BLASTX nr result

ID: Papaver27_contig00005388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00005388
         (636 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313723.2| hypothetical protein POPTR_0009s13460g [Popu...    59   1e-06
ref|XP_002305502.1| cold-shock DNA-binding family protein [Popul...    56   8e-06

>ref|XP_002313723.2| hypothetical protein POPTR_0009s13460g [Populus trichocarpa]
           gi|550331651|gb|EEE87678.2| hypothetical protein
           POPTR_0009s13460g [Populus trichocarpa]
          Length = 168

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 28/61 (45%), Positives = 30/61 (49%)
 Frame = +3

Query: 138 CYSCGESGHLARDCXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCYNCQGTGHFARECPKA 317
           CYSCGESGH+ARDC                             CYNC GTGHFARECP +
Sbjct: 111 CYSCGESGHMARDCPQGGGGGGGGGRYGGGSGGGGGGGG----CYNCGGTGHFARECPNS 166

Query: 318 G 320
           G
Sbjct: 167 G 167


>ref|XP_002305502.1| cold-shock DNA-binding family protein [Populus trichocarpa]
           gi|222848466|gb|EEE86013.1| cold-shock DNA-binding
           family protein [Populus trichocarpa]
          Length = 207

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 26/61 (42%), Positives = 30/61 (49%)
 Frame = +3

Query: 138 CYSCGESGHLARDCXXXXXXXXXXXXXXXXXXXXXXXXXXXXQCYNCQGTGHFARECPKA 317
           CYSCGESGH+ARDC                             CYNC G+GHFAR+CP +
Sbjct: 147 CYSCGESGHMARDCPQGGSGGGGGGGRYGGGNGGGGGGGGGG-CYNCGGSGHFARDCPNS 205

Query: 318 G 320
           G
Sbjct: 206 G 206