BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver27_contig00000645
         (3563 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...  1642   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]             1617   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...  1613   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...  1612   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...  1596   0.0  
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...  1595   0.0  
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob...  1593   0.0  
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub...  1593   0.0  
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun...  1570   0.0  
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...  1569   0.0  
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub...  1566   0.0  
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...  1561   0.0  
gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus...  1559   0.0  
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...  1538   0.0  
gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus n...  1534   0.0  
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub...  1529   0.0  
ref|XP_007136942.1| hypothetical protein PHAVU_009G087100g [Phas...  1521   0.0  
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV a...  1515   0.0  
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...  1512   0.0  
ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV a...  1511   0.0  

>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score = 1642 bits (4253), Expect = 0.0
 Identities = 803/1187 (67%), Positives = 964/1187 (81%), Gaps = 6/1187 (0%)
 Frame = +3

Query: 21   KTSNGGSVSEKASTSTFTDQEPINLSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVE 200
            K SNG  V  +         E  +L++E+L  FCK ++VSFF EYGLI HQI S+N F++
Sbjct: 19   KLSNG--VQMEIDDDLMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIK 76

Query: 201  HGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEK 380
            +GIQ++FDS   I VEPG+DPSK+GEG+W+YA+V FGKV L++P  W GE     D KE 
Sbjct: 77   NGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKES 132

Query: 381  YLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHS-VQKQVISEDERDV 557
             L   PRHARLQNMTYS+RMK  V  +VYTQ L+++DK+K+GK++  V+K+VI ED RD+
Sbjct: 133  -LNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDI 191

Query: 558  VIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTW 737
            +IGRIPVMVKS +CW+NG+++ DC++D GGYF++KGAEK FIAQEQ+CL RLWV  +PTW
Sbjct: 192  LIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTW 251

Query: 738  LVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSD 917
            +V YR    + KR+RV ++++  P  ++    G KVLT++F S +IP+WI+FFALG SSD
Sbjct: 252  MVAYRP---IWKRKRVYVKLE--PPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSD 306

Query: 918  KEIVDTIEVDISDARTVNILLATINNAEKACQA----FSKEREALKYMDGQIKNTKFPPV 1085
            KE+VD I+ +I DA   NIL+A+I+ A++  +     F ++  A+ ++D  +K+ KFPP 
Sbjct: 307  KEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPG 366

Query: 1086 EEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXX 1265
            E I+E I KYLFP+ +G KQKA FLGYMVK L   YTGRRKC+NRDDFRNK         
Sbjct: 367  ESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELL 426

Query: 1266 XXXXXXHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKK 1445
                  HI HA+R+M + MQ++LYGDR ++PI+ YLDASIITNGLSRAFSTG W+HPFK+
Sbjct: 427  ERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKR 486

Query: 1446 SEKIAGVVANLRRLNPLQMASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEK 1625
             E+I+GVVA LRR NPLQM +D+RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE 
Sbjct: 487  MERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 546

Query: 1626 CGLVKNMAITGLVSTNLMEPLNDKLFDCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDD 1805
            CGLVKN+AITGLVST +++PL DKLFDCGMEKLVDD  S    GK+KVF++GDWVGVC+D
Sbjct: 547  CGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDT-STKLSGKNKVFLDGDWVGVCED 605

Query: 1806 SLSFVTDLKHSRRSKRIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLVKGG 1985
             +SFV +L+  RR K +P QVEIK D + GEVRIFSDAGRILRPLL+VEN+KK+K  KG 
Sbjct: 606  PISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGD 665

Query: 1986 -YNFQSLLXXXXXXXXXXXXXXXCQTAWGIKYLFLGEKEQPPLYYTHCELDLSFLLGLSC 2162
             + FQSLL               C TAWGIKYL  G  + PP+ YTHCELD+SFLLGLSC
Sbjct: 666  DFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGH-DDPPVKYTHCELDMSFLLGLSC 724

Query: 2163 GIIPFANHDHARRVLYQSEKHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCL 2342
            GIIP+ANHDHARRVLYQSEKHSQQA+G+STTNPNIRVDTLS QLYYPQRPLFRTMISDCL
Sbjct: 725  GIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCL 784

Query: 2343 GLPAFPQGQNGVLAKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSY 2522
            G P + +G  G++ +PEYFNGQ AIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RSY
Sbjct: 785  GKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 844

Query: 2523 KAEVDNMELFEAKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAE 2702
            K+EVDN E  + KR K +D V FGK QSKIGRVDSLDDDGFP+IGANLQ GDIVIGRCAE
Sbjct: 845  KSEVDNNESLDKKR-KSEDSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAE 903

Query: 2703 SGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGL 2882
            SG DHSIKLKHTE+G VQKVV++AND+G+NFAVVSLRQ+R+P LGDKFSSMHGQKGV+G 
Sbjct: 904  SGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGF 963

Query: 2883 LESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSI 3062
            LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKGIACGG +R+ATPF+T S+
Sbjct: 964  LESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSV 1023

Query: 3063 DEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVH 3242
            D I +QLHRAGFSRWG ERVYNG++GEM+RSLIFMGPTFYQRL HMAEDKVK+RNTGPVH
Sbjct: 1024 DAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVH 1083

Query: 3243 PLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANV 3422
            PLTRQPV+DRKRFGG+KFGEMERDCL+AHGA+ANLHERLFTLSD + MH+C +C NI+NV
Sbjct: 1084 PLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNV 1143

Query: 3423 IQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGI 3563
            IQRSV GG  K+RG YCR+C+S+E IVKV++PYGAKLLCQELFSMGI
Sbjct: 1144 IQRSVAGGR-KVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGI 1189


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score = 1617 bits (4188), Expect = 0.0
 Identities = 798/1187 (67%), Positives = 955/1187 (80%), Gaps = 6/1187 (0%)
 Frame = +3

Query: 21   KTSNGGSVSEKASTSTFTDQEPINLSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVE 200
            K SNG  V  +         E  +L++E+L  FCK ++VSFF EYGLI HQI S+N F++
Sbjct: 55   KLSNG--VQMEIDDDLMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIK 112

Query: 201  HGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEK 380
            +GIQ++FDS   I VEPG+DPSK+GEG+W+YA+V FGKV L++P  W GE     D KE 
Sbjct: 113  NGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKES 168

Query: 381  YLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHS-VQKQVISEDERDV 557
             L   PRHARLQNMTYS+RMK  V  +VYTQ L+++DK+K+GK++  V+K+VI ED RD+
Sbjct: 169  -LNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDI 227

Query: 558  VIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTW 737
            +IGRIPVMVKS +CW+NG+++ DC++D GGYF++KGAEK FIAQEQ+CL RLWV  +PTW
Sbjct: 228  LIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTW 287

Query: 738  LVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSD 917
            +V YR    + KR+RV ++++  P  ++    G KVLT++F S +IP+WI+FFALG SSD
Sbjct: 288  MVAYRP---IWKRKRVYVKLE--PPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSD 342

Query: 918  KEIVDTIEVDISDARTVNILLATINNAEKACQA----FSKEREALKYMDGQIKNTKFPPV 1085
            KE+VD I+ +I DA   NIL+A+I+ A++  +     F ++  A+ ++D  +K+ KFPP 
Sbjct: 343  KEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPG 402

Query: 1086 EEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXX 1265
            E I+E I KYLFP+ +G KQKA FLGYMVK L   YTGRRKC+NRDDFRNK         
Sbjct: 403  ESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELL 462

Query: 1266 XXXXXXHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKK 1445
                  HI HA+R+M + MQ++LYGDR ++PI+ YLDASIITNGLSRAFSTG W+HPFK+
Sbjct: 463  ERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKR 522

Query: 1446 SEKIAGVVANLRRLNPLQMASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEK 1625
             E+I+GVVA LRR NPLQM +D+RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE 
Sbjct: 523  MERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 582

Query: 1626 CGLVKNMAITGLVSTNLMEPLNDKLFDCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDD 1805
            CGLVKN+AITGLVST +++PL DKLFDCGMEKLVDD  S    GK+KVF++GDWVGVC+D
Sbjct: 583  CGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDT-STKLSGKNKVFLDGDWVGVCED 641

Query: 1806 SLSFVTDLKHSRRSKRIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLVKGG 1985
             +SFV +L+  RR K +P QVEIK D + GEVRIFSDAGRILRPLL+VEN+KK+K  KG 
Sbjct: 642  PISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGD 701

Query: 1986 -YNFQSLLXXXXXXXXXXXXXXXCQTAWGIKYLFLGEKEQPPLYYTHCELDLSFLLGLSC 2162
             + FQSLL               C TAWGIKYL  G  + PP+ YTHCELD+SFLLGLSC
Sbjct: 702  DFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGH-DDPPVKYTHCELDMSFLLGLSC 760

Query: 2163 GIIPFANHDHARRVLYQSEKHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCL 2342
            GIIP+ANHDHARRVLYQSEKHSQQA+G+STTNPNIRVDTLS QLYYPQRPLFRTMISD  
Sbjct: 761  GIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISD-- 818

Query: 2343 GLPAFPQGQNGVLAKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSY 2522
                        L +PEYFNGQ AIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RSY
Sbjct: 819  ------------LPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 866

Query: 2523 KAEVDNMELFEAKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAE 2702
            K+EVDN E  + KR K +D V FGK QSKIGRVDSLDDDGFP+IGANLQ GDIVIGRCAE
Sbjct: 867  KSEVDNNESLDKKR-KSEDSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAE 925

Query: 2703 SGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGL 2882
            SG DHSIKLKHTE+G VQKVV++AND+G+NFAVVSLRQ+R+P LGDKFSSMHGQKGV+G 
Sbjct: 926  SGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGF 985

Query: 2883 LESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSI 3062
            LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKGIACGG +R+ATPF+T S+
Sbjct: 986  LESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSV 1045

Query: 3063 DEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVH 3242
            D I +QLHRAGFSRWG ERVYNG++GEM+RSLIFMGPTFYQRL HMAEDKVK+RNTGPVH
Sbjct: 1046 DAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVH 1105

Query: 3243 PLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANV 3422
            PLTRQPV+DRKRFGG+KFGEMERDCL+AHGA+ANLHERLFTLSD + MH+C +C NI+NV
Sbjct: 1106 PLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNV 1165

Query: 3423 IQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGI 3563
            IQRSV GG  K+RG YCR+C+S+E IVKV++PYGAKLLCQELFSMGI
Sbjct: 1166 IQRSVAGGR-KVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGI 1211


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score = 1613 bits (4176), Expect = 0.0
 Identities = 784/1158 (67%), Positives = 940/1158 (81%), Gaps = 1/1158 (0%)
 Frame = +3

Query: 93   LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 272
            L E +L  FCK  S  FFE+YGLI+HQI SYN F+ +GIQ++FDS+  I VEPG+DPSK+
Sbjct: 61   LGETYLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR 120

Query: 273  GEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 452
            G+G+WK+A+V FGKV L++P FW GEKFS D  KE YL L PRHARLQNMTYSAR+ V  
Sbjct: 121  GDGDWKHASVKFGKVTLERPKFWAGEKFSADGGKE-YLDLLPRHARLQNMTYSARIMVET 179

Query: 453  KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 632
             ++VYT+ L+++DKFK+G +  V K+   ED+RDV+IGRIPVMV S +CW+NG+DK DC+
Sbjct: 180  HVQVYTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCE 239

Query: 633  FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 812
            FD GGYF+VKGAEK FIAQEQLCL RLWV  +PTW+V YR      KR+RV I++ +  T
Sbjct: 240  FDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGE---KRKRVYIKLTE--T 294

Query: 813  GEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATIN 992
             + ++  GG+     ++  ++P+W++FFALG+SSD+E+V+ I+VDI D   VNIL+A+I+
Sbjct: 295  LKLEHIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIH 354

Query: 993  NAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMV 1172
             A+K C+ F K ++AL Y+D  IKN KFPP E +EE I  YLFP+L+G KQKA FLGYMV
Sbjct: 355  EADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMV 414

Query: 1173 KYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKDLYGDRPM 1352
            K L   + GRRK +NRDDFRNK               HI HA+R+M + MQ+DLYGDR +
Sbjct: 415  KCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQV 474

Query: 1353 KPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQ 1532
            +PI++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQM +D+RK+RQQ
Sbjct: 475  QPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQ 534

Query: 1533 VGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLNDKLFDCG 1712
            V Y GK GDAR+P+PSHWGKLCFLSTPDGE CGLVKN+A  GLVST +++P  + LF CG
Sbjct: 535  VTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCG 594

Query: 1713 MEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQVEIKWDRKH 1892
            M+KLVDD  + S  GK KV ++G+WVGVC+DS  FV+ L+  RR   +P QVE+K D   
Sbjct: 595  MQKLVDDC-ATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQ 653

Query: 1893 GEVRIFSDAGRILRPLLIVENIKKIKLVKGG-YNFQSLLXXXXXXXXXXXXXXXCQTAWG 2069
            GEVRIFSD+GRILRPLL+V N+KKIK +KGG Y FQSLL               C+TAWG
Sbjct: 654  GEVRIFSDSGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWG 713

Query: 2070 IKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGYS 2249
            ++Y+   +KE PP  YTHCELD+SFLLGLSCGIIPFANHDHARRVLYQSEKHSQQA+G+S
Sbjct: 714  VEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFS 773

Query: 2250 TTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAVN 2429
            T NPN RVDT + QLYYPQRPLFRTM++D LG P   Q Q G+L +PEYFNGQ AIVAVN
Sbjct: 774  TVNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVN 833

Query: 2430 VHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRVDFGKAQSK 2609
            VH GYNQEDSLVMNRASLERGMFR+EHVRSYKAEVDN E   AK+LK++D V+FGK QSK
Sbjct: 834  VHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAM-AKKLKIEDSVNFGKTQSK 892

Query: 2610 IGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQ 2789
            IGRVDSLDDDGFP+IGANLQ+GDI+IG+ AESG DHS+KLKHTE+G VQKV+L+ANDEG+
Sbjct: 893  IGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGK 952

Query: 2790 NFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQ 2969
            NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQ
Sbjct: 953  NFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQ 1012

Query: 2970 TPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMM 3149
            TPGQLLEAALGKGIA GG  +YATPF+T S+D I  QL   GF+RWG+ERVYNG++GEM+
Sbjct: 1013 TPGQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMV 1072

Query: 3150 RSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAH 3329
             SLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AH
Sbjct: 1073 HSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH 1132

Query: 3330 GASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKV 3509
            GA+ANLHERLFTLSD SQMH+C KC N+ANVIQR+VQGG  K+RG +CRFC+S E+IVKV
Sbjct: 1133 GAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGG--KVRGPFCRFCESVEDIVKV 1190

Query: 3510 SLPYGAKLLCQELFSMGI 3563
            ++PYGAKLLCQELFSMGI
Sbjct: 1191 NVPYGAKLLCQELFSMGI 1208


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score = 1612 bits (4175), Expect = 0.0
 Identities = 785/1158 (67%), Positives = 939/1158 (81%), Gaps = 1/1158 (0%)
 Frame = +3

Query: 93   LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 272
            L E FL  FCK  S  FFE+YGLI+HQI SYN F+ +GIQ++FDS+  I VEPG+DPSK+
Sbjct: 61   LGESFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR 120

Query: 273  GEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 452
            G+G+WK+A+V FGKV L++P FW GEKFS D  KE YL L PRHARLQNMTYSAR+ V  
Sbjct: 121  GDGDWKHASVKFGKVTLERPKFWAGEKFSVDGGKE-YLDLLPRHARLQNMTYSARIMVET 179

Query: 453  KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 632
             ++VYT+ L+++DKFK+G +  V K+   ED+RDV+IGRIPVMV S +CW+NG+DK DC+
Sbjct: 180  HVQVYTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCE 239

Query: 633  FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 812
            FD GGYF+VKGAEK FIAQEQLCL RLWV  +PTW+V YR      KR+RV I++ +  T
Sbjct: 240  FDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGE---KRKRVYIKLTE--T 294

Query: 813  GEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATIN 992
             + ++  GG+     ++  ++P+W++FFALG+SSD+E+V+ I+VDI D   VNIL+A+I+
Sbjct: 295  LKLEHIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIH 354

Query: 993  NAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMV 1172
             A+K C+ F K ++AL Y+D  IKN KFPP E +EE I  YLFP+L+G KQKA FLGYMV
Sbjct: 355  EADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMV 414

Query: 1173 KYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKDLYGDRPM 1352
            K L   + GRRK +NRDDFRNK               HI HA+R+M + MQ+DLYGDR +
Sbjct: 415  KCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQV 474

Query: 1353 KPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQ 1532
            +PI++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQM +D+RK+RQQ
Sbjct: 475  QPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQ 534

Query: 1533 VGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLNDKLFDCG 1712
            V Y GK GDAR+P+PSHWGKLCFLSTPDGE CGLVKN+A  GLVST +++P  + LF CG
Sbjct: 535  VTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCG 594

Query: 1713 MEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQVEIKWDRKH 1892
            M+KLVDD  S S  GK KV ++G+WVGVC+DS  FV+ L+  RR   +P QVE+K D   
Sbjct: 595  MQKLVDDC-STSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQ 653

Query: 1893 GEVRIFSDAGRILRPLLIVENIKKIKLVKGG-YNFQSLLXXXXXXXXXXXXXXXCQTAWG 2069
            GEVRIFSD GRILRPLL+V N+KKIK +KGG Y FQSLL               C+TAWG
Sbjct: 654  GEVRIFSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWG 713

Query: 2070 IKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGYS 2249
            ++Y+   +KE PP  YTHCELD+SFLLGLSCGIIPFANHDHARRVLYQSEKHSQQA+G+S
Sbjct: 714  VEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFS 773

Query: 2250 TTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAVN 2429
            T NPN RVDT + QLYYPQRPLFRTM++D LG P   Q Q G+L +PEYFNGQ AIVAVN
Sbjct: 774  TVNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVN 833

Query: 2430 VHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRVDFGKAQSK 2609
            VH GYNQEDSLVMNRASLERGMFR+EHVRSYKAEVDN E   AK+LK++D V+FGK QSK
Sbjct: 834  VHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAM-AKKLKIEDSVNFGKTQSK 892

Query: 2610 IGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQ 2789
            IGRVDSLDDDGFP+IGANLQ+GDI+IG+ +ESG DHS+KLKHTE+G VQKV+L+ANDEG+
Sbjct: 893  IGRVDSLDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGK 952

Query: 2790 NFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQ 2969
            NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQ
Sbjct: 953  NFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQ 1012

Query: 2970 TPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMM 3149
            TPGQLLEAALGKGIA GG  +YATPF+T S+D I  QL   GF+RWG+ERVYNG++GEM+
Sbjct: 1013 TPGQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMV 1072

Query: 3150 RSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAH 3329
             SLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AH
Sbjct: 1073 HSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH 1132

Query: 3330 GASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKV 3509
            GA+ANLHERLFTLSD SQMH+C KC N+ANVIQR+VQGG  K+RG +CRFC+S E+IVKV
Sbjct: 1133 GAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGG--KVRGPFCRFCESVEDIVKV 1190

Query: 3510 SLPYGAKLLCQELFSMGI 3563
            ++PYGAKLLCQELFSMGI
Sbjct: 1191 NVPYGAKLLCQELFSMGI 1208


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score = 1596 bits (4132), Expect = 0.0
 Identities = 777/1159 (67%), Positives = 939/1159 (81%), Gaps = 6/1159 (0%)
 Frame = +3

Query: 105  FLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGE 284
            FL  FCK  S  FFE+YG+I+HQI+SYN F+ +GIQ++FDS+  I VEPG+DPSKKGEGE
Sbjct: 63   FLRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGE 122

Query: 285  WKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEV 464
            WK+A+V FGKV LD+P FW GEKFS   N E+YL L+PRHARLQNMTYSAR+ V   ++V
Sbjct: 123  WKHASVKFGKVTLDRPKFWAGEKFSAY-NGEEYLDLWPRHARLQNMTYSARIIVETHVQV 181

Query: 465  YTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQG 644
            +T+ L+++DKFK+G E  V K+ + ED+RDV IGRIPVMV S +CW++G D+ DCDFD G
Sbjct: 182  FTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCDFDHG 241

Query: 645  GYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQ 824
            GYF+VKGAEK FIAQEQ+CL RLWV    TW+V YRS     KR RV +++ +  T + +
Sbjct: 242  GYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGE---KRNRVYLKLTE--TLKHE 296

Query: 825  YFHG-GKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAE 1001
            +  G  K L+++F++ ++P+W++FFALG+SSD+EIVD I+VDI D   +NIL+A+I++A+
Sbjct: 297  HIKGEAKALSVYFLA-EMPIWVLFFALGVSSDREIVDLIDVDIKDTNIINILVASIHDAD 355

Query: 1002 KACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYL 1181
            K C+ F K ++AL Y+D  IK+ KFPP E +EE I +YLFP+L+G KQKA FLGYMVK L
Sbjct: 356  KNCEDFRKGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCL 415

Query: 1182 FLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKDLYGDRPMKPI 1361
             L Y GRRK +NRDDFRNK               HI HA+R+M + +Q+DL GDR ++P+
Sbjct: 416  LLSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQPL 475

Query: 1362 DYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQVGY 1541
            ++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQM +DLRKTRQQV Y
Sbjct: 476  EHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTY 535

Query: 1542 VGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLNDKLFDCGMEK 1721
             GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A  GLVST +++PL + LF CGM+K
Sbjct: 536  TGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKPLLETLFRCGMQK 595

Query: 1722 LVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQVEIKWDRKHGEV 1901
            LVDD+ + S  GK KV ++GDWVGVC+DS  FV+ L+  RR   +P QVE+K D +  EV
Sbjct: 596  LVDDS-ATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEV 654

Query: 1902 RIFSDAGRILRPLLIVENIKKIKLVKGG-----YNFQSLLXXXXXXXXXXXXXXXCQTAW 2066
            RIFSDAGRI+RPLL+V N+K IK +K G     Y FQ+LL               C+TAW
Sbjct: 655  RIFSDAGRIMRPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAW 714

Query: 2067 GIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGY 2246
            G++YL   +KE PP+ YTHCELD+SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQA+G+
Sbjct: 715  GVEYLLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGF 774

Query: 2247 STTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAV 2426
            ST NPN RVDT + QLYYPQRPLF TM+SD LG P   + Q G+L++PEY+NGQ AIVAV
Sbjct: 775  STVNPNARVDTNTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIVAV 834

Query: 2427 NVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRVDFGKAQS 2606
            NVH GYNQEDS+VMNRASLERGMFR+EHVRSYKAEVDN E    K+ KV+D V+FGK QS
Sbjct: 835  NVHLGYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNKEAM-GKKSKVEDSVNFGKTQS 893

Query: 2607 KIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEG 2786
            KIGRVDSLDDDGFP+IGANLQ+GDI+IG+ AESG DHS+K+KHTE+G VQKV+L+AND+G
Sbjct: 894  KIGRVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDDG 953

Query: 2787 QNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTR 2966
            +NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+R
Sbjct: 954  KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSR 1013

Query: 2967 QTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEM 3146
            QTPGQLLEAALGKGIA GG  +YATPF+  S+D I  QLH  GFSRWGSERVYNG++GEM
Sbjct: 1014 QTPGQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGSERVYNGRTGEM 1073

Query: 3147 MRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA 3326
            + SLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+A
Sbjct: 1074 VHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 1133

Query: 3327 HGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVK 3506
            HGA+ANLHERLFTLSD SQMH+C KC N+ANVIQRS  GG  K+RG +CRFC+S E+IVK
Sbjct: 1134 HGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG--KIRGPFCRFCESVEDIVK 1191

Query: 3507 VSLPYGAKLLCQELFSMGI 3563
            V +PYGAKLLCQELFSMGI
Sbjct: 1192 VDVPYGAKLLCQELFSMGI 1210


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score = 1595 bits (4129), Expect = 0.0
 Identities = 786/1197 (65%), Positives = 949/1197 (79%), Gaps = 10/1197 (0%)
 Frame = +3

Query: 3    DVFSSFKTSN-GGSVSEKASTSTFTDQEPI-NLSEEFLNKFCKDISVSFFEEYGLINHQI 176
            D+  S K  N  G     +  + F D   + +L EEFL  FC+  +VSFF EYGL++HQI
Sbjct: 10   DIAMSSKGENISGQDDMDSDDNGFIDPTSLRDLGEEFLKTFCRKAAVSFFNEYGLVSHQI 69

Query: 177  ESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKF 356
             SYN+F+++G+QK FDS     VEPG+DPSKKGEGEW+YA++ FG+V LDKP F+ G   
Sbjct: 70   NSYNEFIKNGLQKAFDSFGETIVEPGYDPSKKGEGEWRYASMRFGQVTLDKPSFFAGNGG 129

Query: 357  SKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVI 536
             + D       +FPRHARLQNMTYS+RMKV V+ +VYTQ  + +DKFK+G+E  +QK+V+
Sbjct: 130  DEHD-------MFPRHARLQNMTYSSRMKVKVQFQVYTQKRVTSDKFKTGREQYIQKEVL 182

Query: 537  SEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLW 716
            S++  D++IGRIPVMVKS++CW+ G++K DCDFD GGYF++KGAEK F+AQEQ+CL RLW
Sbjct: 183  SDEATDIIIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQICLKRLW 242

Query: 717  VYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGG-KVLTMHFMSCKIPLWIVF 893
            V  S  W V Y+S+   NKR R+ + + D    ED    GG KVL+++F+S +IP+WI+F
Sbjct: 243  VSNSMGWTVAYKSE---NKRNRLIVRLVDMSKFED--IKGGEKVLSVYFLSTEIPIWILF 297

Query: 894  FALGMSSDKEIVDTIEVDISDARTVNILLATINNAEKACQAFSKEREALKYMDGQIKNTK 1073
            FALG+SSDKEIV+ I+    D   +NIL A+I++A+  C  F K R ALKY+D  IK T 
Sbjct: 298  FALGVSSDKEIVNLIDFTCEDCSILNILFASIHDADNKCDEFRKGRNALKYVDKLIKGTT 357

Query: 1074 FPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXX 1253
            FPP E  EE +  YLFP L+G KQKA FLGYMVK L   Y+GRRKC+NRDDFRNK     
Sbjct: 358  FPPGESTEECMNTYLFPSLHGTKQKARFLGYMVKCLLQAYSGRRKCDNRDDFRNKRLELA 417

Query: 1254 XXXXXXXXXXHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTH 1433
                      HI HA+++MA+ +Q+DLYGDR ++PI+YYLDASI+TNGLSRAFSTG W+H
Sbjct: 418  GELLERELKVHIAHARKRMAKALQRDLYGDRTVRPIEYYLDASILTNGLSRAFSTGAWSH 477

Query: 1434 PFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTP 1613
            PFK++E+I+G+VANL R NPLQ   DLR+TRQQV Y GK GDAR+P+PSHWGK+CFLSTP
Sbjct: 478  PFKRTERISGIVANLGRANPLQTLVDLRRTRQQVQYTGKVGDARYPHPSHWGKICFLSTP 537

Query: 1614 DGEKCGLVKNMAITGLVSTNLMEPLNDKLFDCGMEKLVDDAFSASWKGKDKVFVNGDWVG 1793
            DGE CGLVKN+ +TGLVST+++EP+ ++LF+ GMEKL DDA S S  GK KVFV+GDW+G
Sbjct: 538  DGENCGLVKNLGVTGLVSTSILEPIFEQLFNSGMEKLADDA-SYSLGGKFKVFVDGDWIG 596

Query: 1794 VCDDSLSFVTDLKHSRRSKRIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKL 1973
            VC DSLSFV++L+  RR K +P QVEIK D    EVRIF DAGRILRPLL+VEN+ KIK 
Sbjct: 597  VCKDSLSFVSELRRKRRRKELPTQVEIKRDELQSEVRIFMDAGRILRPLLVVENMGKIKS 656

Query: 1974 VKG-GYNFQSLLXXXXXXXXXXXXXXXCQTAWGIKYLFLGEKEQPPLYYTHCELDLSFLL 2150
            ++G  Y FQ+LL               C TAWGIKYL    +++ P+ +THCELD+SFLL
Sbjct: 657  LEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLL 716

Query: 2151 GLSCGIIPFANHDHARRVLYQSEKHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMI 2330
            GLSCGIIPFANHDHARRVLYQS+KHS QA+G+ TTNP+IRVDTLS QL+YPQRPLFRTMI
Sbjct: 717  GLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPLFRTMI 776

Query: 2331 SDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEH 2510
            SDCLG P +  G N +L +PE +NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFR+EH
Sbjct: 777  SDCLGKPGY--GHNHILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH 834

Query: 2511 VRSYKAEVDNMELFEAKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIG 2690
            +RSYKAEVDN E+ + KR    D V+FGK QSKIGRVDSLDDDGFP+IGANLQ GDIVIG
Sbjct: 835  IRSYKAEVDNKEM-QVKRRSSDDMVNFGKIQSKIGRVDSLDDDGFPFIGANLQCGDIVIG 893

Query: 2691 RCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKG 2870
            + A+SG DHSIKLKHTE+G VQKVVL++ND+G+NF+VVSLRQ+RSP LGDKFSSMHGQKG
Sbjct: 894  KYADSGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSMHGQKG 953

Query: 2871 VVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIA------CGGSVR 3032
            V+G LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKGIA      C G  R
Sbjct: 954  VLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAALGKGICSGLKR 1013

Query: 3033 YATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDK 3212
            YATPF TPS+D IT QLHRAGFS+WG+ER+Y+G++GEM+RSLIF+GPTFYQRL HM+EDK
Sbjct: 1014 YATPFATPSVDAITEQLHRAGFSKWGTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDK 1073

Query: 3213 VKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHV 3392
            VK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGA+ANLHERLFTLSD  QMH+
Sbjct: 1074 VKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHI 1133

Query: 3393 CNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGI 3563
            C KC N+ANVIQR V GG  K+RG YCR CDS ++IVK ++PYGAKLLCQELFSMGI
Sbjct: 1134 CRKCKNVANVIQR-VVGGGRKVRGPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 1189


>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1184

 Score = 1593 bits (4125), Expect = 0.0
 Identities = 777/1159 (67%), Positives = 933/1159 (80%), Gaps = 2/1159 (0%)
 Frame = +3

Query: 93   LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 272
            L EEFL  FCK  +VSFF+EYGLI+HQ+ SYN F+++G+Q  FDS     +  G+DPSKK
Sbjct: 32   LGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHSGYDPSKK 91

Query: 273  GEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 452
            GEG+W++A V FGKV +++P FW     ++       L + PRHARLQNMTYS+RMKV+V
Sbjct: 92   GEGDWRHARVRFGKVTVERPTFWAVSGGNE-------LNMLPRHARLQNMTYSSRMKVNV 144

Query: 453  KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 632
             L+VYT   +K+DKFK+G+E  V+++V+ +D RD++IGRIPVMV+S++CW+N ++K DCD
Sbjct: 145  DLQVYTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADCD 204

Query: 633  FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 812
            FD GGYF++KG EK FIAQEQ+ + RLW+  S  W + YRS+    KR R+ I + +   
Sbjct: 205  FDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEV---KRNRLIIRLVE--N 259

Query: 813  GEDQYFHGG-KVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATI 989
             + +Y  GG KVLT++F+S +IP+W++FFALG+SSDKE+V+ I+ + +D+   NIL A+I
Sbjct: 260  SKVEYIKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASI 319

Query: 990  NNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYM 1169
             NA+  C  F + R A+ Y+   +K+T+FPP E IEE +  YLFP L   KQKA FLGYM
Sbjct: 320  RNADGKCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYM 379

Query: 1170 VKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKDLYGDRP 1349
            VK L   YTGR KC+NRDDFRNK               HI HA+R+MA+ +Q+DLY DR 
Sbjct: 380  VKCLLQAYTGRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRT 439

Query: 1350 MKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQ 1529
            ++PI++YLDASI+TNGLSRAFSTG W+HP+K+ E+I+GVVANL R NPLQ   DLRKTRQ
Sbjct: 440  VRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQ 499

Query: 1530 QVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLNDKLFDC 1709
            QV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A TGLVSTN+ME + DKLFD 
Sbjct: 500  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMESIVDKLFDS 559

Query: 1710 GMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQVEIKWDRK 1889
            GME+LV+D  S S  GKDKVF+NG+WVGVC+DSLSF  +++  RRSK  P QVEIK D  
Sbjct: 560  GMEELVNDTCS-SLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEH 618

Query: 1890 HGEVRIFSDAGRILRPLLIVENIKKIKLVKG-GYNFQSLLXXXXXXXXXXXXXXXCQTAW 2066
             GEVRIFSD GRILRPLL+V+N+ +IK  KG  Y FQ+LL               C+TAW
Sbjct: 619  KGEVRIFSDGGRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAW 678

Query: 2067 GIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGY 2246
             IKYL    + + P+ YTHCELD+SFLLGLSCGIIPFANHDHARRVLYQ++KHSQQA+G+
Sbjct: 679  SIKYLLTDVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGF 738

Query: 2247 STTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAV 2426
            STTNPNIRVDTLS QLYYPQRPLFRTM SDCLG    P GQ GVL KPE +NGQNAIVAV
Sbjct: 739  STTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAV 798

Query: 2427 NVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRVDFGKAQS 2606
            NVH GYNQEDSLVMNR+SLERGMFR+EHVRSYKAEVDN E+ + KR K +D V+FGK QS
Sbjct: 799  NVHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEI-QDKRRKSEDIVNFGKIQS 857

Query: 2607 KIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEG 2786
            KIGRVDSLDDDGFPY+GANLQ GDIVIGRCAESG DHSIKLKHTE+G VQKVVL++ND+G
Sbjct: 858  KIGRVDSLDDDGFPYVGANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDG 917

Query: 2787 QNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTR 2966
            +N+AVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+R
Sbjct: 918  KNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSR 977

Query: 2967 QTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEM 3146
            QTPGQLLEAALGKGIACGGS++YATPF+T S+D IT QLHRAGFSRWG+ERVYNG++GEM
Sbjct: 978  QTPGQLLEAALGKGIACGGSMKYATPFSTISVDAITEQLHRAGFSRWGNERVYNGRTGEM 1037

Query: 3147 MRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA 3326
            +RSLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKR+GG+KFGEMERDCL+A
Sbjct: 1038 VRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIA 1097

Query: 3327 HGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVK 3506
            HGASANLHERL TLSD SQMHVC  C N+ANVI+R+V GG  K+RG YCR C S ++IV+
Sbjct: 1098 HGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGGR-KIRGPYCRGCQSVDDIVR 1156

Query: 3507 VSLPYGAKLLCQELFSMGI 3563
            V++PYGAKLLCQELFSMGI
Sbjct: 1157 VNVPYGAKLLCQELFSMGI 1175


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
            lycopersicum]
          Length = 1219

 Score = 1593 bits (4124), Expect = 0.0
 Identities = 777/1158 (67%), Positives = 932/1158 (80%), Gaps = 5/1158 (0%)
 Frame = +3

Query: 105  FLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGE 284
            FL  FCK  S  FFE+YGLI+HQI+SYN F+ +GIQK+FDS+  I VEPG+DPSKKGEGE
Sbjct: 63   FLRNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSKKGEGE 122

Query: 285  WKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEV 464
            WK+A+V FG V+LD+P FW GEK+S   N E+YL ++PRHARLQNMTYSAR+ V   ++V
Sbjct: 123  WKHASVKFGNVILDRPKFWAGEKYSAY-NGEEYLNMWPRHARLQNMTYSARIIVETHVQV 181

Query: 465  YTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQG 644
            +T+ L+++DKFK+G E  V K+ + ED+RDV IGRIPVMV S +CW++G D+ DC+FD G
Sbjct: 182  FTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRLDCEFDHG 241

Query: 645  GYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQ 824
            GYF+VKGAEK FIAQEQ+CL RLWV    TW+V YRS     KR RV +++ +    E Q
Sbjct: 242  GYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGE---KRNRVYLKLTETLKHE-Q 297

Query: 825  YFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAEK 1004
                 K L+++F++ ++P+W++FFALG+SSD+E+VD I+VDI D + +NIL+A+I++A+K
Sbjct: 298  IKGEAKSLSVYFLA-EMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHDADK 356

Query: 1005 ACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLF 1184
             C+ F K + AL Y+D  IK+ KFPP E +EE I +YLFP+L+G KQKA FLGYMVK L 
Sbjct: 357  NCEDFRKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLL 416

Query: 1185 LCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKDLYGDRPMKPID 1364
            L Y GRRK +NRDDFRNK               HI HA+R+M + +Q+DL GDR + PI+
Sbjct: 417  LSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIE 476

Query: 1365 YYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQVGYV 1544
            +YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQM +DLRKTRQQV Y 
Sbjct: 477  HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYT 536

Query: 1545 GKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLNDKLFDCGMEKL 1724
            GK GDAR+PNPSHWGK+CFLSTPDGE CGLVKN+A  GLVST ++ PL + LF CGM+KL
Sbjct: 537  GKVGDARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMPLLETLFRCGMQKL 596

Query: 1725 VDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQVEIKWDRKHGEVR 1904
            VDD  + S  GK KV ++GDWVGVC+DS  FV+ L+  RR   +P QVE+K D +  EVR
Sbjct: 597  VDDC-ATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVR 655

Query: 1905 IFSDAGRILRPLLIVENIKKIKLVKGG-----YNFQSLLXXXXXXXXXXXXXXXCQTAWG 2069
            IFSDAGRI+RPLL+V N+K IK + GG     Y FQ+LL               C+TAWG
Sbjct: 656  IFSDAGRIMRPLLVVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWG 715

Query: 2070 IKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGYS 2249
            ++YL   +KE PP+ YTHCELD+SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQA+G+S
Sbjct: 716  VEYLLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFS 775

Query: 2250 TTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAVN 2429
            T NPNIRVDT + QLYYPQRPLF TM+SD LG P   + Q G+L++PEY+NGQ AIVAVN
Sbjct: 776  TVNPNIRVDTNTHQLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAVN 835

Query: 2430 VHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRVDFGKAQSK 2609
            VH GYNQEDS+VMNRASLERGMFR+EHVRSYKAEVDNME    K+ K +D V+FGK QSK
Sbjct: 836  VHLGYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNMEA-TGKKSKAEDSVNFGKTQSK 894

Query: 2610 IGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQ 2789
            IGRVD LDDDG PYIGANLQ+GDI+IG+ AESG DHS+K+KHTEKG VQKV+L+ANDEG+
Sbjct: 895  IGRVDCLDDDGLPYIGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGK 954

Query: 2790 NFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQ 2969
            NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQ
Sbjct: 955  NFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQ 1014

Query: 2970 TPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMM 3149
            TPGQLLEAALGKGIA GG  +YATPF+  S+D I  QLH  GFSRWG+ERVYNG++GEM+
Sbjct: 1015 TPGQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGNERVYNGRTGEMV 1074

Query: 3150 RSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAH 3329
             SLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AH
Sbjct: 1075 HSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH 1134

Query: 3330 GASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKV 3509
            GA+ANLHERLFTLSD SQMH+C KC N+ANVIQR V GG  K+RG +CRFC+S E+IVKV
Sbjct: 1135 GAAANLHERLFTLSDSSQMHICGKCKNMANVIQRPVPGG--KVRGPFCRFCESVEDIVKV 1192

Query: 3510 SLPYGAKLLCQELFSMGI 3563
             +PYGAKLLCQELFSMGI
Sbjct: 1193 GVPYGAKLLCQELFSMGI 1210


>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
            gi|462422378|gb|EMJ26641.1| hypothetical protein
            PRUPE_ppa000410mg [Prunus persica]
          Length = 1200

 Score = 1570 bits (4065), Expect = 0.0
 Identities = 774/1164 (66%), Positives = 930/1164 (79%), Gaps = 6/1164 (0%)
 Frame = +3

Query: 90   NLSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSK 269
            +L E FL  FCK+ +++FF EYGLI+HQI SYN F+++GIQ++FDS   I VEPG+DPSK
Sbjct: 45   DLGEGFLKFFCKEAAIAFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDPSK 104

Query: 270  KGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVS 449
            KGE EW+YA+V FGKV L  P FW G     DD KE   K+ PRHARLQNM+Y+++MKV+
Sbjct: 105  KGESEWRYASVKFGKVTLGMPSFWGGS----DDEKE--YKMLPRHARLQNMSYASKMKVN 158

Query: 450  VKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDC 629
            + +EVYTQ L+ +DKFK+GK   + KQ++S D RD++IG +PVMVKS++CW+   +K DC
Sbjct: 159  ITVEVYTQKLVSSDKFKTGKSQYLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDC 218

Query: 630  DFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAP 809
            DFD GGYF++KGAEK FIAQEQ CL RL +  +    V YRS+    KR R+ I +    
Sbjct: 219  DFDHGGYFIIKGAEKTFIAQEQSCLKRLLITNNQGLTVAYRSEV---KRHRLIIRLVGIS 275

Query: 810  TGEDQYFHG-GKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLAT 986
              E+    G  KVLT++FMS +IP+WI FFALG+SSD+E+++ I+ D  DA   NIL A+
Sbjct: 276  KLEN--IEGVEKVLTVYFMSTEIPVWIWFFALGVSSDREVMNLIDYDSEDASISNILFAS 333

Query: 987  INNAEKACQ----AFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAV 1154
            I +A+K        F + + ALKY+D  I+ T FPP E +EE I  YLFP+L G KQKA 
Sbjct: 334  IRDADKLNDKVDGGFRRGKNALKYVDEVIRKTAFPPGESMEECISLYLFPNLKGLKQKAR 393

Query: 1155 FLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKDL 1334
            FLGYMVK L   Y GRRKC+NRDDFRNK               HI HA+R+MA+ +Q+DL
Sbjct: 394  FLGYMVKSLLQAYAGRRKCDNRDDFRNKRLDLAGELLERELKAHIGHARRRMAKALQRDL 453

Query: 1335 YGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDL 1514
            YGDR ++PI++YLDASI+TNG+SRAFSTG W HPFK+ E+++GVVA + R NPLQ   D+
Sbjct: 454  YGDRAVRPIEHYLDASIVTNGISRAFSTGAWCHPFKRMERMSGVVATVGRANPLQTMVDM 513

Query: 1515 RKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLND 1694
            RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A TGLVSTN++E L  
Sbjct: 514  RKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNVLESLIP 573

Query: 1695 KLFDCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQVEI 1874
            +L  CGMEKLVDD F+ S +GKDKVF+NGDWVGVC+DSLSFV +L+  RR K++P QVEI
Sbjct: 574  QLLTCGMEKLVDDTFT-SLRGKDKVFLNGDWVGVCEDSLSFVLELRRMRRRKKLPHQVEI 632

Query: 1875 KWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLVKGGYN-FQSLLXXXXXXXXXXXXXXX 2051
            K D   GEVRIFSDAGRILRPLL+VEN+ K+K  KGG + FQ  L               
Sbjct: 633  KRDVHQGEVRIFSDAGRILRPLLVVENLNKVKASKGGKSSFQYFLDNGIIELIGAEEEED 692

Query: 2052 CQTAWGIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQ 2231
            C TAWGIKYLF+ +K +    +THCELD+SFLLGLSCGIIP+ANHDHARRVLYQ++KHSQ
Sbjct: 693  CSTAWGIKYLFMEDKGKSATKFTHCELDMSFLLGLSCGIIPYANHDHARRVLYQAQKHSQ 752

Query: 2232 QALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQN 2411
            QA+G+STTNPN+RVDTLS QL+YPQRPLF+TM SDCLG P      N ++ KPEY+NGQN
Sbjct: 753  QAIGFSTTNPNLRVDTLSHQLHYPQRPLFQTMTSDCLGKPG---RHNRIVPKPEYYNGQN 809

Query: 2412 AIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRVDF 2591
            AIVAVNVH G+NQEDS+VMNRASLERGMFR+EH+RSYKAEVDN E  + KR K  D V+F
Sbjct: 810  AIVAVNVHLGFNQEDSIVMNRASLERGMFRSEHIRSYKAEVDNKESLD-KRRKPDDCVNF 868

Query: 2592 GKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLT 2771
            GK QSK GRVDSLDDDGFPY+GANLQ+GDI+IGRC+ESG DHSIKLKHTE+G VQKV+L+
Sbjct: 869  GKMQSKFGRVDSLDDDGFPYVGANLQSGDIIIGRCSESGADHSIKLKHTERGMVQKVLLS 928

Query: 2772 ANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPH 2951
            +ND+G+NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QG+VPDIVINPH
Sbjct: 929  SNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPH 988

Query: 2952 AFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNG 3131
            AFP+RQTPGQLLEAALGKGIACGGS RYATPF+T S+D+IT+QLH AGFSRWG+ERVYNG
Sbjct: 989  AFPSRQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHSAGFSRWGNERVYNG 1048

Query: 3132 QSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMER 3311
             +G M+RSLIFMGPTFYQRL HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMER
Sbjct: 1049 ATGAMVRSLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER 1108

Query: 3312 DCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSA 3491
            DCL+AHGASANLHERLFTLSD SQMHVC KC N+A VI R+V GG  K+RG +CR CDSA
Sbjct: 1109 DCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVAYVILRTVAGGR-KIRGPHCRICDSA 1167

Query: 3492 ENIVKVSLPYGAKLLCQELFSMGI 3563
            +++V+V++PYGAKLLCQELFSMGI
Sbjct: 1168 DDLVRVNVPYGAKLLCQELFSMGI 1191


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score = 1569 bits (4062), Expect = 0.0
 Identities = 776/1188 (65%), Positives = 934/1188 (78%), Gaps = 1/1188 (0%)
 Frame = +3

Query: 3    DVFSSFKTSNGGSVSEKASTSTFTDQEPINLSEEFLNKFCKDISVSFFEEYGLINHQIES 182
            D+   F + +G       S+++ TD     + E  L  FC   +  FF EYGLI+HQI S
Sbjct: 29   DMDIDFDSDSGSDCDFMDSSTSLTD-----IGEAKLKDFCNKAATLFFNEYGLISHQINS 83

Query: 183  YNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSK 362
            YN F+ +GIQK FDS   + VEPG+DPSKKGE EW+YA+V FGKV L+KP FW+G     
Sbjct: 84   YNDFINNGIQKAFDSFGELVVEPGYDPSKKGENEWRYASVKFGKVALEKPTFWSGA---- 139

Query: 363  DDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISE 542
            D++K     + PRHARLQNMTYS++MKV+V +EVYT+ ++++DKFK+GK+  V K+V++ 
Sbjct: 140  DEHK-----MLPRHARLQNMTYSSKMKVNVSVEVYTRKVVRSDKFKTGKDQYVDKEVLNT 194

Query: 543  DERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVY 722
            D R++ IG +PVMVKS++CW+   +K DCDFD GGYF++KGAEK FIAQEQ+CL RLW+ 
Sbjct: 195  DNRNITIGSLPVMVKSDLCWMKTAEKGDCDFDHGGYFLIKGAEKVFIAQEQICLKRLWIS 254

Query: 723  QSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFAL 902
                W V Y+S+    KR R+ + +      ED      K LT++F+S +IPLWI+FFAL
Sbjct: 255  NIQGWTVSYKSEI---KRNRLIVRLVGLSALEDVKAEK-KCLTVYFLSTEIPLWILFFAL 310

Query: 903  GMSSDKEIVDTIEVDISDARTVNILLATINNAEKACQAFSKEREALKYMDGQIKNTKFPP 1082
            G++SDKE++D I    +DAR VNI  A+I++A++  + F + +EAL+Y+  QI+ T+FPP
Sbjct: 311  GVTSDKEVIDLIGYGSNDARIVNIFFASIHDADEKTEGFRRGKEALEYVVRQIRGTRFPP 370

Query: 1083 VEEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXX 1262
             E  E+    YLFP L+  +QKA FLGYMVK L   Y G+RKC N D FRNK        
Sbjct: 371  GEN-EDFFLLYLFPTLHSLRQKARFLGYMVKCLLQAYNGQRKCNNWDSFRNKRFELAKEL 429

Query: 1263 XXXXXXXHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFK 1442
                   HI HA+R+MA+ +QKDLYGDR ++PI++YLDASI+TNGLSRAFSTG W+HP+K
Sbjct: 430  LERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDASIVTNGLSRAFSTGAWSHPYK 489

Query: 1443 KSEKIAGVVANLRRLNPLQMASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGE 1622
            + E+I+GVVANL R NPLQ   DLRKTR  V Y GK GDARFP+PSHWG++CFLSTPDGE
Sbjct: 490  RMERISGVVANLGRANPLQTMVDLRKTRYHVQYTGKVGDARFPHPSHWGRVCFLSTPDGE 549

Query: 1623 KCGLVKNMAITGLVSTNLMEPLNDKLFDCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCD 1802
             CGLVKN+A TGLVS N++EPL DKL   GMEK+ +D+ S     KDKVF+NG+WVGVC+
Sbjct: 550  NCGLVKNLATTGLVSVNILEPLIDKLIARGMEKVPEDSHS-DLDEKDKVFLNGEWVGVCE 608

Query: 1803 DSLSFVTDLKHSRRSKRIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLVKG 1982
            DS  FV +L+  RR K++P QVEIK D +  EVRIFSDAGRILRPLL+V+N+ KI+  KG
Sbjct: 609  DSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEVRIFSDAGRILRPLLVVQNLHKIEAFKG 668

Query: 1983 GY-NFQSLLXXXXXXXXXXXXXXXCQTAWGIKYLFLGEKEQPPLYYTHCELDLSFLLGLS 2159
            G   FQSLL               C TAWGIK+L  G   +  L YTHCELD+SFLLGLS
Sbjct: 669  GNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSLKYTHCELDMSFLLGLS 728

Query: 2160 CGIIPFANHDHARRVLYQSEKHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDC 2339
            CGIIPFANHDHARRVLYQ++KHSQQA+G+ TTNPNIRVDTLS QLYYPQRPLFRT+ SDC
Sbjct: 729  CGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLYYPQRPLFRTVTSDC 788

Query: 2340 LGLPAFPQGQNGVLAKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRS 2519
            LG P   +G NG++ KPE +NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RS
Sbjct: 789  LGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRS 848

Query: 2520 YKAEVDNMELFEAKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCA 2699
            YKA+VDN EL + KR K  D V+FGK  SKIGRVDSLDDDGFP+IGANLQ+GDIVIGRCA
Sbjct: 849  YKADVDNKELLD-KRRKYDDNVNFGKIPSKIGRVDSLDDDGFPFIGANLQSGDIVIGRCA 907

Query: 2700 ESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVG 2879
            ESG DHSIKLKHTE+G VQKVVL++NDEG+NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G
Sbjct: 908  ESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLG 967

Query: 2880 LLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPS 3059
             LESQENFPFT QGIVPDIVINPH+FP+RQTPGQLLEAALGKGIACGGS++YATPF+T S
Sbjct: 968  FLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAALGKGIACGGSMKYATPFSTLS 1027

Query: 3060 IDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPV 3239
            ++ ITNQLHRAGFSRWG+ERVYNG++GEM+RSLIFMGPTFYQRL HMAEDKVK+RNTGPV
Sbjct: 1028 VEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKVKFRNTGPV 1087

Query: 3240 HPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIAN 3419
            HPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSD SQMH+C KC N+AN
Sbjct: 1088 HPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVAN 1147

Query: 3420 VIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGI 3563
            VIQR+V GG  K+RG YCR C+S + IVKV++PYGAKLLCQELFSMGI
Sbjct: 1148 VIQRAVPGGR-KIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGI 1194


>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
            vesca subsp. vesca]
          Length = 1201

 Score = 1566 bits (4056), Expect = 0.0
 Identities = 771/1160 (66%), Positives = 925/1160 (79%), Gaps = 2/1160 (0%)
 Frame = +3

Query: 90   NLSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSK 269
            +L E FL++FCK+ SVSFF+EYGL++HQI SYN FVE+GIQ++FDS   I VEP FDPSK
Sbjct: 48   DLGEVFLDEFCKEASVSFFKEYGLLSHQINSYNDFVENGIQRVFDSFGEIVVEPNFDPSK 107

Query: 270  KGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVS 449
            KG  +W++A + FGKV L KP FW G    K+ N      + PRHARLQNMTYSARM V+
Sbjct: 108  KGNADWRFAAIKFGKVTLSKPCFWGGSDSDKEYN------MLPRHARLQNMTYSARMSVN 161

Query: 450  VKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDC 629
            + ++VYTQNL+++DKFK+G E  ++K  +S D RD++IGRIPVMVKSN+CW+ G++K DC
Sbjct: 162  ITVQVYTQNLVESDKFKTGTEQLLEKTTLSTDSRDIIIGRIPVMVKSNLCWMKGVEKGDC 221

Query: 630  DFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAP 809
            +FDQGGYF++ GAEK FIAQEQ CL RL +  S    V YRS+    KR R+ I +    
Sbjct: 222  EFDQGGYFIINGAEKTFIAQEQSCLKRLLITNSQGLTVAYRSEV---KRHRLIIRLSGIS 278

Query: 810  TGEDQYFHG-GKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLAT 986
              E+    G  KVL+++FMS +IP+WI FFALG+SSDKE++D I+  I DA   NIL A+
Sbjct: 279  KLEN--VEGVEKVLSVYFMSTEIPVWIWFFALGVSSDKEVIDLIDYGIEDASISNILFAS 336

Query: 987  INNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGY 1166
            I +A++    F +   AL+Y++  IK+T FPP E +E+ I  YLFP++ G KQKA FLGY
Sbjct: 337  IRDADERKDDFRRGNNALRYVENAIKSTTFPPGESVEDCISMYLFPNMRGLKQKARFLGY 396

Query: 1167 MVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKDLYGDR 1346
            MVK L     G RKC+NRDDFRNK               H++HA+RKMA+ +Q+DL GD 
Sbjct: 397  MVKCLLQTSIGLRKCDNRDDFRNKRLELAGELLERELKAHVSHARRKMAKALQRDLGGDH 456

Query: 1347 PMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTR 1526
             ++P+++YLDASI+TNG+SRAFSTG W HPFK+ E+I+GVVAN+ R NPLQ   D+RKTR
Sbjct: 457  VVRPVEHYLDASIVTNGVSRAFSTGAWCHPFKRMERISGVVANIGRANPLQTMIDMRKTR 516

Query: 1527 QQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLNDKLFD 1706
            QQV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A T LVS N+ EP+  KLF 
Sbjct: 517  QQVQYTGKAGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALVSINISEPILPKLFK 576

Query: 1707 CGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQVEIKWDR 1886
            CG+E+LVDD ++ S  GK KVF+NGDWVG+C DS  FVT L+  RRSK++P QVEIK D 
Sbjct: 577  CGIEELVDDTYT-SLAGKHKVFLNGDWVGICVDSHGFVTKLRRLRRSKKLPHQVEIKRDE 635

Query: 1887 KHGEVRIFSDAGRILRPLLIVENIKKIKLVKGG-YNFQSLLXXXXXXXXXXXXXXXCQTA 2063
              GEVRIFSDAGRILRPLL+V+ +KKIK  KG  + FQ  L               C+TA
Sbjct: 636  HKGEVRIFSDAGRILRPLLVVQGLKKIKAAKGEKHTFQDFLDKGIIEFIGAEEEEDCRTA 695

Query: 2064 WGIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALG 2243
            W IKYLF+ E++   + YTHCELD+SFLLGLSCGIIPFANHDHARRVLYQS+KHSQQA+G
Sbjct: 696  WAIKYLFM-EEQGSVVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIG 754

Query: 2244 YSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVA 2423
            YSTTNPN+RVDTLS  L+YPQRPLFRTMI+D LG P +P G NG + KPEYFNGQNAIVA
Sbjct: 755  YSTTNPNLRVDTLSHNLHYPQRPLFRTMIADSLGKPGYPVGHNGFMPKPEYFNGQNAIVA 814

Query: 2424 VNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRVDFGKAQ 2603
            VNVH GYNQEDS+VMNRASLERGMFR+EH+RSYKAEV+N    E KR K  + V+FGK Q
Sbjct: 815  VNVHLGYNQEDSIVMNRASLERGMFRSEHIRSYKAEVENKLSLE-KRRKPDECVNFGKIQ 873

Query: 2604 SKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDE 2783
            SK GRVD+LDDDGFP +GA+LQ+GDI+IGRC+ESGTDHSIKLKHTE+G VQKVVL++ND 
Sbjct: 874  SKFGRVDNLDDDGFPCVGASLQSGDIIIGRCSESGTDHSIKLKHTERGMVQKVVLSSNDA 933

Query: 2784 GQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPT 2963
            G+NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LE QENFPFT QGIVPDIVINPHAFP+
Sbjct: 934  GKNFAVVSLRQVRSPSLGDKFSSMHGQKGVLGFLEYQENFPFTIQGIVPDIVINPHAFPS 993

Query: 2964 RQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGE 3143
            RQTPGQLLEAALGKGIACGGS RYATPF+T S+D+IT+QLHRAGFSRWG+ERVYNG++GE
Sbjct: 994  RQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHRAGFSRWGNERVYNGRTGE 1053

Query: 3144 MMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLL 3323
            M+R LIFMGPTFYQRL HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+
Sbjct: 1054 MVRQLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI 1113

Query: 3324 AHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIV 3503
            AHGASANLHERLFTLSD S M+VC KC N ANVI+R + GG  K+RG YCR CDSA++IV
Sbjct: 1114 AHGASANLHERLFTLSDSSLMNVCQKCQNAANVIERKLTGGR-KIRGPYCRVCDSADDIV 1172

Query: 3504 KVSLPYGAKLLCQELFSMGI 3563
            +V++PYGAKLLCQELFSMGI
Sbjct: 1173 RVNVPYGAKLLCQELFSMGI 1192


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score = 1561 bits (4041), Expect = 0.0
 Identities = 767/1159 (66%), Positives = 918/1159 (79%), Gaps = 2/1159 (0%)
 Frame = +3

Query: 93   LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 272
            L +E L  FCK  +  FF+EYGLI+HQI SYN F+  G+Q++FDS   + VEPG+D SK+
Sbjct: 39   LGKETLQSFCKKAASLFFDEYGLISHQINSYNAFINSGLQRVFDSFGEVAVEPGYDSSKQ 98

Query: 273  GEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 452
             +GEW+ A+V FGKV LD+P FW G     + N      +FPRHARLQNMTYSARMK+ V
Sbjct: 99   KDGEWRRASVRFGKVTLDRPSFWGGTSSDAEHN------MFPRHARLQNMTYSARMKIHV 152

Query: 453  KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 632
             ++VYTQ + ++DKFK+G +  VQK V+  + R+++IGRIPVMVKS++CWL  ++K DCD
Sbjct: 153  NVQVYTQTVGRSDKFKTGIDKVVQKNVVHTENREIIIGRIPVMVKSDLCWLTTVEKGDCD 212

Query: 633  FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 812
            FD GGYF++KGAEK FIAQEQ+C+ RLW+  S  W V Y+S+    KR R+ + + +   
Sbjct: 213  FDHGGYFLIKGAEKVFIAQEQICMKRLWISNSQGWTVSYKSEV---KRNRLIVRLVELSK 269

Query: 813  GEDQYFHGGKV-LTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATI 989
             E  Y  G K  L ++F+S +IPLWI+FFALG+ SDKE++D I+   +DA  VNI  A+I
Sbjct: 270  LE--YIKGEKKGLCVYFLSTEIPLWILFFALGVRSDKEVIDLIDYASNDASIVNIFFASI 327

Query: 990  NNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYM 1169
            ++A++ C+ F +E  AL Y+D  +K T+FPP E IE+ I  YLFP LN  + KA FLGYM
Sbjct: 328  HDADEKCEHFRREDRALDYVDKLLKKTRFPPKESIEDAISAYLFPRLNSRRHKARFLGYM 387

Query: 1170 VKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKDLYGDRP 1349
            VK L   YTG RKC+NRD FRNK               H++HA R+M + +Q+DLYGDR 
Sbjct: 388  VKCLLEAYTGHRKCDNRDSFRNKRFELASELLERELKVHVSHALRRMTKALQRDLYGDRD 447

Query: 1350 MKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQ 1529
            + PI++YLDASI+TNGL+RAFSTG W HPFK  E+++GVV NL R NPLQ   DLRKTRQ
Sbjct: 448  VHPIEHYLDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQ 507

Query: 1530 QVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLNDKLFDC 1709
            QV Y GK GDAR+P+PSHWG++CFLSTPDGE CGLVKN+A+TG+VSTN+ E L DKLFD 
Sbjct: 508  QVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISESLVDKLFDS 567

Query: 1710 GMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQVEIKWDRK 1889
            GMEKLVDD ++    GK KVF+NG+WVGVC+DS  FV +L+  RR + +P QVEIK D +
Sbjct: 568  GMEKLVDDTYT-KLDGKHKVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQ 626

Query: 1890 HGEVRIFSDAGRILRPLLIVENIKKIKLVKGG-YNFQSLLXXXXXXXXXXXXXXXCQTAW 2066
              EVRIFSDAGRILRPLL+VEN+ KIK  KGG Y F SLL               C TAW
Sbjct: 627  QREVRIFSDAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAW 686

Query: 2067 GIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGY 2246
            GIK+L    + + P+ Y+HCELD+SFLLGLSCGIIPFANHDHARRVLYQ++KHSQQA+G+
Sbjct: 687  GIKFLLADIEGKQPMKYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGF 746

Query: 2247 STTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAV 2426
            STTNPNIRVDTLS QL+YPQRPLFRTMISDCL LP           KPE FNGQNAIVAV
Sbjct: 747  STTNPNIRVDTLSHQLHYPQRPLFRTMISDCLVLP-----------KPELFNGQNAIVAV 795

Query: 2427 NVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRVDFGKAQS 2606
            NVH GYNQEDSLVMNRASLERGMFR+EH+RSYKAEVDN EL + KR K +D + FGK QS
Sbjct: 796  NVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTD-KRRKSEDSITFGKIQS 854

Query: 2607 KIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEG 2786
            KIGRVDSLDDDGFP+IGAN+Q+GDIVIG+CAESG DHS+KLKHTE+G VQKVVL++NDEG
Sbjct: 855  KIGRVDSLDDDGFPFIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEG 914

Query: 2787 QNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTR 2966
            +NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QG+VPDIVINPHAFP+R
Sbjct: 915  KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSR 974

Query: 2967 QTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEM 3146
            QTPGQLLEAALGKGIACGGS RYATPF+T S+D+I +QLHRA FSRWG+ERVYNG++GEM
Sbjct: 975  QTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEM 1034

Query: 3147 MRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA 3326
            +RSLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+A
Sbjct: 1035 VRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 1094

Query: 3327 HGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVK 3506
            HGASANLHERLFTLSD S+MH+C KC N+ANVIQR V GG  K+RG YCR C+S +++VK
Sbjct: 1095 HGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGR-KIRGPYCRVCESVDDLVK 1153

Query: 3507 VSLPYGAKLLCQELFSMGI 3563
            VS+PYGAKLLCQELFSMGI
Sbjct: 1154 VSVPYGAKLLCQELFSMGI 1172


>gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus guttatus]
          Length = 1211

 Score = 1559 bits (4037), Expect = 0.0
 Identities = 761/1160 (65%), Positives = 917/1160 (79%), Gaps = 3/1160 (0%)
 Frame = +3

Query: 93   LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 272
            LSE FL   C+  S +FF++YGLI+HQI SYN FV HGIQK+FDSI  I VEPG+DPSKK
Sbjct: 50   LSEGFLKVSCRKASTAFFDQYGLISHQINSYNDFVNHGIQKVFDSIGEIVVEPGYDPSKK 109

Query: 273  GEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 452
            GEG+WK A + FGKV L++P FWTGEKFS  D  + YL+L PRHARLQNMTY+A++KV  
Sbjct: 110  GEGDWKRACLKFGKVTLERPTFWTGEKFSSVDGAKDYLELLPRHARLQNMTYAAKIKVET 169

Query: 453  KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 632
             L+VYT+ L ++DKF +G E++V+K +++E   +V  GR+PVMVKS++CW+  LDK DC+
Sbjct: 170  HLQVYTKGLNRSDKFTTGVENTVEKTLLNEYHNEVNFGRLPVMVKSDLCWMKSLDKKDCE 229

Query: 633  FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 812
            FDQGGYFV+KGAEK FIAQEQLCL RLWV + P+W V YR    V +R RV I++   P 
Sbjct: 230  FDQGGYFVIKGAEKTFIAQEQLCLKRLWVTKIPSWTVSYRP---VARRNRVYIKL--VPK 284

Query: 813  GEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATIN 992
             E       K+LT++F   +I +W++FFALG+ +DKE+V  I++DI D+   NIL+A+I 
Sbjct: 285  ME-HVIGADKILTVYFYVTEISVWVLFFALGIPNDKEVVKLIDLDIEDSDIANILIASIY 343

Query: 993  NAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMV 1172
            +A+K  + F KE  + K++   ++N KFPP E IE++I  YLFPHL  P QKA FLGYMV
Sbjct: 344  DADKKYEGFRKEGNSSKHIKELMQNCKFPPTESIEDLIKNYLFPHLKTPIQKACFLGYMV 403

Query: 1173 KYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKDLYGDRPM 1352
            K L   Y GRRK ENRDDFRNK               HI HA+R+M + MQ+DLY DR +
Sbjct: 404  KCLLEAYKGRRKVENRDDFRNKRLELAGELLERELRVHIKHAERRMTKAMQRDLYRDREV 463

Query: 1353 KPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQ 1532
            + ID YLDASI+TNGLSRAFSTG W HPFK+ E+ +GVVA +RR NPLQ  +D+RKTRQQ
Sbjct: 464  QSIDQYLDASIVTNGLSRAFSTGAWCHPFKRMERTSGVVATIRRTNPLQAIADMRKTRQQ 523

Query: 1533 VGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLN--DKLFD 1706
            V Y G+ GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A  GLVSTNL+   N   K   
Sbjct: 524  VSYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSTNLLAQGNLLKKFQQ 583

Query: 1707 CGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQVEIKWDR 1886
            CGMEK+VDD  S    GK KVF++GDW+G+C DS SFV+ L+  RR   IP Q+EIK D+
Sbjct: 584  CGMEKMVDDT-SNLLGGKHKVFLDGDWIGICKDSSSFVSKLRRKRRRMEIPHQMEIKRDQ 642

Query: 1887 KHGEVRIFSDAGRILRPLLIVENIKKIKLVKGGYNFQSLLXXXXXXXXXXXXXXXCQTAW 2066
             +GEVRIF+D+GRILRPLL+V+N+KKIK +KG ++FQSLL               CQTAW
Sbjct: 643  HNGEVRIFNDSGRILRPLLVVQNLKKIKDLKGNFSFQSLLDNGIIELIGAEEEEDCQTAW 702

Query: 2067 GIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGY 2246
            G++YLF  E E PP+ YTHCELD SFLLGLSCGI+PF NHDHARRVLYQSEKHSQQA+GY
Sbjct: 703  GVRYLFTAELENPPVKYTHCELDSSFLLGLSCGIVPFTNHDHARRVLYQSEKHSQQAIGY 762

Query: 2247 STTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAV 2426
            STTN  IRVDT S  LYYPQRPLFRT++SD LG   F     G++ +PE++NGQ AIVA+
Sbjct: 763  STTNSIIRVDTNSHSLYYPQRPLFRTVLSDSLGRSTFSDHYKGMIPRPEFYNGQCAIVAI 822

Query: 2427 NVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRVDFGKAQS 2606
            NVH GYNQEDSLVMNR+SLERGMFRTEHVRS+KA+V+N E    K++K+ + V FGK QS
Sbjct: 823  NVHLGYNQEDSLVMNRSSLERGMFRTEHVRSFKADVENSEAVGGKKVKMDEMVSFGKMQS 882

Query: 2607 KIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEG 2786
            KIGRVDSL+DDGFPYIGANLQTGDIVIG+ A +G DHSIKLKHTEKG V KVVL+ANDEG
Sbjct: 883  KIGRVDSLEDDGFPYIGANLQTGDIVIGKHAATGVDHSIKLKHTEKGMVHKVVLSANDEG 942

Query: 2787 QNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTR 2966
            +NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPF+ QGIVPDIVINPHAFP+R
Sbjct: 943  KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFSQQGIVPDIVINPHAFPSR 1002

Query: 2967 QTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEM 3146
            QTPGQLLEAALGKGIA GG ++YATPF++PS+++IT QLHR GFSRWG ERVY+G++GE 
Sbjct: 1003 QTPGQLLEAALGKGIALGGGLKYATPFSSPSVEDITAQLHRLGFSRWGGERVYDGRTGEK 1062

Query: 3147 MRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA 3326
            + SLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+A
Sbjct: 1063 VNSLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 1122

Query: 3327 HGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNS-KLRGAYCRFCDSAENIV 3503
            HGA+ANLHERLFTLSD SQMH+C KC N+ANVIQR   GG   K+RG +CR C+S E++V
Sbjct: 1123 HGAAANLHERLFTLSDSSQMHICRKCKNMANVIQRPGSGGGGRKIRGPFCRVCESVEDVV 1182

Query: 3504 KVSLPYGAKLLCQELFSMGI 3563
            +V++PYGAKLLCQELFSMGI
Sbjct: 1183 RVNVPYGAKLLCQELFSMGI 1202


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score = 1538 bits (3982), Expect = 0.0
 Identities = 759/1169 (64%), Positives = 914/1169 (78%), Gaps = 8/1169 (0%)
 Frame = +3

Query: 81   EPIN---LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEP 251
            EP+N   L E FL  FCK  S++FF +YGLI+HQI SYN F+++GIQK FD    I V+P
Sbjct: 36   EPVNIHDLGEAFLKDFCKKSSMAFFNQYGLISHQINSYNDFIKNGIQKAFDFFGDILVQP 95

Query: 252  GFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYS 431
            G+DPSKKG+GEW+YA V FGKV LDKP FW G    K+ N      + PRHARLQNMTYS
Sbjct: 96   GYDPSKKGDGEWRYATVKFGKVTLDKPKFWGGAASGKEYN------MLPRHARLQNMTYS 149

Query: 432  ARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVI--SEDERDVVIGRIPVMVKSNMCWL 605
            +RMK+++ LE+YTQ L+ +DKFK+GK+  V K+ +  + D RDV IGR+PVMV S++CW+
Sbjct: 150  SRMKINISLEIYTQKLVSSDKFKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWM 209

Query: 606  NGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRV 785
                K DC+FD+GGYF++KGAEK FIAQEQ+CL RLW+     W V YRS+    KR R+
Sbjct: 210  KDGQKRDCEFDRGGYFLIKGAEKIFIAQEQICLRRLWISNVQGWTVAYRSEV---KRNRL 266

Query: 786  KIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDART 965
             I + +    ED      KVL ++F+S ++P+WI+FFALG+SSDKEIVD I+    D   
Sbjct: 267  IIRLVENSKSEDLKSKE-KVLNVYFLSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTV 325

Query: 966  VNILLATINNAEK--ACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGP 1139
            +NIL A++   +     + F + + AL ++D +I+ T FPP ++IE+ +  YLF  L G 
Sbjct: 326  LNILFASVREVDNDDKWKDFRRGKRALTFLDNEIRKTSFPPADKIEDCLNLYLFASLKGS 385

Query: 1140 KQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARD 1319
            KQK  FLGYMVK L   YTGRRKC+NRDDFRNK               HI HA+R+M + 
Sbjct: 386  KQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAAELLERELKVHIAHARRRMEKA 445

Query: 1320 MQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQ 1499
            +Q+DLYGDR + PI++YLDASIITNGLSRAFSTG W H FK+ E+I+GVVA L R NPLQ
Sbjct: 446  LQRDLYGDRQVHPIEHYLDASIITNGLSRAFSTGAWAHAFKRMERISGVVATLGRANPLQ 505

Query: 1500 MASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLM 1679
              ++LR+TRQQV Y GK GDAR+P+PSHWG++CFLSTPDGE CGL+KN++ TGLVS N  
Sbjct: 506  TMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNLSGTGLVSLNTK 565

Query: 1680 EPLNDKLFDCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIP 1859
            + +   LF CGME LVD+  S S+ GK ++F++G+WVGVC+DSLSFVT+++  RR     
Sbjct: 566  KSITPTLFRCGMENLVDNT-STSFCGKYRIFLDGEWVGVCEDSLSFVTNVRRKRRRNPFL 624

Query: 1860 PQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLVKG-GYNFQSLLXXXXXXXXXX 2036
             QVE+K D +  EVRIFSDAGRILRPLL+VEN+ +I   KG  Y FQSLL          
Sbjct: 625  HQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGT 684

Query: 2037 XXXXXCQTAWGIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQS 2216
                 C+ AW IK+L    +++    Y+HCELD+SFLLGLSCG++PFANHDHARR L+QS
Sbjct: 685  EEEEDCRVAWSIKHLM---EDEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRALFQS 741

Query: 2217 EKHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEY 2396
            +KHS QA+G+S TN N RVDTLS QL+YPQRPLFRTM +DCLG P +     G+L KPE+
Sbjct: 742  QKHSNQAIGFSPTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHAGILPKPEF 801

Query: 2397 FNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVK 2576
            +NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RSYKAEVDN E  E KR K  
Sbjct: 802  YNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSE-KRRKSD 860

Query: 2577 DRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQ 2756
            D ++FGK QSKIGRVDSLDDDGFPYIGANLQ+GDIVIGRCAESG DHSIKLKHTEKG VQ
Sbjct: 861  DAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQ 920

Query: 2757 KVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDI 2936
            KVVL++ND+G+N+AVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDI
Sbjct: 921  KVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDI 980

Query: 2937 VINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSE 3116
            VINPHAFP+RQTPGQLLEAALGKGIA GGS++YATPF+TPS+D IT+QLHRAGFSRWGSE
Sbjct: 981  VINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSE 1040

Query: 3117 RVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKF 3296
            RVYNG++GEMMRSLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KF
Sbjct: 1041 RVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF 1100

Query: 3297 GEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCR 3476
            GEMERDCL+AHGASANLHERLFTLSD SQMHVC KC N+A+VIQRSV GG  K+RG YCR
Sbjct: 1101 GEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGR-KMRGPYCR 1159

Query: 3477 FCDSAENIVKVSLPYGAKLLCQELFSMGI 3563
             C+S ++IV+V++PYGAKLLCQELFSMGI
Sbjct: 1160 VCESFDDIVRVNVPYGAKLLCQELFSMGI 1188


>gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis]
          Length = 1196

 Score = 1534 bits (3971), Expect = 0.0
 Identities = 763/1190 (64%), Positives = 925/1190 (77%), Gaps = 15/1190 (1%)
 Frame = +3

Query: 39   SVSEKASTST---FTDQEPIN-------LSEEFLNKFCKDISVSFFEEYGLINHQIESYN 188
            S  EK S S      D+E  N       L E FL  FCK+ S SFF EYGLI+HQI SYN
Sbjct: 15   SKGEKFSGSVDMDIDDEEEFNELTSIKELGEVFLQNFCKEASTSFFSEYGLISHQINSYN 74

Query: 189  QFVEHGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVFFGKVMLDKPMFWTGEKFSKDD 368
             F+ +G+QK+FDS   + VEPG+DPSKK + EW+YA V FGKV LD P FW G       
Sbjct: 75   DFIRNGVQKVFDSFGDLIVEPGYDPSKKRQNEWRYALVRFGKVTLDLPSFWGGA------ 128

Query: 369  NKEKYLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDE 548
            +K+K   L PRHARLQNMTYS+RMKV+V +EVYTQ L+++DKFK+GKE  + K++IS ++
Sbjct: 129  DKDKEYNLLPRHARLQNMTYSSRMKVNVHIEVYTQKLVRSDKFKTGKEQFLDKEIISTED 188

Query: 549  RDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQS 728
            +DV+IGRIPVMVKS++CW+   +K DC FD GGYF++KGAEK FIAQEQ+C  RLW+   
Sbjct: 189  KDVMIGRIPVMVKSDLCWMKDAEKGDCYFDHGGYFIIKGAEKTFIAQEQICRKRLWITSH 248

Query: 729  PTWLVQYRSDSEVNKR--RRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFAL 902
                V Y+S+ + N+   R  +  ++D    +D       VL ++F+S +IP+WI+FFAL
Sbjct: 249  QNLTVAYQSEVKRNRLILRLAQSGLEDTTVEKD-------VLCVYFLSTEIPVWILFFAL 301

Query: 903  GMSSDKEIVDTIEVDISDARTVNILLATINNAEKACQAFSKEREALKYMDGQIKNTKFPP 1082
            G+SSDKE+VD I+    DA  +NIL  +I  +++ C  F ++++AL +++  IK T+FPP
Sbjct: 302  GVSSDKEVVDLIDFPTDDASILNILFPSIQISDEVCAGFRRQKKALGFVEKHIKKTQFPP 361

Query: 1083 VEEIEEVIGKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXX 1262
             E  EE +  +LFP+L G  QKA FLGYMVK L   +TGRRKC N+DDFRNK        
Sbjct: 362  RESAEECLDMFLFPNLRGMLQKARFLGYMVKCLLQAFTGRRKCNNKDDFRNKRLDLAGEL 421

Query: 1263 XXXXXXXHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFK 1442
                    ++HA+++ A+ +Q+DLYGD+ ++ I++YLDASI+TNGLSRAFSTG W HPFK
Sbjct: 422  LERELRAQVSHARKRTAKALQRDLYGDKGLRQIEFYLDASIVTNGLSRAFSTGAWCHPFK 481

Query: 1443 KSEKIAGVVANLRRLNPLQMASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGE 1622
            K+E+I+GVVAN+ R NPLQ   D+RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE
Sbjct: 482  KTERISGVVANVGRTNPLQTVVDMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 541

Query: 1623 KCGLVKNMAITGLVSTNLMEPLNDKLFDCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCD 1802
             CGLVKN+A TGLVS N+ E L   L D GME L +D ++   + K KVF+NGDW+GVC 
Sbjct: 542  NCGLVKNLAATGLVSINIAESLISTLCDSGMENLANDTYTPLHE-KHKVFLNGDWIGVCA 600

Query: 1803 DSLSFVTDLKHSRRSKRIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLVK- 1979
            DSL+FVT+L+  RR   +P QVEIK D +HGEVRIFSD+GRILRPLL+VEN+ +IK  K 
Sbjct: 601  DSLAFVTELRRKRRRNELPHQVEIKRDEQHGEVRIFSDSGRILRPLLVVENLNRIKPSKE 660

Query: 1980 GGYNFQSLLXXXXXXXXXXXXXXXCQTAWGIKYLFLGEKEQPPLYYTHCELDLSFLLGLS 2159
            G Y F SLL               C+TAWGIKYLF+ E    P+ YTHCELD+SFLL +S
Sbjct: 661  GKYTFHSLLDKGIIELIGAEEEEDCRTAWGIKYLFM-EDGGKPVNYTHCELDMSFLLSVS 719

Query: 2160 CGIIPFANHDHARRVLYQSEKHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDC 2339
            CGIIPFANHDHARRVLYQ++KHSQQA+G+ TTNP+IRVDTLS QL+YPQRPLF+TM SDC
Sbjct: 720  CGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPDIRVDTLSHQLHYPQRPLFQTMTSDC 779

Query: 2340 LGLPAFPQGQNGVLAKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRS 2519
            LG   +   QNG + K E FNGQNAIVAVNVH GYNQEDS+VMNRASLERGMFR+EH+RS
Sbjct: 780  LGKRGYAPSQNGFIPKFECFNGQNAIVAVNVHLGYNQEDSIVMNRASLERGMFRSEHIRS 839

Query: 2520 YKAEVDNMELFEAKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCA 2699
            YKA+VDN E  + KR K  D  +F K  SK GRVDSLDDDGFP+IGANLQ+GDIVIGRCA
Sbjct: 840  YKADVDNKESTD-KRRKPDDCFNFAKIPSKNGRVDSLDDDGFPFIGANLQSGDIVIGRCA 898

Query: 2700 ESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVG 2879
            ESG DHSIKLKHTEKG VQKVVL++ND+G+NFAVVSLRQ+R PILGDKFSSMHGQKGV+G
Sbjct: 899  ESGADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRQPILGDKFSSMHGQKGVLG 958

Query: 2880 LLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIAC--GGSVRYATPFTT 3053
             LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKGIA   G  +R+ATPF+T
Sbjct: 959  YLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALAKGIPLRHATPFST 1018

Query: 3054 PSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTG 3233
            PS+D IT QLH+AGFSRWG+ERVYNG++GEM+RSLIFMGPTFYQRL HM+EDKVK+RNTG
Sbjct: 1019 PSVDAITEQLHKAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMSEDKVKFRNTG 1078

Query: 3234 PVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNI 3413
            PVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSD SQMH+C++C N+
Sbjct: 1079 PVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMHICHRCHNV 1138

Query: 3414 ANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGI 3563
            AN+IQRS+ GG  K+RG YCR C SA++IV+V++PYGAKLLCQELF+MGI
Sbjct: 1139 ANIIQRSLMGGR-KVRGPYCRICKSADDIVRVNVPYGAKLLCQELFTMGI 1187


>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
            arietinum]
          Length = 1199

 Score = 1529 bits (3959), Expect = 0.0
 Identities = 746/1159 (64%), Positives = 926/1159 (79%), Gaps = 2/1159 (0%)
 Frame = +3

Query: 93   LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 272
            L ++ +  FCK  S+ FF+EYGLI+HQI SYNQF   G+Q  FDS   +TV PGFDPSKK
Sbjct: 47   LGDDMVRYFCKKASIMFFDEYGLISHQINSYNQFATSGLQNTFDSFGDLTVTPGFDPSKK 106

Query: 273  GEGE-WKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVS 449
            G+ E ++YA+V FGKV LD+PMFW GE  +++      +K+ PRHARLQ MTY+++MKV+
Sbjct: 107  GDNEHYRYASVKFGKVTLDRPMFWCGEGNTQE------MKMLPRHARLQRMTYASKMKVN 160

Query: 450  VKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDC 629
            V+++VY    +++DKFK+GKE  + +++I ++ R++ IGR+PVMVKS++CW+NG++K DC
Sbjct: 161  VQVQVYIPKKVRSDKFKTGKEEYIDREIIMDENREITIGRLPVMVKSDLCWMNGVEKGDC 220

Query: 630  DFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAP 809
            +FD GGYF++KGAEK FIAQEQ+ L RLWV   P W V Y+S     KR R+ +++ +  
Sbjct: 221  EFDHGGYFLIKGAEKIFIAQEQIFLKRLWVTNVPYWAVAYKSQM---KRNRMVVKLVENT 277

Query: 810  TGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATI 989
            T E    +G KVLT++F+S +IP+W++FFALG++SDK+IVD I+    D R  NIL A+I
Sbjct: 278  TVEG-IKNGEKVLTVYFLSVEIPVWLLFFALGVTSDKQIVDLIDYGEGDGRIQNILFASI 336

Query: 990  NNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYM 1169
              A++ C+ F + + AL Y++ ++K  +FPP E I+E +  Y+FP++ G  +KA +L YM
Sbjct: 337  READEKCEQFRRGKNALLYIEERVKGVQFPPPESIDECLNMYVFPNIKGLNRKARYLAYM 396

Query: 1170 VKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKDLYGDRP 1349
            VK L L YTGRRK +NRDDFRNK               HI HA+++MA+ +Q+DLYGDR 
Sbjct: 397  VKVLLLAYTGRRKTDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRD 456

Query: 1350 MKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQ 1529
            +  I++YLDASIITNGL RAFSTG WTHP+K+ E+I+GVVA L R NPLQ  ++LR+TRQ
Sbjct: 457  VHQIEHYLDASIITNGLQRAFSTGAWTHPYKRMERISGVVATLGRTNPLQTMAELRRTRQ 516

Query: 1530 QVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLNDKLFDC 1709
            QV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKNMA+TGLVSTN+ E +  +LF C
Sbjct: 517  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNMAVTGLVSTNVTESILPQLFAC 576

Query: 1710 GMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQVEIKWDRK 1889
            GME+LVDD  +A    KDKVF+NGDWVGVC DS SFV +L++ RR   +P QVEIK D  
Sbjct: 577  GMEELVDDT-TAVLGNKDKVFLNGDWVGVCSDSASFVAELRNRRRKNELPHQVEIKRDPS 635

Query: 1890 HGEVRIFSDAGRILRPLLIVENIKKIKLVKGG-YNFQSLLXXXXXXXXXXXXXXXCQTAW 2066
              EVRI SDAGRILRPLL+V N+ KIK  K    +FQSLL               C+TAW
Sbjct: 636  QEEVRILSDAGRILRPLLVVSNLLKIKGSKSDPKSFQSLLDNGLIELIGPEEEEDCKTAW 695

Query: 2067 GIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGY 2246
            G+ YLF G++ +  + YTHCELD+SFLLGLSC ++PFANHDHARRVLYQS+KHS QA+G+
Sbjct: 696  GVPYLF-GKEGKSSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGF 754

Query: 2247 STTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAV 2426
            STTNP+IRVD LS QL+YPQ+PLF+TM SDCLG P +  G + +L K E++NGQNAIVAV
Sbjct: 755  STTNPDIRVDALSHQLFYPQKPLFQTMTSDCLGKPGY-LGPSKLLPKSEFYNGQNAIVAV 813

Query: 2427 NVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRVDFGKAQS 2606
            NVH GYNQEDSLVMNRASL+RGMFR+EH+RSYKAE +N E  E KR K +D V+FGK QS
Sbjct: 814  NVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKAENENKESTEKKR-KPEDIVNFGKIQS 872

Query: 2607 KIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEG 2786
            KIGRVDSLDDDGFP++GANLQ GDI+IGRCA+SG DHSIKLKHTE+G VQKVVL++NDEG
Sbjct: 873  KIGRVDSLDDDGFPFVGANLQIGDIIIGRCADSGADHSIKLKHTERGYVQKVVLSSNDEG 932

Query: 2787 QNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTR 2966
            +NFAVVSLRQ+RSP+LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+R
Sbjct: 933  KNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSR 992

Query: 2967 QTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEM 3146
            QTPGQLLEAALGKGIAC GS+R ATPF+T S++ IT+QLHRAGFSRWG+ERVYNG++GEM
Sbjct: 993  QTPGQLLEAALGKGIACVGSLRNATPFSTSSVEAITDQLHRAGFSRWGNERVYNGRTGEM 1052

Query: 3147 MRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA 3326
            +RSLIFMGPTFYQRL+HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+A
Sbjct: 1053 VRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 1112

Query: 3327 HGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVK 3506
            HGASANL+ERLFTLSD SQ+H+C+KC N+ANVI R V GG  K+RG YCRFC+SA++IV 
Sbjct: 1113 HGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGR-KIRGPYCRFCESADDIVV 1171

Query: 3507 VSLPYGAKLLCQELFSMGI 3563
              +PYGAKLLCQELFSMGI
Sbjct: 1172 AHVPYGAKLLCQELFSMGI 1190


>ref|XP_007136942.1| hypothetical protein PHAVU_009G087100g [Phaseolus vulgaris]
            gi|561010029|gb|ESW08936.1| hypothetical protein
            PHAVU_009G087100g [Phaseolus vulgaris]
          Length = 1202

 Score = 1521 bits (3937), Expect = 0.0
 Identities = 738/1160 (63%), Positives = 924/1160 (79%), Gaps = 5/1160 (0%)
 Frame = +3

Query: 99   EEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGE 278
            EE     CK  S+ FFEEYGLI+HQI SYN +   G+Q+ FD    + V PGFDPSKKG 
Sbjct: 49   EEAFRYHCKKFSMLFFEEYGLISHQINSYNHYANVGLQRTFDGFGELVVTPGFDPSKKGA 108

Query: 279  GE-WKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVK 455
             E ++YA+V FGKV LDKPMFW GE  +++       K+ PRHARLQ MTY++++K+ VK
Sbjct: 109  NEHYRYASVKFGKVTLDKPMFWGGEGNAQE------FKMLPRHARLQRMTYASKIKILVK 162

Query: 456  LEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDF 635
            ++VY    +++DKFK+GKE  + K+++ EDER+++IGR+PVMVKS++CW+NG +K+DC+F
Sbjct: 163  VQVYVPKKVRSDKFKTGKEEYLDKEILKEDEREMIIGRLPVMVKSDLCWMNG-EKDDCEF 221

Query: 636  DQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTG 815
            D GGYF++KGAEK FIAQEQL L RLWV  SP W++ Y+S     KR R+ I++      
Sbjct: 222  DHGGYFLIKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQM---KRNRMVIKLVGNSRN 278

Query: 816  EDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINN 995
            E+   +G   LT++F+S ++P+W++FFALG++SDK++VD I  D  DAR  NILLA++ +
Sbjct: 279  EEGQ-NGDMFLTVYFLSVEVPVWVLFFALGVTSDKDVVDLIGCDNDDARIQNILLASVCD 337

Query: 996  AEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKAVFLGYMVK 1175
            A++ C AF + R A++Y++  IK+ +FPP E IEE +  Y+FP ++G  +KA FL YMVK
Sbjct: 338  ADEKCGAFRRGRNAVQYLEKYIKSVQFPPPESIEECLEMYVFPGISGLNRKARFLAYMVK 397

Query: 1176 YLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKDLYGDRPMK 1355
             L L YTGRRKC+NRDDFRNK               HI HA+++M++ +Q+DLYG+R ++
Sbjct: 398  GLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHIAHARKRMSKALQRDLYGERDVR 457

Query: 1356 PIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASDLRKTRQQV 1535
            PI++YLDASIITNGL RAFSTG W+HP+K+ E+I+GVVAN+ R NPLQ  ++LR+ RQQV
Sbjct: 458  PIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNPLQTMAELRRARQQV 517

Query: 1536 GYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVST---NLMEPLNDKLFD 1706
             Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKNMA+TGLVST   N  E +   L +
Sbjct: 518  QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNMAVTGLVSTDVSNASESILPTLLN 577

Query: 1707 CGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQVEIKWDR 1886
            CGME+LV+D  +     KDKVF+NGDWVGVC DS  FV +L+  RR  ++P QVEIK D+
Sbjct: 578  CGMEELVNDT-TTHMGNKDKVFLNGDWVGVCPDSSWFVAELRSERRKNKLPHQVEIKRDQ 636

Query: 1887 KHGEVRIFSDAGRILRPLLIVENIKKIKLVKGG-YNFQSLLXXXXXXXXXXXXXXXCQTA 2063
               EVRI+SDAGRILRPLL+V N+ +IK  K   Y+F++LL               C TA
Sbjct: 637  SQHEVRIYSDAGRILRPLLVVGNLLRIKRFKSDRYSFRTLLEEGVIELIGPEEEEDCCTA 696

Query: 2064 WGIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALG 2243
            WG++YLF G++ +  + YTHCELD+SFLLGLSC ++PFANHDHARRVLYQS+KHS QA+G
Sbjct: 697  WGVQYLF-GKEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIG 755

Query: 2244 YSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVA 2423
            +ST NPN R+DTLS QL+YPQRPLF+TM SDCLG P  P GQ+ +  K E++NGQNAIVA
Sbjct: 756  FSTLNPNTRIDTLSHQLHYPQRPLFQTMASDCLGKPTSPLGQSKIHPKAEFYNGQNAIVA 815

Query: 2424 VNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRVDFGKAQ 2603
            VNVH GYNQEDSLVMNRASL+RGMFR+EH+RSYK+E+DN +  E KR K +D V+FGK Q
Sbjct: 816  VNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKQSSEKKR-KSEDIVNFGKLQ 874

Query: 2604 SKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDE 2783
            SKIGRVDSLDDDGFPY+GANLQ+GDI+IGRCAESG D+S+KLKHTE+G VQKVVL++NDE
Sbjct: 875  SKIGRVDSLDDDGFPYVGANLQSGDIIIGRCAESGADNSVKLKHTERGYVQKVVLSSNDE 934

Query: 2784 GQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPT 2963
            G+NFA VSLRQ+RSP+LGDKFSSMHGQKGV+G LE QENFPFT QGIVPDIVINPHAFP+
Sbjct: 935  GKNFAAVSLRQVRSPVLGDKFSSMHGQKGVLGFLECQENFPFTRQGIVPDIVINPHAFPS 994

Query: 2964 RQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGE 3143
            RQTPGQLLEAALGKGIACGG +R+ATPF+TPS+D IT+QLHRAGFSRWG+ERVYNG++GE
Sbjct: 995  RQTPGQLLEAALGKGIACGGKLRHATPFSTPSVDAITDQLHRAGFSRWGNERVYNGRTGE 1054

Query: 3144 MMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLL 3323
            M+RSLIFMGPTFYQRL+HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+
Sbjct: 1055 MVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI 1114

Query: 3324 AHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIV 3503
            AHGASANL+ERLFTLSD SQ+H+C+ C N++NVI R V GG  K+RG YCR C+SA++IV
Sbjct: 1115 AHGASANLYERLFTLSDSSQIHICSGCKNVSNVIMRPVSGGR-KVRGPYCRHCESADDIV 1173

Query: 3504 KVSLPYGAKLLCQELFSMGI 3563
               +PYGAKLLCQELFSMGI
Sbjct: 1174 VAHVPYGAKLLCQELFSMGI 1193


>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Glycine max]
          Length = 1205

 Score = 1515 bits (3922), Expect = 0.0
 Identities = 739/1174 (62%), Positives = 926/1174 (78%), Gaps = 11/1174 (0%)
 Frame = +3

Query: 75   DQEPIN------LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPM 236
            D +P N      L E+ +  +CK  S+ FF+EYGLI+HQI S+N FV  G+Q  FDS   
Sbjct: 37   DLDPTNSEILEELGEDMVKYWCKKASMLFFDEYGLISHQINSFNHFVAIGLQNTFDSFGD 96

Query: 237  ITVEPGFDPSKKGEGE-WKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARL 413
            + V PGFDPSKKGE E ++YA+V FGKV LDKPMFW GE  +++       K+ PRHAR+
Sbjct: 97   LVVTPGFDPSKKGENEHFRYASVKFGKVKLDKPMFWGGEGNAQE------FKMLPRHARI 150

Query: 414  QNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSN 593
            Q MTY++++K+ VK++VY    +++DKFK+GKE  + ++++ EDER+++IGR+PVMVKS+
Sbjct: 151  QRMTYASKVKIQVKVQVYVPKKVRSDKFKTGKEEFLDREIMKEDEREIIIGRLPVMVKSD 210

Query: 594  MCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNK 773
            +CW+   +K+D +FD GGYF+VKGAEK FIAQEQL L RLWV  SP W++ Y+S     K
Sbjct: 211  LCWMKDAEKDDDEFDHGGYFIVKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQM---K 267

Query: 774  RRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDIS 953
            R R+ I++      E+   +G   LT++F+S ++P+W++FFALG+SSDKEIVD I     
Sbjct: 268  RNRMVIKLVGNSRSEEVE-NGDMCLTVYFLSVEVPVWVLFFALGVSSDKEIVDLIGCGND 326

Query: 954  DARTVNILLATINNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLN 1133
            D R  NIL A++ +A++ C AF + R A++Y++  +K+ +FPP E ++E +  Y+FP ++
Sbjct: 327  DVRIQNILFASVRDADEKCGAFRRVRNAVQYLEKCVKSVQFPPSESMQECLEMYVFPGIS 386

Query: 1134 GPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMA 1313
            G  +KA FL YMVK L L YTGRRKC+NRDDFRNK               H+ HA+++MA
Sbjct: 387  GLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHVAHARKRMA 446

Query: 1314 RDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNP 1493
            + +Q+DLYGDR ++PI++YLDASIITNGL RAFSTG W+HP+K+ E+I+GVVAN+ R NP
Sbjct: 447  KALQRDLYGDRDVRPIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNP 506

Query: 1494 LQMASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTN 1673
            LQ  ++LR+ RQQV Y GK GDAR+P+PSHWGK+CFL+TPDGE CGLVKN+++TGLVST+
Sbjct: 507  LQTMAELRRARQQVQYTGKVGDARYPHPSHWGKVCFLTTPDGENCGLVKNLSVTGLVSTD 566

Query: 1674 LMEPLND---KLFDCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRR 1844
            + +       KL DCGM++LVDD  S      DKV +NGDWVGVC DS SFV +L+  RR
Sbjct: 567  VTDVTESILLKLVDCGMQELVDDT-STHLGSMDKVLLNGDWVGVCPDSSSFVAELRSRRR 625

Query: 1845 SKRIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLVKGG-YNFQSLLXXXXX 2021
               +P QVEIK D+   EVRI+SDAGRILRPLL+V N+ KIK  K   Y+FQSLL     
Sbjct: 626  RNELPHQVEIKRDQSQHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDRYSFQSLLDKGVI 685

Query: 2022 XXXXXXXXXXCQTAWGIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARR 2201
                      C TAWG++YLF G++ +  + YTHCELD+SFLLGLSC ++PFANHDHARR
Sbjct: 686  ELIGPEEEEDCCTAWGVEYLF-GKEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARR 744

Query: 2202 VLYQSEKHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVL 2381
            VLYQS+KHS QA+G+STTNPNIRVDTLS QL+YPQ+PLFRTM SDCLG P    GQ+ + 
Sbjct: 745  VLYQSQKHSSQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTMTSDCLGKPDHSLGQSKIP 804

Query: 2382 AKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAK 2561
             K E++NGQNAIVAVNVH GYNQEDSLVMNRASL+RGMFR+EH+RSYK+E+DN E  + K
Sbjct: 805  PKAEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESSDKK 864

Query: 2562 RLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTE 2741
            R K +D V+F K QSKIGRVDSLDDDGFPY+GANLQ+GDI+IG+CAESG D+S+KLKHTE
Sbjct: 865  R-KPEDIVNFAKLQSKIGRVDSLDDDGFPYVGANLQSGDIIIGKCAESGADNSVKLKHTE 923

Query: 2742 KGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQG 2921
            +G VQKVVL++NDEG+NFAVVSLRQ+RSP+LGDKFSSMHGQKGV+G LESQENFPFT QG
Sbjct: 924  RGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTRQG 983

Query: 2922 IVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFS 3101
            IVPDIVINPHAFP+RQTPGQLLEAALGKGIACGG ++ ATPF+TPS+D IT QLHRAGFS
Sbjct: 984  IVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGILKQATPFSTPSVDAITEQLHRAGFS 1043

Query: 3102 RWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRF 3281
            RWG+ERVYNG++GEM+RSLIFMGPTFYQRL+HM+EDKVK+RNTGPVHPLTRQPVADRKRF
Sbjct: 1044 RWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRF 1103

Query: 3282 GGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLR 3461
            GG+KFGEMERDCL+AHGASANL+ERLFTLSD SQ+H+C+KC  +ANVI R V GG  K+R
Sbjct: 1104 GGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKKVANVILRPVSGGR-KIR 1162

Query: 3462 GAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGI 3563
            G YCR C+SA++IV   +PYGAKLLCQELFSMGI
Sbjct: 1163 GPYCRHCESADDIVVAHVPYGAKLLCQELFSMGI 1196


>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score = 1512 bits (3914), Expect = 0.0
 Identities = 734/1166 (62%), Positives = 907/1166 (77%), Gaps = 8/1166 (0%)
 Frame = +3

Query: 90   NLSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSK 269
            +L E  +  FC+  + SFFE++GLI+HQ+ SYN F+ HGI +LF SI  I VEPG+DPSK
Sbjct: 43   DLDEGVVKSFCRKAATSFFEQHGLISHQLNSYNNFINHGIHQLFASIGEIIVEPGYDPSK 102

Query: 270  KGE-GEWKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKV 446
            +G+ GEW+ A++ FGKV L++P FWTGEKFS  +  +  L+L P+HARLQNMTY+AR+KV
Sbjct: 103  RGDDGEWQKASLKFGKVNLERPSFWTGEKFSSAEGAKDNLELHPKHARLQNMTYAARIKV 162

Query: 447  SVKLEV-YTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKN 623
               LEV YT+ L++++KF +G    VQ+  +     ++  G++PVMV S++CWL    K 
Sbjct: 163  ETHLEVVYTEGLVRSEKFTTGVSTHVQRTTLKSLSLEINFGKLPVMVNSDLCWLKSTGKK 222

Query: 624  DCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIE--- 794
            DC+FDQGGYF++KGAEK FIAQEQ+CL RLWV + PTW + YR    + KRRR+ ++   
Sbjct: 223  DCEFDQGGYFIIKGAEKTFIAQEQICLKRLWVSKDPTWTISYRP---ITKRRRIYLKLVP 279

Query: 795  -IDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVN 971
             ++ AP GE       K+LT++F   ++P+WI+FFALG  +DKE+V  I++DI D+   N
Sbjct: 280  KVESAPVGE-------KILTVYFSFVEMPIWILFFALGARNDKEVVKMIDMDIEDSAIAN 332

Query: 972  ILLATINNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLNGPKQKA 1151
            ILLA+I++A+   + F K   A+K++   ++  K+PP E +EE    +LFPHL    QKA
Sbjct: 333  ILLASIHDADSKYEGFRKNGSAIKHLKDLMQEGKYPPTESVEEYFQIHLFPHLKSSVQKA 392

Query: 1152 VFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMARDMQKD 1331
             FL YMVK L  CY GRRK +NRDD RNK                I HA+R+M R MQ+D
Sbjct: 393  CFLAYMVKCLLECYKGRRKVDNRDDLRNKRLELAGELLERELRIQIKHAERRMMRSMQRD 452

Query: 1332 LYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMASD 1511
            L   R ++ ID+YLDASIITNGLSRAFSTG W+HP+K+ E+I+G+VA LRR NPLQ  +D
Sbjct: 453  LDKGRDLQTIDHYLDASIITNGLSRAFSTGAWSHPYKRMERISGIVATLRRTNPLQAIAD 512

Query: 1512 LRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLM--EP 1685
            +RKTRQQV Y G+ GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A  GLVST ++  E 
Sbjct: 513  MRKTRQQVSYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTEVLDQEG 572

Query: 1686 LNDKLFDCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKRIPPQ 1865
            L  K  +CGME+L DD  S+   GK K+F++GD VGVC DS SFV+ L+  R+   +P Q
Sbjct: 573  LLKKFRECGMEQLADDT-SSLLDGKHKIFLDGDLVGVCRDSSSFVSMLRRRRQKNEVPHQ 631

Query: 1866 VEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLVKGGYNFQSLLXXXXXXXXXXXXX 2045
            VEIK D+ +GEVR+F+DAGRILRPLL+V N++KI  +K    FQSLL             
Sbjct: 632  VEIKMDQSNGEVRVFADAGRILRPLLVVRNLRKINDLKSHVFFQSLLDVGIVELIGPEEE 691

Query: 2046 XXCQTAWGIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKH 2225
              CQTAWG KYLF+ E E PP+ Y+HCELD SFLLGLSCGIIPFANHDHARRVLYQSEKH
Sbjct: 692  EDCQTAWGTKYLFMAELENPPVKYSHCELDSSFLLGLSCGIIPFANHDHARRVLYQSEKH 751

Query: 2226 SQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNG 2405
            SQQA+G+STT+PNIRVDT S QLYYPQ+PLFRT++SDCLG       + G++  P +FNG
Sbjct: 752  SQQAIGFSTTSPNIRVDTNSHQLYYPQKPLFRTVLSDCLGKLTDSCRRKGIIPLPPFFNG 811

Query: 2406 QNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELFEAKRLKVKDRV 2585
            Q AIVAVNVH GYNQEDSLVMNRASLERGMFR+EHVRSYK++VDN E    K+ K  D +
Sbjct: 812  QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKSDVDNSEAAPVKKFKADDLI 871

Query: 2586 DFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVV 2765
             FGK QSKIGRVDSLD+DGFPY+GANLQTGDIVIG+C  +G DHSIKLKHTE+G VQKV+
Sbjct: 872  SFGKVQSKIGRVDSLDEDGFPYVGANLQTGDIVIGKCTATGVDHSIKLKHTERGMVQKVI 931

Query: 2766 LTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVIN 2945
            L+A+DEG+N+AVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVIN
Sbjct: 932  LSADDEGRNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVIN 991

Query: 2946 PHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVY 3125
            PHAFP+RQTPGQLLEAALGKGIA GG ++YATPF++PS+++IT QLHR GFSRWG+E+VY
Sbjct: 992  PHAFPSRQTPGQLLEAALGKGIALGGGLKYATPFSSPSVEDITAQLHRLGFSRWGAEKVY 1051

Query: 3126 NGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEM 3305
            +G++GE ++SLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEM
Sbjct: 1052 DGRTGEALKSLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEM 1111

Query: 3306 ERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCD 3485
            ERDCL+AHGA+ANLHERLFTLSD SQMH+C KC N+ANVIQR V GG  K+RG YCRFC+
Sbjct: 1112 ERDCLIAHGAAANLHERLFTLSDSSQMHICRKCKNMANVIQRPVFGGR-KVRGPYCRFCE 1170

Query: 3486 SAENIVKVSLPYGAKLLCQELFSMGI 3563
            S E++V+V++PYGAKLLCQELFSMGI
Sbjct: 1171 SVEDVVRVNVPYGAKLLCQELFSMGI 1196


>ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Glycine max]
          Length = 1205

 Score = 1511 bits (3911), Expect = 0.0
 Identities = 745/1177 (63%), Positives = 924/1177 (78%), Gaps = 14/1177 (1%)
 Frame = +3

Query: 75   DQEPIN------LSEEFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPM 236
            D +P N      L E+ +  +CK  S+ FF EYGLI+HQI S+N F+  G+QK F+S   
Sbjct: 34   DLDPTNAEILEELGEDIVKYWCKKASMLFFNEYGLISHQINSFNHFIHTGLQKTFESFGD 93

Query: 237  ITVEPGFDPSKKGEGE-WKYANVFFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARL 413
            + V PGFDPSKKGE E ++YA+V FG V LDKPMFW GE  +++       K+ PRHAR+
Sbjct: 94   LVVTPGFDPSKKGENEHFRYASVKFGNVKLDKPMFWGGEGNAQE------FKMLPRHARI 147

Query: 414  QNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSN 593
            Q MTY++++K+ VK++VY    +++DKFK+GK   + ++V+ EDER+++IGR+PVMVKS+
Sbjct: 148  QRMTYASKVKIQVKVQVYVPKKVRSDKFKTGKAEFLDREVMKEDEREIIIGRLPVMVKSD 207

Query: 594  MCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNK 773
            +CW+   +K D +FD GGYF+VKGAEK FIAQEQL L RLWV  SP W++ Y+S     K
Sbjct: 208  LCWMKEAEKEDDEFDHGGYFIVKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQM---K 264

Query: 774  RRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDIS 953
            R R+ I++     GE+   +G   L ++F+S ++P+W++FFALG+SSDKEIVD I     
Sbjct: 265  RNRMVIKLVGNSRGEEVE-NGDMSLAVYFLSVEVPVWVLFFALGVSSDKEIVDLIGCGND 323

Query: 954  DARTVNILLATINNAEKACQAFSKEREALKYMDGQIKNTKFPPVEEIEEVIGKYLFPHLN 1133
            D R  NIL A++ +A++ C AF + R A++Y++  +K+ +FPP E ++E +  Y+FP ++
Sbjct: 324  DVRIQNILFASVRDADEKCGAFRRGRHAVQYLEKCVKSVQFPPSESMQECLEMYVFPGIS 383

Query: 1134 GPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXXHINHAKRKMA 1313
            G  +KA FL YMVK L L YTGRRKC+NRDDFRNK               HI HA+++MA
Sbjct: 384  GLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHIAHARKRMA 443

Query: 1314 RDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNP 1493
            + +Q+DLYGDR ++PI++YLDASIITNGL RAFSTG W+HP+K+ E+I+GVVAN+ R NP
Sbjct: 444  KALQRDLYGDRDVRPIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNP 503

Query: 1494 LQMASDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTN 1673
            LQ  ++LR+ RQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A+TGLVST+
Sbjct: 504  LQTMAELRRARQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAVTGLVSTD 563

Query: 1674 LM---EPLNDKLFDCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRR 1844
            +    E +  KL DCGME+LVDD  S     KDKV +NGDWVGVC DS SFV +L+  RR
Sbjct: 564  VSAVSEYILPKLLDCGMEELVDDT-STHLGNKDKVLLNGDWVGVCPDSSSFVAELRSRRR 622

Query: 1845 SKRIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLVKGGYN-FQSLLXXXXX 2021
               +P QVEIK D+   EVRI+SDAGRILRPLL+V N+ KIK  K   N FQSLL     
Sbjct: 623  RNELPHQVEIKRDQSQHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDCNSFQSLLDKGVI 682

Query: 2022 XXXXXXXXXXCQTAWGIKYLFLGEKEQPPLYYTHCELDLSFLLGLSCGIIPFANHDHARR 2201
                      C TAWG++YLF G++ +  + YTHCELD+SFLLGLSC ++PFANHDHARR
Sbjct: 683  ELIGPEEEEDCCTAWGVEYLF-GKEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARR 741

Query: 2202 VLYQSEKHSQQALGYSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVL 2381
            VLYQS+KHS QA+G+STTNPNIRVDTLS QL+YPQ+PLFRTM SDCLG P    GQN + 
Sbjct: 742  VLYQSQKHSSQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTMASDCLGKPDNSLGQNKIS 801

Query: 2382 AKP---EYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHVRSYKAEVDNMELF 2552
              P   E++NGQNAIVAVNVH GYNQEDSLVMNRASL+RGMFR+EH+RSYK+E+DN E  
Sbjct: 802  KIPPKAEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESS 861

Query: 2553 EAKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLK 2732
            + KR K +D V+F K QSKIGRVDSLDDDGFPY+GANLQ+GDI+IG+ AESG D+S+KLK
Sbjct: 862  DKKR-KPEDIVNFAKLQSKIGRVDSLDDDGFPYVGANLQSGDIIIGKGAESGADNSVKLK 920

Query: 2733 HTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFT 2912
            HTE+G VQKVVL++NDEG+NFAVVSLRQ+RSP+LGDKFSSMHGQKGV+G LESQENFPFT
Sbjct: 921  HTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFT 980

Query: 2913 HQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRA 3092
             QGIVPDIVINPHAFP+RQTPGQLLEAALGKGIACGG +R ATPF+TPS+D IT QLHRA
Sbjct: 981  RQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGILRQATPFSTPSVDAITEQLHRA 1040

Query: 3093 GFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADR 3272
            GFSRWG+ERVYNG++GEM+RSLIFMGPTFYQRL+HM+EDKVK+RNTGPVHPLTRQPVADR
Sbjct: 1041 GFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADR 1100

Query: 3273 KRFGGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNS 3452
            KRFGG+KFGEMERDCL+AHGASANL+ERLFTLSD SQ+H+C+KC N+ANVI R V GG  
Sbjct: 1101 KRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGR- 1159

Query: 3453 KLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGI 3563
            K+RG YCR C+SA++IV   +PYGAKLLCQELFSMGI
Sbjct: 1160 KIRGPYCRHCESADDIVVAHVPYGAKLLCQELFSMGI 1196