDA+
Sbjct: 176 SDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLQK 235
Query: 803 XXXXXXDIVKDLSGDLQKV 859
D VKDLS DLQK+
Sbjct: 236 EKKLSEDNVKDLSSDLQKL 254
>ref|XP_006349681.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Solanum
tuberosum]
Length = 267
Score = 199 bits (507), Expect = 9e-49
Identities = 114/217 (52%), Positives = 135/217 (62%)
Frame = +2
Query: 209 PLTAKASSLGASSNYVKFLDGSIKFCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXX 388
P + AS+NY G+ + LV GK R+G+ +CAT
Sbjct: 33 PTSGNVVCWSASANYSSLWVGARRL---QPLVKPSWGK-RSGIVRCATIEEIEAEKSSIE 88
Query: 389 XDAKNRMEKTLETVRENFNGFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLL 568
D K RMEKT+ETVR NFN RTGRASP MLD++EV+YYG+PVSLKSIAQI+TPD SS+L
Sbjct: 89 KDVKERMEKTVETVRSNFNSIRTGRASPAMLDKIEVDYYGTPVSLKSIAQISTPDASSIL 148
Query: 569 IQPYDKSCLKIIEKAIVNSNLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXV 748
+QPYDKS LK IEKAIV+S++ + P+NDGEVIRL VPQLTSDRR V
Sbjct: 149 VQPYDKSSLKAIEKAIVSSDVGMTPNNDGEVIRLAVPQLTSDRRKELSKIVSKQAEEGKV 208
Query: 749 AIRNIRRDAIXXXXXXXXXXXXXXDIVKDLSGDLQKV 859
AIRNIRRDA+ D VKDLS DLQKV
Sbjct: 209 AIRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKV 245
>ref|XP_004247170.1| PREDICTED: ribosome-recycling factor, chloroplastic-like isoform 1
[Solanum lycopersicum]
Length = 267
Score = 199 bits (506), Expect = 1e-48
Identities = 121/251 (48%), Positives = 147/251 (58%), Gaps = 3/251 (1%)
Frame = +2
Query: 116 MAISFSSATSIRSLLSVRDSSYNRATGKCIP---PLTAKASSLGASSNYVKFLDGSIKFC 286
M I+ S AT +R L + + C P + AS+NY G+ +
Sbjct: 1 MTIALSPATPVRLLC--QQQLTRKPVLFCFQDKFPTSGNVVCWSASANYSSLWVGARRL- 57
Query: 287 CKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENFNGFRTGRA 466
LV GK R+G+ +CAT D K RMEKT+ETVR NFN RTGRA
Sbjct: 58 --QPLVKPSWGK-RSGIVRCATIEEIEAEKSSIEKDVKERMEKTVETVRSNFNSIRTGRA 114
Query: 467 SPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVNSNLDLNPS 646
SP MLD++EV+YYG+PVSLKSIAQI+TPD +S+L+QPYDKS LK IEKAIV+S++ + P+
Sbjct: 115 SPAMLDKIEVDYYGTPVSLKSIAQISTPDATSILVQPYDKSSLKAIEKAIVSSDVGMTPN 174
Query: 647 NDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXXXXXXXXDI 826
NDGEVIRL VPQLTSDRR VAIRNIRRDA+ D
Sbjct: 175 NDGEVIRLAVPQLTSDRRKELSKIVSKQAEEGKVAIRNIRRDALKAYEKLEKEKKLSEDN 234
Query: 827 VKDLSGDLQKV 859
VKDLS DLQKV
Sbjct: 235 VKDLSSDLQKV 245
>gb|EXB39377.1| Ribosome-recycling factor [Morus notabilis]
Length = 312
Score = 198 bits (504), Expect = 2e-48
Identities = 117/243 (48%), Positives = 145/243 (59%), Gaps = 1/243 (0%)
Frame = +2
Query: 134 SATSIRSLLSVRDS-SYNRATGKCIPPLTAKASSLGASSNYVKFLDGSIKFCCKAALVAG 310
S +R +LS R S KC+P S G++++YV+ DG+ K
Sbjct: 19 SQNPLRIVLSFRASYGGGPVCAKCMPS-RVNVCSWGSAASYVRLRDGTDK---------- 67
Query: 311 ESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENFNGFRTGRASPTMLDRL 490
GV + AT D K RMEK++ETVR NFN RTGRA+P MLD++
Sbjct: 68 ------VGVVRAATIEEIEAEKSLIEKDVKERMEKSIETVRTNFNSVRTGRANPAMLDKI 121
Query: 491 EVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVNSNLDLNPSNDGEVIRL 670
EVEYYGSPVSLKSIAQI+TPD SSLL+QPYDKS LK+IEKAIV+S+L + P+NDG+VIRL
Sbjct: 122 EVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKVIEKAIVSSDLGMTPNNDGDVIRL 181
Query: 671 TVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXXXXXXXXDIVKDLSGDL 850
T+PQLTS+RR VA+RNIRRDA+ D VKDLS DL
Sbjct: 182 TLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDL 241
Query: 851 QKV 859
QK+
Sbjct: 242 QKL 244
>gb|ABK26473.1| unknown [Picea sitchensis]
Length = 279
Score = 198 bits (504), Expect = 2e-48
Identities = 122/260 (46%), Positives = 154/260 (59%), Gaps = 12/260 (4%)
Frame = +2
Query: 116 MAISFSSATSIRSLLSVR---DSSYNRAT-----GKCIPPLTAKASSLGASS--NYVKFL 265
MA +FS A S ++ S+R ++S+ +A G+C +A++ G + ++ L
Sbjct: 1 MATTFSCALSGSTIASIRRGHEASFGQAYEAKVFGRCH---CVQANTFGGRKVPHVIRSL 57
Query: 266 DGSIKFCCKAALVAGESGKK--RTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVREN 439
F K+ V ++ RTGV +CAT DA RMEKTLET++ N
Sbjct: 58 TSRDNFFGKSLSVTFSHKERNVRTGVCRCATIEEIEAEKQLIEEDAIERMEKTLETIKTN 117
Query: 440 FNGFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIV 619
FN RTGRASP LDR+EVEYYGSPV+LKS+AQ++ PDG +LL+QPYDKS LK IEKAI
Sbjct: 118 FNSIRTGRASPAFLDRVEVEYYGSPVNLKSLAQVSVPDGGTLLVQPYDKSSLKSIEKAIS 177
Query: 620 NSNLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXX 799
SNL L PSNDG VIRL++PQLTS+RR +AIRNIRRDAI
Sbjct: 178 KSNLGLTPSNDGNVIRLSIPQLTSERRKELLKVVAKIAEEGKIAIRNIRRDAIKAYEKLE 237
Query: 800 XXXXXXXDIVKDLSGDLQKV 859
D VKDLSGDLQKV
Sbjct: 238 KEKKLSEDNVKDLSGDLQKV 257
>ref|XP_003562889.1| PREDICTED: ribosome-recycling factor, chloroplastic-like
[Brachypodium distachyon]
Length = 266
Score = 197 bits (502), Expect = 3e-48
Identities = 113/216 (52%), Positives = 140/216 (64%)
Frame = +2
Query: 212 LTAKASSLGASSNYVKFLDGSIKFCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXX 391
L++++S L +S+N++K G++ F A LV S K+ V + AT
Sbjct: 32 LSSRSSLLSSSTNFMKLHSGAVGFF-SAPLVIQYSDKR--AVLRHATIEEIEAEKTIIED 88
Query: 392 DAKNRMEKTLETVRENFNGFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLI 571
AK +MEK +ETV+ NFN RTGRA+P MLDR+EVEYYG+PV+LKSIAQI TPD +SLLI
Sbjct: 89 QAKEKMEKAIETVQTNFNTVRTGRANPAMLDRIEVEYYGTPVNLKSIAQINTPDATSLLI 148
Query: 572 QPYDKSCLKIIEKAIVNSNLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVA 751
QPYDK+CLK+IEKAIV +N+ + PSNDGEVIR+TVP LTSDRR VA
Sbjct: 149 QPYDKTCLKLIEKAIVAANIGVTPSNDGEVIRVTVPPLTSDRRKEMTKTVAKLSEEGKVA 208
Query: 752 IRNIRRDAIXXXXXXXXXXXXXXDIVKDLSGDLQKV 859
IRNIRRDAI D VKDLS DLQK+
Sbjct: 209 IRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKL 244
>ref|XP_002302112.2| Ribosome recycling factor family protein [Populus trichocarpa]
gi|550344331|gb|EEE81385.2| Ribosome recycling factor
family protein [Populus trichocarpa]
Length = 286
Score = 197 bits (500), Expect = 6e-48
Identities = 119/241 (49%), Positives = 151/241 (62%), Gaps = 4/241 (1%)
Frame = +2
Query: 149 RSLLSVRDSSYNRATGK---CIPPLTAKASSLGASS-NYVKFLDGSIKFCCKAALVAGES 316
++LLS+ S++R + C + A + SL +SS NY +GS K K V
Sbjct: 26 KALLSL-PGSFHRGPHRAKVCYNSIGATSVSLWSSSANYSSLRNGSTKLSGKPVAVK-RL 83
Query: 317 GKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENFNGFRTGRASPTMLDRLEV 496
+ R GV + AT DAK RMEKT++T+R NFN RTGRA+P+MLD++EV
Sbjct: 84 LQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDTMRANFNSVRTGRANPSMLDKIEV 143
Query: 497 EYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVNSNLDLNPSNDGEVIRLTV 676
EYYG+PVSLKSIAQI+TPD SSLL+QPYDKS LK IEKAIV+S+L L P+NDGEVIR+++
Sbjct: 144 EYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSI 203
Query: 677 PQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXXXXXXXXDIVKDLSGDLQK 856
PQLTS+RR VA+RNIRRDA+ D VKDLS DLQK
Sbjct: 204 PQLTSERRKELSKMVAKLAEEGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQK 263
Query: 857 V 859
+
Sbjct: 264 L 264
>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 286
Score = 196 bits (498), Expect = 1e-47
Identities = 111/214 (51%), Positives = 136/214 (63%)
Frame = +2
Query: 218 AKASSLGASSNYVKFLDGSIKFCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXXDA 397
A S +S+NY +GS K K V + R GV + AT DA
Sbjct: 52 ASVSLWSSSANYSSLRNGSSKLSGKPVAVK-RLLQNRRGVVRNATIEEIEAEKSLIEDDA 110
Query: 398 KNRMEKTLETVRENFNGFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQP 577
K RMEKT++T+R NFN RTGRA+P+MLD++EVEYYG+PVSLKSIAQI+TPD SSLL+QP
Sbjct: 111 KGRMEKTIDTMRTNFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQP 170
Query: 578 YDKSCLKIIEKAIVNSNLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIR 757
YDKS LK IEKAIV+S+L L P+NDGEVIR+++PQLTS+RR VA+R
Sbjct: 171 YDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALR 230
Query: 758 NIRRDAIXXXXXXXXXXXXXXDIVKDLSGDLQKV 859
NIRRDA+ D VKDLS DLQK+
Sbjct: 231 NIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQKL 264
>sp|P37706.2|RRFC_DAUCA RecName: Full=Ribosome-recycling factor, chloroplastic; Short=RRF;
AltName: Full=Nuclear located protein D2; AltName:
Full=Ribosome-releasing factor, chloroplastic; Flags:
Precursor
Length = 227
Score = 195 bits (496), Expect = 2e-47
Identities = 107/207 (51%), Positives = 133/207 (64%)
Frame = +2
Query: 239 ASSNYVKFLDGSIKFCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKT 418
A++NYVK G+ KF K +++ +KRTG KCAT K RMEKT
Sbjct: 3 AAANYVKIKVGTGKFARKTVVLS----QKRTGTLKCATMEEIEAEKSLIEKSVKERMEKT 58
Query: 419 LETVRENFNGFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLK 598
+E V+ +FN RT R++P MLD+++VEYYG+P SLKSIAQI+TPD SSLL+ PYDKS LK
Sbjct: 59 IENVKASFNSIRTXRSNPDMLDKIKVEYYGTPTSLKSIAQISTPDSSSLLVNPYDKSSLK 118
Query: 599 IIEKAIVNSNLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAI 778
IEKAIVNS+L + P+NDG+VIRL++PQLT+DRR VA+RNIRRDAI
Sbjct: 119 DIEKAIVNSDLGITPNNDGDVIRLSIPQLTADRRKELSKIVAKQAEEGKVALRNIRRDAI 178
Query: 779 XXXXXXXXXXXXXXDIVKDLSGDLQKV 859
D VKDLS DLQKV
Sbjct: 179 KSYDKLEKEKKLSEDNVKDLSSDLQKV 205
>ref|NP_001137010.1| hypothetical protein [Zea mays] gi|194697972|gb|ACF83070.1| unknown
[Zea mays] gi|223972995|gb|ACN30685.1| unknown [Zea
mays] gi|413941645|gb|AFW74294.1| hypothetical protein
ZEAMMB73_186637 [Zea mays] gi|413941646|gb|AFW74295.1|
hypothetical protein ZEAMMB73_186637 [Zea mays]
Length = 266
Score = 195 bits (495), Expect = 2e-47
Identities = 122/250 (48%), Positives = 151/250 (60%), Gaps = 2/250 (0%)
Frame = +2
Query: 116 MAISFSSATSIRSLLSVRDSSYNRATG-KCIPPLTAKASSLGASSNYVKFL-DGSIKFCC 289
MA+ S ++ S L S + +G C+P ++ ++ +S+N+ + L DG + F
Sbjct: 1 MALHAVSPAAVSSPLRALSRSLPQRSGCGCLPK---QSVTICSSTNFARKLQDGPVDFAA 57
Query: 290 KAALVAGESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENFNGFRTGRAS 469
+ LV G S K+ V AT AK +MEK +ETV+ NFN RTGRAS
Sbjct: 58 RR-LVLGHSDKR--AVLTHATIEEIEAEKSLIEDQAKEKMEKAIETVQTNFNTVRTGRAS 114
Query: 470 PTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVNSNLDLNPSN 649
P MLDR+EVEYYG+PV+LKSIAQI+TPD +SLLIQPYDKS LK+IEK IV +NL + PSN
Sbjct: 115 PAMLDRIEVEYYGTPVNLKSIAQISTPDATSLLIQPYDKSSLKLIEKTIVAANLGVTPSN 174
Query: 650 DGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXXXXXXXXDIV 829
DGEVIR+TVP LTSDRR VAIRNIRRDAI D V
Sbjct: 175 DGEVIRVTVPPLTSDRRKELAKTVAKLAEDGKVAIRNIRRDAIKAYDKLQKEKKLSEDNV 234
Query: 830 KDLSGDLQKV 859
KDLS DLQKV
Sbjct: 235 KDLSADLQKV 244
>dbj|BAJ90140.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326512904|dbj|BAK03359.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 266
Score = 194 bits (494), Expect = 3e-47
Identities = 110/216 (50%), Positives = 138/216 (63%)
Frame = +2
Query: 212 LTAKASSLGASSNYVKFLDGSIKFCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXX 391
L+ ++S L + +N++K G++ F LV S K+ V + AT
Sbjct: 32 LSNRSSLLSSPTNFMKIQSGAVGFF-GVPLVLQHSDKR--AVLRHATNEEIEEEKTIVEE 88
Query: 392 DAKNRMEKTLETVRENFNGFRTGRASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLI 571
AK +MEK +ETV+ NFN RTGRA+P+MLDR+EVEYYG+PV+LK+IAQ+ TPD +SLLI
Sbjct: 89 QAKEKMEKAIETVQSNFNTVRTGRANPSMLDRIEVEYYGTPVNLKTIAQVNTPDATSLLI 148
Query: 572 QPYDKSCLKIIEKAIVNSNLDLNPSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVA 751
QPYDKSCLK+IEKAIV +N+ + PSNDGEVIR+TVP LTSDRR VA
Sbjct: 149 QPYDKSCLKLIEKAIVAANIGVTPSNDGEVIRVTVPPLTSDRRKEMTKTVAKLSEEGKVA 208
Query: 752 IRNIRRDAIXXXXXXXXXXXXXXDIVKDLSGDLQKV 859
IRNIRRDAI D VKDLS DLQK+
Sbjct: 209 IRNIRRDAIKAYDKLEKEKKLSEDNVKDLSADLQKI 244
>ref|XP_002520737.1| ribosome recycling factor, putative [Ricinus communis]
gi|223540122|gb|EEF41699.1| ribosome recycling factor,
putative [Ricinus communis]
Length = 247
Score = 194 bits (493), Expect = 4e-47
Identities = 122/251 (48%), Positives = 148/251 (58%), Gaps = 5/251 (1%)
Frame = +2
Query: 116 MAISFSSATSIRSLLSVRDSSYNRATGKCIPPLTAKAS-----SLGASSNYVKFLDGSIK 280
MA FSS S ++LLS+ K IP + S + A N+ S
Sbjct: 1 MATQFSSKPSFKTLLSLPAC---HTVLKIIPTVPVCVSGTRLLATPAPPNFPANRSLSNT 57
Query: 281 FCCKAALVAGESGKKRTGVWKCATXXXXXXXXXXXXXDAKNRMEKTLETVRENFNGFRTG 460
+C + GK+ G +CAT DAK RMEKT+ETVR NFN RTG
Sbjct: 58 WC--------KRGKR--GFVRCATIEEIEAEKSSIEKDAKARMEKTIETVRTNFNSIRTG 107
Query: 461 RASPTMLDRLEVEYYGSPVSLKSIAQITTPDGSSLLIQPYDKSCLKIIEKAIVNSNLDLN 640
RA+P+MLD++EVEYYG+PVSLKSIAQI+TPD SSLL+QPYDKS LK IEKAIV+S+L L
Sbjct: 108 RANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVSSDLGLT 167
Query: 641 PSNDGEVIRLTVPQLTSDRRXXXXXXXXXXXXXXXVAIRNIRRDAIXXXXXXXXXXXXXX 820
P+NDGEVIRL++PQLTS+RR VA+RNIRRDA+
Sbjct: 168 PNNDGEVIRLSIPQLTSERRKEMSKMVAKLAEEGKVALRNIRRDALKAYEKLEKEKKLSE 227
Query: 821 DIVKDLSGDLQ 853
D VKDLSGDLQ
Sbjct: 228 DNVKDLSGDLQ 238