BLASTX nr result

ID: Papaver25_contig00026689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00026689
         (556 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004307878.1| PREDICTED: F-box protein At3g07870-like isof...    65   2e-08
ref|XP_004289627.1| PREDICTED: F-box/kelch-repeat protein At3g06...    57   4e-06

>ref|XP_004307878.1| PREDICTED: F-box protein At3g07870-like isoform 1 [Fragaria vesca
           subsp. vesca] gi|470144468|ref|XP_004307879.1|
           PREDICTED: F-box protein At3g07870-like isoform 2
           [Fragaria vesca subsp. vesca]
          Length = 383

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 37/99 (37%), Positives = 53/99 (53%), Gaps = 9/99 (9%)
 Frame = -1

Query: 394 LVGYCNGLACVK---VAPEHVGTVGAITVFNPIRGESLVLSYLAPGGYIHLCH-----GF 239
           +VG CNG+ C++   V  +         + +PI GE++VL  L   G  H CH     GF
Sbjct: 116 MVGSCNGILCIRYIGVENKKRSNFNTFYLLHPITGETVVLPRLKNAGNPHWCHRYCVYGF 175

Query: 238 GFDSSSHKYK-AVIIFTSKGNDEFVCMVFTLGTNSWRKL 125
           GF   +HKYK  VII  +  + E+  MV T+G+ SWR +
Sbjct: 176 GFSPITHKYKLLVIIHPAPSSCEWKAMVLTVGSKSWRSI 214


>ref|XP_004289627.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria
           vesca subsp. vesca]
          Length = 387

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
 Frame = -1

Query: 397 ELVGYCNGLACVKVAPEHVGTVGAITVFNPIRGESLVL---SYLAPGGYIHLCHGFGFDS 227
           ELVG CNGL CVK  P + G   AI ++NP   +  VL     +    + +  +GFG+D 
Sbjct: 160 ELVGACNGLVCVKY-PCNDGDSKAIMLWNPCTRDYKVLPKPPLVIHSTFSNYVYGFGYDP 218

Query: 226 SSHKYKAVIIFTSKGND--EFVCMVFTLGTNSWRKLTTT 116
           ++  YK +   T   ND  E +  +F+L T SWR +  T
Sbjct: 219 ANDDYKVIWGLTCDSNDAKEIMIHIFSLKTGSWRTIKDT 257


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